ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13f19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009337.1| Triticum aestivum clone wlm4.pk0012.g12:fis, full... 579 e-162
2gb|BT016848.1| Zea mays clone Contig681 mRNA sequence 440 e-120
3gb|AY107381.1| Zea mays PCO061330 mRNA sequence 414 e-112
4dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
5dbj|AK066314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
6ref|XM_475553.1| Oryza sativa (japonica cultivar-group), predic... 385 e-104
7gb|BT017728.1| Zea mays clone EL01N0447H09.c mRNA sequence 331 1e-87
8gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 202 7e-49
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 202 7e-49
10gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome... 202 7e-49
11emb|AJ278988.1|STU278988 Solanum tuberosum partial mRNA for isov... 121 2e-24
12gb|DQ427127.1| Sorghum propinquum locus CDO0580 genomic sequence 92 2e-15
13gb|DQ427126.1| Sorghum bicolor voucher PI585454 locus CDO0580 ge... 92 2e-15
14gb|DQ427125.1| Sorghum bicolor voucher PI267539 locus CDO0580 ge... 92 2e-15
15gb|DQ427124.1| Sorghum bicolor voucher PI267408 locus CDO0580 ge... 92 2e-15
16gb|DQ427123.1| Sorghum bicolor voucher PI221607 locus CDO0580 ge... 92 2e-15
17gb|DQ427122.1| Sorghum bicolor voucher PI152702 locus CDO0580 ge... 92 2e-15
18gb|DQ427121.1| Sorghum bicolor voucher NSL92371 locus CDO0580 ge... 92 2e-15
19gb|DQ427120.1| Sorghum bicolor voucher NSL87666 locus CDO0580 ge... 92 2e-15
20gb|DQ427119.1| Sorghum bicolor voucher NSL77217 locus CDO0580 ge... 92 2e-15
21gb|DQ427118.1| Sorghum bicolor voucher NSL77034 locus CDO0580 ge... 92 2e-15
22gb|DQ427117.1| Sorghum bicolor voucher NSL56174 locus CDO0580 ge... 92 2e-15
23gb|DQ427116.1| Sorghum bicolor voucher NSL56003 locus CDO0580 ge... 92 2e-15
24gb|DQ427115.1| Sorghum bicolor voucher NSL55243 locus CDO0580 ge... 92 2e-15
25gb|DQ427114.1| Sorghum bicolor voucher NSL51365 locus CDO0580 ge... 92 2e-15
26gb|DQ427113.1| Sorghum bicolor voucher NSL51030 locus CDO0580 ge... 92 2e-15
27gb|DQ427112.1| Sorghum bicolor voucher NSL50875 locus CDO0580 ge... 92 2e-15
28gb|DQ427111.1| Sorghum bicolor voucher BTx623 locus CDO0580 geno... 92 2e-15
29gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete seq... 74 4e-10
30emb|AJ010945.1|PSA010945 Pisum sativum mRNA for Isovaleryl-CoA d... 60 7e-06
31emb|AJ010946.1|PSA010946 Pisum sativum abp44/ivdh gene for Isova... 58 3e-05
32ref|NM_114399.3| Arabidopsis thaliana IVD (ISOVALERYL-COA-DEHYDR... 46 0.10
33emb|Y12695.1|ATISOVAL A.thaliana mRNA for isovaleryl-CoA dehydro... 46 0.10
34gb|AY128799.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase... 46 0.10
35gb|AY062567.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase... 46 0.10
36gb|AF160729.1|AF160729 Arabidopsis thaliana isovaleryl-CoA-dehyd... 46 0.10
37gb|AY087286.1| Arabidopsis thaliana clone 33674 mRNA, complete s... 46 0.10
38emb|BX936340.7| Zebrafish DNA sequence from clone CH211-286P18 i... 44 0.40
39emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, B... 44 0.40
40emb|BX957362.26| Zebrafish DNA sequence from clone CH211-122F10 ... 42 1.6
41emb|CR659357.2|CNS0F7QB Tetraodon nigroviridis full-length cDNA 42 1.6
42gb|AY917022.1| Taiwania cryptomerioides voucher NSYSU 62-3B clon... 42 1.6
43gb|AY917021.1| Taiwania cryptomerioides voucher NSYSU 62-3A clon... 42 1.6
44gb|AY917019.1| Taiwania cryptomerioides voucher NSYSU 62-2c clon... 42 1.6
45gb|AY916981.1| Taiwania cryptomerioides voucher NSYSU 45-2A clon... 42 1.6
46gb|AY916952.1| Taiwania cryptomerioides voucher NSYSU 33-2B2 clo... 42 1.6
47gb|AY916950.1| Taiwania cryptomerioides voucher NSYSU 33-2a2 int... 42 1.6
48gb|AY916949.1| Taiwania cryptomerioides voucher NSYSU 33-2C2 clo... 42 1.6
49gb|AY916903.1| Taiwania cryptomerioides voucher NSYSU 24-4C clon... 42 1.6
50gb|AY916896.1| Taiwania cryptomerioides voucher NSYSU 24-2B clon... 42 1.6
51gb|AY916890.1| Taiwania cryptomerioides voucher NSYSU 23-3C clon... 42 1.6
52gb|AY916875.1| Taiwania cryptomerioides voucher NSYSU 7-2C clone... 42 1.6
53gb|AY916854.1| Taiwania cryptomerioides voucher NSYSU 19-3A clon... 42 1.6
54ref|XM_510308.1| PREDICTED: Pan troglodytes LOC453333 (LOC453333... 40 6.2
55gb|AC154827.3| Mus musculus BAC clone RP24-546P18 from chromosom... 40 6.2
56gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Ho... 40 6.2
57gb|BC017202.2| Homo sapiens isovaleryl Coenzyme A dehydrogenase,... 40 6.2
58gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-... 40 6.2
59gb|BT013129.1| Lycopersicon esculentum clone 114421R, mRNA sequence 40 6.2
60ref|NM_002225.2| Homo sapiens isovaleryl Coenzyme A dehydrogenas... 40 6.2
61gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hosp... 40 6.2
62emb|AJ012255.1|LMO012255 Listeria monocytogenes dlt operon 40 6.2
63gb|BT007919.1| Synthetic construct Homo sapiens isovaleryl Coenz... 40 6.2
64gb|BT007145.1| Homo sapiens isovaleryl Coenzyme A dehydrogenase ... 40 6.2
65emb|CR858716.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1339 (from cl... 40 6.2
66gb|AC095351.5| Homo sapiens X BAC RP11-359C4 (Roswell Park Cance... 40 6.2
67dbj|AK122922.1| Homo sapiens cDNA FLJ16602 fis, clone TESTI40078... 40 6.2
68gb|AF078902.1| Sorghum bicolor centromere element pHind12, compl... 40 6.2
69gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid c... 40 6.2
70gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, com... 40 6.2
71gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 40 6.2
72gb|AY892811.1| Synthetic construct Homo sapiens clone FLH022793.... 40 6.2
73gb|AY890339.1| Synthetic construct Homo sapiens clone FLH022797.... 40 6.2
74gb|AY890338.1| Synthetic construct Homo sapiens clone FLH022796.... 40 6.2
75emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 ... 40 6.2
76emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 40 6.2
77emb|CR352252.12| Zebrafish DNA sequence from clone CH211-181P13 ... 40 6.2
78gb|AF070531.1|AF070531 Homo sapiens clone 24764 mRNA sequence 40 6.2
79emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chr... 40 6.2
80gb|M34192.1|HUMICOA Human isovaleryl-coA dehydrogenase (IVD) mRN... 40 6.2 
>gb|BT009337.1| Triticum aestivum clone wlm4.pk0012.g12:fis, full insert mRNA
           sequence
          Length = 1412

