>DYXC1_MOUSE (Q8R368) Dyslexia susceptibility 1 candidate gene 1 protein homolog|
          Length = 420

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 23/85 (27%), Positives = 43/85 (50%)
 Frame = -3

Query: 618 PGIPASVLQRANEKSIDFEANYGKRRCATKDKAICTQEDNFATIKDLFRIVKAGNHKEDE 439
           PG+   ++QR  EKSI  +A   K + AT+ KA+  +ED    + ++ +I      +E+E
Sbjct: 89  PGVDKEMMQRIREKSI-LQAQ-EKAKEATEAKAVAKREDQRYALGEMMKI------EEEE 140

Query: 438 AASLSRIREVQMRARVQAMEA*SSC 364
              +  ++E + +     +EA   C
Sbjct: 141 RKKIEDMKENERKKATSELEAWKEC 165

>MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)|
          Length = 1324

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = -3

Query: 615  GIPASVLQRANEKSIDFEANYGKRRCATKDK 523
            G+P  VLQRA  KS +FEA YGK    T  K
Sbjct: 1254 GLPDYVLQRAVIKSQEFEALYGKNHRKTDHK 1284

>RS17_RALEJ (Q46WF3) 30S ribosomal protein S17|
          Length = 92

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 230 IRSRSKNFHERTRQYRISKMMPIQKGHQAGKRKNWGKSPLIK 355
           +RS+  + H+   QY+    + IQ+G    + K+W  S L++
Sbjct: 46  LRSKKYHAHDEANQYKEGDKVEIQEGRPLSRTKSWVVSRLVE 87

>V245_FOWPV (Q9J4Z5) Putative ankyrin repeat protein FPV245|
          Length = 436

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 260 RTRQYRISKMMPIQKGHQAGKRKNWGKSPLIKWVMQLDYASIACTL 397
           R+  Y I K++ ++KG  A  + N+G SPL       DYA I   L
Sbjct: 166 RSNSYEIIKLL-LEKGAYANVKDNYGNSPLHNAAKYGDYACIKLVL 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,841,231
Number of Sequences: 219361
Number of extensions: 1951067
Number of successful extensions: 4426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4424
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)