ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13h19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
2dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 9e-80
3dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 9e-80
4gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
6gb|AY104092.1| Zea mays PCO081688 mRNA sequence 117 5e-23
7dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 3e-15
8gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence 84 6e-13
9emb|Y10983.1|GMP450CP9 Glycine max mRNA for cytochrome P450-like... 46 0.14
10gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete s... 44 0.55
11gb|AC099615.6| Mus musculus chromosome 1, clone RP23-412G3, comp... 42 2.2
12emb|AL645938.9| Mouse DNA sequence from clone RP23-15E24 on chro... 42 2.2
13emb|CR381630.12| Zebrafish DNA sequence from clone CH211-234G24 ... 42 2.2
14ref|XM_956627.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.6
15ref|XM_326600.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.6
16gb|AE007304.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 8.6
17ref|NM_025243.3| Homo sapiens solute carrier family 19, member 3... 40 8.6
18gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome... 40 8.6
19gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, co... 40 8.6
20gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome... 40 8.6
21gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosom... 40 8.6
22emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chro... 40 8.6
23emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chr... 40 8.6
24emb|AL009183.10|HS892F13 Human DNA sequence from clone RP5-892F1... 40 8.6
25emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 40 8.6
26gb|AC164166.2| Mus musculus BAC clone RP23-88C18 from chromosome... 40 8.6
27emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC... 40 8.6
28gb|AE014180.1| Mus musculus piebald deletion region section 8 of... 40 8.6
29gb|AC090639.6| Homo sapiens chromosome 11, clone RP11-1114G3, co... 40 8.6
30emb|CR595614.1| full-length cDNA clone CS0DI040YK24 of Placenta ... 40 8.6
31dbj|AK138648.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 8.6
32dbj|AK161804.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 8.6
33gb|AF283317.1|AF283317 Homo sapiens orphan transporter SLC19A3 (... 40 8.6
34gb|AF322998.1|AF322998 Coryphopterus urospilus NADH dehydrogenas... 40 8.6
35gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosom... 40 8.6
36gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, comple... 40 8.6
37dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 8.6
38gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complet... 40 8.6
39gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Canc... 40 8.6
40emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on ch... 40 8.6
41emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on ch... 40 8.6
42emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chr... 40 8.6
43gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, ... 40 8.6
44gb|AC002418.1|AC002418 Human Chromosome X, complete sequence 40 8.6
45gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, compl... 40 8.6
46gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, comple... 40 8.6
47gb|AC069509.16| Homo sapiens 3 BAC RP11-406M8 (Roswell Park Canc... 40 8.6

>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
           insert sequence
          Length = 1014

 Score =  317 bits (160), Expect = 2e-83
 Identities = 331/388 (85%)
 Strand = Plus / Minus

                                                                       
Query: 227 ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 286
           ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 756 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 697

                                                                       
Query: 287 ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 346
           | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 696 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 637

                                                                       
Query: 347 agatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttga 406
           ||||||||||||||||  |||||||||| || || || |||||||||||||||| ||| |
Sbjct: 636 agatcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttca 577

                                                                       
Query: 407 ccaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttca 466
           ||| |||||||||||||||   |||| ||||||||||||||| ||| || |||||||| |
Sbjct: 576 ccacttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttga 517

                                                                       
Query: 467 cctcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatct 526
           ||||||| |||||||| ||||| |||||||| || ||  |||| || || | ||||||||
Sbjct: 516 cctctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatct 457

                                                                       
Query: 527 cattagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagccccaa 586
           ||| ||||||| |||||||| | || |||||||||||||| ||||||||| |||||||||
Sbjct: 456 catgagctttcactaactctaccaccacctttgcaccccagcaataacctacagccccaa 397

                                       
Query: 587 cactagacgctccttgttcctttagagc 614
            ||||||| ||||||  ||||| |||||
Sbjct: 396 tactagacactcctttctccttcagagc 369



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>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
           insert sequence
          Length = 1127

 Score =  305 bits (154), Expect = 9e-80
 Identities = 328/386 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 cacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctcttt 288
           ||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| 
Sbjct: 938 cacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttg 879

                                                                       
Query: 289 acagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccagggaag 348
           |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||||
Sbjct: 878 acagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaag 819