 Score =  579 bits (292), Expect = e-162
 Identities = 371/396 (93%), Gaps = 2/396 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaggtntgaganggattggatagaacatcatcaaacattngaacacccggnaaccgtt 60
           |||| || ||||| |||||||||||||||||||||| |||| ||||| | || | | |||
Sbjct: 402 caaaagtatgagaaggattggatagaacatcatcaagcatt-gaacatcaggga-cagtt 345

                                                                       
Query: 61  cactaatggtctaaatcctgctcacctcctccagttagaatatgcactgataagatggct 120
            |||||||||||||||||||||||||||||| |||||||| ||||||||| ||| |||||
Sbjct: 344 gactaatggtctaaatcctgctcacctcctcaagttagaacatgcactgacaagctggct 285

                                                                       
Query: 121 tccagaagaataatttcagncctctttgaacagctcacggccaattatcattcttctgat 180
           |||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 284 tccagaagaataatctcagtcctctttaaacagctcacggccaattatcattcttctgat 225

                                                                       
Query: 181 ctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgcccagttgg 240
           |||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 224 ctcactagtacccgccccaatctcgaacagttttgcatccctcaggagacggccagttgg 165

                                                                       
Query: 241 gtactcatttatgtatccattgccaccaagacactggattgcctcaagtgcaacttgtgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gtactcatttatgtatccattgccaccaagacactggattgcctcaagtgcaacttgtgt 105

                                                                       
Query: 301 tgccctttcagcagcaaagaggattactcctgcacaatccttgcgatcaactttgccatt 360
           |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 104 tgccctttcagcagcaaagaggatcactcctgcacaatccttacggtcaactttgccatt 45

                                               
Query: 361 atcacagtccctagcaactgagtatacaaatgatct 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 44  atcacagtccctagcaactgagtatacaaatgatct 9
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>gb|BT016848.1| Zea mays clone Contig681 mRNA sequence
          Length = 855

 Score =  440 bits (222), Expect = e-120
 Identities = 299/326 (91%)
 Strand = Plus / Plus

                                                                       
Query: 134 tttcagncctctttgaacagctcacggccaattatcattcttctgatctcactagtacca 193
           |||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||||
Sbjct: 163 tttcagtcctctttgaagagctcacggccaattatcattcttcttacctcactagtacca 222

                                                                       
Query: 194 gccccaatctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttatg 253
           || |||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 223 gcaccaatctcaaacaattttgcatctctcaggagacgaccagttgggtactcatttatg 282

                                                                       
Query: 254 tatccattgccaccaagacactggattgcctcaagtgcaacttgtgttgccctttcagca 313
           || ||||| |||||||||||||||||||||| |||||||||||| |||||  ||||||||
Sbjct: 283 tacccatttccaccaagacactggattgcctgaagtgcaacttgggttgcattttcagca 342

