ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB079636.1| Oryza sativa (japonica cultivar-group) OsHMGB2 m... 252 1e-63
2emb|Y08297.1|ZMHMGC1 Z.mays mRNA for HMGc1 protein 151 4e-33
3gb|AF440222.1| Zea mays cultivar B73 HMG-like nucleosome/chromat... 143 9e-31
4emb|Y08298.1|ZMHMGC2 Z.mays mRNA for HMGc2 protein 127 5e-26
5gb|BT016444.1| Zea mays clone Contig277 mRNA sequence 103 7e-19
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
7dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
8dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
9emb|AJ131374.1|ZMA131374 Zea mays hmgc1 gene, exons 1-7 86 2e-13
10gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D p... 48 0.038
11emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group prot... 48 0.038
12emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4,... 48 0.038
13emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 48 0.038
14gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleos... 48 0.038
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
16gb|AY108096.1| Zea mays PCO136722 mRNA sequence 48 0.038
17emb|AJ006708.1|ZMA6708 Zea mays HMGe gene 46 0.15
18gb|AY105190.1| Zea mays PCO097256 mRNA sequence 46 0.15
19ref|XM_460929.1| Debaryomyces hansenii CBS767 hypothetical prote... 44 0.60
20emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 44 0.60
21dbj|AP002832.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.60
22emb|AL844845.7| Mouse DNA sequence from clone RP23-155C1 on chro... 44 0.60
23gb|AC140351.2| Mus musculus BAC clone RP24-258E8 from chromosome... 42 2.4
24gb|BC010197.1| Mus musculus carboxypeptidase E, mRNA (cDNA clone... 42 2.4
25gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome... 42 2.4
26ref|XM_976304.1| PREDICTED: Mus musculus carboxypeptidase E (Cpe... 42 2.4
27gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, compl... 42 2.4
28ref|NM_013494.2| Mus musculus carboxypeptidase E (Cpe), mRNA 42 2.4
29emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on ... 42 2.4
30gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.4
31emb|X61232.1|MMCBXPEPH Mouse mRNA for carboxypeptidase H 42 2.4
32dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 42 2.4
33dbj|AK160097.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 42 2.4
34dbj|AK047891.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 2.4
35dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
36gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) ... 42 2.4
37emb|AL592214.14| Mouse DNA sequence from clone RP23-212I24 on ch... 42 2.4
38gb|AC005104.1| Homo sapiens BAC clone CTA-442F18 from 2, complet... 42 2.4
39gb|AC152168.2| Mus musculus BAC clone RP23-96H18 from chromosome... 42 2.4
40dbj|AK209525.1| Mus musculus cDNA, clone:Y2G0115G07, strand:minu... 42 2.4
41emb|AJ337604.1|HSA337604 Homo sapiens genomic sequence surroundi... 42 2.4
42emb|AJ337239.1|HSA337239 Homo sapiens genomic sequence surroundi... 42 2.4
43emb|AJ337191.1|HSA337191 Homo sapiens genomic sequence surroundi... 42 2.4
44emb|AJ337085.1|HSA337085 Homo sapiens genomic sequence surroundi... 42 2.4
45gb|U23184.1|MMU23184 Mus musculus musculus carboxypeptidase E (C... 42 2.4
46gb|AF095748.1|AF095748 Burkholderia cepacia principal sigma fact... 42 2.4
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
48emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.4
49gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complet... 42 2.4
50emb|AJ343462.1|HSA343462 Homo sapiens genomic sequence surroundi... 42 2.4
51ref|XM_637534.1| Dictyostelium discoideum hypothetical protein (... 40 9.3
52ref|XM_468609.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
53ref|XM_479144.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.3
54ref|XM_365427.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.3
55ref|XM_677334.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.3
56gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.3
57gb|AC159708.13| Mus musculus 10 BAC RP23-110M21 (Roswell Park Ca... 40 9.3
58gb|AY282923.1| Strongylocentrotus purpuratus polycystic kidney d... 40 9.3
59gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124... 40 9.3
60ref|XR_003508.1| PREDICTED: Mus musculus similar to Alpha-enolas... 40 9.3
61ref|XR_001977.1| PREDICTED: Mus musculus similar to Alpha-enolas... 40 9.3
62gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 ... 40 9.3
63gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's ... 40 9.3
64ref|XM_751756.1| Ustilago maydis 521 hypothetical protein (UM007... 40 9.3
65gb|AC115117.5| Mus musculus BAC clone RP23-76J12 from chromosome... 40 9.3
66emb|AJ890015.1| Triticum aestivum partial mRNA for putative high... 40 9.3
67gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Can... 40 9.3
68gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 9.3
69gb|U70480.1|LEU70480 Lycopersicon esculentum abscission polygala... 40 9.3
70ref|XM_785429.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.3
71emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein 40 9.3
72ref|XM_781060.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.3
73gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.3
74gb|AY082396.1| Zea mays knotted1-interacting protein (kip) mRNA,... 40 9.3
75gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.3
76ref|NM_135461.2| Drosophila melanogaster CG4364-RA (CG4364), mRNA 40 9.3
77gb|AY069545.1| Drosophila melanogaster LD27336 full length cDNA 40 9.3
78gb|AC182755.1| Gasterosteus aculeatus clone VMRC28-49K03, comple... 40 9.3
79gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genom... 40 9.3
80gb|AC018608.9|AC018608 Homo sapiens chromosome 8, clone RP11-403... 40 9.3
81dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
82dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
83dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
84gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, ... 40 9.3
85gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, com... 40 9.3
86ref|NM_214662.1| Strongylocentrotus purpuratus polycystic kidney... 40 9.3
87ref|XM_214456.3| PREDICTED: Rattus norvegicus similar to Alpha e... 40 9.3
88dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
89dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.3
90dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
91dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
92dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
93dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
94gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35... 40 9.3
95gb|AC167686.2| Daphnia pulex clone JGIAZSN-5K3, complete sequence 40 9.3
96gb|AF001001.1|AF001001 Lycopersicon esculentum polygalacturonase... 40 9.3
97emb|BX004791.6| Mouse DNA sequence from clone RP24-233L10 on chr... 40 9.3
98emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobi... 40 9.3 
>dbj|AB079636.1| Oryza sativa (japonica cultivar-group) OsHMGB2 mRNA for high
           mobility group box protein 2, complete cds
          Length = 634

