ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12p24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X98124.1|HVJIP H.vulgare gene encoding jasmonate-induced pro... 143 9e-31
2emb|AL112356.1|CNS01A18 Botrytis cinerea strain T4 cDNA library 48 0.038
3gb|AC119801.14| Mus musculus, clone RP23-54N13, complete sequence 44 0.60
4gb|AC004779.1| Homo sapiens chromosome 16, cosmid clone 304A10 (... 42 2.4
5gb|AC005564.1| Homo sapiens chromosome 16, cosmid clone 420F6 (L... 42 2.4
6gb|AY679523.1| Homo sapiens cell division cycle 2-like 5 (cholin... 42 2.4
7gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence 42 2.4
8emb|AL356240.15| Human DNA sequence from clone RP5-873F21 on chr... 42 2.4
9emb|AL354712.18| Human DNA sequence from clone RP4-597A16 on chr... 42 2.4
10emb|AL133350.16| Human DNA sequence from clone RP11-155N8 on chr... 42 2.4
11gb|AC129803.3| Homo sapiens 3 BAC RP11-15N24 (Roswell Park Cance... 42 2.4
12gb|AC112212.2| Homo sapiens chromosome 3 clone RP11-185E15, comp... 42 2.4
13gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Ca... 42 2.4
14gb|AC099328.2| Homo sapiens chromosome 3 clone RP11-62G11, compl... 42 2.4
15gb|AC008771.4|AC008771 Homo sapiens chromosome 5 clone CTD-2015H... 42 2.4
16gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, co... 42 2.4
17gb|AC018764.8| Homo sapiens chromosome 5 clone CTD-2327L5, compl... 42 2.4
18gb|AC007151.2|AC007151 Homo sapiens clone RPCI-11_95J11, complet... 42 2.4
19gb|AC006023.2|AC006023 Homo sapiens PAC clone RP5-1147A1 from 7p... 42 2.4
20emb|AJ315157.1|HSA315157 Homo sapiens t(8;16)(p11;p13) chimeric ... 42 2.4
21gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, co... 40 9.4
22gb|AC122894.2| Mus musculus BAC clone RP23-69F3 from 1, complete... 40 9.4
23gb|AC073901.5| Homo sapiens BAC clone RP11-222O23 from 7, comple... 40 9.4
24emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chr... 40 9.4
25emb|AL691470.17| Mouse DNA sequence from clone RP23-160F12 on ch... 40 9.4
26ref|NM_166340.1| Drosophila melanogaster endophilin B CG9834-RB,... 40 9.4
27ref|NM_137566.2| Drosophila melanogaster endophilin B CG9834-RA,... 40 9.4
28gb|AY071608.1| Drosophila melanogaster RE65748 full length cDNA 40 9.4
29gb|AC008344.2|AC008344 Drosophila melanogaster, chromosome 2R, r... 40 9.4
30gb|AC008096.3|AC008096 Drosophila melanogaster, chromosome 2R, r... 40 9.4
31gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, co... 40 9.4
32emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in... 40 9.4
33emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-9... 40 9.4
34gb|AE003796.3| Drosophila melanogaster chromosome 2R, section 54... 40 9.4
35emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-4... 40 9.4
36gb|BT001605.1| Drosophila melanogaster RE31027 full insert cDNA 40 9.4
37gb|AC159815.3| Mus musculus BAC clone RP23-324H19 from chromosom... 40 9.4
38gb|AC155232.1| Mus musculus BAC clone RP24-374P12 from 12, compl... 40 9.4
39emb|AL663088.10| Mouse DNA sequence from clone RP23-293H17 on ch... 40 9.4
40emb|AJ437142.1|DME437142 Drosophila melanogaster mRNA for endoph... 40 9.4
41gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, c... 40 9.4 
>emb|X98124.1|HVJIP H.vulgare gene encoding jasmonate-induced protein
          Length = 2897

 Score =  143 bits (72), Expect = 9e-31
 Identities = 198/240 (82%)
 Strand = Plus / Minus

                                                                        
Query: 387  aaccagtcgcaggagctgctgctggacgggatcctgctacgatacacaacagcggcagtt 446
            ||||| |||||||| ||||||||||| |||||| || ||||||||||||| ||  ||| |
Sbjct: 2545 aaccaatcgcaggacctgctgctggaggggatcttggtacgatacacaacggcaccagct 2486