                                                                       
Query: 314 gcaaagaggattactcctgcacaatccttgcgatcaactttgccattatcacagtcccta 373
           |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 343 gcaaagagaattactcctgcacaatccttgcgatcaactttgccattatcgcagtcccta 402

                                                                       
Query: 374 gcaactgagtatacaaatgatcttgatgattgcaaggaggngtacatgtntgccatttnc 433
           ||||| |||||||||||||||||||| || ||||| |||| |||||| |  ||||||| |
Sbjct: 403 gcaaccgagtatacaaatgatcttgacgactgcaacgaggtgtacatatcggccattttc 462

                                     
Query: 434 ccctgtaagaactgaaattcaccaat 459
           ||||||| ||||||||||||||||||
Sbjct: 463 ccctgtatgaactgaaattcaccaat 488
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>gb|AY107381.1| Zea mays PCO061330 mRNA sequence
          Length = 1531

 Score =  414 bits (209), Expect = e-112
 Identities = 292/321 (90%)
 Strand = Plus / Minus

                                                                        
Query: 134  tttcagncctctttgaacagctcacggccaattatcattcttctgatctcactagtacca 193
            |||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||| 
Sbjct: 1320 tttcagtcctctttgaagagctcacggccaattatcattcttcttacctcactagtaccg 1261

                                                                        
Query: 194  gccccaatctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttatg 253
            || |||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1260 gcaccaatctcaaacaattttgcatctctcaggagacgaccagttgggtactcatttatg 1201

                                                                        
Query: 254  tatccattgccaccaagacactggattgcctcaagtgcaacttgtgttgccctttcagca 313
            || ||||| |||||||||||||||||||||| |||||||||||| |||||  ||||||||
Sbjct: 1200 tacccatttccaccaagacactggattgcctgaagtgcaacttgggttgcattttcagca 1141

                                                                        
Query: 314  gcaaagaggattactcctgcacaatccttgcgatcaactttgccattatcacagtcccta 373
            |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1140 gcaaagagaattactcctgcacaatccttgcgatcaactttgccattatcgcagtcccta 1081

                                                                        
Query: 374  gcaactgagtatacaaatgatcttgatgattgcaaggaggngtacatgtntgccatttnc 433
            ||||||||||| |||||||||||||| || ||||| || | |||||| |  ||||||| |
Sbjct: 1080 gcaactgagtacacaaatgatcttgacgactgcaacgaagtgtacatatcagccattttc 1021

                                 
Query: 434  ccctgtaagaactgaaattca 454
            ||||||| |||||||||||||
Sbjct: 1020 ccctgtatgaactgaaattca 1000
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>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full
            insert sequence
          Length = 1663

 Score =  396 bits (200), Expect = e-107
 Identities = 307/344 (89%)
 Strand = Plus / Minus

                                                                        
Query: 116  tggcttccagaagaataatttcagncctctttgaacagctcacggccaattatcattctt 175
            ||||||||| || |||| |||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1513 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 1454

                                                                        
Query: 176  ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 235
            || |||||||||||||| || |||||||| |||||||||||||||||||| |  || |||
Sbjct: 1453 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 1394

                                                                        
Query: 236  gttgggtactcatttatgtatccattgccaccaagacactggattgcctcaagtgcaact 295
            ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| 
Sbjct: 1393 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcctgaagtgcaacc 1334

                                                                        
Query: 296  tgtgttgccctttcagcagcaaagaggattactcctgcacaatccttgcgatcaactttg 355
            || ||||||||||||||||||||||| || || || |||||||||||||| |||||||| 
Sbjct: 1333 tgggttgccctttcagcagcaaagagaatcacaccagcacaatccttgcggtcaacttta 1274

                                                                        
Query: 356  ccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgcaaggaggng 415
            ||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||| |
Sbjct: 1273 ccattgtcacagtccctagcaaccgagtaaacaaatgaccttgatgactgcaaggaggtg 1214

                                                        
Query: 416  tacatgtntgccatttncccctgtaagaactgaaattcaccaat 459
            ||||| | ||||| || |||||||| ||||||||||||||||||
Sbjct: 1213 tacatatctgccaatttcccctgtatgaactgaaattcaccaat 1170
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>dbj|AK066314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064C04, full
            insert sequence
          Length = 1500

 Score =  396 bits (200), Expect = e-107
 Identities = 307/344 (89%)
 Strand = Plus / Minus

                                                                        
Query: 116  tggcttccagaagaataatttcagncctctttgaacagctcacggccaattatcattctt 175
            ||||||||| || |||| |||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1350 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 1291

                                                                        
Query: 176  ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 235
            || |||||||||||||| || |||||||| |||||||||||||||||||| |  || |||
Sbjct: 1290 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 1231

                                                                        
Query: 236  gttgggtactcatttatgtatccattgccaccaagacactggattgcctcaagtgcaact 295
            ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| 
Sbjct: 1230 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcctgaagtgcaacc 1171

                                                                        
Query: 296  tgtgttgccctttcagcagcaaagaggattactcctgcacaatccttgcgatcaactttg 355
            || ||||||||||||||||||||||| || || || |||||||||||||| |||||||| 
Sbjct: 1170 tgggttgccctttcagcagcaaagagaatcacaccagcacaatccttgcggtcaacttta 1111