 Score =  252 bits (127), Expect = 1e-63
 Identities = 255/297 (85%), Gaps = 3/297 (1%)
 Strand = Plus / Minus

                                                                       
Query: 387 ctctccttgttctcgaagctggctttggtcttctcatagtcctgcttcttctgtccagcc 446
           |||||||| || |||||| |||| ||||||||||| |||||||||||||| || ||||||
Sbjct: 439 ctctccttcttatcgaagttggccttggtcttctcgtagtcctgcttcttttggccagcc 380

                                                                       
Query: 447 ttctccacataaggtgctttgtcctcatcagacatagatctccacttctcacctgcagcc 506
           || |||||||||||||| || || |  |||||||||| || ||||||||| |||||||||
Sbjct: 379 ttgtccacataaggtgccttctcttgctcagacatagctcgccacttctcccctgcagcc 320

                                                                       
Query: 507 ttgctcacgttggcgacattcttgttgttggggttctccgcgttgtactgctgcctgaag 566
           |||||||||  ||||||| ||||||||   || | | | || | ||||| ||||||||| 
Sbjct: 319 ttgctcacggcggcgacactcttgttgccaggatgcgctgcctggtactcctgcctgaac 260

                                                                       
Query: 567 tcagacatgaagacgaagaaggcggagggcgggcgcttgggcttgccagcggcagcggcg 626
           |||||||||||||||||||| || || ||||||||||| ||||||||   |  |||||||
Sbjct: 259 tcagacatgaagacgaagaaagcagacggcgggcgcttcggcttgcc---gctagcggcg 203

                                                                    
Query: 627 gccttcttcctcttgctggcgccgccggcggccttgagcctgccctcgcccttcttg 683
           |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gccttcttccgcttcccggcgccgccggcggccttgagcctgccctcgcccttcttg 146



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 267 ggatacactatttactcatcgtcgtcttcattatcctcatcgctacc 313
           ||||||||||||||||| || ||||| ||||| ||||||||||||||
Sbjct: 571 ggatacactatttactcttcatcgtcctcattttcctcatcgctacc 525
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>emb|Y08297.1|ZMHMGC1 Z.mays mRNA for HMGc1 protein
          Length = 784

 Score =  151 bits (76), Expect = 4e-33
 Identities = 267/330 (80%), Gaps = 3/330 (0%)
 Strand = Plus / Minus

                                                                       
Query: 354 tcatcctgagtcttggccttcttggagctcacactctccttgttctcgaagctggctttg 413
           ||||||| |||||| |||||||| |||||    |||||||| || || ||| | || || 
Sbjct: 438 tcatcctcagtcttagccttctttgagcttgtgctctccttcttatcaaagtttgcctta 379

                                                                       
Query: 414 gtcttctcatagtcctgcttcttctgtccagccttctccacataaggtgctttgtcctca 473
           |||||||||||||||||||||||||||||||| |  |||||||| |||   || || | |
Sbjct: 378 gtcttctcatagtcctgcttcttctgtccagcttggtccacatatggttgcttctcttga 319

                                                                       
Query: 474 tcagacatagatctccacttctcacctgcagccttgctcacgttggcgacattcttgttg 533
           || |||||||  | |||||| || ||||| |||||||||||| | || ||  ||||||||
Sbjct: 318 tctgacatagcacgccacttttcccctgctgccttgctcacggtcgcaacgctcttgttg 259

                                                                       
Query: 534 ttggggttctccgcgttgtactgctgcctgaagtcagacatgaagacgaagaaggcggag 593
              |||| |  ||| |  |||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 258 ccagggtgcagcgcctgatactcctgcctgaattcagacatgaagacgaagaaggcggag 199

                                                                       
Query: 594 ggcgggcgcttgggcttgccagcggcagcggcggccttcttcctcttgctggcgccgccg 653
           |||||||||||||||||||   ||   |||||||||||||| | ||| | |||| |||||
Sbjct: 198 ggcgggcgcttgggcttgc---cgctcgcggcggccttcttgcgctttccggcggcgccg 142

                                         
Query: 654 gcggccttgagcctgccctcgcccttcttg 683
            | |||  ||||||||||||| ||||||||
Sbjct: 141 cccgcccggagcctgccctcgtccttcttg 112
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>gb|AF440222.1| Zea mays cultivar B73 HMG-like nucleosome/chromatin assembly factor
           D (nfd104) mRNA, complete cds
          Length = 795

 Score =  143 bits (72), Expect = 9e-31
 Identities = 266/330 (80%), Gaps = 3/330 (0%)
 Strand = Plus / Minus

                                                                       
Query: 354 tcatcctgagtcttggccttcttggagctcacactctccttgttctcgaagctggctttg 413
           ||||||| |||||| |||||||| |||||    |||||||| || || ||| | || || 
Sbjct: 441 tcatcctcagtcttagccttctttgagcttgtgctctccttcttatcaaagtttgcctta 382

