ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 264 3e-67
4emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa... 264 3e-67
5gb|AY111008.1| Zea mays CL30631_-2 mRNA sequence 178 1e-41
6gb|AY112306.1| Zea mays CL30631_-1 mRNA sequence 76 2e-10
7ref|XM_810663.1| Trypanosoma cruzi strain CL Brener dynein light... 44 0.55
8gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosom... 42 2.2
9emb|BX957221.1| Methanococcus maripaludis S2 complete genome; se... 42 2.2
10gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosom... 42 2.2
11gb|AY105740.1| Zea mays PCO079161 mRNA sequence 42 2.2
12gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, com... 42 2.2
13gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.6
14gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.6
15gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, com... 40 8.6
16gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.6
17gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosom... 40 8.6
18gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complet... 40 8.6
19gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complet... 40 8.6
20ref|NM_001037343.1| Homo sapiens cyclin-dependent kinase-like 5 ... 40 8.6
21ref|NM_003159.2| Homo sapiens cyclin-dependent kinase-like 5 (CD... 40 8.6
22emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 o... 40 8.6
23emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chr... 40 8.6
24emb|AL355597.19| Human DNA sequence from clone RP11-358N3 on chr... 40 8.6
25emb|AL050316.15|HSDJ911I5 Human DNA sequence from clone RP5-911I... 40 8.6
26ref|XM_962629.1| PREDICTED: Tribolium castaneum similar to CG909... 40 8.6
27gb|AC112509.4| Homo sapiens 3 BAC RP11-428B17 (Roswell Park Canc... 40 8.6
28emb|Y15057.1|HSTXP3 Homo sapiens mRNA for STK9 protein 40 8.6
29emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.6
30emb|BX321859.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 8.6
31gb|AY217744.1| Homo sapiens serine/threonine kinase 9 (CDKL5) mR... 40 8.6
32gb|BC036091.1| Homo sapiens cyclin-dependent kinase-like 5, mRNA... 40 8.6
33dbj|AK124274.1| Homo sapiens cDNA FLJ42280 fis, clone TLIVE2003197 40 8.6
34gb|AF312913.1|AF312913 Homo sapiens chromosome 20 clone h119, co... 40 8.6
35gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complet... 40 8.6
36gb|AC154610.3| Mus musculus BAC clone RP23-335A11 from chromosom... 40 8.6
37gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromos... 40 8.6
38ref|NM_207503.1| Homo sapiens FLJ42280 protein (FLJ42280), mRNA 40 8.6
39gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 8.6
40emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 ma... 40 8.6 
>dbj|AK060492.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C10, full
            insert sequence
          Length = 1723

 Score =  355 bits (179), Expect = 1e-94
 Identities = 299/339 (88%)
 Strand = Plus / Minus

                                                                        
Query: 281  tccttgtagacaagaggcttgttgacccatctgatgcggcagccgcaggcttgcagaagc 340
            ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| | |
Sbjct: 1136 tccttgtagacaagaggcttgttgacccaacggatgcggcagccgcaggcctgcagcatc 1077

                                                                        
Query: 341  tggagcaggtcaggggatagcacggacttcaaaccgccgagtatcttcagcttcttcagc 400
            |||||||| ||||| || ||||| |||||||  || |  || |||||||| |||||||||
Sbjct: 1076 tggagcagctcaggagacagcacagacttcagcccactcagcatcttcagtttcttcagc 1017

                                                                        
Query: 401  ctcccgcaagcggctcgcagagccatctcgaacccttctatggaaacccatgacaggtgc 460
            ||||||||||| |||| ||| |||||||||||||||||||| || |||||||| ||||| 
Sbjct: 1016 ctcccgcaagccgctctcagtgccatctcgaacccttctatagagacccatgagaggtgt 957

                                                                        
Query: 461  accatcttcacgtcctggaggcacctcaaggagctaagcaggtggcacaagcctaggcca 520
            |||||||| || |||||||||||||||| |||||| | |||||| |||| ||| ||||||
Sbjct: 956  accatcttaacatcctggaggcacctcagggagcttaacaggtgacacaggcccaggcca 897

                                                                        
Query: 521  gtaacttggcagtatgatatggtgagctgtctaaggtttagagcatatcgggcaagagcc 580
            || ||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct: 896  gtgacttggcagtatgatatagtaagctgtctaaggtttagtgcatatcgggcaagagcc 837

