ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13e04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 935 Score = 270 bits (136), Expect = 4e-69 Identities = 213/239 (89%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 669 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 610 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 379 ||||||||||||||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 609 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctcaagctcc 550 Query: 380 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 439 |||| || |||| ||||||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 549 ctgatggtgtcatagtagttccagccaacctccttggagagctggccgaggaggcagtac 490 Query: 440 ttatgacccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggt 498 || || || ||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 489 ttgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggt 431
>dbj|AK106078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A04, full insert sequence Length = 1048 Score = 270 bits (136), Expect = 4e-69 Identities = 213/239 (89%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 679 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 620 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 379 ||||||||||||||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 619 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctcaagctcc 560 Query: 380 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 439 |||| || |||| ||||||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 559 ctgatggtgtcatagtagttccagccaacctccttggagagctggccgaggaggcagtac 500 Query: 440 ttatgacccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggt 498 || || || ||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 499 ttgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggt 441
>dbj|AK103893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150E09, full insert sequence Length = 943 Score = 270 bits (136), Expect = 4e-69 Identities = 213/239 (89%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 679 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 620 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 379 ||||||||||||||||| || | ||||||||||||||||||||||||||||| || ||| Sbjct: 619 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctcaagctcc 560 Query: 380 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 439 |||| || |||| ||||||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 559 ctgatggtgtcatagtagttccagccaacctccttggagagctggccgaggaggcagtac 500 Query: 440 ttatgacccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggt 498 || || || ||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 499 ttgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggt 441
>gb|BT016389.1| Zea mays clone Contig222 mRNA sequence Length = 880 Score = 262 bits (132), Expect = 1e-66 Identities = 212/239 (88%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 ||||||||||| |||| ||||||||| || |||||||| |||||||| |||||||||||| Sbjct: 655 tccaactgagaccccaacttctcctcggctgccttctcggccttgacacgcagcttggcc 596 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcc 379 | ||||||| |||| ||||| | ||||||||||||||||||||||||||||| |||||| Sbjct: 595 aattgcttcttcctctcgtaggcaaccttggccttctccttcctcttctcctcaagttcc 536 Query: 380 ttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtac 439 |||| || |||||||||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 535 ctgatggtgtcatggtagttccacccgacctccttagagagctcgccgaggaggcagtac 476 Query: 440 ttatgacccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggt 498 || || || ||||| ||||||| |||||| || ||||| |||||||||||||||||||| Sbjct: 475 ttgtgtccaggctgtagcctcagaaccttaagagcgtcagggatgaccatacgcttggt 417
>gb|AY846823.1| Triticum aestivum ribosomal protein L13a mRNA, complete cds Length = 666 Score = 242 bits (122), Expect = 9e-61 Identities = 214/245 (87%) Strand = Plus / Minus Query: 254 aggatgtccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagc 313 ||||| |||| ||||| |||| ||||||||| || |||||||| ||||||||||| ||| Sbjct: 620 aggatctccagctgagttcccaacttctcctcggccgccttctcggccttgacgcggagc 561 Query: 314 ttggccagttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctcc 373 || ||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 560 ttcgccagttgctttctcctgtcgtaggagaccttggccttctcctttctcttttcctcc 501 Query: 374 agttccttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaagg 433 || ||| |||| || || ||||||||| |||||||||||||| |||| |||||| ||| Sbjct: 500 agctccctgatggtgtcggcgtagttccatccgacctccttggagagctggccgaggagg 441 Query: 434 cagtacttatgacccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgc 493 |||||| | || || ||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 440 cagtacctgtgcccaggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgc 381 Query: 494 ttggt 498 ||||| Sbjct: 380 ttggt 376
>ref|XM_476399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 194 bits (98), Expect = 2e-46 Identities = 202/237 (85%) Strand = Plus / Minus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 675 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 616 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 384 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 615 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 556 Query: 385 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 444 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 555 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 496 Query: 445 acccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggtgcg 501 || ||||| || | | ||||||||| |||||||||| |||||| ||||||||||| Sbjct: 495 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcg 439