                                                                       
Query: 414 gtcttctcatagtcctgcttcttctgtccagccttctccacataaggtgctttgtcctca 473
           |||||||||||||||||||||||||||||||| |  |||||||| |||   || || | |
Sbjct: 381 gtcttctcatagtcctgcttcttctgtccagcttggtccacatatggttgcttctcttga 322

                                                                       
Query: 474 tcagacatagatctccacttctcacctgcagccttgctcacgttggcgacattcttgttg 533
           || |||||||  | |||||| || ||||| |||||||||||| | || ||  ||||||||
Sbjct: 321 tctgacatagcacgccacttttcccctgctgccttgctcacggtcgcaacgctcttgttg 262

                                                                       
Query: 534 ttggggttctccgcgttgtactgctgcctgaagtcagacatgaagacgaagaaggcggag 593
              |||| |  ||| |  |||| ||||||||| |||||||||||| ||||||||||||||
Sbjct: 261 ccagggtgcagcgcctgatactcctgcctgaattcagacatgaaggcgaagaaggcggag 202

                                                                       
Query: 594 ggcgggcgcttgggcttgccagcggcagcggcggccttcttcctcttgctggcgccgccg 653
           |||||||||||||||||||   ||   |||||||||||||| | ||| | |||| |||||
Sbjct: 201 ggcgggcgcttgggcttgc---cgctcgcggcggccttcttgcgctttccggcggcgccg 145

                                         
Query: 654 gcggccttgagcctgccctcgcccttcttg 683
            | |||  ||||||||||||| ||||||||
Sbjct: 144 cccgcccggagcctgccctcgtccttcttg 115
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>emb|Y08298.1|ZMHMGC2 Z.mays mRNA for HMGc2 protein
          Length = 828

 Score =  127 bits (64), Expect = 5e-26
 Identities = 166/200 (83%)
 Strand = Plus / Minus

                                                                       
Query: 414 gtcttctcatagtcctgcttcttctgtccagccttctccacataaggtgctttgtcctca 473
           |||||||||||||||||||||||||| ||||| |  |||||||| |||   || || |  
Sbjct: 293 gtcttctcatagtcctgcttcttctgcccagcttggtccacatagggttgcttctcttgc 234

                                                                       
Query: 474 tcagacatagatctccacttctcacctgcagccttgctcacgttggcgacattcttgttg 533
           || |||||||| | |||||| || ||||| ||||||||||||   || ||  ||||||||
Sbjct: 233 tctgacatagagcgccacttttcccctgctgccttgctcacggccgcaacgctcttgttg 174

                                                                       
Query: 534 ttggggttctccgcgttgtactgctgcctgaagtcagacatgaagacgaagaaggcggag 593
              |||| || ||| | ||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 173 ccagggtgctgcgcctggtactcctgcctgaattcagacatgaagacgaagaaggcggag 114

                               
Query: 594 ggcgggcgcttgggcttgcc 613
           || |||||||||||||||||
Sbjct: 113 ggagggcgcttgggcttgcc 94
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>gb|BT016444.1| Zea mays clone Contig277 mRNA sequence
          Length = 1158

 Score =  103 bits (52), Expect = 7e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                       
Query: 526 tcttgttgttggggttctccgcgttgtactgctgcctgaagtcagacatgaagacgaaga 585
           |||||||| | |||| || ||| | ||||| ||||||||| |||||||||||||||||||
Sbjct: 166 tcttgttgctagggtgctgcgcctggtactcctgcctgaattcagacatgaagacgaaga 107

                                       
Query: 586 aggcggagggcgggcgcttgggcttgcc 613
           |||||||||| |||||||||||||||||
Sbjct: 106 aggcggagggagggcgcttgggcttgcc 79



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 414 gtcttctcatagtcctgcttcttctgtccagccttctccacataaggtgctttgtcctca 473
           |||||||||||||||||||||||||| ||||| |  |||||||| |||   || || |  
Sbjct: 366 gtcttctcatagtcctgcttcttctgcccagcttggtccacatagggttgcttctcttgc 307

                                                    
Query: 474 tcagacatagatctccacttctcacctgcagccttgctcac 514
           || |||||||| | |||||| || ||||| |||||||||||
Sbjct: 306 tctgacatagagcgccacttttcccctgctgccttgctcac 266
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 85/97 (87%), Gaps = 3/97 (3%)
 Strand = Plus / Minus

                                                                            
Query: 571      acatgaagacgaagaaggcggagggcgggcgcttgggcttgccagcggcagcggcggcct 630
                |||||||||||||||| || || ||||||||||| ||||||||   |  |||||||||||
Sbjct: 27244159 acatgaagacgaagaaagcagacggcgggcgcttcggcttgcc---gctagcggcggcct 27244103

                                                     
Query: 631      tcttcctcttgctggcgccgccggcggccttgagcct 667
                |||||| ||| | ||||||||||||||||||||||||
Sbjct: 27244102 tcttccgcttcccggcgccgccggcggccttgagcct 27244066



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 399      tcgaagctggctttggtcttctcatagtcctgcttcttctgtccagccttctccacataa 458
                |||||| |||| ||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 27244848 tcgaagttggccttggtcttctcgtagtcctgcttcttttggccagccttgtccacataa 27244789

                     
Query: 459      ggtgc 463
                |||||
Sbjct: 27244788 ggtgc 27244784



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 474      tcagacatagatctccacttctcacctgcagccttgctcac 514
                |||||||||| || ||||||||| |||||||||||||||||
Sbjct: 27244481 tcagacatagctcgccacttctcccctgcagccttgctcac 27244441



