| Clone Name | rbags13e05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ABP4_MAIZE (P33488) Auxin-binding protein 4 precursor (ABP) | 87 | 1e-17 | 2 | ABP1_MAIZE (P13689) Auxin-binding protein 1 precursor (ABP) (ERA... | 87 | 2e-17 | 3 | ABP1_TOBAC (P33490) Auxin-binding protein T85 precursor (ABP) | 75 | 5e-14 | 4 | ABP2_TOBAC (P33491) Auxin-binding protein T92 precursor (ABP) | 69 | 3e-12 | 5 | ABP1_ARATH (P33487) Auxin-binding protein 1 precursor (ABP) | 57 | 1e-08 | 6 | ABP5_MAIZE (P33489) Auxin-binding protein 5 precursor (ABP) (ERA... | 47 | 1e-05 |
|---|
>ABP4_MAIZE (P33488) Auxin-binding protein 4 precursor (ABP)| Length = 204 Score = 87.0 bits (214), Expect = 1e-17 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = -1 Query: 166 GTPQEIPVAQNSTFTVPVNDPXQVWXXDEHEDLXVLVIISRPPVXIFLYDXXSM 5 G PQE+PV QN+TF++PVNDP QVW +EHEDL VLVIISRPPV IF+YD SM Sbjct: 126 GQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRPPVKIFIYDDWSM 179
>ABP1_MAIZE (P13689) Auxin-binding protein 1 precursor (ABP) (ERABP1)| Length = 201 Score = 86.7 bits (213), Expect = 2e-17 Identities = 40/54 (74%), Positives = 43/54 (79%) Frame = -1 Query: 166 GTPQEIPVAQNSTFTVPVNDPXQVWXXDEHEDLXVLVIISRPPVXIFLYDXXSM 5 G PQEIP QN+TF++PVNDP QVW DEHEDL VLVIISRPP IFLYD SM Sbjct: 123 GQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPPAKIFLYDDWSM 176
>ABP1_TOBAC (P33490) Auxin-binding protein T85 precursor (ABP)| Length = 187 Score = 75.1 bits (183), Expect = 5e-14 Identities = 34/54 (62%), Positives = 39/54 (72%) Frame = -1 Query: 166 GTPQEIPVAQNSTFTVPVNDPXQVWXXDEHEDLXVLVIISRPPVXIFLYDXXSM 5 G PQE + NSTF +PVND QVW EHEDL VLV+ISRPPV +F+YD SM Sbjct: 107 GNPQEFHIFPNSTFHIPVNDVHQVWNTGEHEDLQVLVVISRPPVKVFMYDDWSM 160
>ABP2_TOBAC (P33491) Auxin-binding protein T92 precursor (ABP)| Length = 187 Score = 69.3 bits (168), Expect = 3e-12 Identities = 32/54 (59%), Positives = 37/54 (68%) Frame = -1 Query: 166 GTPQEIPVAQNSTFTVPVNDPXQVWXXDEHEDLXVLVIISRPPVXIFLYDXXSM 5 G PQE + NSTF +PVND QVW E EDL VL +ISRPPV +F+YD SM Sbjct: 107 GNPQEFHIFPNSTFHIPVNDVHQVWNTGEQEDLQVLDVISRPPVKVFMYDDWSM 160
>ABP1_ARATH (P33487) Auxin-binding protein 1 precursor (ABP)| Length = 198 Score = 57.4 bits (137), Expect = 1e-08 Identities = 28/50 (56%), Positives = 34/50 (68%) Frame = -1 Query: 166 GTPQEIPVAQNSTFTVPVNDPXQVWXXDEHEDLXVLVIISRPPVXIFLYD 17 G P E P+ NST +P+ND QV HEDL VLVIISRPP+ IF+Y+ Sbjct: 120 GKPIEFPIFANSTIHIPINDAHQVKNTG-HEDLQVLVIISRPPIKIFIYE 168
>ABP5_MAIZE (P33489) Auxin-binding protein 5 precursor (ABP) (ERABP5)| (Fragment) Length = 150 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/25 (72%), Positives = 22/25 (88%) Frame = -1 Query: 166 GTPQEIPVAQNSTFTVPVNDPXQVW 92 G PQE+PV QN+TF++PVNDP QVW Sbjct: 126 GQPQEVPVFQNTTFSIPVNDPHQVW 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,924,553 Number of Sequences: 219361 Number of extensions: 174788 Number of successful extensions: 187 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 186 length of database: 80,573,946 effective HSP length: 30 effective length of database: 73,993,116 effective search space used: 1775834784 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)