ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13h13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479784.1| Oryza sativa (japonica cultivar-group), mRNA 210 4e-51
2ref|XM_479783.1| Oryza sativa (japonica cultivar-group), mRNA 210 4e-51
3dbj|AK061804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
4dbj|AK103042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
5gb|AY107695.1| Zea mays PCO112680 mRNA sequence 125 2e-25
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8ref|NM_117129.2| Arabidopsis thaliana RBP37 (RNA-BINDING PROTEIN... 72 3e-09
9gb|AY078011.1| Arabidopsis thaliana AT4g10610/T4F9_70 mRNA, comp... 72 3e-09
10gb|AY039599.1| Arabidopsis thaliana AT4g10610/T4F9_70 mRNA, comp... 72 3e-09
11emb|BX827479.1|CNS0A2S6 Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
12gb|AY086286.1| Arabidopsis thaliana clone 2343 mRNA, complete se... 72 3e-09
13gb|U44134.1|ATU44134 Arabidopsis thaliana RNA recognition motif-... 66 2e-07
14ref|NM_103013.2| Arabidopsis thaliana CID11; RNA binding / prote... 60 1e-05
15gb|AF375434.1| Arabidopsis thaliana At1g32790 mRNA, complete cds 60 1e-05
16gb|AY089165.1| Arabidopsis thaliana clone 40998 mRNA, complete s... 60 1e-05
17gb|BT002225.1| Arabidopsis thaliana At1g32790/F6N18_9 mRNA, comp... 60 1e-05
18emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, ... 50 0.009
19emb|AL049523.1|ATT4F9 Arabidopsis thaliana DNA chromosome 4, BAC... 50 0.009
20gb|AF109721.1|AF109721 Arabidopsis thaliana RNA-binding protein ... 50 0.009
21gb|AF118222.1|F3H7 Arabidopsis thaliana BAC F3H7 50 0.009
22ref|NM_001036537.1| Arabidopsis thaliana RBP37 (RNA-BINDING PROT... 46 0.14
23gb|AC005741.1| Homo sapiens chromosome 5, BAC clone 147L15 (LBNL... 44 0.57
24emb|AJ408877.1|FRU408877 Fugu rubripes partial vipr2A gene for v... 44 0.57
25gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana... 44 0.57
26ref|NM_001036054.1| Arabidopsis thaliana CID11; RNA binding AT1G... 42 2.2
27gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, co... 42 2.2
28gb|AC139935.5| Mus musculus chromosome 16, clone RP23-383M10, co... 42 2.2
29gb|AC124041.3| Oryctolagus cuniculus clone LB1-44O5, complete se... 42 2.2
30emb|AL391988.14| Human DNA sequence from clone RP11-129M16 on ch... 42 2.2
31emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 42 2.2
32gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, comp... 42 2.2
33gb|AC005832.1| Homo sapiens 12 BAC RPCI11-500M8 (Roswell Park Ca... 42 2.2
34gb|AC109928.4| Homo sapiens BAC clone RP11-755F21 from 4, comple... 42 2.2
35gb|AC026991.9| Homo sapiens, clone RP11-279L11, complete sequence 42 2.2
36gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold 42 2.2
37ref|XM_395016.2| PREDICTED: Apis mellifera similar to CG12254-PA... 42 2.2
38gb|AC005887.3|AC005887 citb_173_i_12, complete sequence 42 2.2
39gb|AC005880.3|AC005880 citb_43_a_11, complete sequence 42 2.2
40emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chr... 42 2.2
41gb|AC132625.3| Mus musculus BAC clone RP23-101M7 from 1, complet... 42 2.2
42gb|AC131673.4| Mus musculus BAC clone RP23-321P21 from 1, comple... 42 2.2
43gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome... 42 2.2
44emb|AL691493.17| Mouse DNA sequence from clone RP23-264D18 on ch... 42 2.2
45gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 8.8
46gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, c... 40 8.8
47gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Canc... 40 8.8
48gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11... 40 8.8
49gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p1... 40 8.8
50ref|NG_000017.2| Homo sapiens protocadherin beta cluster (PCDHB@... 40 8.8
51gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, comp... 40 8.8
52gb|AC121875.2| Mus musculus BAC clone RP24-125O20 from 17, compl... 40 8.8
53gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, comple... 40 8.8
54gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complet... 40 8.8
55emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chr... 40 8.8
56emb|AL353748.13| Human DNA sequence from clone RP11-317B17 on ch... 40 8.8
57emb|AL160264.22| Human DNA sequence from clone RP3-405J24 on chr... 40 8.8
58emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr... 40 8.8
59emb|AL139807.6| Human DNA sequence from clone RP1-49G10 on chrom... 40 8.8
60gb|AY280618.1| Thinopyrum elongatum high-molecular-weight gluten... 40 8.8
61emb|AL021398.1|HS964D12 Human DNA sequence from clone RP5-964D12... 40 8.8
62gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosom... 40 8.8
63gb|BC040647.1| Homo sapiens cDNA clone IMAGE:4794632 40 8.8
64emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in l... 40 8.8
65emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in... 40 8.8
66gb|AC087611.11| Homo sapiens, clone RP11-95G22, complete sequence 40 8.8
67gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complet... 40 8.8
68gb|AC093663.4| Homo sapiens BAC clone RP11-477G18 from 4, comple... 40 8.8
69gb|AC099683.1| Caenorhabditis briggsae cosmid CB046A04, complete... 40 8.8
70gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromoso... 40 8.8
71gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 40 8.8
72emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on ch... 40 8.8
73dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
74gb|AC009205.6|AC009205 Drosophila melanogaster, chromosome 2L, r... 40 8.8
75gb|AC009204.5|AC009204 Drosophila melanogaster, chromosome 2L, r... 40 8.8
76gb|AC011756.5|AC011756 Drosophila melanogaster, chromosome 2L, r... 40 8.8
77emb|BX248401.10| Zebrafish DNA sequence from clone CH211-233P10,... 40 8.8
78gb|AC067889.6|AC067889 Homo sapiens chromosome 17, clone CTD-200... 40 8.8
79gb|AC154345.2| Mus musculus BAC clone RP23-226O12 from chromosom... 40 8.8
80gb|AC143330.4| Mus musculus BAC clone RP23-263D5 from chromosome... 40 8.8
81gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complet... 40 8.8
82gb|AC004765.2| Homo sapiens 12 BAC RPCI11-388A16 (Roswell Park C... 40 8.8
83ref|XM_573471.1| PREDICTED: Rattus norvegicus similar to ribosom... 40 8.8
84gb|AC117415.7| Homo sapiens 3 BAC RP11-43F17 (Roswell Park Cance... 40 8.8
85gb|AC016691.10| Homo sapiens BAC clone RP11-85B19 from 2, comple... 40 8.8
86gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Ca... 40 8.8
87gb|AC008688.7|AC008688 Homo sapiens chromosome 5 clone CTB-60P23... 40 8.8
88gb|AC025436.2|AC025436 Homo sapiens chromosome 5 clone CTC-429E1... 40 8.8
89dbj|AK131079.1| Homo sapiens mRNA for FLJ00276 protein 40 8.8
90gb|AC005534.2|AC005534 Homo sapiens PAC clone RP5-982E9 from 7q3... 40 8.8
91gb|AE003661.3| Drosophila melanogaster chromosome 2L, section 70... 40 8.8
92emb|AL049776.3|CNS00001 Human chromosome 14 DNA sequence BAC R-8... 40 8.8
93dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 8.8
94dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.8
95dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.8
96dbj|AB008824.1| Mus musculus gene for hematopoietic prostaglandi... 40 8.8
97gb|AC005754.1|AC005754 Homo sapiens chromosome 5, BAC clone 34j1... 40 8.8
98gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.8
99gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
100emb|AL954319.10| Human DNA sequence from clone RP11-5D4 on chrom... 40 8.8
101gb|AY552545.2| Uncultured marine gamma proteobacterium EBAC20E09... 40 8.8
102gb|AC003682.1|AC003682 Homo sapiens chromosome 19, overlapping c... 40 8.8
103gb|AC170088.9| Mus musculus BAC RP23-94A1 (Roswell Park Cancer ... 40 8.8
104gb|AC168048.3| Mus musculus BAC clone RP24-335I13 from chromosom... 40 8.8
105emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on ch... 40 8.8 
>ref|XM_479784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1205