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 267      ggatacactatttactcatcgtcgtcttcattatcct 303
                ||||||||||||||||| || ||||| ||||| ||||
Sbjct: 27245184 ggatacactatttactcttcatcgtcctcattttcct 27245148



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 15       tagattagcgaatgaaaacaagttcttacacaagtggttagcaa 58
                ||||||||| |||||||  |||||||   |||||||||||||||
Sbjct: 27245427 tagattagcaaatgaaacaaagttctgtgacaagtggttagcaa 27245384



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 644     ggcgccgccggcggccttga 663
               ||||||||||||||||||||
Sbjct: 4135370 ggcgccgccggcggccttga 4135351
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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1725_H08
          Length = 155431

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 85/97 (87%), Gaps = 3/97 (3%)
 Strand = Plus / Minus

                                                                          
Query: 571    acatgaagacgaagaaggcggagggcgggcgcttgggcttgccagcggcagcggcggcct 630
              |||||||||||||||| || || ||||||||||| ||||||||   |  |||||||||||
Sbjct: 140608 acatgaagacgaagaaagcagacggcgggcgcttcggcttgcc---gctagcggcggcct 140552

                                                   
Query: 631    tcttcctcttgctggcgccgccggcggccttgagcct 667
              |||||| ||| | ||||||||||||||||||||||||
Sbjct: 140551 tcttccgcttcccggcgccgccggcggccttgagcct 140515



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                          
Query: 399    tcgaagctggctttggtcttctcatagtcctgcttcttctgtccagccttctccacataa 458
              |||||| |||| ||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 141297 tcgaagttggccttggtcttctcgtagtcctgcttcttttggccagccttgtccacataa 141238

                   
Query: 459    ggtgc 463
              |||||
Sbjct: 141237 ggtgc 141233



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                       
Query: 474    tcagacatagatctccacttctcacctgcagccttgctcac 514
              |||||||||| || ||||||||| |||||||||||||||||
Sbjct: 140930 tcagacatagctcgccacttctcccctgcagccttgctcac 140890



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 267    ggatacactatttactcatcgtcgtcttcattatcct 303
              ||||||||||||||||| || ||||| ||||| ||||
Sbjct: 141633 ggatacactatttactcttcatcgtcctcattttcct 141597



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 15     tagattagcgaatgaaaacaagttcttacacaagtggttagcaa 58
              ||||||||| |||||||  |||||||   |||||||||||||||
Sbjct: 141876 tagattagcaaatgaaacaaagttctgtgacaagtggttagcaa 141833
to top
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 85/97 (87%), Gaps = 3/97 (3%)
 Strand = Plus / Minus

                                                                         
Query: 571   acatgaagacgaagaaggcggagggcgggcgcttgggcttgccagcggcagcggcggcct 630
             |||||||||||||||| || || ||||||||||| ||||||||   |  |||||||||||
Sbjct: 94830 acatgaagacgaagaaagcagacggcgggcgcttcggcttgcc---gctagcggcggcct 94774

                                                  
Query: 631   tcttcctcttgctggcgccgccggcggccttgagcct 667
             |||||| ||| | ||||||||||||||||||||||||
Sbjct: 94773 tcttccgcttcccggcgccgccggcggccttgagcct 94737



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 399   tcgaagctggctttggtcttctcatagtcctgcttcttctgtccagccttctccacataa 458
             |||||| |||| ||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 95519 tcgaagttggccttggtcttctcgtagtcctgcttcttttggccagccttgtccacataa 95460

                  
Query: 459   ggtgc 463
             |||||
Sbjct: 95459 ggtgc 95455



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 474   tcagacatagatctccacttctcacctgcagccttgctcac 514
             |||||||||| || ||||||||| |||||||||||||||||
Sbjct: 95152 tcagacatagctcgccacttctcccctgcagccttgctcac 95112



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 267   ggatacactatttactcatcgtcgtcttcattatcct 303
             ||||||||||||||||| || ||||| ||||| ||||
Sbjct: 95855 ggatacactatttactcttcatcgtcctcattttcct 95819



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 15    tagattagcgaatgaaaacaagttcttacacaagtggttagcaa 58
             ||||||||| |||||||  |||||||   |||||||||||||||
Sbjct: 96098 tagattagcaaatgaaacaaagttctgtgacaagtggttagcaa 96055
to top
>emb|AJ131374.1|ZMA131374 Zea mays hmgc1 gene, exons 1-7
          Length = 2929

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                       
Query: 571  acatgaagacgaagaaggcggagggcgggcgcttgggcttgcc 613
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 acatgaagacgaagaaggcggagggcgggcgcttgggcttgcc 1381



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 414  gtcttctcatagtcctgcttcttctgtccagc 445
            ||||||||||||||||||||||||||||||||
Sbjct: 2102 gtcttctcatagtcctgcttcttctgtccagc 2071



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/43 (88%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 249  atttgctacctcgtg--cttggatacactatttactcatcgtc 289
            |||||||||||||||  |||||| ||| | |||||||||||||
Sbjct: 2455 atttgctacctcgtgaccttggagacagtgtttactcatcgtc 2413
to top
>gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106
           (nfd106) mRNA, complete cds
          Length = 625

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 572 catgaagacgaagaaggcggagggcgggcgcttgggcttg 611
           |||||||| ||||||||||| ||||| ||||||| |||||
Sbjct: 153 catgaagaggaagaaggcggtgggcgagcgcttgcgcttg 114
to top
>emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group protein (HMGW)
          Length = 923