                                                   
Query: 581  catagcccagaatcatcgacagaatagcagcgcttcaag 619
            || |  |||| |||||||||||||||||| |||||||||
Sbjct: 836  cacaagccagcatcatcgacagaatagcaacgcttcaag 798
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  264 bits (133), Expect = 3e-67
 Identities = 235/269 (87%)
 Strand = Plus / Minus

                                                                            
Query: 281      tccttgtagacaagaggcttgttgacccatctgatgcggcagccgcaggcttgcagaagc 340
                ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| | |
Sbjct: 22495001 tccttgtagacaagaggcttgttgacccaacggatgcggcagccgcaggcctgcagcatc 22494942

                                                                            
Query: 341      tggagcaggtcaggggatagcacggacttcaaaccgccgagtatcttcagcttcttcagc 400
                |||||||| ||||| || ||||| |||||||  || |  || |||||||| |||||||||
Sbjct: 22494941 tggagcagctcaggagacagcacagacttcagcccactcagcatcttcagtttcttcagc 22494882

                                                                            
Query: 401      ctcccgcaagcggctcgcagagccatctcgaacccttctatggaaacccatgacaggtgc 460
                ||||||||||| |||| ||| |||||||||||||||||||| || |||||||| ||||| 
Sbjct: 22494881 ctcccgcaagccgctctcagtgccatctcgaacccttctatagagacccatgagaggtgt 22494822

                                                                            
Query: 461      accatcttcacgtcctggaggcacctcaaggagctaagcaggtggcacaagcctaggcca 520
                |||||||| || |||||||||||||||| |||||| | |||||| |||| ||| ||||||
Sbjct: 22494821 accatcttaacatcctggaggcacctcagggagcttaacaggtgacacaggcccaggcca 22494762

                                             
Query: 521      gtaacttggcagtatgatatggtgagctg 549
                || ||||||||||||||||| || |||||
Sbjct: 22494761 gtgacttggcagtatgatatagtaagctg 22494733



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 547      ctgtctaaggtttagagcatatcgggcaagagcccatagcccagaatcatcgacagaata 606
                ||||||||||||||| |||||||||||||||||||| |  |||| |||||||||||||||
Sbjct: 22494652 ctgtctaaggtttagtgcatatcgggcaagagcccacaagccagcatcatcgacagaata 22494593

                             
Query: 607      gcagcgcttcaag 619
                ||| |||||||||
Sbjct: 22494592 gcaacgcttcaag 22494580
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  264 bits (133), Expect = 3e-67
 Identities = 235/269 (87%)
 Strand = Plus / Minus

                                                                            
Query: 281      tccttgtagacaagaggcttgttgacccatctgatgcggcagccgcaggcttgcagaagc 340
                ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| | |
Sbjct: 22423346 tccttgtagacaagaggcttgttgacccaacggatgcggcagccgcaggcctgcagcatc 22423287

                                                                            
Query: 341      tggagcaggtcaggggatagcacggacttcaaaccgccgagtatcttcagcttcttcagc 400
                |||||||| ||||| || ||||| |||||||  || |  || |||||||| |||||||||
Sbjct: 22423286 tggagcagctcaggagacagcacagacttcagcccactcagcatcttcagtttcttcagc 22423227

                                                                            
Query: 401      ctcccgcaagcggctcgcagagccatctcgaacccttctatggaaacccatgacaggtgc 460
                ||||||||||| |||| ||| |||||||||||||||||||| || |||||||| ||||| 
Sbjct: 22423226 ctcccgcaagccgctctcagtgccatctcgaacccttctatagagacccatgagaggtgt 22423167

                                                                            
Query: 461      accatcttcacgtcctggaggcacctcaaggagctaagcaggtggcacaagcctaggcca 520
                |||||||| || |||||||||||||||| |||||| | |||||| |||| ||| ||||||
Sbjct: 22423166 accatcttaacatcctggaggcacctcagggagcttaacaggtgacacaggcccaggcca 22423107

                                             
Query: 521      gtaacttggcagtatgatatggtgagctg 549
                || ||||||||||||||||| || |||||
Sbjct: 22423106 gtgacttggcagtatgatatagtaagctg 22423078



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 547      ctgtctaaggtttagagcatatcgggcaagagcccatagcccagaatcatcgacagaata 606
                ||||||||||||||| |||||||||||||||||||| |  |||| |||||||||||||||
Sbjct: 22422997 ctgtctaaggtttagtgcatatcgggcaagagcccacaagccagcatcatcgacagaata 22422938