                                                                       
Query: 349 atcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttgacc 408
           ||||||||||||||  |||||||||| || || || |||||||||||||||| |||  ||
Sbjct: 818 atcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctcc 759

                                                                       
Query: 409 aattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttcacc 468
           | |||||||||||||||   |||| ||||||||||||||| ||| || |||||||| |||
Sbjct: 758 acttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacc 699

                                                                       
Query: 469 tcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctca 528
           ||||| |||||||| ||||| |||||||| || ||  |||| || || | ||||||||||
Sbjct: 698 tctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctca 639

                                                                       
Query: 529 ttagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagccccaaca 588
           | ||||||| |||||||| | || |||||||||||||| ||||||||| ||||||||| |
Sbjct: 638 tgagctttcactaactctaccaccacctttgcaccccagcaataacctacagccccaata 579

                                     
Query: 589 ctagacgctccttgttcctttagagc 614
           |||||| ||||||  ||||| |||||
Sbjct: 578 ctagacactcctttctccttcagagc 553



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>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
           insert sequence
          Length = 1127

 Score =  305 bits (154), Expect = 9e-80
 Identities = 328/386 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 cacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctcttt 288
           ||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| 
Sbjct: 938 cacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttg 879

                                                                       
Query: 289 acagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccagggaag 348
           |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||||
Sbjct: 878 acagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaag 819

                                                                       
Query: 349 atcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttgacc 408
           ||||||||||||||  |||||||||| || || || |||||||||||||||| |||  ||
Sbjct: 818 atcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctcc 759

                                                                       
Query: 409 aattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttcacc 468
           | |||||||||||||||   |||| ||||||||||||||| ||| || |||||||| |||
Sbjct: 758 acttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcatttgacc 699

                                                                       
Query: 469 tcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctca 528
           ||||| |||||||| ||||| |||||||| || ||  |||| || || | ||||||||||
Sbjct: 698 tctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctca 639

                                                                       
Query: 529 ttagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagccccaaca 588
           | ||||||| |||||||| | || |||||||||||||| ||||||||| ||||||||| |
Sbjct: 638 tgagctttcactaactctaccaccacctttgcaccccagcaataacctacagccccaata 579

                                     
Query: 589 ctagacgctccttgttcctttagagc 614
           |||||| ||||||  ||||| |||||
Sbjct: 578 ctagacactcctttctccttcagagc 553



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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                         
Query: 227   ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 286
             |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 66628 ttcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctct 66569

                                                                         
Query: 287   ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 346
             | |||||||| ||||| ||  | || ||||| ||||||||||||||    ||||||||||
Sbjct: 66568 tgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggga 66509

                                    
Query: 347   agatcttgacaaagtgagcaatc 369
             ||||||||||||||||| |||||
Sbjct: 66508 agatcttgacaaagtgaccaatc 66486



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                         
Query: 227   ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 286
             ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 73161 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 73102

                                                                         
Query: 287   ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 346
             | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 73101 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 73042

                             
Query: 347   agatcttgacaaagtg 362
             ||||||||||||||||
Sbjct: 73041 agatcttgacaaagtg 73026



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 385   agaacctgctcgaactccttgaccaattctggtggggacatcacatcagtttcagctcca 444
             |||||||||||||||| ||| |||| |||||||||||||||   |||| |||||||||||
Sbjct: 72353 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 72294

                                        
Query: 445   agtacagcgatggggcatttcacctct 471
             |||| ||| || |||||||| ||||||
Sbjct: 72293 agtatagcaattgggcatttgacctct 72267



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                         
Query: 247   aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 306
             ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 82772 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 82713

                                                                         
Query: 307   ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 366
               ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 82712 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 82653

                
Query: 367   atc 369
             |||
Sbjct: 82652 atc 82650



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                         
Query: 470   cttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctcat 529
             |||| |||||||| ||||| |||||||| || ||  |||| || || | |||||||||||
Sbjct: 72172 ctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctcat 72113

                                            
Query: 530   tagctttcgctaactctgcgactacctttgc 560
              ||||||| |||||||| | || ||||||||
Sbjct: 72112 gagctttcactaactctaccaccacctttgc 72082



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 560   caccccaacaataacctgcagcccc 584
             |||||||||||||||||||||||||
Sbjct: 77323 caccccaacaataacctgcagcccc 77299