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 572 catgaagacgaagaaggcggagggcgggcgcttgggcttg 611
           ||||||||||||||||||||| ||||  | ||||||||||
Sbjct: 235 catgaagacgaagaaggcggatggcgccctcttgggcttg 196
to top
>emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I21,
              complete sequence
          Length = 127162

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                              
Query: 620    agcggcggccttcttcctcttgctggcgccgccggcggccttgagcct 667
              |||||| |||||||||| ||| || | ||||||||| |||||||||||
Sbjct: 103931 agcggcagccttcttccgcttcctagagccgccggcagccttgagcct 103884
to top
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
              complete sequence
          Length = 150305

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 620    agcggcggccttcttcctcttgctggcgccgccggcggccttgagcct 667
              |||||| |||||||||| ||| || | ||||||||| |||||||||||
Sbjct: 141279 agcggcagccttcttccgcttcctagagccgccggcagccttgagcct 141326
to top
>gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly
           factor D (nfd106) mRNA, complete cds
          Length = 655

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 572 catgaagacgaagaaggcggagggcgggcgcttgggcttg 611
           |||||||| ||||||||||| ||||| ||||||| |||||
Sbjct: 155 catgaagaggaagaaggcggtgggcgagcgcttgcgcttg 116
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 620     agcggcggccttcttcctcttgctggcgccgccggcggccttgagcct 667
               |||||| |||||||||| ||| || | ||||||||| |||||||||||
Sbjct: 4513547 agcggcagccttcttccgcttcctagagccgccggcagccttgagcct 4513594
to top
>gb|AY108096.1| Zea mays PCO136722 mRNA sequence
          Length = 882

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 572 catgaagacgaagaaggcggagggcgggcgcttgggcttg 611
           |||||||| ||||||||||| ||||| ||||||| |||||
Sbjct: 369 catgaagaggaagaaggcggtgggcgagcgcttgcgcttg 330
to top
>emb|AJ006708.1|ZMA6708 Zea mays HMGe gene
          Length = 684

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 468 tcctcatcagacatagatctccacttctcacctgcagccttgctcac 514
           |||||||| |||||||| | ||||||||| || || |||||||||||
Sbjct: 252 tcctcatccgacatagagcgccacttctccccagccgccttgctcac 206
to top
>gb|AY105190.1| Zea mays PCO097256 mRNA sequence
          Length = 879

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 468 tcctcatcagacatagatctccacttctcacctgcagccttgctcac 514
           |||||||| |||||||| | ||||||||| || || |||||||||||
Sbjct: 323 tcctcatccgacatagagcgccacttctccccagccgccttgctcac 277
to top
>ref|XM_460929.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14135g)
           partial mRNA
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 282 tcatcgtcgtcttcattatcctcatc 307
           ||||||||||||||||||| ||||||
Sbjct: 167 tcatcgtcgtcttcattattctcatc 142
to top
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
               hansenii
          Length = 2336804

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 282     tcatcgtcgtcttcattatcctcatc 307
               ||||||||||||||||||| ||||||
Sbjct: 1131943 tcatcgtcgtcttcattattctcatc 1131918
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>dbj|AP002832.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-651F18, complete
             sequence
          Length = 117898

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 238   cccaactcccaatttgctacct 259
             ||||||||||||||||||||||
Sbjct: 29673 cccaactcccaatttgctacct 29694
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>emb|AL844845.7| Mouse DNA sequence from clone RP23-155C1 on chromosome 2, complete
             sequence
          Length = 112100

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 601   gcttgggcttgccagcggcagc 622
             ||||||||||||||||||||||
Sbjct: 41244 gcttgggcttgccagcggcagc 41265
to top
>gb|AC140351.2| Mus musculus BAC clone RP24-258E8 from chromosome 8, complete sequence
          Length = 167073

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 634    tcctcttgctggcgccgccggcggc 658
              |||||||||||| ||||||||||||
Sbjct: 106912 tcctcttgctggagccgccggcggc 106888
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>gb|BC010197.1| Mus musculus carboxypeptidase E, mRNA (cDNA clone MGC:7101
           IMAGE:3157558), complete cds
          Length = 2130

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 231 tcctcttgctggagccgccggcggc 207
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>gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome 15, complete sequence
          Length = 209081

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   tttggtcttctcatagtcctg 430
             |||||||||||||||||||||
Sbjct: 52318 tttggtcttctcatagtcctg 52298
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>ref|XM_976304.1| PREDICTED: Mus musculus carboxypeptidase E (Cpe), mRNA
          Length = 1306

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 300 tcctcttgctggagccgccggcggc 276
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>gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, complete sequence
          Length = 200339

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   tttggtcttctcatagtcctg 430
             |||||||||||||||||||||
Sbjct: 95345 tttggtcttctcatagtcctg 95325
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>ref|NM_013494.2| Mus musculus carboxypeptidase E (Cpe), mRNA
          Length = 2130

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 231 tcctcttgctggagccgccggcggc 207
to top
>emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 92472

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 587   ggcggagggcgggcgcttgggcttg 611
             ||||| |||||||||||||||||||
Sbjct: 70999 ggcggggggcgggcgcttgggcttg 71023
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 643   tggcgccgccggcggccttga 663
             |||||||||||||||||||||
Sbjct: 89732 tggcgccgccggcggccttga 89712
to top
>emb|X61232.1|MMCBXPEPH Mouse mRNA for carboxypeptidase H
          Length = 1992

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 179 tcctcttgctggagccgccggcggc 155
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 346     cctcctcatcatcctgagtct 366
               |||||||||||||||||||||
Sbjct: 2969609 cctcctcatcatcctgagtct 2969629
to top
>dbj|AK160097.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420048N13 product:carboxypeptidase E,
           full insert sequence
          Length = 2101