                             
Query: 607      gcagcgcttcaag 619
                ||| |||||||||
Sbjct: 22422937 gcaacgcttcaag 22422925
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>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183414

 Score =  264 bits (133), Expect = 3e-67
 Identities = 235/269 (87%)
 Strand = Plus / Plus

                                                                         
Query: 281   tccttgtagacaagaggcttgttgacccatctgatgcggcagccgcaggcttgcagaagc 340
             ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| | |
Sbjct: 12533 tccttgtagacaagaggcttgttgacccaacggatgcggcagccgcaggcctgcagcatc 12592

                                                                         
Query: 341   tggagcaggtcaggggatagcacggacttcaaaccgccgagtatcttcagcttcttcagc 400
             |||||||| ||||| || ||||| |||||||  || |  || |||||||| |||||||||
Sbjct: 12593 tggagcagctcaggagacagcacagacttcagcccactcagcatcttcagtttcttcagc 12652

                                                                         
Query: 401   ctcccgcaagcggctcgcagagccatctcgaacccttctatggaaacccatgacaggtgc 460
             ||||||||||| |||| ||| |||||||||||||||||||| || |||||||| ||||| 
Sbjct: 12653 ctcccgcaagccgctctcagtgccatctcgaacccttctatagagacccatgagaggtgt 12712

                                                                         
Query: 461   accatcttcacgtcctggaggcacctcaaggagctaagcaggtggcacaagcctaggcca 520
             |||||||| || |||||||||||||||| |||||| | |||||| |||| ||| ||||||
Sbjct: 12713 accatcttaacatcctggaggcacctcagggagcttaacaggtgacacaggcccaggcca 12772

                                          
Query: 521   gtaacttggcagtatgatatggtgagctg 549
             || ||||||||||||||||| || |||||
Sbjct: 12773 gtgacttggcagtatgatatagtaagctg 12801



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                         
Query: 547   ctgtctaaggtttagagcatatcgggcaagagcccatagcccagaatcatcgacagaata 606
             ||||||||||||||| |||||||||||||||||||| |  |||| |||||||||||||||
Sbjct: 12882 ctgtctaaggtttagtgcatatcgggcaagagcccacaagccagcatcatcgacagaata 12941

                          
Query: 607   gcagcgcttcaag 619
             ||| |||||||||
Sbjct: 12942 gcaacgcttcaag 12954
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>gb|AY111008.1| Zea mays CL30631_-2 mRNA sequence
          Length = 548

 Score =  178 bits (90), Expect = 1e-41
 Identities = 150/170 (88%)
 Strand = Plus / Plus

                                                                       
Query: 281 tccttgtagacaagaggcttgttgacccatctgatgcggcagccgcaggcttgcagaagc 340
           |||||||||||||||||||||||||||||||| || |||||||| || || ||||| | |
Sbjct: 379 tccttgtagacaagaggcttgttgacccatcttattcggcagccacaagcctgcagcatc 438

                                                                       
Query: 341 tggagcaggtcaggggatagcacggacttcaaaccgccgagtatcttcagcttcttcagc 400
           ||||| || |||||||| ||||||| |||||  |||| ||| ||||||||||||||||||
Sbjct: 439 tggaggagctcaggggagagcacggtcttcagcccgcagagcatcttcagcttcttcagc 498

                                                             
Query: 401 ctcccgcaagcggctcgcagagccatctcgaacccttctatggaaaccca 450
           |||||||| || ||||||||||||||||| ||||||||||| || |||||
Sbjct: 499 ctcccgcaggctgctcgcagagccatctcaaacccttctattgagaccca 548
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>gb|AY112306.1| Zea mays CL30631_-1 mRNA sequence
          Length = 581

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                       
Query: 282 ccttgtagacaagaggcttgttgacccatctgatgcggcagccgcaggcttgcagaagct 341
           ||||| ||||||||||||||||||||||||| || |||||||| || || ||||| | ||
Sbjct: 477 ccttggagacaagaggcttgttgacccatcttattcggcagccacacgcctgcagcatct 536

                                         
Query: 342 ggagcaggtcaggggatagcacggacttca 371
           |||  || |||||||| ||||||| |||||
Sbjct: 537 ggatgagttcaggggacagcacggtcttca 566
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>ref|XM_810663.1| Trypanosoma cruzi strain CL Brener dynein light chain
           (Tc00.1047053506203.20) partial mRNA
          Length = 768