>ref|XM_506141.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1567_G09.119 mRNA Length = 863 Score = 194 bits (98), Expect = 2e-46 Identities = 202/237 (85%) Strand = Plus / Minus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 679 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 620 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 384 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 619 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 560 Query: 385 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 444 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 559 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 500 Query: 445 acccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggtgcg 501 || ||||| || | | ||||||||| |||||||||| |||||| ||||||||||| Sbjct: 499 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcg 443
>dbj|AK103048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G12, full insert sequence Length = 859 Score = 194 bits (98), Expect = 2e-46 Identities = 202/237 (85%) Strand = Plus / Minus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 675 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 616 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 384 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 615 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 556 Query: 385 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 444 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 555 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 496 Query: 445 acccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggtgcg 501 || ||||| || | | ||||||||| |||||||||| |||||| ||||||||||| Sbjct: 495 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcg 439
>dbj|AK063806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G03, full insert sequence Length = 863 Score = 194 bits (98), Expect = 2e-46 Identities = 202/237 (85%) Strand = Plus / Minus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 679 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 620 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgat 384 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 619 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattccctgat 560 Query: 385 agtttcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatg 444 || || ||||||||||| |||||||||||||| |||| |||||| ||||||||||| || Sbjct: 559 ggtgtcgtggtagttccagccgacctccttggagagctggccgaggaggcagtacttgtg 500 Query: 445 acccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggtgcg 501 || ||||| || | | ||||||||| |||||||||| |||||| ||||||||||| Sbjct: 499 gccgggctggaggcgaagaaccttgagggcgtcggggacgaccatgcgcttggtgcg 443
>gb|BT017778.1| Zea mays clone EL01N0503C05.c mRNA sequence Length = 826 Score = 176 bits (89), Expect = 5e-41 Identities = 175/204 (85%) Strand = Plus / Minus Query: 295 ctcagccttgacgcgcagcttggccagttgcttcctcctgtcgtaagagaccttggcctt 354 ||||||||| | ||||||||||||||| ||||||||||| || || | ||||| ||||| Sbjct: 609 ctcagcctttaggcgcagcttggccagctgcttcctcctctcataggccaccttagcctt 550 Query: 355 ctccttcctcttctcctccagttccttgatagtttcatggtagttccacccgacctcctt 414 |||||||||||||||||| || ||| |||| || |||||||||||||| ||||||||||| Sbjct: 549 ctccttcctcttctcctcaagctccctgatggtgtcatggtagttccatccgacctcctt 490 Query: 415 ggaaagctcgccgagaaggcagtacttatgacccggctgcagcctcanaaccttgagcgc 474 |||||||| || || ||||||||||| || || || |||||||||| |||||| || || Sbjct: 489 agaaagctccccaaggaggcagtacttgtgtcctggttgcagcctcagaaccttaagagc 430 Query: 475 gtcggggatgaccatacgcttggt 498 ||| |||||||||| |||||||| Sbjct: 429 gtcagggatgaccaggcgcttggt 406
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 30901100 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 30901041 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 372 ||||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 30901040 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctc 30900988 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30900135 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30900076 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 30900075 ggctgcagcctcagaacc 30900058 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30886147 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30886206 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 30886207 ggctgcagcctcagaacc 30886224 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 30899966 cttgagcgcgtcggggatgaccatgcgcttggt 30899934 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 30886326 cttgagcgcgtcggggatgaccatgcgcttggt 30886358 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gccttctccttcctcttctcctcc 373 |||||| ||||||||||||||||| Sbjct: 34372674 gccttcaccttcctcttctcctcc 34372697