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 246 tcctcttgctggagccgccggcggc 222
to top
>dbj|AK047891.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130020F14 product:carboxypeptidase E,
           full insert sequence
          Length = 2078

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 222 tcctcttgctggagccgccggcggc 198
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 618      gcagcggcggccttcttcctc 638
                |||||||||||||||||||||
Sbjct: 23173917 gcagcggcggccttcttcctc 23173937
to top
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete
             cds; ASR2 (Asr2) gene, complete cds, alternatively
             spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN
             (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2
             (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2
             (Tfr2) gene, partial cds
          Length = 296820

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 484   atctccacttctcacctgcag 504
             |||||||||||||||||||||
Sbjct: 32836 atctccacttctcacctgcag 32856
to top
>emb|AL592214.14| Mouse DNA sequence from clone RP23-212I24 on chromosome 1, complete
              sequence
          Length = 194720

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 353    atcatcctgagtcttggccttcttg 377
              ||||||||||||||||| |||||||
Sbjct: 187116 atcatcctgagtcttggtcttcttg 187140
to top
>gb|AC005104.1| Homo sapiens BAC clone CTA-442F18 from 2, complete sequence
          Length = 134911

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 658   ccttgagcctgccctcgcccttctt 682
             ||||||||||||||||| |||||||
Sbjct: 67730 ccttgagcctgccctcggccttctt 67754
to top
>gb|AC152168.2| Mus musculus BAC clone RP23-96H18 from chromosome 8, complete sequence
          Length = 219434

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 634   tcctcttgctggcgccgccggcggc 658
             |||||||||||| ||||||||||||
Sbjct: 85086 tcctcttgctggagccgccggcggc 85062
to top
>dbj|AK209525.1| Mus musculus cDNA, clone:Y2G0115G07, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000048967, based on BLAT search
          Length = 185

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 87  tcctcttgctggagccgccggcggc 63
to top
>emb|AJ337604.1|HSA337604 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-LA18C
          Length = 685

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 587 ggcggagggcgggcgcttgggcttg 611
           ||||| |||||||||||||||||||
Sbjct: 145 ggcggggggcgggcgcttgggcttg 121
to top
>emb|AJ337239.1|HSA337239 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-RL11R
          Length = 757

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 587 ggcggagggcgggcgcttgggcttg 611
           ||||| |||||||||||||||||||
Sbjct: 145 ggcggggggcgggcgcttgggcttg 121
to top
>emb|AJ337191.1|HSA337191 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DJ9R
          Length = 730

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 587 ggcggagggcgggcgcttgggcttg 611
           ||||| |||||||||||||||||||
Sbjct: 145 ggcggggggcgggcgcttgggcttg 121
to top
>emb|AJ337085.1|HSA337085 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BN3R
          Length = 720

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 587 ggcggagggcgggcgcttgggcttg 611
           ||||| |||||||||||||||||||
Sbjct: 145 ggcggggggcgggcgcttgggcttg 121
to top
>gb|U23184.1|MMU23184 Mus musculus musculus carboxypeptidase E (Cpe) mRNA, complete cds
          Length = 1547

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 634 tcctcttgctggcgccgccggcggc 658
           |||||||||||| ||||||||||||
Sbjct: 140 tcctcttgctggagccgccggcggc 116
to top
>gb|AF095748.1|AF095748 Burkholderia cepacia principal sigma factor (sigA), phthalate
             dioxygenase reductase (ophA1), putative phthalate permease
             N-terminal region, putative phathalate permease C-terminal
             region (ophD), 4,5-dihydroxyphthalate decarboxylase
             (ophC), phthalate-inducible quinolinate phosphoribosyl
             transferase (ophE), transposase (tnp), phthalate
             dihydrodiol dehydrogenase (ophB), and phthalate
             dioxygenase (ophA2) genes, complete cds; and unknown gene
          Length = 13610

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 650   gccggcggccttgagcctgccctcg 674
             ||||||||||||||||||| |||||
Sbjct: 10478 gccggcggccttgagcctggcctcg 10502
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 618      gcagcggcggccttcttcctc 638
                |||||||||||||||||||||
Sbjct: 23102108 gcagcggcggccttcttcctc 23102128
to top
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 135323

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 618  gcagcggcggccttcttcctc 638
            |||||||||||||||||||||
Sbjct: 4480 gcagcggcggccttcttcctc 4460
to top
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence
          Length = 164951

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 484   atctccacttctcacctgcag 504
             |||||||||||||||||||||
Sbjct: 41489 atctccacttctcacctgcag 41509
to top
>emb|AJ343462.1|HSA343462 Homo sapiens genomic sequence surrounding NotI site, clone NR1-CG4R
          Length = 741

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 587 ggcggagggcgggcgcttgggcttg 611
           ||||| |||||||||||||||||||
Sbjct: 145 ggcggggggcgggcgcttgggcttg 121
to top
>ref|XM_637534.1| Dictyostelium discoideum hypothetical protein (DDB0169229), partial
           mRNA
          Length = 2085

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 524 attcttgttgttggggttct 543
           ||||||||||||||||||||
Sbjct: 283 attcttgttgttggggttct 264
to top
>ref|XM_468609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 694

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 644 ggcgccgccggcggccttga 663
           ||||||||||||||||||||
Sbjct: 453 ggcgccgccggcggccttga 434
to top
>ref|XM_479144.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 441

