>dbj|AK107763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A11, full
           insert sequence
          Length = 1128

 Score =  276 bits (139), Expect = 9e-71
 Identities = 262/303 (86%)
 Strand = Plus / Minus

                                                                       
Query: 358 aatcttgcctccacagacacgaatagaatcgcagaaatctctcttcttgagaaacttctt 417
           ||||||||||||||| ||| | ||||||| |||||||||||||||||| |||||||||||
Sbjct: 908 aatcttgcctccacatacatggatagaattgcagaaatctctcttcttcagaaacttctt 849

                                                                       
Query: 418 gatatcttctagtatgaccggtgtgttttggattatcatcttcttgcacttctgtacgaa 477
           ||||| |||||||||||  ||||  |||||||| |||| |||||||||||| ||||| ||
Sbjct: 848 gatatgttctagtatgattggtgcattttggatgatcaacttcttgcacttttgtacaaa 789

                                                                       
Query: 478 actctctgtattgttgcatcctttcagaagtatctcgattatcttgagctccatttcagg 537
           | | |||| ||||||||||||||||||||||| |||||||||||| |||||||  |||||
Sbjct: 788 attttctgcattgttgcatcctttcagaagtacctcgattatcttaagctccacatcagg 729

                                                                       
Query: 538 gtcttcaagaccagtacgaatctcatcaacaacctcatggcaaagggtgcaagcatgttc 597
            | ||||||| ||||| | ||||||||||| |||||||||||||||  ||||| || |||
Sbjct: 728 attttcaagatcagtaaggatctcatcaaccacctcatggcaaaggtcgcaagaatcttc 669

                                                                       
Query: 598 atgtcctgggaggcgaatgtatgtaacttcctcacaaagacttgctgatacgcaaaattc 657
           ||||| |||||| |||||| |||| ||||  | |||||||||| ||||| | ||||||||
Sbjct: 668 atgtcttgggagacgaatgaatgtcactttgtgacaaagacttactgattcacaaaattc 609

              
Query: 658 ttc 660
           |||
Sbjct: 608 ttc 606

>gb|AY108900.1| Zea mays PCO134597 mRNA sequence
          Length = 965

 Score =  210 bits (106), Expect = 4e-51
 Identities = 250/298 (83%)
 Strand = Plus / Minus

                                                                       
Query: 365 cctccacagacacgaatagaatcgcagaaatctctcttcttgagaaacttcttgatatct 424
           |||||||||||| | ||||||| ||| ||||||||||||| ||| |||||||| ||||  
Sbjct: 911 cctccacagacatggatagaattgcaaaaatctctcttctcgaggaacttcttaatattc 852

                                                                       
Query: 425 tctagtatgaccggtgtgttttggattatcatcttcttgcacttctgtacgaaactctct 484
           || | |||||  ||||  ||||||||||||| | |||||||||| |||||  ||  ||||
Sbjct: 851 tccattatgataggtgcattttggattatcaacctcttgcacttttgtacataatcctct 792

                                                                       
Query: 485 gtattgttgcatcctttcagaagtatctcgattatcttgagctccatttcagggtcttca 544
           | ||| ||||||||||||||||||||||| |||||||| ||||||||  | || ||||||
Sbjct: 791 gcattattgcatcctttcagaagtatctcaattatcttaagctccatgcctggatcttca 732

                                                                       
Query: 545 agaccagtacgaatctcatcaacaacctcatggcaaagggtgcaagcatgttcatgtcct 604
           |||  ||||  || |||||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 731 agattagtaacaacctcatcgacaacctcatggcaaagggtgcaagtatcttcatgtctt 672

                                                                     
Query: 605 gggaggcgaatgtatgtaacttcctcacaaagacttgctgatacgcaaaattcttcag 662
           || || |||||| |||| || ||| |||||| |||||||||| | |||||||||||||
Sbjct: 671 ggaagacgaatgaatgttacctccccacaaaaacttgctgatgcacaaaattcttcag 614

>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0049D13, complete sequence
          Length = 136942

 Score =  123 bits (62), Expect = 8e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                         
Query: 358   aatcttgcctccacagacacgaatagaatcgcagaaatctctcttcttgagaaacttctt 417
             ||||||||||||||| ||| | ||||||| |||||||||||||||||| |||||||||||
Sbjct: 48115 aatcttgcctccacatacatggatagaattgcagaaatctctcttcttcagaaacttctt 48174

                                                               
Query: 418   gatatcttctagtatgaccggtgtgttttggattatcatcttcttgcact 467
             ||||| |||||||||||  ||||  |||||||| |||| |||||||||||
Sbjct: 48175 gatatgttctagtatgattggtgcattttggatgatcaacttcttgcact 48224