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 41990 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 42049 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 372 ||||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 42050 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctc 42102 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 56943 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 56884 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 56883 ggctgcagcctcagaacc 56866 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 42955 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 43014 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 43015 ggctgcagcctcagaacc 43032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 56764 cttgagcgcgtcggggatgaccatgcgcttggt 56732 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 43124 cttgagcgcgtcggggatgaccatgcgcttggt 43156
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 30991623 tccagctgaggacccagcttctcctcggctgccttctcagccttgacacgcagcttcgcc 30991564 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 372 ||||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 30991563 agttgcttcctcctgtcataggcaaccttggccttctccttcctcttctcctc 30991511 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30990658 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30990599 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 30990598 ggctgcagcctcagaacc 30990581 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 30976670 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 30976729 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 30976730 ggctgcagcctcagaacc 30976747 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 30990489 cttgagcgcgtcggggatgaccatgcgcttggt 30990457 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 30976849 cttgagcgcgtcggggatgaccatgcgcttggt 30976881 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gccttctccttcctcttctcctcc 373 |||||| ||||||||||||||||| Sbjct: 34463146 gccttcaccttcctcttctcctcc 34463169
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 |||| |||||| |||||||||||||| || | ||||||||||||||| |||||||||||| Sbjct: 70452 tccagctgagatcccagcttctcctcggctgtcttctcagccttgacacgcagcttggcc 70393 Query: 320 agttgcttcctcctgtcgtaagagaccttggccttctccttcctcttctcctc 372 |||||||||||||| || || | ||||||||||||||||||||||||||||| Sbjct: 70392 agttgcttcctcctctcataggcaaccttggccttctccttcctcttctcctc 70340 Score = 93.7 bits (47), Expect = 5e-16 Identities = 70/78 (89%) Strand = Plus / Minus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||||||||||||| ||||||||||| || ||||||||||| ||||||||||| || || Sbjct: 69543 tcatggtagttccatccgacctccttagagagctcgccgaggaggcagtacttgtgccca 69484 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 69483 ggctgcagcctcagaacc 69466
>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence Length = 1506 Score = 137 bits (69), Expect = 4e-29 Identities = 110/124 (88%) Strand = Plus / Minus Query: 375 gttccttgatagtttcatggtagttccacccgacctccttggaaagctcgccgagaaggc 434 ||||| |||| || |||||||||||||||||||||||||| || ||||||||||| |||| Sbjct: 1028 gttccctgatggtgtcatggtagttccacccgacctccttagagagctcgccgaggaggc 969 Query: 435 agtacttatgacccggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgct 494 ||||||| || || ||||| ||||||| |||||| || ||||| |||||||||||||||| Sbjct: 968 agtacttgtgtccaggctgtagcctcagaaccttaagagcgtcagggatgaccatacgct 909 Query: 495 tggt 498 |||| Sbjct: 908 tggt 905 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 260 tccaactgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggcc 319 ||||||||||| |||| ||||||||| || |||||||| |||||||| |||||||||||| Sbjct: 1143 tccaactgagaccccaacttctcctcggctgccttctcggccttgacacgcagcttggcc 1084 Query: 320 agttgcttcctcctgtcgta 339 | ||||||| |||| ||||| Sbjct: 1083 aattgcttcttcctctcgta 1064
>ref|XM_469811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 947 Score = 133 bits (67), Expect = 6e-28 Identities = 99/110 (90%) Strand = Plus / Minus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 389 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 330 Query: 449 ggctgcagcctcanaaccttgagcgcgtcggggatgaccatacgcttggt 498 ||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 329 ggctgcagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggt 280
>dbj|AK066603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071H21, full insert sequence Length = 2212 Score = 131 bits (66), Expect = 2e-27 Identities = 95/105 (90%) Strand = Plus / Minus Query: 394 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 453 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 576 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 517 Query: 454 cagcctcanaaccttgagcgcgtcggggatgaccatacgcttggt 498 |||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 516 cagcctcagaaccttgagcgcgtcggggatgaccatgcgcttggt 472
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 522950 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 523009 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcct 380 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 523010 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcct 523065 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 392 tggtagttccacccgacctccttggaaagctcgccgagaaggcagtactt 441 ||||||||||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 524138 tggtagttccagccgacctccttggagagctggccgaggaggcagtactt 524187 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cttgagcgcgtcggggatgaccatacgcttggtgcg 501 |||||| |||||||||| |||||| ||||||||||| Sbjct: 524288 cttgagggcgtcggggacgaccatgcgcttggtgcg 524323
