ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13e11 |
|---|---|
| Clone Library Name | barley_pub |
>ILL4_ARATH (O04373) IAA-amino acid hydrolase ILR1-like 4 precursor (EC| 3.5.1.-) Length = 440 Score = 114 bits (285), Expect = 3e-25 Identities = 57/111 (51%), Positives = 74/111 (66%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 PPT+N+ LH FF V +M+G E QPLMG+EDFSFY + +P ++ FVGM N+ R Sbjct: 332 PPTVNDKALHQFFKNVSGDMLGIENYVEMQPLMGSEDFSFYQQAIPG-HFSFVGMQNKAR 390 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYLLEHQLVTAAKVVEPRDEL 351 P A HSPYF +NE+ LPYGA++ AS+A RYLLE + T K +DEL Sbjct: 391 SPMASPHSPYFEVNEELLPYGASLHASMATRYLLELKASTLNK-SNKKDEL 440
>ILL5_ARATH (Q9SWX9) IAA-amino acid hydrolase ILR1-like 5 precursor (EC| 3.5.1.-) Length = 435 Score = 98.2 bits (243), Expect = 2e-20 Identities = 46/95 (48%), Positives = 65/95 (68%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 PPT+NN LH F+ V +M+G E P+M +EDF+FY + +P ++ FVGM N++ Sbjct: 332 PPTVNNKTLHLFYKNVSVDMLGIENYVETLPVMVSEDFAFYQQAIPG-HFSFVGMQNKSH 390 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYLLE 399 P A HSP+F +NE+ LPYGA++ ASLA RYLL+ Sbjct: 391 SPMANPHSPFFEVNEELLPYGASLLASLATRYLLD 425
>ILL2_ARATH (P54970) IAA-amino acid hydrolase ILR1-like 2 precursor (EC| 3.5.1.-) Length = 439 Score = 90.9 bits (224), Expect = 3e-18 Identities = 45/95 (47%), Positives = 64/95 (67%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 PPT+NN +L+ F KV +++G E P+MG+EDFS++ E +P ++ +GM +ET Sbjct: 333 PPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIP-GHFSLLGMQDETN 391 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYLLE 399 G A HSP + INED LPYGAA+ AS+A +YL E Sbjct: 392 G-YASSHSPLYRINEDVLPYGAAIHASMAVQYLKE 425
>ILL1_ARATH (P54969) IAA-amino acid hydrolase ILR1-like 1 precursor (EC| 3.5.1.-) Length = 438 Score = 87.8 bits (216), Expect = 3e-17 Identities = 43/93 (46%), Positives = 64/93 (68%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 PPT+NN +L+ F KV +++G E P MG+EDFS++ E +P ++ +GM +ET+ Sbjct: 332 PPTVNNMDLYKKFKKVVRDLLGQEAFVEAVPEMGSEDFSYFAETIP-GHFSLLGMQDETQ 390 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYL 405 G A HSP++ INED LPYGAA+ A++A +YL Sbjct: 391 G-YASSHSPHYRINEDVLPYGAAIHATMAVQYL 422
>ILL3_ARATH (O81641) IAA-amino acid hydrolase ILR1-like 3 precursor (EC| 3.5.1.-) Length = 428 Score = 85.9 bits (211), Expect = 1e-16 Identities = 43/97 (44%), Positives = 61/97 (62%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 P T+N+ +LH+F KV ++GP KV+ +M EDF+FY + +P YY +G+ NE Sbjct: 326 PATVNDHKLHEFTEKVLKLLLGPEKVKPANKVMAGEDFAFYQQKIPG-YYIGIGIRNEEI 384 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYLLEHQ 393 G HSPYF ++E+ LP G+A A+LA YL EHQ Sbjct: 385 GSVRSVHSPYFFLDENVLPIGSATFAALAEMYLQEHQ 421
>ILL6_ARATH (Q8VYX0) IAA-amino acid hydrolase ILR1-like 6 precursor (EC| 3.5.1.-) (Protein gr1) Length = 464 Score = 85.1 bits (209), Expect = 2e-16 Identities = 41/93 (44%), Positives = 61/93 (65%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 PPT NN ++ KV +++G + +MGAEDF+FY+E++P +Y F+G+ NE Sbjct: 368 PPTTNNDATYNHLKKVTIDLLGDSHFTLAPQMMGAEDFAFYSEIIPAAFY-FIGIRNEEL 426 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYL 405 G HSP+F I+ED+LP GAA+ A++A RYL Sbjct: 427 GSVHIAHSPHFMIDEDSLPVGAAVHAAVAERYL 459