 Score =  210 bits (106), Expect = 4e-51
 Identities = 176/198 (88%), Gaps = 1/198 (0%)
 Strand = Plus / Minus

                                                                       
Query: 252 atatcttaatttctctttcacatatgtcgatctctatatataagcagtgccattggcacc 311
           ||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||  |||||
Sbjct: 929 atatcgtaacttctctttcatatatgtctatctctatatataagcagtgccatcagcacc 870

                                                                       
Query: 312 tcctgtacctacaactc-tagttcatcattggccgaggagcacggggacgaacgggagtc 370
           ||||||||||||||| | |||| |||||   | ||||| ||||||||||| |||||||||
Sbjct: 869 tcctgtacctacaacacctagtgcatcagctggcgaggtgcacggggacgcacgggagtc 810

                                                                       
Query: 371 ttagatggactcacccttattggcagggaacccagtataacaccactgcagttgagagca 430
           || || || |||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 809 tttgaggggctcacccttattggcaaggaacccagtatgacaccactgcagttgagagca 750

                             
Query: 431 gctgtagcactttcagcc 448
           || || ||||||||||||
Sbjct: 749 gcagtggcactttcagcc 732



 Score =  115 bits (58), Expect = 2e-22
 Identities = 102/114 (89%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                        
Query: 22   agtagcaaacaagacacagcca-caactgaacaaagacaaaaagtacacgagttttgcct 80
            |||||||||||||||||||| | ||||||||||  ||||||| || || |||||||||||
Sbjct: 1154 agtagcaaacaagacacagcaaacaactgaacagcgacaaaa-gtccaggagttttgcct 1096

                                                                  
Query: 81   tgctgcatccaggacaagagcaacaggcccgcttctaagaagctctatgtgcaa 134
            ||||||||| ||||||| |||  |||||||||||||||||||| ||||||||||
Sbjct: 1095 tgctgcatcaaggacaaaagcgtcaggcccgcttctaagaagcgctatgtgcaa 1042
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>ref|XM_479783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1586

 Score =  210 bits (106), Expect = 4e-51
 Identities = 176/198 (88%), Gaps = 1/198 (0%)
 Strand = Plus / Minus

                                                                        
Query: 252  atatcttaatttctctttcacatatgtcgatctctatatataagcagtgccattggcacc 311
            ||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||  |||||
Sbjct: 1310 atatcgtaacttctctttcatatatgtctatctctatatataagcagtgccatcagcacc 1251

                                                                        
Query: 312  tcctgtacctacaactc-tagttcatcattggccgaggagcacggggacgaacgggagtc 370
            ||||||||||||||| | |||| |||||   | ||||| ||||||||||| |||||||||
Sbjct: 1250 tcctgtacctacaacacctagtgcatcagctggcgaggtgcacggggacgcacgggagtc 1191

                                                                        
Query: 371  ttagatggactcacccttattggcagggaacccagtataacaccactgcagttgagagca 430
            || || || |||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1190 tttgaggggctcacccttattggcaaggaacccagtatgacaccactgcagttgagagca 1131

                              
Query: 431  gctgtagcactttcagcc 448
            || || ||||||||||||
Sbjct: 1130 gcagtggcactttcagcc 1113



 Score =  115 bits (58), Expect = 2e-22
 Identities = 102/114 (89%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                        
Query: 22   agtagcaaacaagacacagcca-caactgaacaaagacaaaaagtacacgagttttgcct 80
            |||||||||||||||||||| | ||||||||||  ||||||| || || |||||||||||
Sbjct: 1535 agtagcaaacaagacacagcaaacaactgaacagcgacaaaa-gtccaggagttttgcct 1477

                                                                  
Query: 81   tgctgcatccaggacaagagcaacaggcccgcttctaagaagctctatgtgcaa 134
            ||||||||| ||||||| |||  |||||||||||||||||||| ||||||||||
Sbjct: 1476 tgctgcatcaaggacaaaagcgtcaggcccgcttctaagaagcgctatgtgcaa 1423
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>dbj|AK061804.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A01, full
           insert sequence
          Length = 1205

 Score =  210 bits (106), Expect = 4e-51
 Identities = 176/198 (88%), Gaps = 1/198 (0%)
 Strand = Plus / Minus

                                                                       
Query: 252 atatcttaatttctctttcacatatgtcgatctctatatataagcagtgccattggcacc 311
           ||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||  |||||
Sbjct: 929 atatcgtaacttctctttcatatatgtctatctctatatataagcagtgccatcagcacc 870

                                                                       
Query: 312 tcctgtacctacaactc-tagttcatcattggccgaggagcacggggacgaacgggagtc 370
           ||||||||||||||| | |||| |||||   | ||||| ||||||||||| |||||||||
Sbjct: 869 tcctgtacctacaacacctagtgcatcagctggcgaggtgcacggggacgcacgggagtc 810

