>NTAN1_MOUSE (Q64311) Protein N-terminal asparagine amidohydrolase (EC 3.5.1.-)|
           (Protein NH2-terminal asparagine deamidase) (N-terminal
           Asn amidase) (NTN-amidase) (PNAD) (Protein NH2-terminal
           asparagine amidohydrolase) (PNAA)
          Length = 309

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 699 DSEVLLQCSTSPAAEPPHFVETERRIWKYLIENPDWED-AFPKYKPRVFHWTNDGRWSRH 523
           D ++L   STSP AEPPHFVE  R    +L + P  E+  FP  K  ++    DG W + 
Sbjct: 245 DKQILESLSTSPLAEPPHFVEHIRSTLMFLKKFPSPENILFPGNKALLYKKNKDGLWEKI 304

Query: 522 S 520
           S
Sbjct: 305 S 305

>NTAN1_PIG (Q28955) Protein N-terminal asparagine amidohydrolase (EC 3.5.1.-)|
           (Protein NH2-terminal asparagine deamidase) (N-terminal
           Asn amidase) (NTN-amidase) (PNAD) (Protein NH2-terminal
           asparagine amidohydrolase) (PNAA)
          Length = 309

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 699 DSEVLLQCSTSPAAEPPHFVETERRIWKYLIENPD-WEDAFPKYKPRVFHWTNDGRWSRH 523
           D ++L   STSP AEPPHFVE  R    +L + P      FP  K  V+    D  W   
Sbjct: 245 DKQILENLSTSPLAEPPHFVEHIRSTLMFLKKYPSPTNTLFPGNKALVYKKNEDALWKEI 304

Query: 522 S 520
           S
Sbjct: 305 S 305

>NTAN1_HUMAN (Q96AB6) Protein N-terminal asparagine amidohydrolase (EC 3.5.1.-)|
           (Protein NH2-terminal asparagine deamidase) (N-terminal
           Asn amidase) (NTN-amidase) (PNAD) (Protein NH2-terminal
           asparagine amidohydrolase) (PNAA)
          Length = 309

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 699 DSEVLLQCSTSPAAEPPHFVETERRIWKYLIENPD-WEDAFPKYKPRVFHWTNDGRWSRH 523
           D ++L   STSP AEPPHFVE  R    +L ++P      F   K  ++    DG W + 
Sbjct: 245 DKQILENLSTSPLAEPPHFVEHIRSTLMFLKKHPSPAHTLFSGNKALLYKKNEDGLWEKI 304

Query: 522 S 520
           S
Sbjct: 305 S 305

>VGLH_VZVD (P09260) Probable glycoprotein H precursor (Glycoprotein III)|
           (GPIII)
          Length = 841

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
 Frame = -1

Query: 582 FPKYKPRVFHWTNDGRWSRHS*HHHF---PVLSSIGALQAER*QIMVTPALIRSQSFPPF 412
           FPKY    +H+  + R    +    F   PV   +    +     + T  L+   +FPP 
Sbjct: 96  FPKYLLSPYHFKAEHRAPFPAGRFGFLSHPVTPDVSFFDSSFAPYLTTQHLVAFTTFPPN 155

Query: 411 PYTFHLQLSHAFAMGDSRLFGSSVNGCRETGLK---LMH*ARFVCRVVDSLLVHT 256
           P  +HL+ +   A  + R FG S+   R T  K   L H A F     D+L  HT
Sbjct: 156 PLVWHLERAETAATAE-RPFGVSLLPARPTVPKNTILEHKAHFA--TWDALARHT 207

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 638  KLREGYGNT*SRTQTGKTHFQSTSPGSSIGPMMEGGQG 525
            KL E  G+  ++ + GKTH   TS GS +G   + G+G
Sbjct: 1839 KLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEG 1876

>EX7L_SALTY (Q8ZN58) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 449

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +3

Query: 54  QTTIESFEQNTVTKLEYRYFQT---QHCKSPQIKSPDPHPSVHNA*PPRL*PQQVSCMQT 224
           QT +E   Q     LE R  Q    Q C S ++   +P P +H A   R+  QQ+    T
Sbjct: 316 QTALERLRQRMGFALEARIKQANQRQQCVSQRLSQQNPQPRIHRA-QSRI--QQLEYRLT 372

Query: 225 FNPPNRISEVR 257
            N  +R+SE R
Sbjct: 373 ENIRSRLSEQR 383


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,963,634
Number of Sequences: 219361
Number of extensions: 2667203
Number of successful extensions: 6826
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6814
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7422931207
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)