                                                                        
Query: 356  ccattatcacagtccctagcaactgagtatacaaatgatcttgatgattgcaaggaggng 415
            ||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||| |
Sbjct: 1110 ccattgtcacagtccctagcaaccgagtaaacaaatgaccttgatgactgcaaggaggtg 1051

                                                        
Query: 416  tacatgtntgccatttncccctgtaagaactgaaattcaccaat 459
            ||||| | ||||| || |||||||| ||||||||||||||||||
Sbjct: 1050 tacatatctgccaatttcccctgtatgaactgaaattcaccaat 1007
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>ref|XM_475553.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1230

 Score =  385 bits (194), Expect = e-104
 Identities = 287/319 (89%)
 Strand = Plus / Minus

                                                                        
Query: 141  cctctttgaacagctcacggccaattatcattcttctgatctcactagtaccagccccaa 200
            |||||||||| ||||| |||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 1225 cctctttgaagagctcgcggccaattatcattcttcttatctcactagtaccggctccaa 1166

                                                                        
Query: 201  tctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttatgtatccat 260
            |||| |||||||||||||||||||| |  || |||||||||||||||||||||||||| |
Sbjct: 1165 tctcaaacagttttgcatctctcagcaatcggccagttgggtactcatttatgtatccgt 1106

                                                                        
Query: 261  tgccaccaagacactggattgcctcaagtgcaacttgtgttgccctttcagcagcaaaga 320
            |||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||
Sbjct: 1105 tgccaccaagacactgtattgcctgaagtgcaacctgggttgccctttcagcagcaaaga 1046

                                                                        
Query: 321  ggattactcctgcacaatccttgcgatcaactttgccattatcacagtccctagcaactg 380
            | || || || |||||||||||||| |||||||| ||||| ||||||||||||||||| |
Sbjct: 1045 gaatcacaccagcacaatccttgcggtcaactttaccattgtcacagtccctagcaaccg 986

                                                                        
Query: 381  agtatacaaatgatcttgatgattgcaaggaggngtacatgtntgccatttncccctgta 440
            |||| |||||||| |||||||| |||||||||| |||||| | ||||| || ||||||||
Sbjct: 985  agtaaacaaatgaccttgatgactgcaaggaggtgtacatatctgccaatttcccctgta 926

                               
Query: 441  agaactgaaattcaccaat 459
             ||||||||||||||||||
Sbjct: 925  tgaactgaaattcaccaat 907
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>gb|BT017728.1| Zea mays clone EL01N0447H09.c mRNA sequence
          Length = 942

 Score =  331 bits (167), Expect = 1e-87
 Identities = 287/327 (87%), Gaps = 1/327 (0%)
 Strand = Plus / Minus

                                                                       
Query: 134 tttcagncctctttgaacagctcacggccaattatcattct-tctgatctcactagtacc 192
           |||||| ||| |||||| ||||||||||||||||||||| | | | ||||| || | |||
Sbjct: 741 tttcagtcctttttgaagagctcacggccaattatcattgtgtgttatctcgcttggacc 682

                                                                       
Query: 193 agccccaatctcgaacagttttgcatctctcagtagacgcccagttgggtactcatttat 252
           |||||||||||| |||| |||||||| | | || ||||| |||| |||||||||||||||
Sbjct: 681 agccccaatctcaaacaattttgcatttttgaggagacgaccagctgggtactcatttat 622

                                                                       
Query: 253 gtatccattgccaccaagacactggattgcctcaagtgcaacttgtgttgccctttcagc 312
           ||| ||||| ||||||||||| ||||| |||| |||||| ||||| |||||  |||||||
Sbjct: 621 gtacccatttccaccaagacagtggatcgcctgaagtgccacttgggttgcattttcagc 562

                                                                       
Query: 313 agcaaagaggattactcctgcacaatccttgcgatcaactttgccattatcacagtccct 372
           ||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 agcaaagagaattacccctgcacaatccttgcgatcaactttgccattatcgcagtccct 502

                                                                       
Query: 373 agcaactgagtatacaaatgatcttgatgattgcaaggaggngtacatgtntgccatttn 432
           |||| | ||||||||||||||||||||||| ||||| |||| |||||| |  ||||||| 
Sbjct: 501 agcagccgagtatacaaatgatcttgatgactgcaatgaggtgtacatatcagccatttt 442

                                      
Query: 433 cccctgtaagaactgaaattcaccaat 459
           |||||||| ||||||||||||||||||
Sbjct: 441 cccctgtatgaactgaaattcaccaat 415
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score =  202 bits (102), Expect = 7e-49
 Identities = 152/169 (89%)
 Strand = Plus / Plus

                                                                         
Query: 116   tggcttccagaagaataatttcagncctctttgaacagctcacggccaattatcattctt 175
             ||||||||| || |||| |||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 71462 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 71521

                                                                         
Query: 176   ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 235
             || |||||||||||||| || |||||||| |||||||||||||||||||| |  || |||
Sbjct: 71522 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 71581

                                                              
Query: 236   gttgggtactcatttatgtatccattgccaccaagacactggattgcct 284
             ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 71582 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcct 71630