                                                                       
Query: 371 ttagatggactcacccttattggcagggaacccagtataacaccactgcagttgagagca 430
           || || || |||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 809 tttgaggggctcacccttattggcaaggaacccagtatgacaccactgcagttgagagca 750

                             
Query: 431 gctgtagcactttcagcc 448
           || || ||||||||||||
Sbjct: 749 gcagtggcactttcagcc 732



 Score =  115 bits (58), Expect = 2e-22
 Identities = 102/114 (89%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                        
Query: 22   agtagcaaacaagacacagcca-caactgaacaaagacaaaaagtacacgagttttgcct 80
            |||||||||||||||||||| | ||||||||||  ||||||| || || |||||||||||
Sbjct: 1154 agtagcaaacaagacacagcaaacaactgaacagcgacaaaa-gtccaggagttttgcct 1096

                                                                  
Query: 81   tgctgcatccaggacaagagcaacaggcccgcttctaagaagctctatgtgcaa 134
            ||||||||| ||||||| |||  |||||||||||||||||||| ||||||||||
Sbjct: 1095 tgctgcatcaaggacaaaagcgtcaggcccgcttctaagaagcgctatgtgcaa 1042
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>dbj|AK103042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117F04, full
            insert sequence
          Length = 1586

 Score =  202 bits (102), Expect = 1e-48
 Identities = 175/198 (88%), Gaps = 1/198 (0%)
 Strand = Plus / Minus

                                                                        
Query: 252  atatcttaatttctctttcacatatgtcgatctctatatataagcagtgccattggcacc 311
            ||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||  |||||
Sbjct: 1310 atatcgtaacttctctttcatatatgtctatctctatatataagcagtgccatcagcacc 1251

                                                                        
Query: 312  tcctgtacctacaactc-tagttcatcattggccgaggagcacggggacgaacgggagtc 370
            ||||||||||||||| | |||| |||||   | ||||| ||||||||||| || ||||||
Sbjct: 1250 tcctgtacctacaacacctagtgcatcagctggcgaggtgcacggggacgcaccggagtc 1191

                                                                        
Query: 371  ttagatggactcacccttattggcagggaacccagtataacaccactgcagttgagagca 430
            || || || |||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1190 tttgaggggctcacccttattggcaaggaacccagtatgacaccactgcagttgagagca 1131

                              
Query: 431  gctgtagcactttcagcc 448
            || || ||||||||||||
Sbjct: 1130 gcagtggcactttcagcc 1113



 Score =  115 bits (58), Expect = 2e-22
 Identities = 102/114 (89%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                        
Query: 22   agtagcaaacaagacacagcca-caactgaacaaagacaaaaagtacacgagttttgcct 80
            |||||||||||||||||||| | ||||||||||  ||||||| || || |||||||||||
Sbjct: 1535 agtagcaaacaagacacagcaaacaactgaacagcgacaaaa-gtccaggagttttgcct 1477

                                                                  
Query: 81   tgctgcatccaggacaagagcaacaggcccgcttctaagaagctctatgtgcaa 134
            ||||||||| ||||||| |||  |||||||||||||||||||| ||||||||||
Sbjct: 1476 tgctgcatcaaggacaaaagcgtcaggcccgcttctaagaagcgctatgtgcaa 1423
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>gb|AY107695.1| Zea mays PCO112680 mRNA sequence
          Length = 1154

 Score =  125 bits (63), Expect = 2e-25
 Identities = 137/161 (85%), Gaps = 3/161 (1%)
 Strand = Plus / Minus

                                                                       
Query: 287 atatataagcagtgccattggcacctcctgtaccta---caactctagttcatcattggc 343
           |||||||||||||||| |  ||||||||||||||||   || ||||||| |||||   | 
Sbjct: 738 atatataagcagtgccttccgcacctcctgtacctaggacacctctagtgcatcagctgg 679

                                                                       
Query: 344 cgaggagcacggggacgaacgggagtcttagatggactcacccttattggcagggaaccc 403
           ||||| ||||||||||| ||||||||||| || || |||||||||||||||| ||| |||
Sbjct: 678 cgaggcgcacggggacgcacgggagtcttcgaggggctcacccttattggcaaggatccc 619

                                                    
Query: 404 agtataacaccactgcagttgagagcagctgtagcactttc 444
           ||||| || ||||||||||| || ||||| |||||||||||
Sbjct: 618 agtatcacgccactgcagttcagggcagcggtagcactttc 578
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  121 bits (61), Expect = 3e-24
 Identities = 119/137 (86%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                          
Query: 252    atatcttaatttctctttcacatatgtcgatctctatatataagcagtgccattggcacc 311
              ||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||  |||||
Sbjct: 886861 atatcgtaacttctctttcatatatgtctatctctatatataagcagtgccatcagcacc 886920

                                                                          
Query: 312    tcctgtacctacaac-tctagttcatcattggccgaggagcacggggacgaacgggagtc 370
              |||||||||||||||  ||||| |||||   | ||||| ||||||||||| |||||||||
Sbjct: 886921 tcctgtacctacaacacctagtgcatcagctggcgaggtgcacggggacgcacgggagtc 886980

                               
Query: 371    ttagatggactcaccct 387
              || || || ||||||||
Sbjct: 886981 tttgaggggctcaccct 886997



 Score =  115 bits (58), Expect = 2e-22
 Identities = 102/114 (89%), Gaps = 2/114 (1%)
 Strand = Plus / Plus

                                                                          
Query: 22     agtagcaaacaagacacagcca-caactgaacaaagacaaaaagtacacgagttttgcct 80
              |||||||||||||||||||| | ||||||||||  ||||||| || || |||||||||||
Sbjct: 886636 agtagcaaacaagacacagcaaacaactgaacagcgacaaaa-gtccaggagttttgcct 886694

                                                                    
Query: 81     tgctgcatccaggacaagagcaacaggcccgcttctaagaagctctatgtgcaa 134
              ||||||||| ||||||| |||  |||||||||||||||||||| ||||||||||
Sbjct: 886695 tgctgcatcaaggacaaaagcgtcaggcccgcttctaagaagcgctatgtgcaa 886748



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                          
Query: 385    ccttattggcagggaacccagtataacaccactgcagttgagagcagctgtagcactttc 444
              ||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 887083 ccttattggcaaggaacccagtatgacaccactgcagttgagagcagcagtggcactttc 887142

                      
Query: 445    agcctgaa 452
              ||||||||
Sbjct: 887143 agcctgaa 887150
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470F10
          Length = 185294

