>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6|
          Length = 251

 Score =  206 bits (523), Expect = 7e-53
 Identities = 106/137 (77%), Positives = 116/137 (84%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           VS DLSV+NLVIVKKG+NDLPGLTD EKPRMRGPKRASKI+KLFNL K+DDVR+YVNTYR
Sbjct: 104 VSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYR 163

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R+FTNKKGKT SKAPKIQRLVTPLT+Q                KSEAAEYQKLLA RLKE
Sbjct: 164 RTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKE 223

Query: 315 QRDRRSESMAKRRSKLS 265
           QRDRRSES+AK+RS+LS
Sbjct: 224 QRDRRSESLAKKRSRLS 240

>RS6B_ARATH (P51430) 40S ribosomal protein S6-2|
          Length = 249

 Score =  204 bits (519), Expect = 2e-52
 Identities = 104/137 (75%), Positives = 116/137 (84%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           VS DLSV+NLVIVKKG +DLPGLTDTEKPRMRGPKRASKI+KLFNLGK+DDVR+YVNTYR
Sbjct: 104 VSPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYR 163

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R+FTNKKGK VSKAPKIQRLVTPLT+Q                 S+AA+YQKLLA RLKE
Sbjct: 164 RTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKE 223

Query: 315 QRDRRSESMAKRRSKLS 265
           QRDRRSES+AK+RS+LS
Sbjct: 224 QRDRRSESLAKKRSRLS 240

>RS6A_ARATH (O48549) 40S ribosomal protein S6-1|
          Length = 250

 Score =  203 bits (516), Expect = 4e-52
 Identities = 104/137 (75%), Positives = 114/137 (83%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           VS DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGPKRASKI+KLFNL K+DDVR YVNTYR
Sbjct: 104 VSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYR 163

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R FTNKKGK VSKAPKIQRLVTPLT+Q                 S+AA+YQKLLA RLKE
Sbjct: 164 RKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKE 223

Query: 315 QRDRRSESMAKRRSKLS 265
           QRDRRSES+AK+RS+LS
Sbjct: 224 QRDRRSESLAKKRSRLS 240

>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)|
          Length = 199

 Score =  155 bits (391), Expect = 1e-37
 Identities = 87/137 (63%), Positives = 101/137 (73%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           VS DLSV+NLVIVKKG+NDLPGLTDTEKPRMRGP+   + + L+   K+DDVR+YVNT  
Sbjct: 59  VSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALYF--KEDDVRKYVNTTA 116

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
              T  KG   SKAPKIQRLVTPLT+Q                KSEAAEYQKLLA RLKE
Sbjct: 117 EFTTKWKG---SKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKE 173

Query: 315 QRDRRSESMAKRRSKLS 265
           QR++RSES+AK+RS+LS
Sbjct: 174 QREKRSESLAKKRSRLS 190

>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score =  137 bits (344), Expect = 4e-32
 Identities = 74/133 (55%), Positives = 92/133 (69%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVI++KG+ D+PGLTD+  PR  GPKRAS+I+KLFNL K+DDVRQYV   R
Sbjct: 102 VDANLSVLNLVIIRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R  T +  K  +KAPKIQRLVTP  +Q                K EAAEY KLLA+RLKE
Sbjct: 160 RPLTKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTQKNKDEAAEYAKLLAKRLKE 219

Query: 315 QRDRRSESMAKRR 277
            +++R E +AKRR
Sbjct: 220 AKEKRQEKIAKRR 232

>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score =  136 bits (343), Expect = 5e-32
 Identities = 77/134 (57%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQYV    
Sbjct: 102 VDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---V 158

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R   NK+GK   +KAPKIQRLVTP  +Q                K EAAEY KLLA+R+K
Sbjct: 159 RKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMK 218

Query: 318 EQRDRRSESMAKRR 277
           E +++R E +AKRR
Sbjct: 219 EAKEKRQEQIAKRR 232

>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  136 bits (343), Expect = 5e-32
 Identities = 77/134 (57%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQYV    
Sbjct: 102 VDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---V 158

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R   NK+GK   +KAPKIQRLVTP  +Q                K EAAEY KLLA+R+K
Sbjct: 159 RKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMK 218

Query: 318 EQRDRRSESMAKRR 277
           E +++R E +AKRR
Sbjct: 219 EAKEKRQEQIAKRR 232

>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  136 bits (343), Expect = 5e-32
 Identities = 77/134 (57%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQYV    
Sbjct: 102 VDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---V 158