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                            
Query: 227      ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 286
                |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 19262553 ttcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctct 19262494

                                                                            
Query: 287      ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 346
                | |||||||| ||||| ||  | || ||||| ||||||||||||||    ||||||||||
Sbjct: 19262493 tgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggga 19262434

                                       
Query: 347      agatcttgacaaagtgagcaatc 369
                ||||||||||||||||| |||||
Sbjct: 19262433 agatcttgacaaagtgaccaatc 19262411



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                            
Query: 227      ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 286
                ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 19269086 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 19269027

                                                                            
Query: 287      ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 346
                | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 19269026 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 19268967

                                
Query: 347      agatcttgacaaagtg 362
                ||||||||||||||||
Sbjct: 19268966 agatcttgacaaagtg 19268951



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                            
Query: 385      agaacctgctcgaactccttgaccaattctggtggggacatcacatcagtttcagctcca 444
                |||||||||||||||| ||| |||| |||||||||||||||   |||| |||||||||||
Sbjct: 19268278 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 19268219

                                           
Query: 445      agtacagcgatggggcatttcacctct 471
                |||| ||| || |||||||| ||||||
Sbjct: 19268218 agtatagcaattgggcatttgacctct 19268192



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                            
Query: 247      aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 306
                ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 19278697 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 19278638

                                                                            
Query: 307      ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 366
                  ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 19278637 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 19278578

                   
Query: 367      atc 369
                |||
Sbjct: 19278577 atc 19278575



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                            
Query: 470      cttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtctggatctcat 529
                |||| |||||||| ||||| |||||||| || ||  |||| || || | |||||||||||
Sbjct: 19268097 ctttcatatcatcaacagtcacaaaagaggggtgacacatcacagcagcctggatctcat 19268038

                                               
Query: 530      tagctttcgctaactctgcgactacctttgc 560
                 ||||||| |||||||| | || ||||||||
Sbjct: 19268037 gagctttcactaactctaccaccacctttgc 19268007



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 560      caccccaacaataacctgcagcccc 584
                |||||||||||||||||||||||||
Sbjct: 19273248 caccccaacaataacctgcagcccc 19273224



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>gb|AY104092.1| Zea mays PCO081688 mRNA sequence
          Length = 1359

 Score =  117 bits (59), Expect = 5e-23
 Identities = 289/365 (79%), Gaps = 3/365 (0%)
 Strand = Plus / Minus

                                                                        
Query: 226  gttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctc 285
            ||||| || ||||||||||| |||||||| | |||||| |  | ||| ||||| ||||||
Sbjct: 1045 gttcattttaggttcttgttgaaccagtcgagcatgtccgcaaaggcttcctcagcgctc 986

                                                                        
Query: 286  tttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggg 345
            || || ||||| ||||| |||    | ||||||||| |||| ||||| |  || ||||||
Sbjct: 985  ttcacggcagctgcatcatcgaggctgtatctcacgctccacccatgcgccacgccaggg 926

                                                                        
Query: 346  aagatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttg 405
            |||| |||||| |||||| ||| |||||||||    || ||  | |||||||| | ||||
Sbjct: 925  aagaccttgacgaagtgaccaacccctgagttcacagaaagggcttgctcgaattgcttg 866

                                                                        
Query: 406  accaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttc 465
            || || |||||||||||| |||||||  | ||||||||||||| || ||| | |||||| 
Sbjct: 865  actaactctggtggggacctcacatccatctcagctccaagtatagagattgagcatttg 806

                                                                        
Query: 466  acctcttttatatcatcgacagtaacaaaagaaggatgcgacataacggctgtct---gg 522
            |||||||| ||||| | ||| |||||||||||||| ||| |||  || || | ||   ||
Sbjct: 805  acctctttgatatcgtagacggtaacaaaagaagggtgcaacagtacagcagccttgagg 746

                                                                        
Query: 523  atctcattagctttcgctaactctgcgactacctttgcaccccaacaataacctgcagcc 582
            | |||||| ||||| || |||||  | || |||||||||||||| ||||| |||||||| 
Sbjct: 745  agctcatttgcttttgccaactccacaacgacctttgcaccccagcaataccctgcagct 686

                 
Query: 583  ccaac 587
            |||||
Sbjct: 685  ccaac 681



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>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
           insert sequence
          Length = 1039