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 379 gagtatcttcagcttcttcagc 400
           ||||||||||||||||||||||
Sbjct: 414 gagtatcttcagcttcttcagc 393
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>gb|AC126024.3| Mus musculus BAC clone RP24-423I20 from chromosome 1, complete sequence
          Length = 177041

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 385   cttcagcttcttcagcctccc 405
             |||||||||||||||||||||
Sbjct: 45305 cttcagcttcttcagcctccc 45285
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>emb|BX957221.1| Methanococcus maripaludis S2 complete genome; segment 3/5
          Length = 348230

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 236    ttgccgaaaggatgaacaata 256
              |||||||||||||||||||||
Sbjct: 219025 ttgccgaaaggatgaacaata 219045
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>gb|AC153647.4| Mus musculus BAC clone RP24-396E16 from chromosome 1, complete sequence
          Length = 177775

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 385   cttcagcttcttcagcctccc 405
             |||||||||||||||||||||
Sbjct: 99134 cttcagcttcttcagcctccc 99114
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>gb|AY105740.1| Zea mays PCO079161 mRNA sequence
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 526 ttggcagtatgatatggtgagctgtctaaggtt 558
           ||||||||| ||||| || ||||||||||||||
Sbjct: 749 ttggcagtacgatatcgtaagctgtctaaggtt 717
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>gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, complete sequence
          Length = 173706

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   cttcagcttcttcagcctccc 405
             |||||||||||||||||||||
Sbjct: 73401 cttcagcttcttcagcctccc 73421
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 317     cggcagccgcaggcttgcagaagc 340
               |||||||||||||||| |||||||
Sbjct: 2345288 cggcagccgcaggcttccagaagc 2345265
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     ccatctgatgcggcagccgc 326
               ||||||||||||||||||||
Sbjct: 3307786 ccatctgatgcggcagccgc 3307805
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>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence
          Length = 218644

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     acaactctgctatgcaaaag 52
              ||||||||||||||||||||
Sbjct: 206110 acaactctgctatgcaaaag 206091
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    ccatctgatgcggcagccgc 326
              ||||||||||||||||||||
Sbjct: 677840 ccatctgatgcggcagccgc 677821
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>gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosome 7, complete sequence
          Length = 195041

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   taagcaggtggcacaagcct 514
             ||||||||||||||||||||
Sbjct: 67666 taagcaggtggcacaagcct 67647
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>gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complete sequence
          Length = 99374

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  aggcttgttgacccatctga 314
            ||||||||||||||||||||
Sbjct: 2389 aggcttgttgacccatctga 2370
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>gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complete sequence
          Length = 148930

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    acaactctgctatgcaaaag 52
             ||||||||||||||||||||
Sbjct: 12570 acaactctgctatgcaaaag 12589
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>ref|NM_001037343.1| Homo sapiens cyclin-dependent kinase-like 5 (CDKL5), transcript
            variant II, mRNA
          Length = 3430

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  cagccgcaggcttgcagaag 339
            ||||||||||||||||||||
Sbjct: 3362 cagccgcaggcttgcagaag 3343
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>ref|NM_003159.2| Homo sapiens cyclin-dependent kinase-like 5 (CDKL5), transcript
            variant I, mRNA
          Length = 3434

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  cagccgcaggcttgcagaag 339
            ||||||||||||||||||||
Sbjct: 3366 cagccgcaggcttgcagaag 3347
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>emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 on chromosome Xp22.11-22.2
              Contains the 3' end of the CDKL5 gene for cyclin-dependent
              kinase-like 5, the 3' end of the RS1 gene for retinoschisis
              (X-linked, juvenile) 1, and a gap junction protein, alpha
              2, 38kDa (connexin 38) (GJA2) pseudogene, complete sequence
          Length = 145538

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    cagccgcaggcttgcagaag 339
              ||||||||||||||||||||
Sbjct: 134047 cagccgcaggcttgcagaag 134028
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>emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chromosome 6 Contains part of
              the UTRN gene for utrophin (homologous to dystrophin) (DRP,
              DRP1, DMDL). Contains two CpG islands, complete sequence
          Length = 129479

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gtgtagttattgtgaatttt 207
              ||||||||||||||||||||
Sbjct: 121763 gtgtagttattgtgaatttt 121782
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>emb|AL355597.19| Human DNA sequence from clone RP11-358N3 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 89340