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                    
Query: 339   ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 393
             ||||||| |||||||| ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 72435 ccttgcggtcaactttaccattgtcacagtccctagcaaccgagtaaacaaatga 72489



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                     
Query: 286   aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
             ||||||||| || ||||||||||||||||||||||| || || || ||||||||||
Sbjct: 71969 aagtgcaacctgggttgccctttcagcagcaaagagaatcacaccagcacaatcct 72024



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 435   cctgtaagaactgaaattcaccaat 459
             |||||| ||||||||||||||||||
Sbjct: 72712 cctgtatgaactgaaattcaccaat 72736
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  202 bits (102), Expect = 7e-49
 Identities = 152/169 (89%)
 Strand = Plus / Plus

                                                                           
Query: 116     tggcttccagaagaataatttcagncctctttgaacagctcacggccaattatcattctt 175
               ||||||||| || |||| |||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 1409800 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 1409859

                                                                           
Query: 176     ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 235
               || |||||||||||||| || |||||||| |||||||||||||||||||| |  || |||
Sbjct: 1409860 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 1409919

                                                                
Query: 236     gttgggtactcatttatgtatccattgccaccaagacactggattgcct 284
               ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1409920 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcct 1409968



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                      
Query: 339     ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 393
               ||||||| |||||||| ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 1410773 ccttgcggtcaactttaccattgtcacagtccctagcaaccgagtaaacaaatga 1410827



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                       
Query: 286     aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
               ||||||||| || ||||||||||||||||||||||| || || || ||||||||||
Sbjct: 1410307 aagtgcaacctgggttgccctttcagcagcaaagagaatcacaccagcacaatcct 1410362



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 435     cctgtaagaactgaaattcaccaat 459
               |||||| ||||||||||||||||||
Sbjct: 1411050 cctgtatgaactgaaattcaccaat 1411074
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>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12,
            complete sequence
          Length = 144455

 Score =  202 bits (102), Expect = 7e-49
 Identities = 152/169 (89%)
 Strand = Plus / Plus

                                                                        
Query: 116  tggcttccagaagaataatttcagncctctttgaacagctcacggccaattatcattctt 175
            ||||||||| || |||| |||||  |||||||||| ||||| ||||||||||||||||||
Sbjct: 3880 tggcttccaaaataatagtttcactcctctttgaagagctcgcggccaattatcattctt 3939

                                                                        
Query: 176  ctgatctcactagtaccagccccaatctcgaacagttttgcatctctcagtagacgccca 235
            || |||||||||||||| || |||||||| |||||||||||||||||||| |  || |||
Sbjct: 3940 cttatctcactagtaccggctccaatctcaaacagttttgcatctctcagcaatcggcca 3999

                                                             
Query: 236  gttgggtactcatttatgtatccattgccaccaagacactggattgcct 284
            ||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 4000 gttgggtactcatttatgtatccgttgccaccaagacactgtattgcct 4048



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                   
Query: 339  ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatga 393
            ||||||| |||||||| ||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 4853 ccttgcggtcaactttaccattgtcacagtccctagcaaccgagtaaacaaatga 4907



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 286  aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
            ||||||||| || ||||||||||||||||||||||| || || || ||||||||||
Sbjct: 4387 aagtgcaacctgggttgccctttcagcagcaaagagaatcacaccagcacaatcct 4442



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 435  cctgtaagaactgaaattcaccaat 459
            |||||| ||||||||||||||||||
Sbjct: 5130 cctgtatgaactgaaattcaccaat 5154
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>emb|AJ278988.1|STU278988 Solanum tuberosum partial mRNA for isovaleryl-CoA dehydrogenase (ivd2
            gene)
          Length = 1415

 Score =  121 bits (61), Expect = 2e-24
 Identities = 157/189 (83%)
 Strand = Plus / Minus

                                                                        
Query: 155  tcacggccaattatcattcttctgatctcactagtaccagccccaatctcgaacagtttt 214
            |||||||| ||||||||||||||||||||||| || || || ||||||||  | ||||| 
Sbjct: 1187 tcacggcctattatcattcttctgatctcacttgtgcctgcaccaatctcatatagtttg 1128

                                                                        
Query: 215  gcatctctcagtagacgcccagttgggtactcatttatgtatccattgccaccaagacac 274
            |||||||  || | ||| ||||| ||||||||||| | ||| |||||||| || || |||
Sbjct: 1127 gcatctcggagaaaacgtccagtcgggtactcattcacgtagccattgcctccgaggcac 1068

                                                                        
Query: 275  tggattgcctcaagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgca 334
            || || |||| ||| |||||||| ||||| |||||||||||| |||| || || || |||
Sbjct: 1067 tgaatagcctgaagagcaacttgggttgctctttcagcagcagagagtataacaccagca 1008

                     
Query: 335  caatccttg 343
            |||||||||
Sbjct: 1007 caatccttg 999
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>gb|DQ427127.1| Sorghum propinquum locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427126.1| Sorghum bicolor voucher PI585454 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427125.1| Sorghum bicolor voucher PI267539 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427124.1| Sorghum bicolor voucher PI267408 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427123.1| Sorghum bicolor voucher PI221607 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427122.1| Sorghum bicolor voucher PI152702 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427121.1| Sorghum bicolor voucher NSL92371 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427120.1| Sorghum bicolor voucher NSL87666 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427119.1| Sorghum bicolor voucher NSL77217 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427118.1| Sorghum bicolor voucher NSL77034 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427117.1| Sorghum bicolor voucher NSL56174 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427116.1| Sorghum bicolor voucher NSL56003 locus CDO0580 genomic sequence
          Length = 676

