| Clone Name | rbags13h19 |
|---|---|
| Clone Library Name | barley_pub |
>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 84.3 bits (207), Expect = 3e-16 Identities = 39/81 (48%), Positives = 54/81 (66%) Frame = -3 Query: 626 PVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAV 447 P+ AALK++G SV GYCWG K+ E+ K ++++ +SHP VT DD+KEVK PI + Sbjct: 134 PLFAALKKEG-KSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEI 192 Query: 446 LGAETDVMSPPELVKEFEQVL 384 LGA+ D +PP+ V F VL Sbjct: 193 LGAQNDTTTPPKEVYRFVHVL 213
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 65.5 bits (158), Expect = 1e-10 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Frame = -3 Query: 587 VGAAGYCWGAKVVAELAKANE--IQTAVMSHPSFVTVDDIKEV--KCPIAVLGAETDVMS 420 +G GYC+GAK + + A ++HPSFV++++I+ + K PI + AE D + Sbjct: 124 IGVVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIF 183 Query: 419 PPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMIDWFN 243 P L E+ L N + + +F GV+HG+ R + A + E+ L D I WFN Sbjct: 184 PANLRHLTEEKLKDNHA-TYQLDLFSGVAHGFAARGDISIPAVKYAKEKVLLDQIYWFN 241
>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II| Length = 249 Score = 50.8 bits (120), Expect = 3e-06 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = -3 Query: 590 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPE 411 ++G G+CWGAKV+ + HPSF D V CP+ L ++ + + Sbjct: 132 TIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCPVLFLCSKDE---DAK 188 Query: 410 LVKEFEQVLSSNSGIA-HFVKIFPGVSHGW 324 ++KE+E+ +N A + F + HGW Sbjct: 189 IIKEWEEAFKTNPAYAKSSFETFSDMFHGW 218
>RTJK_DROME (P21328) RNA-directed DNA polymerase from mobile element jockey (EC| 2.7.7.49) (Reverse transcriptase) Length = 916 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/74 (25%), Positives = 34/74 (45%) Frame = -3 Query: 500 PSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWT 321 P+ V ++ E IA +T V++ + + +L++ SG+ ++ F + W Sbjct: 661 PTHTPVTEVDEEDVLIATYADDTAVLT------KSKSILAATSGLQEYLDAFQQWAENWN 714 Query: 320 VRYNGEDAAAVKSA 279 VR N E A V A Sbjct: 715 VRINAEKCANVTFA 728
>NXF1_DROME (Q9U1H9) Nuclear RNA export factor 1 (Protein tip-associating)| (Protein small bristles) (DmNXF1) Length = 672 Score = 31.2 bits (69), Expect = 2.6 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = -3 Query: 557 KVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPI---AVLGAETDVM--SPPELVKEFE 393 K+ +AK IQT + F D+K+V CP+ V+GA D+M + P+L Sbjct: 202 KMKVTMAKRYNIQTKALDLSRFHADPDLKQVFCPLFRQNVMGAAIDIMCDNIPDL----- 256 Query: 392 QVLSSNSGIAHFVKIFPGV 336 + L+ N ++ F GV Sbjct: 257 EALNLNDNSISSMEAFKGV 275
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 30.8 bits (68), Expect = 3.4 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Frame = -3 Query: 587 VGAAGYCWGAKVVAELAKAN-EIQTAVMSHPSFV----------TVDDIKEVKCPIAVLG 441 +G G+CWG ++ A N ++ V + V VD ++K P+ L Sbjct: 164 LGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLY 223 Query: 440 AETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTD 261 D P + ++ + FV ++P H + Y A + A++ Sbjct: 224 GGADQGIPVATIDRMKEACRAAGKTCDFV-VYPEAGHAFHADYRPSYRA--EPAQDGWKR 280 Query: 260 MIDWFNK 240 + DWF + Sbjct: 281 LQDWFRQ 287
>METX_MOOTA (Q2RIW8) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 374 Score = 29.6 bits (65), Expect = 7.6 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = -3 Query: 473 KEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSH 330 ++ CP +G +D + PP V+E ++++ G A + +I H Sbjct: 300 RDFPCPCLGIGISSDFLFPPYQVQEIVRMINDGGGHARYAEIDSPYGH 347
>Y2373_BACSK (Q5WFF2) UPF0348 protein ABC2373| Length = 405 Score = 29.6 bits (65), Expect = 7.6 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = -3 Query: 563 GAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEF--EQ 390 GA +V EL A +QTA VT+ + ++C + G+E ++P + EF + Sbjct: 63 GADLVVELPYAYSVQTAERFAEGAVTI--LAALRCSVLNFGSEKGEIAPFYALAEFMNDH 120 Query: 389 VLSSNSGIAHFVKIFPGVSH 330 ++ N + F+K GVS+ Sbjct: 121 QVAFNHHVKQFLK--DGVSY 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,341,010 Number of Sequences: 219361 Number of extensions: 1719663 Number of successful extensions: 4710 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4557 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4707 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)