                                                                        
Query: 447  gaacctttcgcagctgctcttggtttgacgtggagaaatgccccccattgtccattctga 506
            |||||   ||||||  | ||||| | ||||||||| ||||| |||||||| |||||||||
Sbjct: 2485 gaaccaaccgcagcaccacttgggtggacgtggaggaatgcaccccattgcccattctga 2426

                                                                        
Query: 507  atatccgatgggtagggtgtatcaaagatactgccaatccaattcttgtacgtgacgaaa 566
            ||||| ||||||||||| |||||| |||||  |||   |||||  |||||| |  | || 
Sbjct: 2425 atatctgatgggtagggagtatcatagatatggccgtgccaatcgttgtacttagccaag 2366

                                                                        
Query: 567  ctcagattggtaccggtagcattgtagatgaggcattttacagatattccattaccgtac 626
            |||| | ||| ||| || ||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 2365 ctcaaagtggcaccagtggcattgtagatgaggcattttacagctattccgttaccgtac 2306
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>emb|AL112356.1|CNS01A18 Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 260 tgagtggagatttgaatttgccag 283
           ||||||||||||||||||||||||
Sbjct: 356 tgagtggagatttgaatttgccag 333
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>gb|AC119801.14| Mus musculus, clone RP23-54N13, complete sequence
          Length = 251756

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 289   cattgtagatataatcccagtgctta 314
             |||||||| |||||||||||||||||
Sbjct: 70840 cattgtagctataatcccagtgctta 70815
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>gb|AC004779.1| Homo sapiens chromosome 16, cosmid clone 304A10 (LANL), complete
             sequence
          Length = 35687

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   tataatcccagtgcttaggga 318
             |||||||||||||||||||||
Sbjct: 21322 tataatcccagtgcttaggga 21342
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>gb|AC005564.1| Homo sapiens chromosome 16, cosmid clone 420F6 (LANL), complete
             sequence
          Length = 37930

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   tataatcccagtgcttaggga 318
             |||||||||||||||||||||
Sbjct: 11608 tataatcccagtgcttaggga 11628
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>gb|AY679523.1| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell
              division controller) (CDC2L5) gene, complete cds
          Length = 148952

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    tataatcccagtgcttaggga 318
              |||||||||||||||||||||
Sbjct: 138827 tataatcccagtgcttaggga 138807
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>gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence
          Length = 154021

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 175   agggaagctggaaaactgcacgtgc 199
             ||||| |||||||||||||||||||
Sbjct: 31185 agggaggctggaaaactgcacgtgc 31209
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>emb|AL356240.15| Human DNA sequence from clone RP5-873F21 on chromosome 11 Contains part
             of a novel gene for brain protein 239, ESTs and GSSs,
             complete sequence
          Length = 114144

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 255   tcagttgagtggagatttgaatttg 279
             |||||||| ||||||||||||||||
Sbjct: 98307 tcagttgattggagatttgaatttg 98331
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>emb|AL354712.18| Human DNA sequence from clone RP4-597A16 on chromosome 1p36.13-36.23
              Contains the 5' end of a novel leucine rich repeat domain
              containing protein, a novel gene, a pseudogene similar to
              part of WD repeat domain, the 5' end of the gene for lung
              type-I cell membrane-associated glycoprotein (T1A-2) and a
              CpG island, complete sequence
          Length = 123288

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    tataatcccagtgcttaggga 318
              |||||||||||||||||||||
Sbjct: 114834 tataatcccagtgcttaggga 114814
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>emb|AL133350.16| Human DNA sequence from clone RP11-155N8 on chromosome 10 Contains
            GSSs and STSs, complete sequence
          Length = 89833

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 300  taatcccagtgcttagggaag 320
            |||||||||||||||||||||
Sbjct: 3655 taatcccagtgcttagggaag 3675
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>gb|AC129803.3| Homo sapiens 3 BAC RP11-15N24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185721

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    tataatcccagtgcttaggga 318
              |||||||||||||||||||||
Sbjct: 106775 tataatcccagtgcttaggga 106795
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>gb|AC112212.2| Homo sapiens chromosome 3 clone RP11-185E15, complete sequence
          Length = 168752