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427115.1| Sorghum bicolor voucher NSL55243 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
to top
>gb|DQ427114.1| Sorghum bicolor voucher NSL51365 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
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>gb|DQ427113.1| Sorghum bicolor voucher NSL51030 locus CDO0580 genomic sequence
          Length = 677

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 533 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 478



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
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>gb|DQ427112.1| Sorghum bicolor voucher NSL50875 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
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>gb|DQ427111.1| Sorghum bicolor voucher BTx623 locus CDO0580 genomic sequence
          Length = 679

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 339 ccttgcgatcaactttgccattatcacagtccctagcaactgagtatacaaatgatct 396
           ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 321 ccttgcggtcaactttgccattatcgcagtccctagcaaccgagtatacaaatgatct 264



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 286 aagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcct 341
           |||||||||||| |||||  |||||||||||||||| |||||||||||||||||||
Sbjct: 535 aagtgcaacttgggttgcattttcagcagcaaagagaattactcctgcacaatcct 480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 435 cctgtaagaactgaaattcaccaat 459
           |||||| ||||||||||||||||||
Sbjct: 46  cctgtatgaactgaaattcaccaat 22
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>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence
          Length = 161536

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 145/181 (80%)
 Strand = Plus / Plus

                                                                         
Query: 161   ccaattatcattcttctgatctcactagtaccagccccaatctcgaacagttttgcatct 220
             ||||| |||||||||||||||||||| || || ||||| |||||| | ||||| ||||||
Sbjct: 11870 ccaataatcattcttctgatctcacttgttccggccccgatctcgtagagtttcgcatct 11929

                                                                         
Query: 221   ctcagtagacgcccagttgggtactcatttatgtatccattgccaccaagacactggatt 280
             || || ||||| || ||||| ||||| || |  || || || ||||| | ||| || || 
Sbjct: 11930 ctaaggagacgaccggttggatactcgttgacatagccgtttccacctaaacattgtatc 11989

                                                                         
Query: 281   gcctcaagtgcaacttgtgttgccctttcagcagcaaagaggattactcctgcacaatcc 340
             ||||  |  |||||||||||||| |||||||| ||| | || || ||||| |||||||||
Sbjct: 11990 gcctgcaaagcaacttgtgttgctctttcagctgcacaaagtataactccagcacaatcc 12049

              
Query: 341   t 341
             |
Sbjct: 12050 t 12050
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>emb|AJ010945.1|PSA010945 Pisum sativum mRNA for Isovaleryl-CoA dehydrogenase/auxin binding
            protein (abp44/ivdh gene)
          Length = 1559

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 177/226 (78%)
 Strand = Plus / Minus

                                                                        
Query: 146  ttgaacagctcacggccaattatcattcttctgatctcactagtaccagccccaatctcg 205
            ||||| ||||| || || || ||||||||||||||||||||||| || || || ||||||
Sbjct: 1321 ttgaagagctcgcgtcctataatcattcttctgatctcactagttccggctccgatctcg 1262

                                                                        
Query: 206  aacagttttgcatctctcagtagacgcccagttgggtactcatttatgtatccattgcca 265
             | ||||| |||||||| || ||||  || ||||| || ||||| |  || || || || 
Sbjct: 1261 taaagtttagcatctctaaggagacaaccggttggatattcattcacataaccgttcccg 1202

                                                                        
Query: 266  ccaagacactggattgcctcaagtgcaacttgtgttgccctttcagcagcaaagaggatt 325
            || | ||| || || ||||  |  ||||| || ||||| |||||||| ||| | || || 
Sbjct: 1201 cctaaacattgtatcgcctgcaaagcaacctgcgttgctctttcagctgcacaaagtata 1142

                                                          
Query: 326  actcctgcacaatccttgcgatcaactttgccattatcacagtccc 371
            ||||| |||||||||||  | |||||||| || |||||||||||||
Sbjct: 1141 actccagcacaatccttcgggtcaacttttccgttatcacagtccc 1096
to top
>emb|AJ010946.1|PSA010946 Pisum sativum abp44/ivdh gene for Isovaleryl-CoA dehydrogenase/auxin
            binding protein
          Length = 3572

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 146  ttgaacagctcacggccaattatcattcttctgatctcactagtaccagccccaatctcg 205
            ||||| ||||| || || || ||||||||||||||||||||||| || || || ||||||
Sbjct: 3334 ttgaagagctcgcgtcctataatcattcttctgatctcactagttccggctccgatctcg 3275

                             
Query: 206  aacagttttgcatctct 222
             | ||||| ||||||||
Sbjct: 3274 taaagtttagcatctct 3258
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>ref|NM_114399.3| Arabidopsis thaliana IVD (ISOVALERYL-COA-DEHYDROGENASE) AT3G45300
            (IVD) mRNA, complete cds
          Length = 2014

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 347  tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattg 405
            |||||||| ||||| ||||||||||| ||||| ||||| ||  |||| ||||| |||||
Sbjct: 1219 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattg 1161
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>emb|Y12695.1|ATISOVAL A.thaliana mRNA for isovaleryl-CoA dehydrogenase
          Length = 1321