 Score =  121 bits (61), Expect = 3e-24
 Identities = 119/137 (86%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                         
Query: 252   atatcttaatttctctttcacatatgtcgatctctatatataagcagtgccattggcacc 311
             ||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||  |||||
Sbjct: 49599 atatcgtaacttctctttcatatatgtctatctctatatataagcagtgccatcagcacc 49658

                                                                         
Query: 312   tcctgtacctacaac-tctagttcatcattggccgaggagcacggggacgaacgggagtc 370
             |||||||||||||||  ||||| |||||   | ||||| ||||||||||| |||||||||
Sbjct: 49659 tcctgtacctacaacacctagtgcatcagctggcgaggtgcacggggacgcacgggagtc 49718

                              
Query: 371   ttagatggactcaccct 387
             || || || ||||||||
Sbjct: 49719 tttgaggggctcaccct 49735



 Score =  115 bits (58), Expect = 2e-22
 Identities = 102/114 (89%), Gaps = 2/114 (1%)
 Strand = Plus / Plus

                                                                         
Query: 22    agtagcaaacaagacacagcca-caactgaacaaagacaaaaagtacacgagttttgcct 80
             |||||||||||||||||||| | ||||||||||  ||||||| || || |||||||||||
Sbjct: 49374 agtagcaaacaagacacagcaaacaactgaacagcgacaaaa-gtccaggagttttgcct 49432

                                                                   
Query: 81    tgctgcatccaggacaagagcaacaggcccgcttctaagaagctctatgtgcaa 134
             ||||||||| ||||||| |||  |||||||||||||||||||| ||||||||||
Sbjct: 49433 tgctgcatcaaggacaaaagcgtcaggcccgcttctaagaagcgctatgtgcaa 49486



 Score =  103 bits (52), Expect = 7e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                         
Query: 385   ccttattggcagggaacccagtataacaccactgcagttgagagcagctgtagcactttc 444
             ||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||
Sbjct: 49821 ccttattggcaaggaacccagtatgacaccactgcagttgagagcagcagtggcactttc 49880

                     
Query: 445   agcctgaa 452
             ||||||||
Sbjct: 49881 agcctgaa 49888
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>ref|NM_117129.2| Arabidopsis thaliana RBP37 (RNA-BINDING PROTEIN 37); RNA binding
            AT4G10610 (RBP37) transcript variant AT4G10610.1 mRNA,
            complete cds
          Length = 1454

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agcacggggacgaacgggagtcttagatggactcacccttattggcagggaacccagtat 408
            |||||||| |||||| || ||||| ||||||||||||||||| || |  ||||| || | 
Sbjct: 1086 agcacgggaacgaaccggtgtctttgatggactcacccttatcggtaaagaaccaagaag 1027

                                                    
Query: 409  aacaccactgcagttgagagcagctgtagcactttcagcc 448
             |||||||||||||||||||| ||| | || |||||||||
Sbjct: 1026 gacaccactgcagttgagagccgctatcgcgctttcagcc 987
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>gb|AY078011.1| Arabidopsis thaliana AT4g10610/T4F9_70 mRNA, complete cds
          Length = 1011

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                       
Query: 349 agcacggggacgaacgggagtcttagatggactcacccttattggcagggaacccagtat 408
           |||||||| |||||| || ||||| ||||||||||||||||| || |  ||||| || | 
Sbjct: 987 agcacgggaacgaaccggtgtctttgatggactcacccttatcggtaaagaaccaagaag 928

                                                   
Query: 409 aacaccactgcagttgagagcagctgtagcactttcagcc 448
            |||||||||||||||||||| ||| | || |||||||||
Sbjct: 927 gacaccactgcagttgagagccgctatcgcgctttcagcc 888
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>gb|AY039599.1| Arabidopsis thaliana AT4g10610/T4F9_70 mRNA, complete cds
          Length = 1408

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agcacggggacgaacgggagtcttagatggactcacccttattggcagggaacccagtat 408
            |||||||| |||||| || ||||| ||||||||||||||||| || |  ||||| || | 
Sbjct: 1085 agcacgggaacgaaccggtgtctttgatggactcacccttatcggtaaagaaccaagaag 1026

                                                    
Query: 409  aacaccactgcagttgagagcagctgtagcactttcagcc 448
             |||||||||||||||||||| ||| | || |||||||||
Sbjct: 1025 gacaccactgcagttgagagccgctatcgcgctttcagcc 986
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>emb|BX827479.1|CNS0A2S6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS5ZF02 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1351

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agcacggggacgaacgggagtcttagatggactcacccttattggcagggaacccagtat 408
            |||||||| |||||| || ||||| ||||||||||||||||| || |  ||||| || | 
Sbjct: 1034 agcacgggaacgaaccggtgtctttgatggactcacccttatcggtaaagaaccaagaag 975

                                                    
Query: 409  aacaccactgcagttgagagcagctgtagcactttcagcc 448
             |||||||||||||||||||| ||| | || |||||||||
Sbjct: 974  gacaccactgcagttgagagccgctatcgcgctttcagcc 935
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>gb|AY086286.1| Arabidopsis thaliana clone 2343 mRNA, complete sequence
          Length = 1386

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 349  agcacggggacgaacgggagtcttagatggactcacccttattggcagggaacccagtat 408
            |||||||| |||||| || ||||| ||||||||||||||||| || |  ||||| || | 
Sbjct: 1063 agcacgggaacgaaccggtgtctttgatggactcacccttatcggtaaagaaccaagaag 1004

                                                    
Query: 409  aacaccactgcagttgagagcagctgtagcactttcagcc 448
             |||||||||||||||||||| ||| | || |||||||||
Sbjct: 1003 gacaccactgcagttgagagccgctatcgcgctttcagcc 964
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>gb|U44134.1|ATU44134 Arabidopsis thaliana RNA recognition motif-type RNA-binding protein
            (RBP37) mRNA, complete cds
          Length = 1397

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 349  agcacggggacgaacgggagtcttagatggactcacccttattggcagggaacccagtat 408
            |||||||| |||||| || ||||| ||||||||||||||||| || |  ||||| || | 
Sbjct: 1074 agcacgggaacgaaccggtgtctttgatggactcacccttatcggtaaagaaccaagaag 1015

                                 
Query: 409  aacaccactgcagttgagagc 429
             ||||||||||||||||||||
Sbjct: 1014 gacaccactgcagttgagagc 994
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>ref|NM_103013.2| Arabidopsis thaliana CID11; RNA binding / protein binding AT1G32790
            (CID11) transcript variant AT1G32790.1 mRNA, complete cds
          Length = 1523

