>COX1_YARLI (Q9B6E7) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 535

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
 Frame = -2

Query: 559 VGLVMSTKEASTSLSSIIDGPSSLHISRRLAE----ASRTNATASIAAIYLVRLSLAWIT 392
           VGL   T+   TS + +I  P+S+ I   LA       R N TA  A  ++   ++  +T
Sbjct: 300 VGLDSDTRAYFTSATMVIAVPTSIKIFSWLATLYGGTIRLNVTALFALGFIFLFTIGGLT 359

Query: 391 GIILLVSTLIGICLLMNMPLTRDTLLYSNVKID*FVLHMNFHTTAWKFLTVMLGFFLWT 215
           G++L  S L             D   + +  +   V H ++  +     ++  G++LW+
Sbjct: 360 GVVLANSAL-------------DIPFHDSYYV---VAHFHYVLSMGAVFSIFCGWYLWS 402

>Y2912_DESPS (Q6AJ39) UPF0316 protein DP2912|
          Length = 318

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +3

Query: 306 FEYRSVSLVSGMFMSRQIPMSVETRRMIPVIHARLSLTRYIAAIEA 443
           FE  S+   + +F+SR + +S  T R I ++H R ++  ++   EA
Sbjct: 37  FEPASLLYAAMVFLSRVVDVSFGTLRTISIVHGRTTMAFWLGFFEA 82

>KKCC2_MOUSE (Q8C078) Calcium/calmodulin-dependent protein kinase kinase 2 (EC|
           2.7.11.17) (Calcium/calmodulin-dependent protein kinase
           kinase beta) (CaM-kinase kinase beta) (CaM-KK beta)
           (CaMKK beta)
          Length = 588

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 98  HTGSVSIQFSMNDPHSNNMFMLHR-VNSKPRLSVPTVKP 211
           H   V +   ++DP+ ++++M+   VN  P + VPT+KP
Sbjct: 245 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 283

>KKCC2_HUMAN (Q96RR4) Calcium/calmodulin-dependent protein kinase kinase 2 (EC|
           2.7.11.17) (Calcium/calmodulin-dependent protein kinase
           kinase beta) (CaM-kinase kinase beta) (CaM-KK beta)
           (CaMKK beta)
          Length = 588

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 98  HTGSVSIQFSMNDPHSNNMFMLHR-VNSKPRLSVPTVKP 211
           H   V +   ++DP+ ++++M+   VN  P + VPT+KP
Sbjct: 245 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 283

>AT10A_MOUSE (O54827) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)|
           (P-locus fat-associated ATPase)
          Length = 1508

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +3

Query: 60  DYFYLFTEKQEKPIQAVSVYSSQ*MIHIATICLCYTG*TASPDSASLLLNPRVQRKNPSM 239
           D F      QE P+  +S   S        + +C T    SPD     +  R + K+P  
Sbjct: 549 DRFLAIARHQEHPLAHLSPELSDVFDFFIALTICNTVVVTSPDQPRQKVRVRFELKSPVK 608

Query: 240 TVKNF 254
           T+++F
Sbjct: 609 TIEDF 613

>KKCC2_RAT (O88831) Calcium/calmodulin-dependent protein kinase kinase 2 (EC|
           2.7.11.17) (Calcium/calmodulin-dependent protein kinase
           kinase beta) (CaM-kinase kinase beta) (CaM-KK beta)
           (CaMKK beta)
          Length = 587

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 98  HTGSVSIQFSMNDPHSNNMFMLHR-VNSKPRLSVPTVKP 211
           H   V +   ++DP+ ++++M+   VN  P + VPT+KP
Sbjct: 244 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 282

>CLD13_MOUSE (Q9Z0S4) Claudin-13|
          Length = 211

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -2

Query: 412 LSLAWITGIILLVSTLIGICLLMNMPLTRD 323
           LSLAW + ++LL+    GI L +N+P+ RD
Sbjct: 163 LSLAWTSSLLLLLG---GILLCVNIPVCRD 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,294,858
Number of Sequences: 219361
Number of extensions: 1557291
Number of successful extensions: 4147
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4147
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)