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 347  tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattg 405
            |||||||| ||||| ||||||||||| ||||| ||||| ||  |||| ||||| |||||
Sbjct: 1069 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattg 1011
to top
>gb|AY128799.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor IVD
            (At3g45300) mRNA, complete cds
          Length = 1416

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 347  tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattg 405
            |||||||| ||||| ||||||||||| ||||| ||||| ||  |||| ||||| |||||
Sbjct: 1019 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattg 961
to top
>gb|AY062567.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD)
            (F18N11.6) mRNA, complete cds
          Length = 1477

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 347  tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattg 405
            |||||||| ||||| ||||||||||| ||||| ||||| ||  |||| ||||| |||||
Sbjct: 1049 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattg 991
to top
>gb|AF160729.1|AF160729 Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD)
            mRNA, complete cds; nuclear gene for mitochondrial
            product
          Length = 1547

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 347  tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattg 405
            |||||||| ||||| ||||||||||| ||||| ||||| ||  |||| ||||| |||||
Sbjct: 1231 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattg 1173
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>gb|AY087286.1| Arabidopsis thaliana clone 33674 mRNA, complete sequence
          Length = 1514

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 347  tcaactttgccattatcacagtccctagcaactgagtatacaaatgatcttgatgattg 405
            |||||||| ||||| ||||||||||| ||||| ||||| ||  |||| ||||| |||||
Sbjct: 1145 tcaactttcccattgtcacagtccctcgcaacagagtaaacgtatgaccttgaagattg 1087
to top
>emb|BX936340.7| Zebrafish DNA sequence from clone CH211-286P18 in linkage group 12,
             complete sequence
          Length = 85745

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 305   ctttcagcagcaaagaggatta 326
             ||||||||||||||||||||||
Sbjct: 12053 ctttcagcagcaaagaggatta 12032
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>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11
          Length = 91274

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 347   tcaactttgccattatcacagtccctagcaactgagta 384
             |||||||| ||||| ||||||||||| ||||| |||||
Sbjct: 52836 tcaactttcccattgtcacagtccctcgcaacagagta 52873
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>emb|BX957362.26| Zebrafish DNA sequence from clone CH211-122F10 in linkage group 7,
             complete sequence
          Length = 191638

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   tttcagcagcaaagaggatta 326
             |||||||||||||||||||||
Sbjct: 61628 tttcagcagcaaagaggatta 61648
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>emb|CR659357.2|CNS0F7QB Tetraodon nigroviridis full-length cDNA
          Length = 1085

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 76  tcctgctcacctcctccagtt 96
           |||||||||||||||||||||
Sbjct: 729 tcctgctcacctcctccagtt 709
to top
>gb|AY917022.1| Taiwania cryptomerioides voucher NSYSU 62-3B clone 2 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
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>gb|AY917021.1| Taiwania cryptomerioides voucher NSYSU 62-3A clone 1 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY917019.1| Taiwania cryptomerioides voucher NSYSU 62-2c clone 3 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 840 gcctcaagtgcaacttgtgtt 820
to top
>gb|AY916981.1| Taiwania cryptomerioides voucher NSYSU 45-2A clone 1 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1087

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 838 gcctcaagtgcaacttgtgtt 818
to top
>gb|AY916952.1| Taiwania cryptomerioides voucher NSYSU 33-2B2 clone 2 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY916950.1| Taiwania cryptomerioides voucher NSYSU 33-2a2 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene,
           complete sequence; and internal transcribed spacer 2,
           partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY916949.1| Taiwania cryptomerioides voucher NSYSU 33-2C2 clone 3 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY916903.1| Taiwania cryptomerioides voucher NSYSU 24-4C clone 3 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY916896.1| Taiwania cryptomerioides voucher NSYSU 24-2B clone 2 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY916890.1| Taiwania cryptomerioides voucher NSYSU 23-3C clone 3 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1087

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 838 gcctcaagtgcaacttgtgtt 818
to top
>gb|AY916875.1| Taiwania cryptomerioides voucher NSYSU 7-2C clone 3 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 839 gcctcaagtgcaacttgtgtt 819
to top
>gb|AY916854.1| Taiwania cryptomerioides voucher NSYSU 19-3A clone 1 internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 gcctcaagtgcaacttgtgtt 301
           |||||||||||||||||||||
Sbjct: 840 gcctcaagtgcaacttgtgtt 820
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>ref|XM_510308.1| PREDICTED: Pan troglodytes LOC453333 (LOC453333), mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1736 tcattgatgtagccattgccaccaaaacactg 1705
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>gb|AC154827.3| Mus musculus BAC clone RP24-546P18 from chromosome 14, complete
             sequence
          Length = 168432

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   agatggcttccagaagaataattt 136
             |||||||||||||| |||||||||
Sbjct: 73427 agatggcttccagaggaataattt 73404
to top
>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238466

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cattatcacagtccctagca 376
              ||||||||||||||||||||
Sbjct: 158966 cattatcacagtccctagca 158947
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>gb|BC017202.2| Homo sapiens isovaleryl Coenzyme A dehydrogenase, mRNA (cDNA clone
            MGC:3496 IMAGE:3627787), complete cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1171 tcattgatgtagccattgccaccaaaacactg 1140
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>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete sequence
          Length = 166751