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggacgaacgggagtcttagatggactcacccttattggcagggaacccagtataacacca 415
            |||||||| || ||||| || |||||||||||||| || |  ||||| || | ||| |||
Sbjct: 1248 ggacgaacaggcgtctttgaaggactcacccttataggtaaagaaccaagaacaactcca 1189

                              
Query: 416  ctgcagttgagagcagct 433
            ||||||||||||||||||
Sbjct: 1188 ctgcagttgagagcagct 1171
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>gb|AF375434.1| Arabidopsis thaliana At1g32790 mRNA, complete cds
          Length = 1413

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggacgaacgggagtcttagatggactcacccttattggcagggaacccagtataacacca 415
            |||||||| || ||||| || |||||||||||||| || |  ||||| || | ||| |||
Sbjct: 1145 ggacgaacaggcgtctttgaaggactcacccttataggtaaagaaccaagaacaactcca 1086

                              
Query: 416  ctgcagttgagagcagct 433
            ||||||||||||||||||
Sbjct: 1085 ctgcagttgagagcagct 1068
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>gb|AY089165.1| Arabidopsis thaliana clone 40998 mRNA, complete sequence
          Length = 1399

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggacgaacgggagtcttagatggactcacccttattggcagggaacccagtataacacca 415
            |||||||| || ||||| || |||||||||||||| || |  ||||| || | ||| |||
Sbjct: 1155 ggacgaacaggcgtctttgaaggactcacccttataggtaaagaaccaagaacaactcca 1096

                              
Query: 416  ctgcagttgagagcagct 433
            ||||||||||||||||||
Sbjct: 1095 ctgcagttgagagcagct 1078
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>gb|BT002225.1| Arabidopsis thaliana At1g32790/F6N18_9 mRNA, complete cds
          Length = 606

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 356 ggacgaacgggagtcttagatggactcacccttattggcagggaacccagtataacacca 415
           |||||||| || ||||| || |||||||||||||| || |  ||||| || | ||| |||
Sbjct: 578 ggacgaacaggcgtctttgaaggactcacccttataggtaaagaaccaagaacaactcca 519

                             
Query: 416 ctgcagttgagagcagct 433
           ||||||||||||||||||
Sbjct: 518 ctgcagttgagagcagct 501
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>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29
          Length = 199861

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 410    acaccactgcagttgagagcagctgtagcactttcagcctg 450
              |||||||||||||||||||| ||| | || |||||||||||
Sbjct: 191196 acaccactgcagttgagagccgctatcgcgctttcagcctg 191156



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 349    agcacggggacgaacgggagtcttagatggactcaccct 387
              |||||||| |||||| || ||||| ||||||||||||||
Sbjct: 191351 agcacgggaacgaaccggtgtctttgatggactcaccct 191313
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>emb|AL049523.1|ATT4F9 Arabidopsis thaliana DNA chromosome 4, BAC clone  T4F9 (ESSA project)
          Length = 78530

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 410   acaccactgcagttgagagcagctgtagcactttcagcctg 450
             |||||||||||||||||||| ||| | || |||||||||||
Sbjct: 43700 acaccactgcagttgagagccgctatcgcgctttcagcctg 43660



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 349   agcacggggacgaacgggagtcttagatggactcaccct 387
             |||||||| |||||| || ||||| ||||||||||||||
Sbjct: 43855 agcacgggaacgaaccggtgtctttgatggactcaccct 43817
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>gb|AF109721.1|AF109721 Arabidopsis thaliana RNA-binding protein (RBP37) gene, complete cds
          Length = 4524

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 410  acaccactgcagttgagagcagctgtagcactttcagcctg 450
            |||||||||||||||||||| ||| | || |||||||||||
Sbjct: 1633 acaccactgcagttgagagccgctatcgcgctttcagcctg 1593



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 349  agcacggggacgaacgggagtcttagatggactcaccct 387
            |||||||| |||||| || ||||| ||||||||||||||
Sbjct: 1787 agcacgggaacgaaccggtgtctttgatggactcaccct 1749
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>gb|AF118222.1|F3H7 Arabidopsis thaliana BAC F3H7
          Length = 102216

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 410   acaccactgcagttgagagcagctgtagcactttcagcctg 450
             |||||||||||||||||||| ||| | || |||||||||||
Sbjct: 15431 acaccactgcagttgagagccgctatcgcgctttcagcctg 15471



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 349   agcacggggacgaacgggagtcttagatggactcaccct 387
             |||||||| |||||| || ||||| ||||||||||||||
Sbjct: 15276 agcacgggaacgaaccggtgtctttgatggactcaccct 15314
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>ref|NM_001036537.1| Arabidopsis thaliana RBP37 (RNA-BINDING PROTEIN 37); RNA binding
            AT4G10610 (RBP37) transcript variant AT4G10610.2 mRNA,
            complete cds
          Length = 1716

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 349  agcacggggacgaacgggagtcttagatggactcaccct 387
            |||||||| |||||| || ||||| ||||||||||||||
Sbjct: 1240 agcacgggaacgaaccggtgtctttgatggactcaccct 1202



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 410  acaccactgcagttgagagcagctgtagcactttcagcc 448
            |||||||||||||||||||| ||| | || |||||||||
Sbjct: 1085 acaccactgcagttgagagccgctatcgcgctttcagcc 1047
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>gb|AC005741.1| Homo sapiens chromosome 5, BAC clone 147L15 (LBNL H90), complete
             sequence
          Length = 119196

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 160   taatttttctttccccctcctc 181
             ||||||||||||||||||||||
Sbjct: 67635 taatttttctttccccctcctc 67656
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>emb|AJ408877.1|FRU408877 Fugu rubripes partial vipr2A gene for vasoactive intestinal peptide
           receptor, exons 2-13
          Length = 10845

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 585 aacttcatttcccaaaataccctgcg 610
           |||||||||||||||||| |||||||
Sbjct: 953 aacttcatttcccaaaatcccctgcg 928
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>gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome I,
             complete sequence
          Length = 92219

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 413   ccactgcagttgagagcagctgtagcactttcagcctg 450
             ||||||||||||||||||||| | || ||||| |||||
Sbjct: 85453 ccactgcagttgagagcagctattgcgctttccgcctg 85490
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>ref|NM_001036054.1| Arabidopsis thaliana CID11; RNA binding AT1G32790 (CID11) transcript
            variant AT1G32790.2 mRNA, complete cds
          Length = 1744

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 413  ccactgcagttgagagcagct 433
            |||||||||||||||||||||
Sbjct: 1191 ccactgcagttgagagcagct 1171
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>gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, complete sequence
          Length = 219128