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 644 ggcgccgccggcggccttga 663
           ||||||||||||||||||||
Sbjct: 423 ggcgccgccggcggccttga 404
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>ref|XM_365427.1| Magnaporthe grisea 70-15 hypothetical protein (MG02129.4) partial
            mRNA
          Length = 2598

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  atcgtcgtcttcattatcctcatc 307
            |||||||||||||| |||||||||
Sbjct: 1293 atcgtcgtcttcatcatcctcatc 1270
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>ref|XM_677334.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9157.2), mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 615 gcggcagcggcggccttctt 634
           ||||||||||||||||||||
Sbjct: 125 gcggcagcggcggccttctt 106
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 644      ggcgccgccggcggccttga 663
                ||||||||||||||||||||
Sbjct: 16599922 ggcgccgccggcggccttga 16599903
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>gb|AC159708.13| Mus musculus 10 BAC RP23-110M21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 238622

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   acttctcacctgcagccttg 509
             ||||||||||||||||||||
Sbjct: 65984 acttctcacctgcagccttg 65965
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>gb|AY282923.1| Strongylocentrotus purpuratus polycystic kidney disease protein 2
            (PKD2) mRNA, complete cds
          Length = 3539

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 281  ctcatcgtcgtcttcattatcctcatcg 308
            |||||||||||| |||| ||||||||||
Sbjct: 2495 ctcatcgtcgtcatcatcatcctcatcg 2468
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>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4,
             complete sequence
          Length = 183648

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   attcttgttgttggggttct 543
             ||||||||||||||||||||
Sbjct: 94231 attcttgttgttggggttct 94212
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>ref|XR_003508.1| PREDICTED: Mus musculus similar to Alpha-enolase
            (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase)
            (NNE) (Enolase 1) (LOC637620), mRNA
          Length = 1184

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 490  acttctcacctgcagccttg 509
            ||||||||||||||||||||
Sbjct: 1116 acttctcacctgcagccttg 1097
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>ref|XR_001977.1| PREDICTED: Mus musculus similar to Alpha-enolase
            (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase)
            (NNE) (Enolase 1) (LOC637620), mRNA
          Length = 1184

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 490  acttctcacctgcagccttg 509
            ||||||||||||||||||||
Sbjct: 1116 acttctcacctgcagccttg 1097
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>gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 map q34, complete
           sequence
          Length = 142440

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 490 acttctcacctgcagccttg 509
           ||||||||||||||||||||
Sbjct: 525 acttctcacctgcagccttg 544
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>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 238254

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 564    aagtcagacatgaagacgaa 583
              ||||||||||||||||||||
Sbjct: 195576 aagtcagacatgaagacgaa 195595
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>ref|XM_751756.1| Ustilago maydis 521 hypothetical protein (UM00702.1) partial mRNA
          Length = 5868

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 282  tcatcgtcgtcttcattatcctcatcgc 309
            |||||||||||||||| ||| |||||||
Sbjct: 1544 tcatcgtcgtcttcatcatcatcatcgc 1517
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>gb|AC115117.5| Mus musculus BAC clone RP23-76J12 from chromosome 18, complete sequence
          Length = 197626

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gcaacttctcaaaccatgag 127
              ||||||||||||||||||||
Sbjct: 122483 gcaacttctcaaaccatgag 122502
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>emb|AJ890015.1| Triticum aestivum partial mRNA for putative high mobility group
           protein (hmg1 gene), cultivar Wyuna, from endosperm
           tissue
          Length = 638

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 gtcttggccttcttggagct 382
           ||||||||||||||||||||
Sbjct: 296 gtcttggccttcttggagct 277
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>gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199841

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   acttctcacctgcagccttg 509
             ||||||||||||||||||||
Sbjct: 72957 acttctcacctgcagccttg 72976
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 641     gctggcgccgccggcggccttgag 664
               |||| |||||||||||||||||||
Sbjct: 3406098 gctgacgccgccggcggccttgag 3406121
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>gb|U70480.1|LEU70480 Lycopersicon esculentum abscission polygalacturonase (TAPG2) mRNA
           complete cds
          Length = 1277

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 524 attcttgttgttggggttct 543
           ||||||||||||||||||||
Sbjct: 478 attcttgttgttggggttct 459
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>ref|XM_785429.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2839-PA
           (LOC585610), mRNA
          Length = 3282

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 tcgtcttcattatcctcatc 307
           ||||||||||||||||||||
Sbjct: 827 tcgtcttcattatcctcatc 808
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>emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein
          Length = 974

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 572 catgaagacgaagaaggcggagggcgggcgcttgggcttg 611
           |||||||||||||||||||  |||||  | ||||||||||
Sbjct: 247 catgaagacgaagaaggcgctgggcgccctcttgggcttg 208
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>ref|XM_781060.1| PREDICTED: Strongylocentrotus purpuratus similar to neuralized,
           possibly N-myristoylated (XR998) (LOC581036), mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctcatcgtcgtcttcattat 300
           ||||||||||||||||||||
Sbjct: 654 ctcatcgtcgtcttcattat 673
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 516   ttggcgacattcttgttgtt 535
             ||||||||||||||||||||
Sbjct: 62426 ttggcgacattcttgttgtt 62407
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>gb|AY082396.1| Zea mays knotted1-interacting protein (kip) mRNA, complete cds
          Length = 1401

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  gcctcctcatcatcctgagtcttg 368
            ||||||||||| ||||||||||||
Sbjct: 1193 gcctcctcatcctcctgagtcttg 1216
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    gcggcagcggcggccttctt 634
              ||||||||||||||||||||
Sbjct: 517825 gcggcagcggcggccttctt 517806
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>ref|NM_135461.2| Drosophila melanogaster CG4364-RA (CG4364), mRNA
          Length = 2123