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cattatcacagtccctagca 376
              ||||||||||||||||||||
Sbjct: 154530 cattatcacagtccctagca 154511
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>gb|BT013129.1| Lycopersicon esculentum clone 114421R, mRNA sequence
          Length = 1106

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 tttcagcagcaaagaggatt 325
           ||||||||||||||||||||
Sbjct: 42  tttcagcagcaaagaggatt 23
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>ref|NM_002225.2| Homo sapiens isovaleryl Coenzyme A dehydrogenase (IVD), nuclear gene
            encoding mitochondrial protein, mRNA
          Length = 2216

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1503 tcattgatgtagccattgccaccaaaacactg 1472
to top
>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 224326

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   cattatcacagtccctagca 376
             ||||||||||||||||||||
Sbjct: 71475 cattatcacagtccctagca 71456
to top
>emb|AJ012255.1|LMO012255 Listeria monocytogenes dlt operon
          Length = 5637

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  ttgcgatcaactttgccatt 360
            ||||||||||||||||||||
Sbjct: 2006 ttgcgatcaactttgccatt 1987
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>gb|BT007919.1| Synthetic construct Homo sapiens isovaleryl Coenzyme A dehydrogenase
            mRNA, partial cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
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>gb|BT007145.1| Homo sapiens isovaleryl Coenzyme A dehydrogenase mRNA, complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
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>emb|CR858716.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1339 (from clone DKFZp469A1339)
          Length = 1966

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1169 tcattgatgtagccattgccaccaaaacactg 1138
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>gb|AC095351.5| Homo sapiens X BAC RP11-359C4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 194296

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  ttccagaagaataatttcag 139
            ||||||||||||||||||||
Sbjct: 9613 ttccagaagaataatttcag 9594
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>dbj|AK122922.1| Homo sapiens cDNA FLJ16602 fis, clone TESTI4007816, highly  similar
            to Isovaleryl-CoA dehydrogenase, mitochondrial precursor
            (EC 1.3.99.10)
          Length = 4256

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1103 tcattgatgtagccattgccaccaaaacactg 1072
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>gb|AF078902.1| Sorghum bicolor centromere element pHind12, complete sequence
          Length = 2008

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  actcatttatgtatccattg 262
            ||||||||||||||||||||
Sbjct: 1529 actcatttatgtatccattg 1510
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>gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid clone D75C1 map 21q22.2,
            complete sequence
          Length = 40874

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 356  ccattatcacagtccctagcaact 379
            ||||| ||||||||||||||||||
Sbjct: 9961 ccattctcacagtccctagcaact 9984
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>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence
          Length = 182611

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   aattatcattcttctgatct 182
             ||||||||||||||||||||
Sbjct: 58706 aattatcattcttctgatct 58725
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cattatcacagtccctagca 376
              ||||||||||||||||||||
Sbjct: 982868 cattatcacagtccctagca 982849
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>gb|AY892811.1| Synthetic construct Homo sapiens clone FLH022793.01L isovaleryl
            coenzyme A dehydrogenase (IVD) mRNA, partial cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
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>gb|AY890339.1| Synthetic construct Homo sapiens clone FLH022797.01X isovaleryl
            Coenzyme A dehydrogenase (IVD) mRNA, complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
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>gb|AY890338.1| Synthetic construct Homo sapiens clone FLH022796.01X isovaleryl
            Coenzyme A dehydrogenase (IVD) mRNA, complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1160 tcattgatgtagccattgccaccaaaacactg 1129
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>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 356    ccattatcacagtccctagcaact 379
              ||||| ||||||||||||||||||
Sbjct: 235324 ccattctcacagtccctagcaact 235301
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>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 356    ccattatcacagtccctagcaact 379
              ||||| ||||||||||||||||||
Sbjct: 302753 ccattctcacagtccctagcaact 302776
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>emb|CR352252.12| Zebrafish DNA sequence from clone CH211-181P13 in linkage group 22,
             complete sequence
          Length = 115241

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tcattcttctgatctcacta 187
             ||||||||||||||||||||
Sbjct: 36346 tcattcttctgatctcacta 36365
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>gb|AF070531.1|AF070531 Homo sapiens clone 24764 mRNA sequence
          Length = 1544

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 245 tcatttatgtatccattgccaccaagacactg 276
           ||||| ||||| ||||||||||||| ||||||
Sbjct: 537 tcattgatgtagccattgccaccaaaacactg 506
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>emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chromosome 14, complete
              sequence
          Length = 205581

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 113    agatggcttccagaagaataattt 136
              |||||||||||||| |||||||||
Sbjct: 111172 agatggcttccagaggaataattt 111195
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>gb|M34192.1|HUMICOA Human isovaleryl-coA dehydrogenase (IVD) mRNA, complete cds
          Length = 1881

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 245  tcatttatgtatccattgccaccaagacactg 276
            ||||| ||||| ||||||||||||| ||||||
Sbjct: 1175 tcattgatgtagccattgccaccaaaacactg 1144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,386,815
Number of Sequences: 3902068
Number of extensions: 3386815
Number of successful extensions: 59884
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59710
Number of HSP's gapped (non-prelim): 169
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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