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 249    gacatatcttaatttctctttcaca 273
              ||||| |||||||||||||||||||
Sbjct: 158164 gacatttcttaatttctctttcaca 158140
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>gb|AC139935.5| Mus musculus chromosome 16, clone RP23-383M10, complete sequence
          Length = 226328

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   tctaatttttctttccccctc 178
             |||||||||||||||||||||
Sbjct: 55506 tctaatttttctttccccctc 55486
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>gb|AC124041.3| Oryctolagus cuniculus clone LB1-44O5, complete sequence
          Length = 106159

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   catatcttaatttctctttca 271
             |||||||||||||||||||||
Sbjct: 70082 catatcttaatttctctttca 70102
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>emb|AL391988.14| Human DNA sequence from clone RP11-129M16 on chromosome 10 Contains the
             3' end of the SLC18A2 gene for member 2 solute carrier
             family 18 (vesicular monoamine) and the 3' end of gene
             LOC118987, complete sequence
          Length = 104711

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 313   cctgtacctacaactctagttcatc 337
             ||||||||| |||||||||||||||
Sbjct: 93593 cctgtacctccaactctagttcatc 93569
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>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
             complete sequence
          Length = 155592

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 558   acagggaagaagttgcatacacaca 582
             ||||||||||||||||| |||||||
Sbjct: 61539 acagggaagaagttgcagacacaca 61515
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>gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, complete sequence
          Length = 146549

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   accatttctaatttttctttc 172
             |||||||||||||||||||||
Sbjct: 94223 accatttctaatttttctttc 94203
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>gb|AC005832.1| Homo sapiens 12 BAC RPCI11-500M8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 425    agagcagctgtagcactttca 445
              |||||||||||||||||||||
Sbjct: 142790 agagcagctgtagcactttca 142770
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>gb|AC109928.4| Homo sapiens BAC clone RP11-755F21 from 4, complete sequence
          Length = 112353

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 451    aaaattaagaaataaatgaac 471
              |||||||||||||||||||||
Sbjct: 107220 aaaattaagaaataaatgaac 107240
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>gb|AC026991.9| Homo sapiens, clone RP11-279L11, complete sequence
          Length = 169196

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    accatttctaatttttctttc 172
              |||||||||||||||||||||
Sbjct: 131016 accatttctaatttttctttc 131036
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>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 251    catatcttaatttctctttca 271
              |||||||||||||||||||||
Sbjct: 800830 catatcttaatttctctttca 800850
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>ref|XM_395016.2| PREDICTED: Apis mellifera similar to CG12254-PA (LOC411545), mRNA
          Length = 2915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 149 ccaaccatttctaatttttct 169
           |||||||||||||||||||||
Sbjct: 363 ccaaccatttctaatttttct 343
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>gb|AC005887.3|AC005887 citb_173_i_12, complete sequence
          Length = 120578

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 313   cctgtacctacaactctagttcatc 337
             ||||||||| |||||||||||||||
Sbjct: 92817 cctgtacctccaactctagttcatc 92841
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>gb|AC005880.3|AC005880 citb_43_a_11, complete sequence
          Length = 146388

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 313    cctgtacctacaactctagttcatc 337
              ||||||||| |||||||||||||||
Sbjct: 132413 cctgtacctccaactctagttcatc 132389
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>emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 220567

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 249    gacatatcttaatttctctttcaca 273
              ||||| |||||||||||||||||||
Sbjct: 196935 gacatttcttaatttctctttcaca 196911
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>gb|AC132625.3| Mus musculus BAC clone RP23-101M7 from 1, complete sequence
          Length = 183691

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 494   aaatgaaaattaccaccactg 514
             |||||||||||||||||||||
Sbjct: 44691 aaatgaaaattaccaccactg 44671
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>gb|AC131673.4| Mus musculus BAC clone RP23-321P21 from 1, complete sequence
          Length = 262190

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 494    aaatgaaaattaccaccactg 514
              |||||||||||||||||||||
Sbjct: 239462 aaatgaaaattaccaccactg 239442
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>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete
            sequence
          Length = 203314

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 158  tctaatttttctttccccctc 178
            |||||||||||||||||||||
Sbjct: 2033 tctaatttttctttccccctc 2053
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>emb|AL691493.17| Mouse DNA sequence from clone RP23-264D18 on chromosome X, complete
              sequence
          Length = 202742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 589    tcatttcccaaaataccctgc 609
              |||||||||||||||||||||
Sbjct: 132488 tcatttcccaaaataccctgc 132468
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>gb|AC155099.1| Medicago truncatula chromosome 7 BAC clone mth2-144f20, complete
             sequence
          Length = 132371

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 50912 atatcttaatttctctttca 50931
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>gb|AC132899.11| Mus musculus chromosome 15, clone RP24-367P22, complete sequence
          Length = 152183

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ccatttctaatttttctttc 172
             ||||||||||||||||||||
Sbjct: 24039 ccatttctaatttttctttc 24058
to top
>gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211463

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 564    aagaagttgcatacacacat 583
              ||||||||||||||||||||
Sbjct: 123783 aagaagttgcatacacacat 123764
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>gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11.4, complete sequence
          Length = 163215

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   taatttttctttccccctcc 179
             ||||||||||||||||||||
Sbjct: 37115 taatttttctttccccctcc 37134
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>gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p11.4, complete sequence
          Length = 218413

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    taatttttctttccccctcc 179
              ||||||||||||||||||||
Sbjct: 191135 taatttttctttccccctcc 191154
to top
>ref|NG_000017.2| Homo sapiens protocadherin beta cluster (PCDHB@) on chromosome 5
          Length = 257923

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 82727 atatcttaatttctctttca 82708
to top
>gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, complete sequence
          Length = 154218

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 77481 atatcttaatttctctttca 77462
to top
>gb|AC121875.2| Mus musculus BAC clone RP24-125O20 from 17, complete sequence
          Length = 200763

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    tagaagaaaagacatatctt 258
              ||||||||||||||||||||
Sbjct: 140613 tagaagaaaagacatatctt 140594
to top
>gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, complete sequence
          Length = 89862

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 72042 atatcttaatttctctttca 72061
to top
>gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complete sequence
          Length = 188207

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 457  aagaaataaatgaacctcca 476
            ||||||||||||||||||||
Sbjct: 5781 aagaaataaatgaacctcca 5762
to top
>emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chromosome 13 Contains a
              high-mobility group pseudogene, complete sequence
          Length = 162763

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 451    aaaattaagaaataaatgaa 470
              ||||||||||||||||||||
Sbjct: 150456 aaaattaagaaataaatgaa 150475
to top
>emb|AL353748.13| Human DNA sequence from clone RP11-317B17 on chromosome 9 Contains the
              SPIN gene for spindlin, a heterogeneous nuclear
              ribonucleoprotein A1 (HNRPA1) pseudogene and a CpG island,
              complete sequence
          Length = 179155