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                         
Query: 541   ttcaagaccagtacgaatctcatcaacaacctcatggcaaagggtgcaagcatgttcatg 600
             ||||||| ||||| | ||||||||||| |||||||||||||||  ||||| || ||||||
Sbjct: 50334 ttcaagatcagtaaggatctcatcaaccacctcatggcaaaggtcgcaagaatcttcatg 50393

                                                                         
Query: 601   tcctgggaggcgaatgtatgtaacttcctcacaaagacttgctgatacgcaaaattcttc 660
             || |||||| |||||| |||| ||||  | |||||||||| ||||| | |||||||||||
Sbjct: 50394 tcttgggagacgaatgaatgtcactttgtgacaaagacttactgattcacaaaattcttc 50453



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 482   tctgtattgttgcatcctttcagaagtatctcgattatcttgagct 527
             |||| ||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 48439 tctgcattgttgcatcctttcagaagtacctcgattatcttaagct 48484

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 102/120 (85%)
 Strand = Plus / Plus

                                                                            
Query: 541      ttcaagaccagtacgaatctcatcaacaacctcatggcaaagggtgcaagcatgttcatg 600
                ||||||| ||||| | ||||||||||| |||||||||||||||  ||||| || ||||||
Sbjct: 15521565 ttcaagatcagtaaggatctcatcaaccacctcatggcaaaggtcgcaagaatcttcatg 15521624

                                                                            
Query: 601      tcctgggaggcgaatgtatgtaacttcctcacaaagacttgctgatacgcaaaattcttc 660
                || |||||| |||||| |||| ||||  | |||||||||| ||||| | |||||||||||
Sbjct: 15521625 tcttgggagacgaatgaatgtcactttgtgacaaagacttactgattcacaaaattcttc 15521684

>gb|L10110.1|OCTALPTUB Octopus dofleini alpha-tubulin mRNA, complete cds
          Length = 1539

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 544 aagaccagtacgaatctcatcaac 567
           ||||||||||||||||||||||||
Sbjct: 374 aagaccagtacgaatctcatcaac 351

>gb|AC144796.2| Mus musculus BAC clone RP24-397M4 from chromosome 7, complete sequence
          Length = 140189

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 620   gtaacttcctcacaaagactt 640
             |||||||||||||||||||||
Sbjct: 40547 gtaacttcctcacaaagactt 40567

>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence
          Length = 193890

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 620    gtaacttcctcacaaagactt 640
              |||||||||||||||||||||
Sbjct: 160883 gtaacttcctcacaaagactt 160903

>emb|AL662811.20| Mouse DNA sequence from clone RP23-202E24 on chromosome 11 Contains the
             3' end of a novel gene and a myc induced nuclear antigen
             (Mina) pseudogene, complete sequence
          Length = 226642

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 396   ctctcttcttgagaaacttct 416
             |||||||||||||||||||||
Sbjct: 71192 ctctcttcttgagaaacttct 71172

>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence
          Length = 182898

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 623   acttcctcacaaagacttgct 643
             |||||||||||||||||||||
Sbjct: 22922 acttcctcacaaagacttgct 22942

>gb|AC016576.8| Homo sapiens chromosome 5 clone CTB-51A17, complete sequence
          Length = 202302

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 438    gtgtgttttggattatcatct 458
              |||||||||||||||||||||
Sbjct: 151656 gtgtgttttggattatcatct 151636

>emb|AL929184.7| Zebrafish DNA sequence from clone CH211-125N20, complete sequence
          Length = 168257

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    tgcatgctttccagtggagat 99
             |||||||||||||||||||||
Sbjct: 87361 tgcatgctttccagtggagat 87341

>gb|AC099599.6| Mus musculus chromosome 7, clone RP23-115D8, complete sequence
          Length = 209810

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 620    gtaacttcctcacaaagactt 640
              |||||||||||||||||||||
Sbjct: 199906 gtaacttcctcacaaagactt 199886

>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16,
             complete sequence
          Length = 195410

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    tgcatgctttccagtggagat 99
             |||||||||||||||||||||
Sbjct: 62493 tgcatgctttccagtggagat 62513

>gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosome 17, complete sequence
          Length = 158575

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 623    acttcctcacaaagacttgct 643
              |||||||||||||||||||||
Sbjct: 157843 acttcctcacaaagacttgct 157863

>dbj|AK114458.1| Ciona intestinalis cDNA, clone:cieg002p09, full insert sequence
          Length = 1410