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R   NK+GK   +KAPKIQRLVTP  +Q                K EAAEY KLLA+R+K
Sbjct: 159 RKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMK 218

Query: 318 EQRDRRSESMAKRR 277
           E +++R E +AKRR
Sbjct: 219 EAKEKRQEQIAKRR 232

>RS6_CHICK (P47838) 40S ribosomal protein S6|
          Length = 249

 Score =  135 bits (340), Expect = 1e-31
 Identities = 76/134 (56%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVIVKKG+ D+PGLTDT  PR  GPKRAS+I+KLFNL K+DDVRQYV    
Sbjct: 102 VDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---V 158

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R   NK+GK   +KAPKIQRLVTP  +Q                K EAA+Y KLLA+R+K
Sbjct: 159 RKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMK 218

Query: 318 EQRDRRSESMAKRR 277
           E +++R E +AKRR
Sbjct: 219 EAKEKRQEQIAKRR 232

>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6|
          Length = 249

 Score =  135 bits (339), Expect = 1e-31
 Identities = 72/130 (55%), Positives = 91/130 (70%)
 Frame = -1

Query: 666 DLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYRRSF 487
           +LSV+NLVI+KKG+ D+PGLTD+  PR  GPKRASKI+KLFNL K+DDVRQYV   RR  
Sbjct: 105 NLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYV--VRRPL 162

Query: 486 TNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKEQRD 307
           T +  K  +KAP+IQRLVTP  +Q                K EA+EY KLLA+R+KE ++
Sbjct: 163 TKEGKKPRTKAPRIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRMKEAKE 222

Query: 306 RRSESMAKRR 277
           +R E +AKRR
Sbjct: 223 KRQEQIAKRR 232

>RS6_XENLA (P39017) 40S ribosomal protein S6|
          Length = 249

 Score =  130 bits (327), Expect = 4e-30
 Identities = 71/133 (53%), Positives = 89/133 (66%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVIV+KG+ D+PGLTD   PR  GPKRAS+I+KLFNL K+DDVRQYV   R
Sbjct: 102 VDANLSVLNLVIVRKGEKDIPGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           +    +  K  +KAPKIQRLVTP  +Q                K EA+EY KLLA+R KE
Sbjct: 160 KPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKE 219

Query: 315 QRDRRSESMAKRR 277
            +++R E +AKRR
Sbjct: 220 AKEKRQEQIAKRR 232

>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6|
          Length = 247

 Score =  127 bits (318), Expect = 4e-29
 Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 2/137 (1%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV++LVI+KKG+ D+PGLTD   PR  GPKRASKI+KLFNL K+DDVRQYV   R
Sbjct: 102 VDSNLSVLSLVIIKKGEQDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VR 159

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R    + GK   SKAPKIQRLVTP+ +Q                + + AEY KLLAQR+K
Sbjct: 160 RPLPERDGKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMK 219

Query: 318 EQRDRRSE-SMAKRRSK 271
           E ++R+ E   +  RSK
Sbjct: 220 EAKERKMERKRSNSRSK 236

>RS6_BRAFL (O01727) 40S ribosomal protein S6|
          Length = 244

 Score =  121 bits (303), Expect = 2e-27
 Identities = 71/135 (52%), Positives = 86/135 (63%), Gaps = 1/135 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+NLVI+KKG+ D+PGLTDT  PR  GPKRA +I+KLFNL K+DDVRQYV   R
Sbjct: 102 VDSNLSVLNLVILKKGEQDIPGLTDTTIPRRLGPKRAGRIRKLFNLNKEDDVRQYV--VR 159

Query: 495 RSFTNKKGKTVS-KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R    K+GK    K PKIQRL+TP  +Q                + E A Y KLLA+R K
Sbjct: 160 RPLPQKEGKKQKFKTPKIQRLITPQRLQRKRHMRAVKRRRYAKQREEEATYAKLLAKRKK 219

Query: 318 EQRDRRSESMAKRRS 274
           E+R    E+ AKRRS
Sbjct: 220 EER----EAHAKRRS 230

>RS6_MANSE (Q94624) 40S ribosomal protein S6|
          Length = 253

 Score =  119 bits (298), Expect = 8e-27
 Identities = 70/138 (50%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+ LVIV+KG+ ++PGLTD   PR  GPKRASKI+KLFNL K+DDVR+YV   +
Sbjct: 102 VDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VK 159