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    tataatcccagtgcttaggga 318
              |||||||||||||||||||||
Sbjct: 154625 tataatcccagtgcttaggga 154605
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>gb|AC078813.13| Homo sapiens 3q BAC RP11-149B11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 142000

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   tataatcccagtgcttaggga 318
             |||||||||||||||||||||
Sbjct: 83003 tataatcccagtgcttaggga 82983
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>gb|AC099328.2| Homo sapiens chromosome 3 clone RP11-62G11, complete sequence
          Length = 156066

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   tataatcccagtgcttaggga 318
             |||||||||||||||||||||
Sbjct: 58842 tataatcccagtgcttaggga 58822
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>gb|AC008771.4|AC008771 Homo sapiens chromosome 5 clone CTD-2015H6, complete sequence
          Length = 123169

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 300   taatcccagtgcttagggaag 320
             |||||||||||||||||||||
Sbjct: 77283 taatcccagtgcttagggaag 77263
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>gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, complete sequence
          Length = 193386

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   ccactccctgcagctagcaat 164
             |||||||||||||||||||||
Sbjct: 78559 ccactccctgcagctagcaat 78539
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>gb|AC018764.8| Homo sapiens chromosome 5 clone CTD-2327L5, complete sequence
          Length = 126052

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 300    taatcccagtgcttagggaag 320
              |||||||||||||||||||||
Sbjct: 104277 taatcccagtgcttagggaag 104297
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>gb|AC007151.2|AC007151 Homo sapiens clone RPCI-11_95J11, complete sequence
          Length = 165196

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   tataatcccagtgcttaggga 318
             |||||||||||||||||||||
Sbjct: 65963 tataatcccagtgcttaggga 65943
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>gb|AC006023.2|AC006023 Homo sapiens PAC clone RP5-1147A1 from 7p14-p12, complete sequence
          Length = 157385

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   tataatcccagtgcttaggga 318
             |||||||||||||||||||||
Sbjct: 53346 tataatcccagtgcttaggga 53326
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>emb|AJ315157.1|HSA315157 Homo sapiens t(8;16)(p11;p13) chimeric CBP/MOZ genomic DNA from
           acute myeloid leukemia patient (case 4)
          Length = 419

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 tataatcccagtgcttaggga 318
           |||||||||||||||||||||
Sbjct: 44  tataatcccagtgcttaggga 64
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>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence
          Length = 173589

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     atctccttcctctattattc 77
              ||||||||||||||||||||
Sbjct: 161622 atctccttcctctattattc 161641
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>gb|AC122894.2| Mus musculus BAC clone RP23-69F3 from 1, complete sequence
          Length = 205318

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     atctccttcctctattattc 77
              ||||||||||||||||||||
Sbjct: 131999 atctccttcctctattattc 131980
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>gb|AC073901.5| Homo sapiens BAC clone RP11-222O23 from 7, complete sequence
          Length = 170654

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 300    taatcccagtgcttagggaagtgt 323
              |||||||||||||| |||||||||
Sbjct: 129036 taatcccagtgctttgggaagtgt 129013
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>emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chromosome 13 Contains the
             gene for zinc finger protein of the cerebellum 5 (ZIC5),
             the ZIC2 gene for Zic family member 2 (odd-paired homolog
             Drosophila), a 13kDa differentiation-associated protein
             (DAP13) pseudogene, an asparagine synthetase (ASNS)
             pseudogene, the 5' end of the PCCA gene for propionyl
             Coenzyme A carboxylase alpha polypeptide and seven CpG
             islands, complete sequence
          Length = 153762

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   atataatcccagtgcttagggaag 320
             ||||||||||||||||| ||||||
Sbjct: 90136 atataatcccagtgctttgggaag 90159
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>emb|AL691470.17| Mouse DNA sequence from clone RP23-160F12 on chromosome 11 Contains the
              3' end of gene FLJ13305, a novel gene, a novel gene
              (1700061J23Rik) and a CpG island, complete sequence
          Length = 195614

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    tataatcccagtgcttaggg 317
              ||||||||||||||||||||
Sbjct: 108099 tataatcccagtgcttaggg 108118
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>ref|NM_166340.1| Drosophila melanogaster endophilin B CG9834-RB, transcript variant
           B (endoB), mRNA
          Length = 2224