>ILR1_ARATH (P54968) IAA-amino acid hydrolase ILR1 precursor (EC 3.5.1.-)| Length = 442 Score = 80.1 bits (196), Expect = 6e-15 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 1/96 (1%) Frame = -2 Query: 680 PTINNPE-LHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 P +NN E L++ KV M+G N + MG EDFSF+T+ K + +G+ NET Sbjct: 336 PVMNNDEGLYEHGKKVAEAMIGKNNFHDFPVTMGGEDFSFFTQKT-KAAIFVLGVKNETL 394 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARYLLEH 396 G P HSPYF ++E+ LP GAA+ A++A YL EH Sbjct: 395 GAGKPLHSPYFFVDEEALPVGAALHAAMAVSYLDEH 430
>CBPX1_SULSO (P80092) Thermostable carboxypeptidase 1 (EC 3.4.17.-)| Length = 393 Score = 70.9 bits (172), Expect = 4e-12 Identities = 38/92 (41%), Positives = 57/92 (61%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 P T+NNPE+ D +K+ S + + V E +P++GAEDFS + + P TY+ F+G NE + Sbjct: 303 PTTVNNPEVTDEVMKILSSI---STVVETEPVLGAEDFSRFLQKAPGTYF-FLGTRNEKK 358 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARY 408 G P+HS F ++ED L GA A LA ++ Sbjct: 359 GCIYPNHSSKFCVDEDVLKLGALAHALLAVKF 390
>CBPX2_SULSO (P58156) Thermostable carboxypeptidase 2 (EC 3.4.17.-)| Length = 393 Score = 67.4 bits (163), Expect = 4e-11 Identities = 37/92 (40%), Positives = 56/92 (60%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 P T+NNPE+ D +K+ S + + V E +P++GAEDFS + + P Y+ F+G NE + Sbjct: 303 PITVNNPEVTDEVMKILSSI---STVVETEPVLGAEDFSRFLQKAPGMYF-FLGTRNEKK 358 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARY 408 G P+HS F ++ED L GA A LA ++ Sbjct: 359 GCIYPNHSSKFCVDEDVLKLGALAHALLAIKF 390
>Y4TI_RHISN (P55663) Hypothetical hydrolase y4tI (EC 3.-.-.-)| Length = 402 Score = 51.6 bits (122), Expect = 2e-06 Identities = 23/78 (29%), Positives = 45/78 (57%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 P IN+PE+ F S+M G + + + + + G++DF FY++ +P Y++F + Sbjct: 307 PAVINDPEMVRLFRDAVSDMAGSDALTQGKAISGSDDFGFYSQCIPSIYFWFG---SGEP 363 Query: 503 GPQAPHHSPYFTINEDTL 450 G ++ H+P F +++D L Sbjct: 364 GNESGVHTPTFAVSDDVL 381
>HIPO_CAMJE (P45493) Hippurate hydrolase (EC 3.5.1.32) (Benzoylglycine| amidohydrolase) (Hippuricase) Length = 383 Score = 45.1 bits (105), Expect = 2e-04 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVR-EKQPLMGAEDFSFYTEVVPKTYYYFVGMLNET 507 P T+NN E DF +V E+ G +PLM +EDF F+ E + K Y F+ N+ Sbjct: 295 PVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFGFFCE-MKKCAYAFLENENDI 353 Query: 506 RGPQAPHHSPYFTINEDTLPYGAAMQASLAARYL 405 H+ + N+ L A+ A LA +YL Sbjct: 354 Y-----LHNSSYVFNDKLLARAASYYAKLALKYL 382
>AMHX_BACSU (P54983) Amidohydrolase amhX (EC 3.5.1.-) (Aminoacylase)| Length = 389 Score = 34.3 bits (77), Expect = 0.36 Identities = 21/92 (22%), Positives = 39/92 (42%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETR 504 P N E + +E++G ++ + G EDF FY VP +G+ Sbjct: 282 PAATQNKEAEAIMAEAITEIIGAERLDDPLVTTGGEDFHFYAVKVPNLKTTMLGL---GC 338 Query: 503 GPQAPHHSPYFTINEDTLPYGAAMQASLAARY 408 G Q H P+ T + + + G + A+ +++ Sbjct: 339 GLQPGLHHPHMTFDRNAMFTGIHILANACSKH 370
>YXEP_BACSU (P54955) Hypothetical protein yxeP| Length = 380 Score = 33.5 bits (75), Expect = 0.62 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -2 Query: 584 GAEDFSFYTEVVPKTYYYFVGMLNETRGPQAPHHSPYFTINEDTLPYGAAMQASLA 417 G EDF+ Y E +P +FV M T G + HH P FT++E+ L + A LA Sbjct: 323 GGEDFALYQEKIPG---FFVWM--GTNGTEEWHH-PAFTLDEEALTVASQYFAELA 372