Query: 495 RSFTNKKGKTVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQ 328
                K+GK  +    KAPKIQRLVTP+ +Q                KS  A+Y KLLAQ
Sbjct: 160 ALLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKSAEADYAKLLAQ 219

Query: 327 RLKEQRDRRSESMAKRRS 274
           R KE + RR E + +RRS
Sbjct: 220 RKKESKVRRQEEIKRRRS 237

>RS6_YARLI (Q6C169) 40S ribosomal protein S6|
          Length = 242

 Score =  119 bits (297), Expect = 1e-26
 Identities = 66/136 (48%), Positives = 85/136 (62%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           VS DLSV+++VIVK+G  D+ GLT    PR  GPKRA+ I+KLF L K+DDVRQYV   R
Sbjct: 102 VSSDLSVLSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R  T K GKT +KAPKIQRL+TP  +                 K  AAEY +LLA+R+ E
Sbjct: 160 REVTTKSGKTYTKAPKIQRLITPRRLAHKAQLREKKVKAIQASKDAAAEYAQLLAKRVAE 219

Query: 315 QRDRRSESMAKRRSKL 268
           ++  ++E   +R S L
Sbjct: 220 KKSEKAEEKKRRASSL 235

>RS6_SPOFR (Q95V32) 40S ribosomal protein S6|
          Length = 253

 Score =  118 bits (296), Expect = 1e-26
 Identities = 69/138 (50%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  +LSV+ LVIV+KG+ ++PGLTD   PR  GPKRASKI+KLFNL K+DDVR+YV   +
Sbjct: 102 VDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VK 159

Query: 495 RSFTNKKGKTVS----KAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQ 328
           R    K+GK  +    KAPKIQRLVTP+ +Q                K    +Y KLLAQ
Sbjct: 160 RLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKQSENDYAKLLAQ 219

Query: 327 RLKEQRDRRSESMAKRRS 274
           R KE + RR E + +RRS
Sbjct: 220 RKKESKVRRQEELKRRRS 237

>RS6_DROME (P29327) 40S ribosomal protein S6|
          Length = 248

 Score =  117 bits (293), Expect = 3e-26
 Identities = 64/137 (46%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  ++SV+ LV++KKG+ D+PGLTDT  PR  GPKRASKI+KL+NL K+DDVR++V   R
Sbjct: 102 VDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VR 159

Query: 495 RSFTNKKG-KTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R    K   K  SKAPKIQRL+TP+ +Q                K  +A+Y KLL QR K
Sbjct: 160 RPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKK 219

Query: 318 EQRDRRSESMAKRRSKL 268
           E + +R E+  +R + +
Sbjct: 220 ESKAKREEAKRRRSASI 236

>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A|
          Length = 239

 Score =  117 bits (292), Expect = 4e-26
 Identities = 65/138 (47%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V QDL+V+ L I+K+G+ D+PGLTD   P+  GPKRASKI++ FNL K+DDVRQ+V   R
Sbjct: 102 VGQDLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV--IR 159

Query: 495 RSFTNKK--GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRL 322
           R    KK   K  +KAPKIQRLVTP T+Q                + EAAE+ +L+A+R+
Sbjct: 160 REVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRV 219

Query: 321 KEQRDRRSESMAKRRSKL 268
            E + +R    A+R S L
Sbjct: 220 AEAKQKREVVKARRASSL 237

>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B|
          Length = 239

 Score =  115 bits (288), Expect = 1e-25
 Identities = 64/138 (46%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V QDL+V+ L IVK+G+ D+PGLTD   P+  GPKRASKI++ FNL K+DDVRQ+V   R
Sbjct: 102 VGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV--IR 159

Query: 495 RSFTNKK--GKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRL 322
           R    KK   K  +KAPKIQRLVTP T+Q                + EAAE+ +L+A+R+
Sbjct: 160 REVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRV 219

Query: 321 KEQRDRRSESMAKRRSKL 268
            E + ++    A+R S +
Sbjct: 220 AEAKQKKEVVKARRASSM 237

>RS6_AEDAE (Q9U761) 40S ribosomal protein S6|
          Length = 346

 Score =  113 bits (283), Expect = 5e-25
 Identities = 63/138 (45%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V Q+LS + L++VKKG+ D+PGLTDT  PR  GPKRAS I+KL+NL K+DDVRQ+V   +
Sbjct: 102 VDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VK 159