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 556 aatctcatcaacaacctcatg 576
           |||||||||||||||||||||
Sbjct: 234 aatctcatcaacaacctcatg 214

>gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome 17, complete sequence
          Length = 208781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 623    acttcctcacaaagacttgct 643
              |||||||||||||||||||||
Sbjct: 187652 acttcctcacaaagacttgct 187672

>ref|XM_550252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 454 catcttcttgcacttctgtacgaaactctctgtattgttgcatcctttcagaagtatctc 513
           |||||||||||||| ||||||  || | ||||  ||| ||||| |||| |||| ||||||
Sbjct: 834 catcttcttgcactgctgtacataattatctgccttgctgcatgctttgagaaatatctc 775

                   
Query: 514 gattatct 521
           || |||||
Sbjct: 774 gactatct 767

>gb|AC150561.4| Bos taurus  BAC CH240-184G17 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 227834

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    aaatattcaggaagtaaaca 177
              ||||||||||||||||||||
Sbjct: 162060 aaatattcaggaagtaaaca 162079

>ref|XM_418427.1| PREDICTED: Gallus gallus similar to KH domain containing, RNA
           binding, signal transduction associated 3; Sam68-like
           phosphotyrosine protein, T-STAR (LOC420317), mRNA
          Length = 2038

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 tgagaaacttcttgatatcttcta 428
           |||||||||||||||| |||||||
Sbjct: 857 tgagaaacttcttgatttcttcta 834

>gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosome 7, complete sequence
          Length = 204478

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    ctccatttcagggtcttcaa 545
              ||||||||||||||||||||
Sbjct: 171316 ctccatttcagggtcttcaa 171335

>gb|AC135860.4| Mus musculus BAC clone RP24-441J10 from chromosome 7, complete sequence
          Length = 196609

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 526   ctccatttcagggtcttcaa 545
             ||||||||||||||||||||
Sbjct: 20642 ctccatttcagggtcttcaa 20661

>ref|XM_814145.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510431.190) partial mRNA
          Length = 5022

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 517  tatcttgagctccatttcag 536
            ||||||||||||||||||||
Sbjct: 1781 tatcttgagctccatttcag 1762

>ref|XM_790462.1| PREDICTED: Strongylocentrotus purpuratus similar to Tubulin alpha-1
           chain (LOC590875), mRNA
          Length = 723

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 547 accagtacgaatctcatcaacaac 570
           ||||||||||| ||||||||||||
Sbjct: 198 accagtacgaacctcatcaacaac 175

>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete
             sequence
          Length = 169547

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   agacaggcctctttggcctc 341
             ||||||||||||||||||||
Sbjct: 20185 agacaggcctctttggcctc 20204

>gb|AC157512.3| Mus musculus BAC clone RP24-399L6 from chromosome 9, complete sequence
          Length = 148736

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 621    taacttcctcacaaagactt 640
              ||||||||||||||||||||
Sbjct: 114983 taacttcctcacaaagactt 115002

>gb|AC087283.10| Homo sapiens chromosome 15, clone RP11-597G23, complete sequence
          Length = 207548

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    gtaaacaccttttctttctt 190
              ||||||||||||||||||||
Sbjct: 188446 gtaaacaccttttctttctt 188427

>gb|AC078909.7| Homo sapiens chromosome 15, clone RP11-128A17, complete sequence
          Length = 170257

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   gtaaacaccttttctttctt 190
             ||||||||||||||||||||
Sbjct: 58689 gtaaacaccttttctttctt 58670

>emb|BX933315.1| Gallus gallus finished cDNA, clone ChEST193j3
          Length = 1927

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 tgagaaacttcttgatatcttcta 428
           |||||||||||||||| |||||||
Sbjct: 857 tgagaaacttcttgatttcttcta 834

>dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N08, full
           insert sequence
          Length = 1301

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 454 catcttcttgcacttctgtacgaaactctctgtattgttgcatcctttcagaagtatctc 513
           |||||||||||||| ||||||  || | ||||  ||| ||||| |||| |||| ||||||
Sbjct: 834 catcttcttgcactgctgtacataattatctgccttgctgcatgctttgagaaatatctc 775

                   
Query: 514 gattatct 521
           || |||||
Sbjct: 774 gactatct 767

>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
             sequence
          Length = 204206

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   gaaacttcttgatatcttct 427
             ||||||||||||||||||||
Sbjct: 63209 gaaacttcttgatatcttct 63228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,845,391
Number of Sequences: 3902068
Number of extensions: 6845391
Number of successful extensions: 117453
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117362
Number of HSP's gapped (non-prelim): 90
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)