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 447    cctgaaaattaagaaataaatgaa 470
              |||||||||||| |||||||||||
Sbjct: 103902 cctgaaaattaaaaaataaatgaa 103879
to top
>emb|AL160264.22| Human DNA sequence from clone RP3-405J24 on chromosome 6 Contains the
             FDG2 gene for FGD1 family member 2, the gene for a novel
             protein similar to cytochrome c oxidase subunit VIa
             polypeptide 1 (COX6A1) (COX6A, COX6AL) and  ribosomal
             protein L12  (RPL12) pseudogene, complete sequence
          Length = 89881

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tttttctttccccctcctcc 182
             ||||||||||||||||||||
Sbjct: 21425 tttttctttccccctcctcc 21444
to top
>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 36403 atatcttaatttctctttca 36384
to top
>emb|AL139807.6| Human DNA sequence from clone RP1-49G10 on chromosome 6 Contains part
             of the NEDD9 gene for neural precursor cell expressed
             (developmentally down-regulated) 9, complete sequence
          Length = 40091

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tttttctttccccctcctcc 182
             ||||||||||||||||||||
Sbjct: 29200 tttttctttccccctcctcc 29219
to top
>gb|AY280618.1| Thinopyrum elongatum high-molecular-weight glutenin x-type subunit
            (Glu-1E2-x) gene, complete cds
          Length = 1761

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   gctgcatccaggacaagagcaaca 105
            |||||| |||||||||||||||||
Sbjct: 1506 gctgcaaccaggacaagagcaaca 1529
to top
>emb|AL021398.1|HS964D12 Human DNA sequence from clone RP5-964D12 on chromosome 1q24-25 Contains
              the 5' end of the ASTN gene for astrotactin and the 5' end
              of the gene for a novel protein (KIAA1747, LOC57795),
              complete sequence
          Length = 146963

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 551    tgttacaacagggaagaagttgca 574
              |||||||| |||||||||||||||
Sbjct: 115079 tgttacaaaagggaagaagttgca 115056
to top
>gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosome 13, complete
             sequence
          Length = 182345

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   agacatatcttaatttctctttca 271
             ||||||||||| ||||||||||||
Sbjct: 35753 agacatatctttatttctctttca 35730
to top
>gb|BC040647.1| Homo sapiens cDNA clone IMAGE:4794632
          Length = 3438

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 427 agcagctgtagcactttcagcctg 450
           ||||||||||||||| ||||||||
Sbjct: 713 agcagctgtagcactatcagcctg 736
to top
>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
             the gene for a novel protein (zgc:63880), the 3' end of
             the gene for a novel protein similar to vertebrate KCND2,
             the 5' end of the ing3 gene for inhibitor of growth family
             member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   tgaaaattaagaaataaatg 468
             ||||||||||||||||||||
Sbjct: 93265 tgaaaattaagaaataaatg 93246
to top
>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete
              sequence
          Length = 204925

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    tctaatttttctttccccctcctc 181
              ||||||||||||||||||| ||||
Sbjct: 179932 tctaatttttctttcccccccctc 179909
to top
>gb|AC087611.11| Homo sapiens, clone RP11-95G22, complete sequence
          Length = 104869

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   acctacaactctagttcatcattg 341
             ||||| ||||||||||||||||||
Sbjct: 90586 acctaaaactctagttcatcattg 90563
to top
>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence
          Length = 240957

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     gacacagccacaactgaaca 53
              ||||||||||||||||||||
Sbjct: 122814 gacacagccacaactgaaca 122833
to top
>gb|AC093663.4| Homo sapiens BAC clone RP11-477G18 from 4, complete sequence
          Length = 171745

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   tcagcctgaaaattaagaaa 462
             ||||||||||||||||||||
Sbjct: 19579 tcagcctgaaaattaagaaa 19598
to top
>gb|AC099683.1| Caenorhabditis briggsae cosmid CB046A04, complete sequence
          Length = 102867

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   ttcagcctgaaaattaagaa 461
             ||||||||||||||||||||
Sbjct: 96353 ttcagcctgaaaattaagaa 96372
to top
>gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromosome 7, complete
             sequence
          Length = 196528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   aagaaataaatgaacctcca 476
             ||||||||||||||||||||
Sbjct: 19069 aagaaataaatgaacctcca 19050
to top
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ccatttctaatttttctttc 172
             ||||||||||||||||||||
Sbjct: 59426 ccatttctaatttttctttc 59407
to top
>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete
             sequence
          Length = 184201

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   cagcctgaaaattaagaaat 463
             ||||||||||||||||||||
Sbjct: 82875 cagcctgaaaattaagaaat 82856
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 153      ccatttctaatttttctttc 172
                ||||||||||||||||||||
Sbjct: 19431560 ccatttctaatttttctttc 19431541
to top
>gb|AC009205.6|AC009205 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone
            BACR04C20, complete sequence
          Length = 166918

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tttcagcctgaaaattaaga 460
            ||||||||||||||||||||
Sbjct: 3337 tttcagcctgaaaattaaga 3318
to top
>gb|AC009204.5|AC009204 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone
              BACR03E19, complete sequence
          Length = 167777

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    tttcagcctgaaaattaaga 460
              ||||||||||||||||||||
Sbjct: 138319 tttcagcctgaaaattaaga 138300
to top
>gb|AC011756.5|AC011756 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone
             BACR17A06, complete sequence
          Length = 170546

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   tttcagcctgaaaattaaga 460
             ||||||||||||||||||||
Sbjct: 88905 tttcagcctgaaaattaaga 88886
to top
>emb|BX248401.10| Zebrafish DNA sequence from clone CH211-233P10, complete sequence
          Length = 144874

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 578   acacatgaacttcatttcccaaaa 601
             |||||||||||||||||| |||||
Sbjct: 60993 acacatgaacttcatttcacaaaa 61016
to top
>gb|AC067889.6|AC067889 Homo sapiens chromosome 17, clone CTD-2009B14, complete sequence
          Length = 135356

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 318   acctacaactctagttcatcattg 341
             ||||| ||||||||||||||||||
Sbjct: 52633 acctaaaactctagttcatcattg 52610
to top
>gb|AC154345.2| Mus musculus BAC clone RP23-226O12 from chromosome 16, complete
             sequence
          Length = 169390

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   ttggcacctcctgtacctac 323
             ||||||||||||||||||||
Sbjct: 32615 ttggcacctcctgtacctac 32634
to top
>gb|AC143330.4| Mus musculus BAC clone RP23-263D5 from chromosome 6, complete sequence
          Length = 207749