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R    K GK   +KAPKIQRL+TP+ +Q                K   AEY K+L  R +
Sbjct: 160 RPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRR 219

Query: 318 EQRDRRSESMAKRRSKLS 265
           ++R RR   ++  R   S
Sbjct: 220 QERIRRRSRLSSMRDSRS 237

>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6|
          Length = 236

 Score =  112 bits (281), Expect = 8e-25
 Identities = 65/136 (47%), Positives = 85/136 (62%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V+QDL+V+ L +VK+G +D+ GLTDT  P+  GPKRA+ I+K F L K+DDVRQ+V   R
Sbjct: 102 VAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV--VR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R    K  K  +KAPKIQRLVTP T+Q                +  AAEY +LLAQRL E
Sbjct: 160 REVV-KGDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHE 218

Query: 315 QRDRRSESMAKRRSKL 268
           ++  R+E   +R S L
Sbjct: 219 RKAERAEIKKRRASSL 234

>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)|
          Length = 236

 Score =  111 bits (278), Expect = 2e-24
 Identities = 65/136 (47%), Positives = 84/136 (61%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  DL+V+ LVIVKKG+ +L GLTDT  P+  GPKRA+ I+K F L K+DDVR +V   R
Sbjct: 102 VGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV--IR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R  T K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA+RL E
Sbjct: 160 REVT-KGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSE 218

Query: 315 QRDRRSESMAKRRSKL 268
           ++  ++E   +R S L
Sbjct: 219 RKAEKAEIRKRRASSL 234

>RS6_AEDAL (Q9U762) 40S ribosomal protein S6|
          Length = 349

 Score =  110 bits (275), Expect = 4e-24
 Identities = 63/138 (45%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V Q+LS + L++VKKG+ D+PGLTDT   R  GPKRAS I+KL+NL K+DDVRQYV   +
Sbjct: 102 VDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VK 159

Query: 495 RSFTNKKGKTV-SKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLK 319
           R    K GK   +KAPKIQRL+TP+ +Q                K   AEY K+L  R +
Sbjct: 160 RPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRR 219

Query: 318 EQRDRRSESMAKRRSKLS 265
           ++R RR   ++  R   S
Sbjct: 220 QERIRRRSRLSSMRDSRS 237

>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6|
          Length = 236

 Score =  108 bits (271), Expect = 1e-23
 Identities = 63/136 (46%), Positives = 85/136 (62%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  DL+V++LVIVKKG+ +L G+TD   P+  GPKRA+ I+K F L K+DDVR +V   R
Sbjct: 102 VGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV--IR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R  T K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA+RL E
Sbjct: 160 REVT-KGEKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAE 218

Query: 315 QRDRRSESMAKRRSKL 268
           ++  ++E+  +R S L
Sbjct: 219 RKAEKAETRKRRASSL 234

>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6|
          Length = 246

 Score =  107 bits (267), Expect = 3e-23
 Identities = 63/137 (45%), Positives = 85/137 (62%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  ++S ++LVIVKKG  ++ GLTD+  PR  GPKRASKI+KLFNL K DDV +YV T+ 
Sbjct: 102 VDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHD 161

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           ++F +   KT+  APKIQRL+TP  I                 + +AA Y KLLA+  KE
Sbjct: 162 KTFPDGVTKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKE 219

Query: 315 QRDRRSESMAKRRSKLS 265
           + D +   +A+RRS  S
Sbjct: 220 EHDAK---IARRRSSAS 233

>RS6_KLULA (Q6CM04) 40S ribosomal protein S6|
          Length = 236

 Score =  103 bits (257), Expect = 5e-22
 Identities = 59/136 (43%), Positives = 82/136 (60%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  DL+V+ L+I KKG+ ++ G+T+   P+  GPKRA+ I+K F L K+DDVR YV   R
Sbjct: 102 VGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV--IR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R  T K  K+ +KAPKIQRLVTP  +Q                +  AAEY +LLA+RL E
Sbjct: 160 REVT-KGDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSE 218