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 125114 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 125173 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcct 380 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 125174 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcct 125229 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 392 tggtagttccacccgacctccttggaaagctcgccgagaaggcagtactt 441 ||||||||||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 126302 tggtagttccagccgacctccttggagagctggccgaggaggcagtactt 126351 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cttgagcgcgtcggggatgaccatacgcttggtgcg 501 |||||| |||||||||| |||||| ||||||||||| Sbjct: 126452 cttgagggcgtcggggacgaccatgcgcttggtgcg 126487
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 265 ctgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttg 324 ||||||||||||||||||||| ||||| |||||||||||||| || ||| | | | ||| Sbjct: 76862 ctgagaacccagcttctcctcagcagctttctcagccttgacacgaagccttgttaattg 76921 Query: 325 cttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttcct 380 ||||||||| ||||| | ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 76922 cttcctcctctcgtatgcaaccttagccttctcctttctcttctcctccaattcct 76977 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 392 tggtagttccacccgacctccttggaaagctcgccgagaaggcagtactt 441 ||||||||||| |||||||||||||| |||| |||||| ||||||||||| Sbjct: 78050 tggtagttccagccgacctccttggagagctggccgaggaggcagtactt 78099 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cttgagcgcgtcggggatgaccatacgcttggtgcg 501 |||||| |||||||||| |||||| ||||||||||| Sbjct: 78200 cttgagggcgtcggggacgaccatgcgcttggtgcg 78235
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 77.8 bits (39), Expect = 3e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 389 tcatggtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgaccc 448 |||| ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || Sbjct: 54969 tcatagtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgccca 54910 Query: 449 ggctgcagcctcanaacc 466 ||||||||||||| |||| Sbjct: 54909 ggctgcagcctcagaacc 54892 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 54790 cttgagcgcgtcggggatgaccatgcgcttggt 54758
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 394 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 453 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 110430 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 110371 Query: 454 cagcctcanaacc 466 |||||||| |||| Sbjct: 110370 cagcctcagaacc 110358 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 110257 cttgagcgcgtcggggatgaccatgcgcttggt 110225
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 394 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 453 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 15019 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 14960 Query: 454 cagcctcanaacc 466 |||||||| |||| Sbjct: 14959 cagcctcagaacc 14947 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 14846 cttgagcgcgtcggggatgaccatgcgcttggt 14814
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 394 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 453 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 12943094 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 12943035 Query: 454 cagcctcanaacc 466 |||||||| |||| Sbjct: 12943034 cagcctcagaacc 12943022 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 12942921 cttgagcgcgtcggggatgaccatgcgcttggt 12942889
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 75.8 bits (38), Expect = 1e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 394 gtagttccacccgacctccttggaaagctcgccgagaaggcagtacttatgacccggctg 453 ||||||||| || ||||||||||| |||| |||||| ||||||||||| || || ||||| Sbjct: 13023301 gtagttccagccaacctccttggagagctggccgaggaggcagtacttgtgcccaggctg 13023242 Query: 454 cagcctcanaacc 466 |||||||| |||| Sbjct: 13023241 cagcctcagaacc 13023229 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 466 cttgagcgcgtcggggatgaccatacgcttggt 498 |||||||||||||||||||||||| |||||||| Sbjct: 13023128 cttgagcgcgtcggggatgaccatgcgcttggt 13023096
>gb|AY498745.1| Capsicum annuum 60S ribosomal protein L13a (RpL13a) mRNA, complete cds Length = 797 Score = 67.9 bits (34), Expect = 3e-08 Identities = 101/122 (82%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 266 tgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttgc 325 |||| ||| ||||||||||| |||||||| |||||||| || | || |||||||| ||| Sbjct: 655 tgaggaccgagcttctcctcggcagcctt-tcagccttaaccctgagtttggccagctgc 597 Query: 326 ttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgata 385 || ||||| || |||| ||||| ||| ||||||| ||||| ||||| || ||||||||| Sbjct: 596 tttctcctctcataagtgacctgggctctctcctttctcttgtcctcgagctccttgata 537 Query: 386 gt 387 || Sbjct: 536 gt 535
>ref|XM_509965.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452925), mRNA Length = 581 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 416 cttggccttctccttcctcttctcctccag 387
>ref|XM_526928.1| PREDICTED: Pan troglodytes integrin alpha 2 (LOC471550), mRNA Length = 3000 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 2883 cttggccttctccttcctcttctcctccag 2854