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 265/338 (78%)
 Strand = Plus / Minus

                                                                       
Query: 247 aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 306
           ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 747 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 688

                                                                       
Query: 307 ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 366
             ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 687 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 628

                                                                       
Query: 367 atccctgagttagatgatagaacctgctcgaactccttgaccaattctggtggggacatc 426
           ||| | | |||||  || || | |||||| |||| ||| | ||  |||||||| ||| ||
Sbjct: 627 atctcggggttaggagaaaggatctgctcaaactgctttaacagctctggtggagacgtc 568

                                                                       
Query: 427 acatcagtttcagctccaagtacagcgatggggcatttcacctcttttatatcatcgaca 486
              ||| ||||||| ||||||| ||  || |||||||| || ||||| || |||||||||
Sbjct: 567 ttgtcaatttcagcaccaagtatagaaattgggcatttgacttctttgatgtcatcgaca 508

                                                                       
Query: 487 gtaacaaaagaaggatgcgacataacggctgtctggatctcattagctttcgctaactct 546
           | ||  |||||||| ||   ||  || || | |||||| ||||   ||||  ||||||| 
Sbjct: 507 gcaagtaaagaagggtgtagcaatacagcagcctggatttcatggactttgcctaactcc 448

                                                 
Query: 547 gcgactacctttgcaccccaacaataacctgcagcccc 584
            | |||||||||||||||||||||||||||||||||||
Sbjct: 447 accactacctttgcaccccaacaataacctgcagcccc 410



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>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence
          Length = 1139

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 195/246 (79%)
 Strand = Plus / Minus

                                                                       
Query: 226 gttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctc 285
           ||||| || ||||||||||| |||||||| | |||||| |  | ||| ||||| ||||||
Sbjct: 914 gttcattttaggttcttgttgaaccagtcgagcatgtccgcaaaggcttcctcagcgctc 855

                                                                       
Query: 286 tttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggg 345
           || || ||||| ||||| |||    | ||||||||| |||| ||||| |  || ||||||
Sbjct: 854 ttcacggcagctgcatcatcgaggctgtatctcacgctccacccatgcgccacgccaggg 795

                                                                       
Query: 346 aagatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttg 405
           |||| |||||| |||||| ||| |||||||||    || ||  | |||||||| | ||||
Sbjct: 794 aagaccttgacgaagtgaccaacccctgagttcacagaaagggcttgctcgaattgcttg 735

                                                                       
Query: 406 accaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcatttc 465
           || || |||||||||||| |||||||  | ||||||||||||| || ||| | |||||| 
Sbjct: 734 actaactctggtggggacctcacatccatctcagctccaagtatagagattgagcatttg 675

                 
Query: 466 acctct 471
           ||||||
Sbjct: 674 acctct 669



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 553 acctttgcaccccaacaataacctgcagccccaacactagacgctccttgttcctttaga 612
           |||||||||||||| ||||| |||||||| |||||   |||| |||| |  |||||||||
Sbjct: 596 acctttgcaccccagcaataccctgcagctccaacggcagacactcccttctcctttaga 537

                      
Query: 613 gcagcgataac 623
           || ||||||||
Sbjct: 536 gccgcgataac 526



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>emb|Y10983.1|GMP450CP9 Glycine max mRNA for cytochrome P450-like protein, clone CP9
          Length = 1818

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 229  cacttgaggttcttgttaaacca 251
            |||||||||||||||||||||||
Sbjct: 1551 cacttgaggttcttgttaaacca 1573



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>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
          Length = 129728

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 241   ttgttaaaccagtcaatcatgt 262
             ||||||||||||||||||||||
Sbjct: 89158 ttgttaaaccagtcaatcatgt 89179



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>gb|AC099615.6| Mus musculus chromosome 1, clone RP23-412G3, complete sequence
          Length = 204191

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      accacattttatttagcacaa 27
              |||||||||||||||||||||
Sbjct: 116667 accacattttatttagcacaa 116687



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>emb|AL645938.9| Mouse DNA sequence from clone RP23-15E24 on chromosome 1 Contains the 5'
              end of a novel gene, complete sequence
          Length = 138851

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      accacattttatttagcacaa 27
              |||||||||||||||||||||
Sbjct: 113730 accacattttatttagcacaa 113710