Query: 315 QRDRRSESMAKRRSKL 268
           ++  ++E   +R S L
Sbjct: 219 RKAEKAEVRKRRASSL 234

>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6|
          Length = 236

 Score =  103 bits (256), Expect = 6e-22
 Identities = 59/136 (43%), Positives = 80/136 (58%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  DL+V+ L+I KKG  ++ G+T+   P+  GPKRA+ I+K F L KDDDVR +V   R
Sbjct: 102 VGPDLAVLALIITKKGDQEIEGITNESVPKRLGPKRANNIRKFFGLTKDDDVRDFV--IR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R    K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA+RL E
Sbjct: 160 REVV-KGDKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLTE 218

Query: 315 QRDRRSESMAKRRSKL 268
           ++  ++E   +R S L
Sbjct: 219 KKAEKAEERKRRASSL 234

>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)|
          Length = 235

 Score =  101 bits (251), Expect = 2e-21
 Identities = 63/136 (46%), Positives = 81/136 (59%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           V  DL+V+ LVIVKKG  ++ G+T+   P+  GPKRA+ I+K F L K+DDVR YV   R
Sbjct: 102 VGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV--IR 159

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLAQRLKE 316
           R  T K  KT +KAPKIQRLVTP  +Q                +  AAEY +LLA+RL E
Sbjct: 160 REVT-KGEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAE 218

Query: 315 QRDRRSESMAKRRSKL 268
              R++E   +R S L
Sbjct: 219 ---RKAEVRKRRASSL 231

>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6|
          Length = 249

 Score = 89.4 bits (220), Expect = 9e-18
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           ++ D++++N+ I K G   + G+TDT  PR  GPKRASKI+KLFNL + +DVR+YV   R
Sbjct: 105 LASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VR 162

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA--QRL 322
           R       K   KAPKIQRL+TP                     +E  EY +L+A  +R 
Sbjct: 163 RRVVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRA 222

Query: 321 KEQRDRRSESMAK 283
             QRD   +   K
Sbjct: 223 LRQRDHSKKHTRK 235

>RS6_LEIIN (O44012) 40S ribosomal protein S6|
          Length = 249

 Score = 89.4 bits (220), Expect = 9e-18
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           ++ D++++N+ I K G   + G+TDT  PR  GPKRASKI+KLFNL + +DVR+YV   R
Sbjct: 105 LASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYV--VR 162

Query: 495 RSFTNKKGKTVSKAPKIQRLVTPLTIQXXXXXXXXXXXXXXXXKSEAAEYQKLLA--QRL 322
           R       K   KAPKIQRL+TP                     +E  EY +L+A  +R 
Sbjct: 163 RRVVKSGKKDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRA 222

Query: 321 KEQRDRRSESMAK 283
             QRD   +   K
Sbjct: 223 LRQRDHSKKHTQK 235

>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6|
          Length = 203

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/78 (29%), Positives = 44/78 (56%)
 Frame = -1

Query: 675 VSQDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKIKKLFNLGKDDDVRQYVNTYR 496
           VS+++ V+NL+I++ G+ ++ GLT+        P++  K++K+F  G  D+ +  V  Y 
Sbjct: 87  VSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMF--GVPDEEKNVVG-YI 143

Query: 495 RSFTNKKGKTVSKAPKIQ 442
           R+    +     K PKI+
Sbjct: 144 RNILKSECDDPKKIPKIR 161

>YBK7_YEAST (P38162) Protein YBL107C|
          Length = 196

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 624 NDLPGLTDTEKPRMR--GPKRASKIKKLFNLGKDDDVRQYVNTYRRSFTNKKGK 469
           ND P LT     R R   P       +    G DD +RQ +N YR+   N K K
Sbjct: 23  NDEPSLTTITVTRERCVDPSLIDSFLRFLRHGSDDIIRQKLNNYRKGSINGKNK 76

>DNPEP_CAEEL (Q19087) Putative aspartyl aminopeptidase (EC 3.4.11.21)|
          Length = 470

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = -1

Query: 669 QDLSVINLVIVKKGKNDLPGLTDTEKPRMRGPKRASKI---KKLFNLGKDDDVRQYVNTY 499
           +DLSV  LVIVK G+     L D +KP +  P  A  +   +  F    + ++R  + T+
Sbjct: 130 RDLSVAGLVIVKNGEKLQHKLIDVKKPVLFIPNLAIHLETDRTTFKPNTETELRPILETF 189

Query: 498 RRSFTNKKGKTVS 460
             +  N   K  S
Sbjct: 190 AAAGINAPQKPES 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,842,652
Number of Sequences: 219361
Number of extensions: 1387284
Number of successful extensions: 4212
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4177
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)