>ref|XM_514152.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC457684), mRNA Length = 663 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 495 cttggccttctccttcctcttctcctccag 466
>gb|AC125807.9| Homo sapiens 12 BAC RP11-253E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131995 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 81648 cttggccttctccttcctcttctcctccag 81677
>gb|AC020750.4| Homo sapiens chromosome 3 clone RP11-105H19 map 3p, complete sequence Length = 156933 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 95042 cttggccttctccttcctcttctcctccag 95013
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 188727 cttggccttctccttcctcttctcctccag 188756
>gb|AC003072.1|AC003072 Human BAC clone CTA-963H5 from 22q12.1-qter, complete sequence Length = 39401 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||||||||||||||||||||| Sbjct: 2080 cttggccttctccttcctcttctcctccag 2109
>gb|U18488.1|STU18488 Salmo trutta transplantation antigen mRNA, partial cds Length = 621 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctcca 374 ||||||||||||||||||||||||||||| Sbjct: 455 cttggccttctccttcctcttctcctcca 427
>gb|DQ200397.1| Solanum tuberosum clone 070F10 60S ribosomal protein L13a-like protein mRNA, complete cds Length = 848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 266 tgagaacccagcttctcctctgcagccttctcagccttgacgcgcagcttggccagttgc 325 |||| ||| ||||||||||| ||||||||||| ||||| || | || ||||||| ||| Sbjct: 629 tgaggaccgagcttctcctcagcagccttctcggccttaaccctgagtttggccaactgc 570 Query: 326 ttcctcctgtcgtaagagaccttggccttctccttcctcttctcctccagttccttgata 385 || ||||| ||||| | |||| ||| ||||||| ||||| | ||| || ||||||||| Sbjct: 569 tttctcctctcgtatgctacctgggctctctcctttctcttgttctcaagctccttgata 510 Query: 386 gtttcat 392 || |||| Sbjct: 509 gtgtcat 503
>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence Length = 176188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 349 ggccttctccttcctcttctcctccag 375 ||||||||||||||||||||||||||| Sbjct: 137634 ggccttctccttcctcttctcctccag 137660
>gb|AC035139.11| Homo sapiens chromosome 10 clone RP11-563N6, complete sequence Length = 210472 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 349 ggccttctccttcctcttctcctccag 375 ||||||||||||||||||||||||||| Sbjct: 1517 ggccttctccttcctcttctcctccag 1543
>gb|AC022533.10| Homo sapiens chromosome 10 clone RP11-230D19, complete sequence Length = 174569 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 349 ggccttctccttcctcttctcctccag 375 ||||||||||||||||||||||||||| Sbjct: 136041 ggccttctccttcctcttctcctccag 136015
>ref|XM_520729.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465277), mRNA Length = 662 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 514 cttggctttctccttcctcttctcctccag 485
>ref|XM_508935.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC451757), mRNA Length = 690 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||||||||| Sbjct: 423 cttggccttctcctttctcttctcctccag 394
>gb|DQ216006.1| Taeniopygia guttata clone 0061P0024G09 ribosomal protein L13A-like mRNA, complete sequence Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||||| |||||||||||| Sbjct: 499 cttggccttctccttccgcttctcctccag 470
>gb|DQ216003.1| Taeniopygia guttata clone 0058P0045E08 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||||| |||||||||||| Sbjct: 528 cttggccttctccttccgcttctcctccag 499
>gb|DQ216001.1| Taeniopygia guttata clone 0058P0049C02 ribosomal protein L13A-like mRNA, complete sequence Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||||| |||||||||||| Sbjct: 528 cttggccttctccttccgcttctcctccag 499
>ref|XM_526130.1| PREDICTED: Pan troglodytes similar to APG7 autophagy 7-like; ubiquitin activating enzyme E1-like protein (LOC470747), mRNA Length = 2091 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||||||||| ||||||||||||||||| Sbjct: 169 cttggccttctcattcctcttctcctccag 198
>ref|XM_533620.2| PREDICTED: Canis familiaris Ribosomal protein L13a (RPL13A), mRNA Length = 525 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||| |||||||||||||||||| Sbjct: 372 cttggccttcttcttcctcttctcctccag 343
>gb|BC043976.1| Xenopus laevis ribosomal protein L13a, mRNA (cDNA clone MGC:54018 IMAGE:5571546), complete cds Length = 819 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||||||||| Sbjct: 584 cttggccttctcctttctcttctcctccag 555
>emb|AJ843089.1| Platichthys flesus mRNA for 60S ribosomal protein L13A (rpl13A gene) Length = 686 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||||||||| Sbjct: 522 cttggccttctcctttctcttctcctccag 493
>gb|BC067891.1| Homo sapiens cDNA clone MGC:87657 IMAGE:5271409, complete cds Length = 1488 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 431 cttggctttctccttcctcttctcctccag 402
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 2917 cttggctttctccttcctcttctcctccag 2946
>gb|BC103039.1| Bos taurus cDNA clone MGC:128198 IMAGE:7984430, complete cds Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||||||||| Sbjct: 518 cttggccttctcctttctcttctcctccag 489
>gb|AC084878.12| Homo sapiens 12q BAC RP11-101K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 135060 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||| ||||||||||||||||||||||||| Sbjct: 77781 cttgaccttctccttcctcttctcctccag 77810