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   cttcagcttcttcagcctcc 404
             ||||||||||||||||||||
Sbjct: 13175 cttcagcttcttcagcctcc 13156
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>emb|AL050316.15|HSDJ911I5 Human DNA sequence from clone RP5-911I5 on chromosome 20q13.11-13.2
           Contains ESTs, STSs and GSSs, complete sequence
          Length = 72289

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 atggcatccttgtagacaag 294
           ||||||||||||||||||||
Sbjct: 817 atggcatccttgtagacaag 836
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>ref|XM_962629.1| PREDICTED: Tribolium castaneum similar to CG9092-PA (LOC656078), mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  aacaatatggtacttctcag 269
            ||||||||||||||||||||
Sbjct: 1023 aacaatatggtacttctcag 1004
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>gb|AC112509.4| Homo sapiens 3 BAC RP11-428B17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110001

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    acaactctgctatgcaaaag 52
             ||||||||||||||||||||
Sbjct: 56987 acaactctgctatgcaaaag 56968
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>emb|Y15057.1|HSTXP3 Homo sapiens mRNA for STK9 protein
          Length = 3399

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  cagccgcaggcttgcagaag 339
            ||||||||||||||||||||
Sbjct: 3334 cagccgcaggcttgcagaag 3315
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    ccatctgatgcggcagccgc 326
              ||||||||||||||||||||
Sbjct: 486477 ccatctgatgcggcagccgc 486458
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>emb|BX321859.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 4/10
          Length = 316050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgacaaacttgccgaaagga 247
             ||||||||||||||||||||
Sbjct: 64244 tgacaaacttgccgaaagga 64263
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>gb|AY217744.1| Homo sapiens serine/threonine kinase 9 (CDKL5) mRNA, complete cds
          Length = 3399

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  cagccgcaggcttgcagaag 339
            ||||||||||||||||||||
Sbjct: 3334 cagccgcaggcttgcagaag 3315
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>gb|BC036091.1| Homo sapiens cyclin-dependent kinase-like 5, mRNA (cDNA clone
            MGC:33802 IMAGE:5295038), complete cds
          Length = 3441

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  cagccgcaggcttgcagaag 339
            ||||||||||||||||||||
Sbjct: 3362 cagccgcaggcttgcagaag 3343
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>dbj|AK124274.1| Homo sapiens cDNA FLJ42280 fis, clone TLIVE2003197
          Length = 2707

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  aggcttgttgacccatctga 314
            ||||||||||||||||||||
Sbjct: 1698 aggcttgttgacccatctga 1717
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>gb|AF312913.1|AF312913 Homo sapiens chromosome 20 clone h119, complete sequence
          Length = 122951

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   atggcatccttgtagacaag 294
             ||||||||||||||||||||
Sbjct: 86990 atggcatccttgtagacaag 86971
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>gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complete sequence
          Length = 130618

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    ctcaaggagctaagcaggtg 504
              ||||||||||||||||||||
Sbjct: 119154 ctcaaggagctaagcaggtg 119173
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>gb|AC154610.3| Mus musculus BAC clone RP23-335A11 from chromosome 13, complete
             sequence
          Length = 201893

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   atgatcttgaccacacctta 168
             ||||||||||||||||||||
Sbjct: 35100 atgatcttgaccacacctta 35119
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>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence
          Length = 197136

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     acaactctgctatgcaaaag 52
              ||||||||||||||||||||
Sbjct: 166608 acaactctgctatgcaaaag 166589
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>ref|NM_207503.1| Homo sapiens FLJ42280 protein (FLJ42280), mRNA
          Length = 2707

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  aggcttgttgacccatctga 314
            ||||||||||||||||||||
Sbjct: 1698 aggcttgttgacccatctga 1717
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     tcttcagcttcttcagcctc 403
               ||||||||||||||||||||
Sbjct: 3126705 tcttcagcttcttcagcctc 3126686
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>emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete sequence
          Length = 145822

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    cagccgcaggcttgcagaag 339
              ||||||||||||||||||||
Sbjct: 130062 cagccgcaggcttgcagaag 130081


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,917,758
Number of Sequences: 3902068
Number of extensions: 4917758
Number of successful extensions: 97305
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97064
Number of HSP's gapped (non-prelim): 237
length of query: 631
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 608
effective length of database: 17,143,297,704
effective search space: 10423125004032
effective search space used: 10423125004032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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