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agctgctgctggacgggatc 419
           ||||||||||||||||||||
Sbjct: 775 agctgctgctggacgggatc 794
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>ref|NM_137566.2| Drosophila melanogaster endophilin B CG9834-RA, transcript variant
           A (endoB), mRNA
          Length = 2260

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agctgctgctggacgggatc 419
           ||||||||||||||||||||
Sbjct: 811 agctgctgctggacgggatc 830
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>gb|AY071608.1| Drosophila melanogaster RE65748 full length cDNA
          Length = 2269

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agctgctgctggacgggatc 419
           ||||||||||||||||||||
Sbjct: 811 agctgctgctggacgggatc 830
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>gb|AC008344.2|AC008344 Drosophila melanogaster, chromosome 2R, region 56C-56D, BAC clone
              BACR19I21, complete sequence
          Length = 171981

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    agctgctgctggacgggatc 419
              ||||||||||||||||||||
Sbjct: 120643 agctgctgctggacgggatc 120624
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>gb|AC008096.3|AC008096 Drosophila melanogaster, chromosome 2R, region 56C-56D, BAC clone
              BACR21D20, complete sequence
          Length = 176813

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    agctgctgctggacgggatc 419
              ||||||||||||||||||||
Sbjct: 135962 agctgctgctggacgggatc 135981
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>gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, complete sequence
          Length = 195558

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 298   tataatcccagtgcttagggaagt 321
             |||||||||||||||| |||||||
Sbjct: 67044 tataatcccagtgctttgggaagt 67067
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>emb|AL953855.9| Zebrafish DNA sequence from clone CH211-239F4 in linkage group 1,
             complete sequence
          Length = 146080

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   tgtagatgaggcattttaca 608
             ||||||||||||||||||||
Sbjct: 15124 tgtagatgaggcattttaca 15143
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>emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-908D14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169496

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 298   tataatcccagtgcttagggaagt 321
             |||||||||||||||| |||||||
Sbjct: 62229 tataatcccagtgctttgggaagt 62206
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>gb|AE003796.3| Drosophila melanogaster chromosome 2R, section 54 of 73 of the complete
              sequence
          Length = 277421

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 400    agctgctgctggacgggatc 419
              ||||||||||||||||||||
Sbjct: 131096 agctgctgctggacgggatc 131077
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>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174442

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 298   tataatcccagtgcttagggaagt 321
             |||||||||||||||| |||||||
Sbjct: 19952 tataatcccagtgctttgggaagt 19975
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>gb|BT001605.1| Drosophila melanogaster RE31027 full insert cDNA
          Length = 2191

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agctgctgctggacgggatc 419
           ||||||||||||||||||||
Sbjct: 733 agctgctgctggacgggatc 752
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>gb|AC159815.3| Mus musculus BAC clone RP23-324H19 from chromosome 12, complete sequence
          Length = 213030

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    tataatcccagtgcttaggg 317
              ||||||||||||||||||||
Sbjct: 177842 tataatcccagtgcttaggg 177861
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>gb|AC155232.1| Mus musculus BAC clone RP24-374P12 from 12, complete sequence
          Length = 139740

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tataatcccagtgcttaggg 317
              ||||||||||||||||||||
Sbjct: 115804 tataatcccagtgcttaggg 115785
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>emb|AL663088.10| Mouse DNA sequence from clone RP23-293H17 on chromosome 11, complete
             sequence
          Length = 243290

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   atataatcccagtgcttagg 316
             ||||||||||||||||||||
Sbjct: 26890 atataatcccagtgcttagg 26871
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>emb|AJ437142.1|DME437142 Drosophila melanogaster mRNA for endophilin B (CG9834 gene)
          Length = 1319

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 400 agctgctgctggacgggatc 419
           ||||||||||||||||||||
Sbjct: 704 agctgctgctggacgggatc 723
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>gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, complete sequence
          Length = 216789

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    ataatcccagtgcttagggaagtg 322
              ||||||||||||||| ||||||||
Sbjct: 126100 ataatcccagtgctttgggaagtg 126077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,850,824
Number of Sequences: 3902068
Number of extensions: 4850824
Number of successful extensions: 93471
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93392
Number of HSP's gapped (non-prelim): 78
length of query: 686
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 663
effective length of database: 17,143,297,704
effective search space: 11366006377752
effective search space used: 11366006377752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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