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    agttgcatacacacatgaac 587
              ||||||||||||||||||||
Sbjct: 116139 agttgcatacacacatgaac 116158
to top
>gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complete sequence
          Length = 211305

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 565    agaagttgcatacacacatg 584
              ||||||||||||||||||||
Sbjct: 138570 agaagttgcatacacacatg 138551
to top
>gb|AC004765.2| Homo sapiens 12 BAC RPCI11-388A16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 150812

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 92417 atatcttaatttctctttca 92436
to top
>ref|XM_573471.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L7-like 1
           (LOC364007), mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 atttttctttccccctcctc 181
           ||||||||||||||||||||
Sbjct: 26  atttttctttccccctcctc 7
to top
>gb|AC117415.7| Homo sapiens 3 BAC RP11-43F17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161090

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     agtagcaaacaagacacagc 41
              ||||||||||||||||||||
Sbjct: 143170 agtagcaaacaagacacagc 143151
to top
>gb|AC016691.10| Homo sapiens BAC clone RP11-85B19 from 2, complete sequence
          Length = 181737

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   aaaattaagaaataaatgaa 470
             ||||||||||||||||||||
Sbjct: 80200 aaaattaagaaataaatgaa 80219
to top
>gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169819

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   accaaccatttctaatttttcttt 171
             ||||||| ||||||||||||||||
Sbjct: 80648 accaaccctttctaatttttcttt 80625
to top
>gb|AC008688.7|AC008688 Homo sapiens chromosome 5 clone CTB-60P23, complete sequence
          Length = 147172

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    atatcttaatttctctttca 271
              ||||||||||||||||||||
Sbjct: 131071 atatcttaatttctctttca 131052
to top
>gb|AC025436.2|AC025436 Homo sapiens chromosome 5 clone CTC-429E15, complete sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    atatcttaatttctctttca 271
              ||||||||||||||||||||
Sbjct: 128517 atatcttaatttctctttca 128498
to top
>dbj|AK131079.1| Homo sapiens mRNA for FLJ00276 protein
          Length = 5772

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  tttttctttccccctcctcc 182
            ||||||||||||||||||||
Sbjct: 2432 tttttctttccccctcctcc 2451
to top
>gb|AC005534.2|AC005534 Homo sapiens PAC clone RP5-982E9 from 7q35-q36, complete sequence
          Length = 158219

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 448    ctgaaaattaagaaataaat 467
              ||||||||||||||||||||
Sbjct: 151186 ctgaaaattaagaaataaat 151205
to top
>gb|AE003661.3| Drosophila melanogaster chromosome 2L, section 70 of 83 of the complete
             sequence
          Length = 265558

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   tttcagcctgaaaattaaga 460
             ||||||||||||||||||||
Sbjct: 54043 tttcagcctgaaaattaaga 54024
to top
>emb|AL049776.3|CNS00001 Human chromosome 14 DNA sequence BAC R-85K15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194385

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 447   cctgaaaattaagaaataaatgaa 470
             ||||||||| ||||||||||||||
Sbjct: 76362 cctgaaaataaagaaataaatgaa 76339
to top
>dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-21E14, complete
              sequence
          Length = 132641

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 427    agcagctgtagcactttcagcctg 450
              ||||||||||||||| ||||||||
Sbjct: 107444 agcagctgtagcactatcagcctg 107467
to top
>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete
            sequence
          Length = 118828

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  gtgccattggcacctcctgt 317
            ||||||||||||||||||||
Sbjct: 3353 gtgccattggcacctcctgt 3372
to top
>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete
            sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  gtgccattggcacctcctgt 317
            ||||||||||||||||||||
Sbjct: 3353 gtgccattggcacctcctgt 3372
to top
>dbj|AB008824.1| Mus musculus gene for hematopoietic prostaglandin D synthase, complete
             cds
          Length = 29716

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   agttgcatacacacatgaac 587
             ||||||||||||||||||||
Sbjct: 15654 agttgcatacacacatgaac 15673
to top
>gb|AC005754.1|AC005754 Homo sapiens chromosome 5, BAC clone 34j15 (LBNL H169), complete
             sequence
          Length = 125927

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   atatcttaatttctctttca 271
             ||||||||||||||||||||
Sbjct: 64214 atatcttaatttctctttca 64233
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    taatttctctttcacatatg 277
              ||||||||||||||||||||
Sbjct: 360261 taatttctctttcacatatg 360242
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 153      ccatttctaatttttctttc 172
                ||||||||||||||||||||
Sbjct: 19442836 ccatttctaatttttctttc 19442817
to top
>emb|AL954319.10| Human DNA sequence from clone RP11-5D4 on chromosome 1, complete sequence
          Length = 186291

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    agttgtgaaatgaaaattac 506
              ||||||||||||||||||||
Sbjct: 178200 agttgtgaaatgaaaattac 178219
to top
>gb|AY552545.2| Uncultured marine gamma proteobacterium EBAC20E09 clone EBAC20E09,
             complete sequence
          Length = 144407

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   ttaatttctctttcacatat 276
             ||||||||||||||||||||
Sbjct: 30271 ttaatttctctttcacatat 30290
to top
>gb|AC003682.1|AC003682 Homo sapiens chromosome 19, overlapping cosmids F18547, F11133, R27945,
             R28830 and R32804, complete sequence
          Length = 153875

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   agttgtgaaatgaaaattac 506
             ||||||||||||||||||||
Sbjct: 87726 agttgtgaaatgaaaattac 87707
to top
>gb|AC170088.9| Mus musculus  BAC RP23-94A1 (Roswell Park Cancer Institute (C57BL/6J
            Female) Mouse BAC Library) complete sequence
          Length = 253441

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 564  aagaagttgcatacacacat 583
            ||||||||||||||||||||
Sbjct: 5914 aagaagttgcatacacacat 5895
to top
>gb|AC168048.3| Mus musculus BAC clone RP24-335I13 from chromosome 16, complete
             sequence
          Length = 163057

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   ttggcacctcctgtacctac 323
             ||||||||||||||||||||
Sbjct: 17266 ttggcacctcctgtacctac 17247
to top
>emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on chromosome X, complete
             sequence
          Length = 205023

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    caaagacaaaaagtacacga 71
             ||||||||||||||||||||
Sbjct: 65412 caaagacaaaaagtacacga 65431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,871,539
Number of Sequences: 3902068
Number of extensions: 7871539
Number of successful extensions: 172934
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 172371
Number of HSP's gapped (non-prelim): 544
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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