>PUTA_SALTY (P10503) Bifunctional protein putA [Includes: Proline dehydrogenase| (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) (P5C dehydrogenase)] Length = 1320 Score = 32.0 bits (71), Expect = 1.8 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 3/121 (2%) Frame = -2 Query: 599 KQPLMGAEDFSFYTEVVPKTYYYFVGMLNETRGPQAPH---HSPYFTINEDTLPYGAAMQ 429 KQ + D ++ +P+ FVG NE+ P AP H P+ E LP + Sbjct: 34 KQAIFSYLDKLENSDTLPELPALFVGAANESEEPVAPQDEPHQPFLEFAEQILPQSVSRA 93 Query: 428 ASLAARYLLEHQLVTAAKVVEPRDEL*MVSMLNETAEGRAQQLLIKKRENKKKGKALGQM 249 A AA E V+ ++ + + E A A QL K R K G + Sbjct: 94 AITAAWRRPETDAVSML-----MEQARLSPPVAEQAHKLAYQLAEKLRNQKSASGRAGMV 148 Query: 248 K 246 + Sbjct: 149 Q 149
>EF3B_YEAST (P53978) Elongation factor 3B (EF-3B) (Translation elongation| factor 3B) (Homolog of EF-3) Length = 1043 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -2 Query: 677 TINNPELHDFFVKVGSEMVGPNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLN 513 T++N ++ F K+ + PN+V E L+GA +F EV P T V +L+ Sbjct: 199 TVDNKDIERFIPKLIECIANPNEVPETVHLLGAT--TFVAEVTPATLSIMVPLLS 251
>MAP1B_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (MAP1.2)| (MAP1(X)) [Contains: MAP1 light chain LC1] Length = 2464 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/65 (27%), Positives = 33/65 (50%) Frame = -2 Query: 617 PNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETRGPQAPHHSPYFTINEDTLPYGA 438 P+K + +M D + V + Y Y +G + G Q+P P +I+++TLP G+ Sbjct: 1033 PDKTEAEDYVMAVADKAAEAGVTEEQYGY-LGTSAKQPGIQSPSREPASSIHDETLPGGS 1091 Query: 437 AMQAS 423 +A+ Sbjct: 1092 ESEAT 1096
>DPOL_HBVAY (P03155) P protein [Includes: DNA-directed DNA polymerase (EC| 2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] (Fragment) Length = 750 Score = 30.4 bits (67), Expect = 5.2 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVREKQPL---MGAEDFSFYTEVVP-----KTYY 534 PP+ N LH +K + VGP V EK+ L M A + +T+ +P K YY Sbjct: 76 PPSFPNIHLHQDIIKKCEQFVGPLTVNEKRRLKLIMPARFYPNFTKYLPLDKGIKPYY 133
>MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Neuraxin)| [Contains: MAP1 light chain LC1] Length = 2459 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/65 (27%), Positives = 33/65 (50%) Frame = -2 Query: 617 PNKVREKQPLMGAEDFSFYTEVVPKTYYYFVGMLNETRGPQAPHHSPYFTINEDTLPYGA 438 P+K + +M D + V + Y F+G + G Q+P P +I+++TLP G+ Sbjct: 1029 PDKTEAEDYVMAVVDKAAEAGVT-EDQYDFLGTPAKQPGVQSPSREPASSIHDETLPGGS 1087 Query: 437 AMQAS 423 +A+ Sbjct: 1088 ESEAT 1092
>SPR4_CAEEL (O17582) Suppressor of presenilin protein 4| Length = 1311 Score = 30.0 bits (66), Expect = 6.9 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 7/76 (9%) Frame = +2 Query: 35 RTCIIHDC-------TQXITRTRLSADTKTNETYHRITCAQCFHKVICSLVMH*NQETMY 193 + C I +C TQ I + DTKT HR C C H+ Y Sbjct: 451 KKCNIGECEFLTQTLTQLIVHKVKTHDTKTAFPQHRFLCLTCGHRA-----------KSY 499 Query: 194 RQLHNHPAIQRSSSNK 241 L H I+ +S++K Sbjct: 500 AALRTHKLIEHTSTHK 515
>Y100_SYNY3 (P54984) Hypothetical protein sll0100| Length = 393 Score = 29.6 bits (65), Expect = 9.0 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = -2 Query: 683 PPTINNPELHDFFVKVGSEMVGPNKVRE-KQPLMGAEDFSFYTEVVPKTYYYFVGMLNET 507 P N+ +L+ E G + ++ +P +GAEDF+ Y E P + +G Sbjct: 296 PSVQNDAQLNKLLENAVREAWGESALQIIPEPSLGAEDFALYLEHAPGAMFR-LGTGFGD 354 Query: 506 RGPQAPHHSPYFTINEDTLPYGAAMQASLAARY 408 R P H P F +E + G + A +Y Sbjct: 355 RQMNHPLHHPRFEADEAAILTGVVTLSYAAWQY 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,355,802 Number of Sequences: 219361 Number of extensions: 2103981 Number of successful extensions: 5633 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 5398 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5620 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