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  tcatcgtcgtcttcattatc 301
            ||||||||||||||||||||
Sbjct: 1676 tcatcgtcgtcttcattatc 1657
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>gb|AY069545.1| Drosophila melanogaster LD27336 full length cDNA
          Length = 2141

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  tcatcgtcgtcttcattatc 301
            ||||||||||||||||||||
Sbjct: 1676 tcatcgtcgtcttcattatc 1657
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>gb|AC182755.1| Gasterosteus aculeatus clone VMRC28-49K03, complete sequence
          Length = 136793

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    agatagcaggatagcaaact 220
              ||||||||||||||||||||
Sbjct: 118683 agatagcaggatagcaaact 118664
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>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete
             sequence
          Length = 133843

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 644   ggcgccgccggcggccttga 663
             ||||||||||||||||||||
Sbjct: 54121 ggcgccgccggcggccttga 54140
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>gb|AC018608.9|AC018608 Homo sapiens chromosome 8, clone RP11-403P13, complete sequence
          Length = 200863

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 283   catcgtcgtcttcattatcctcat 306
             ||||||| ||||||||||||||||
Sbjct: 85923 catcgtcatcttcattatcctcat 85946
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 644      ggcgccgccggcggccttga 663
                ||||||||||||||||||||
Sbjct: 25183393 ggcgccgccggcggccttga 25183412
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 644      ggcgccgccggcggccttga 663
                ||||||||||||||||||||
Sbjct: 16593555 ggcgccgccggcggccttga 16593536
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 280      actcatcgtcgtcttcattatcctcatc 307
                ||||||||||||| |||| |||||||||
Sbjct: 26739413 actcatcgtcgtcgtcatcatcctcatc 26739440
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>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05,
              complete sequence
          Length = 176075

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    tcatcgtcgtcttcattatc 301
              ||||||||||||||||||||
Sbjct: 110897 tcatcgtcgtcttcattatc 110878
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>gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, complete sequence
          Length = 145009

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   ttgtactgctgcctgaagtc 568
             ||||||||||||||||||||
Sbjct: 29084 ttgtactgctgcctgaagtc 29065
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>ref|NM_214662.1| Strongylocentrotus purpuratus polycystic kidney disease protein 2
            (pkd2), mRNA
          Length = 3539

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 281  ctcatcgtcgtcttcattatcctcatcg 308
            |||||||||||| |||| ||||||||||
Sbjct: 2495 ctcatcgtcgtcatcatcatcctcatcg 2468
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>ref|XM_214456.3| PREDICTED: Rattus norvegicus similar to Alpha enolase
           (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase)
           (NNE) (Enolase 1) (LOC291065), mRNA
          Length = 938

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 490 acttctcacctgcagccttg 509
           ||||||||||||||||||||
Sbjct: 643 acttctcacctgcagccttg 624
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>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0694A04
          Length = 141476

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 280   actcatcgtcgtcttcattatcctcatc 307
             ||||||||||||| |||| |||||||||
Sbjct: 86505 actcatcgtcgtcgtcatcatcctcatc 86532
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 612     ccagcggcagcggcggcctt 631
               ||||||||||||||||||||
Sbjct: 6500782 ccagcggcagcggcggcctt 6500763
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>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_E05
          Length = 116305

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 644   ggcgccgccggcggccttga 663
             ||||||||||||||||||||
Sbjct: 45384 ggcgccgccggcggccttga 45365
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           PAC clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 644 ggcgccgccggcggccttga 663
           ||||||||||||||||||||
Sbjct: 64  ggcgccgccggcggccttga 83
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>dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G23, full
           insert sequence
          Length = 727

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 644 ggcgccgccggcggccttga 663
           ||||||||||||||||||||
Sbjct: 472 ggcgccgccggcggccttga 453
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>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1003_H02
          Length = 124043

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 644    ggcgccgccggcggccttga 663
              ||||||||||||||||||||
Sbjct: 103880 ggcgccgccggcggccttga 103899
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>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the
           complete sequence
          Length = 264919

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 tcatcgtcgtcttcattatc 301
           ||||||||||||||||||||
Sbjct: 506 tcatcgtcgtcttcattatc 525
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>gb|AC167686.2| Daphnia pulex clone JGIAZSN-5K3, complete sequence
          Length = 36132

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   tcttcgacctcagatttgga 337
             ||||||||||||||||||||
Sbjct: 12661 tcttcgacctcagatttgga 12642
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>gb|AF001001.1|AF001001 Lycopersicon esculentum polygalacturonase 2 (TAPG2) gene, complete
            cds
          Length = 7991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 524  attcttgttgttggggttct 543
            ||||||||||||||||||||
Sbjct: 2682 attcttgttgttggggttct 2663
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>emb|BX004791.6| Mouse DNA sequence from clone RP24-233L10 on chromosome 4, complete
             sequence
          Length = 123244

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gctctctctctgctaataca 100
             ||||||||||||||||||||
Sbjct: 78063 gctctctctctgctaataca 78082
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>emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobility group protein (clone
           pBAN EU134)
          Length = 784

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 572 catgaagacgaagaaggcggagggcgggcgcttgggcttg 611
           |||||||||||||||||||  ||| || | ||||||||||
Sbjct: 213 catgaagacgaagaaggcgctgggaggcctcttgggcttg 174


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,857,010
Number of Sequences: 3902068
Number of extensions: 7857010
Number of successful extensions: 175798
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 174600
Number of HSP's gapped (non-prelim): 1192
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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