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>emb|CR381630.12| Zebrafish DNA sequence from clone CH211-234G24 in linkage group 18,
             complete sequence
          Length = 152854

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    caatcacacaccaaccagcac 84
             |||||||||||||||||||||
Sbjct: 88634 caatcacacaccaaccagcac 88654



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>ref|XM_956627.1| Neurospora crassa OR74A hypothetical protein (NCU01108.1) partial
           mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 275 cctcggcgctctttacagcagccgcatc 302
           ||||||||||||  ||||||||||||||
Sbjct: 277 cctcggcgctctcaacagcagccgcatc 250



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>ref|XM_326600.1| Neurospora crassa OR74A hypothetical protein (NCU01108.1) partial
           mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 275 cctcggcgctctttacagcagccgcatc 302
           ||||||||||||  ||||||||||||||
Sbjct: 277 cctcggcgctctcaacagcagccgcatc 250



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>gb|AE007304.1| Sinorhizobium meliloti 1021 plasmid pSymA section 110 of 121 of the
            complete plasmid sequence
          Length = 12461

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 36   gttcagcacaagcagaccccggaa 59
            |||||||||||||||| |||||||
Sbjct: 8051 gttcagcacaagcagatcccggaa 8074



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>ref|NM_025243.3| Homo sapiens solute carrier family 19, member 3 (SLC19A3), mRNA
          Length = 3775

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    cacattttatttagcacaat 28
            ||||||||||||||||||||
Sbjct: 3109 cacattttatttagcacaat 3090



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>gb|AC134869.4| Mus musculus BAC clone RP23-137C6 from chromosome 13, complete sequence
          Length = 213473

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 573    acctgcagccccaacactag 592
              ||||||||||||||||||||
Sbjct: 195431 acctgcagccccaacactag 195450



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>gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, complete sequence
          Length = 220629

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   aaaccagtcaatcatgtctg 265
             ||||||||||||||||||||
Sbjct: 37371 aaaccagtcaatcatgtctg 37390



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>gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome 14, complete sequence
          Length = 203640

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    aaaccagtcaatcatgtctg 265
              ||||||||||||||||||||
Sbjct: 113503 aaaccagtcaatcatgtctg 113484



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>gb|AC125350.3| Mus musculus BAC clone RP23-423B11 from chromosome 13, complete sequence
          Length = 205567

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 573    acctgcagccccaacactag 592
              ||||||||||||||||||||
Sbjct: 199924 acctgcagccccaacactag 199905



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>emb|AL603755.4| Human DNA sequence from clone RP11-136G2 on chromosome 6, complete
             sequence
          Length = 167565

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 571   taacctgcagccccaacact 590
             ||||||||||||||||||||
Sbjct: 98601 taacctgcagccccaacact 98582



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>emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chromosome 6, complete
              sequence
          Length = 166517

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    taacctgcagccccaacact 590
              ||||||||||||||||||||
Sbjct: 109097 taacctgcagccccaacact 109116



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>emb|AL009183.10|HS892F13 Human DNA sequence from clone RP5-892F13 on chromosome 1p36.2-36.3
             Contains the TNFRSF9 gene for tumor necrosis factor
             receptor superfamily member 9, complete sequence
          Length = 65848

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   caaaagaaggatgcgacata 510
             ||||||||||||||||||||
Sbjct: 12517 caaaagaaggatgcgacata 12498



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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
              hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 486    agtaacaaaagaaggatgcgacat 509
              ||||||||| ||||||||||||||
Sbjct: 387543 agtaacaaatgaaggatgcgacat 387566



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>gb|AC164166.2| Mus musculus BAC clone RP23-88C18 from chromosome 16, complete sequence
          Length = 140552

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    ctcctcggcgctctttacagcagc 296
              ||||||||||||||||||| ||||
Sbjct: 138617 ctcctcggcgctctttacaacagc 138594



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>emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC contig B13O8
          Length = 80765

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 275   cctcggcgctctttacagcagccgcatc 302
             ||||||||||||  ||||||||||||||
Sbjct: 13956 cctcggcgctctcaacagcagccgcatc 13929



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>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   aaaccagtcaatcatgtctg 265
             ||||||||||||||||||||
Sbjct: 29399 aaaccagtcaatcatgtctg 29418



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>gb|AC090639.6| Homo sapiens chromosome 11, clone RP11-1114G3, complete sequence
          Length = 139604

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   ttcacctcttttatatcatc 482
             ||||||||||||||||||||
Sbjct: 68201 ttcacctcttttatatcatc 68182



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>emb|CR595614.1| full-length cDNA clone CS0DI040YK24 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   cacattttatttagcacaat 28
           ||||||||||||||||||||
Sbjct: 940 cacattttatttagcacaat 921



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>dbj|AK138648.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330093B16 product:unclassifiable, full
            insert sequence
          Length = 2519

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 573  acctgcagccccaacactag 592
            ||||||||||||||||||||
Sbjct: 2309 acctgcagccccaacactag 2290



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>dbj|AK161804.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030445B21 product:HESB like
            domain containing 2, full insert sequence
          Length = 2553

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 573  acctgcagccccaacactag 592
            ||||||||||||||||||||
Sbjct: 1689 acctgcagccccaacactag 1670



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>gb|AF283317.1|AF283317 Homo sapiens orphan transporter SLC19A3 (SLC19A3) mRNA, complete cds
          Length = 3532

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    cacattttatttagcacaat 28
            ||||||||||||||||||||
Sbjct: 2859 cacattttatttagcacaat 2840



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>gb|AF322998.1|AF322998 Coryphopterus urospilus NADH dehydrogenase subunit 2 gene, partial
           cds; mitochondrial gene for mitochondrial product
          Length = 531

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 15  ttatttagcacaatagttagtgtt 38
           ||||||||| ||||||||||||||
Sbjct: 404 ttatttagcgcaatagttagtgtt 381



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>gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosome 10, complete
             sequence
          Length = 180612

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   ttattagttattacaaaagg 209
             ||||||||||||||||||||
Sbjct: 10445 ttattagttattacaaaagg 10464



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>gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, complete sequence
          Length = 137247

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      cacattttatttagcacaat 28
              ||||||||||||||||||||
Sbjct: 103103 cacattttatttagcacaat 103122



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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    cctcttttatatcatcgaca 486
              ||||||||||||||||||||
Sbjct: 577275 cctcttttatatcatcgaca 577256



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>gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complete sequence
          Length = 83996

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   ttcacttgaggttcttgtta 246
             ||||||||||||||||||||
Sbjct: 76162 ttcacttgaggttcttgtta 76143



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>gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166962

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   aaccccagggaagatcttga 355
             ||||||||||||||||||||
Sbjct: 24647 aaccccagggaagatcttga 24628



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>emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on chromosome 2, complete
             sequence
          Length = 131255

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   gaatgacacaggcttattag 196
             ||||||||||||||||||||
Sbjct: 10016 gaatgacacaggcttattag 10035



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>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete
             sequence
          Length = 171570

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   cctgcagccccaacactaga 593
             ||||||||||||||||||||
Sbjct: 35979 cctgcagccccaacactaga 35998



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>emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chromosome 16, complete
             sequence
          Length = 181320

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   ctcctcggcgctctttacagcagc 296
             ||||||||||||||||||| ||||
Sbjct: 29744 ctcctcggcgctctttacaacagc 29721



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>gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    aaacaccataacataaaccc 150
              ||||||||||||||||||||
Sbjct: 110387 aaacaccataacataaaccc 110406



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>gb|AC002418.1|AC002418 Human Chromosome X, complete sequence
          Length = 128915

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   aaacaccataacataaaccc 150
             ||||||||||||||||||||
Sbjct: 60316 aaacaccataacataaaccc 60297



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>gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, complete sequence
          Length = 174202

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    ttattagttattacaaaagg 209
              ||||||||||||||||||||
Sbjct: 137220 ttattagttattacaaaagg 137239



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>gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, complete sequence
          Length = 172271

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    aaaccagtcaatcatgtctg 265
              ||||||||||||||||||||
Sbjct: 150717 aaaccagtcaatcatgtctg 150736



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>gb|AC069509.16| Homo sapiens 3 BAC RP11-406M8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152832

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ggcaccacattttatttagc 23
             ||||||||||||||||||||
Sbjct: 34104 ggcaccacattttatttagc 34085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,252,925
Number of Sequences: 3902068
Number of extensions: 5252925
Number of successful extensions: 82037
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81903
Number of HSP's gapped (non-prelim): 126
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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