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||||| |||||||||||| Sbjct: 60141 cttggccttctccttccacttctcctccag 60112
>ref|XM_936627.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC647572), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 430 cttggctttctccttcctcttctcctccag 401
>ref|XM_928691.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA Length = 1466 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 430 cttggctttctccttcctcttctcctccag 401
>gb|BC105558.1| Bos taurus cDNA clone IMAGE:8120112, with apparent retained intron Length = 2007 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||||||||| Sbjct: 1303 cttggccttctcctttctcttctcctccag 1274
>ref|NG_002538.1| Homo sapiens ribosomal protein L13a pseudogene 2 (RPL13AP2) on chromosome 14 Length = 773 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcct 371 |||||||||||||||||||||||||| Sbjct: 530 cttggccttctccttcctcttctcct 505
>gb|AC018523.9|AC018523 Homo sapiens chromosome , clone RP11-140L24, complete sequence Length = 166507 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 162299 cttggctttctccttcctcttctcctccag 162328
>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194760 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcct 371 |||||||||||||||||||||||||| Sbjct: 115340 cttggccttctccttcctcttctcct 115365
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||||||||||||||||||||| Sbjct: 124955 cttggctttctccttcctcttctcctccag 124984
>emb|X56933.1|BTAPAS B.taurus mRNA, alternative polyadenylation signals Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||||||||| Sbjct: 493 cttggccttctcctttctcttctcctccag 464
>gb|AY650304.1| Macaca fascicularis ribosomal protein L13A mRNA, partial cds Length = 462 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctcca 374 |||||| |||||||||||||||||||||| Sbjct: 366 cttggctttctccttcctcttctcctcca 338
>ref|NM_001016486.2| Xenopus tropicalis hypothetical protein LOC549240 (LOC549240), mRNA Length = 771 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctcca 374 ||||||||||||||| ||||||||||||| Sbjct: 584 cttggccttctcctttctcttctcctcca 556
>gb|AC006043.1| Homo sapiens BAC clone RP11-538D15 from 7, complete sequence Length = 189036 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||||||||||||||||||||||| Sbjct: 115153 cttggccttctccttcctcttctcc 115129
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||||||||||||||||||||||| Sbjct: 206963 cttggccttctccttcctcttctcc 206939
>ref|NM_203308.1| Homo sapiens ribosomal protein L13A-like (MGC34774), mRNA Length = 1848 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||||||||||||||||||||||| Sbjct: 1096 cttggccttctccttcctcttctcc 1072
>dbj|AB168305.1| Macaca fascicularis testis cDNA clone: QtsA-11103, similar to human ribosomal protein L13a (RPL13A), mRNA, RefSeq: NM_012423.2 Length = 680 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctcca 374 |||||| |||||||||||||||||||||| Sbjct: 517 cttggctttctccttcctcttctcctcca 489
>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete sequence Length = 185838 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||||||||||||||||||||||| Sbjct: 9142 cttggccttctccttcctcttctcc 9118
>gb|AC148689.1| Macaca mulatta Major Histocompatibility Complex BAC MMU222I18, complete sequence Length = 174202 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||||||||||||||||||||||| Sbjct: 106204 cttggccttctccttcctcttctcc 106180
>gb|BC027852.1| Homo sapiens ribosomal protein L13A-like, mRNA (cDNA clone MGC:34774 IMAGE:5207622), complete cds Length = 1848 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||||||||||||||||||||||| Sbjct: 1096 cttggccttctccttcctcttctcc 1072
>emb|CR760846.2| Xenopus tropicalis finished cDNA, clone TTpA004d22 Length = 771 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctcca 374 ||||||||||||||| ||||||||||||| Sbjct: 584 cttggccttctcctttctcttctcctcca 556
>gb|BC052385.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:57944 IMAGE:5703859), complete cds Length = 3018 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 2014 ccttctccttcctcttctcctcca 1991
>ref|NM_026539.1| Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA Length = 2991 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 2032 ccttctccttcctcttctcctcca 2009
>ref|XR_002787.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 344 accttggccttctccttcctcttctcctccag 375 ||||||||||||||||||| ||||||||||| Sbjct: 517 accttggccttctccttccgtttctcctccag 486
>ref|XR_004732.1| PREDICTED: Mus musculus similar to ribosomal protein L13a (LOC624863), mRNA Length = 632 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 344 accttggccttctccttcctcttctcctccag 375 ||||||||||||||||||| ||||||||||| Sbjct: 517 accttggccttctccttccgtttctcctccag 486
>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence Length = 191814 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 25560 ccttctccttcctcttctcctcca 25583
>gb|BC020486.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone IMAGE:3708149) Length = 1179 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 202 ccttctccttcctcttctcctcca 179
>gb|AC121768.2| Mus musculus BAC clone RP23-339H16 from 15, complete sequence Length = 199607 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 350 gccttctccttcctcttctcctcc 373 |||||||||||||||||||||||| Sbjct: 60994 gccttctccttcctcttctcctcc 61017
>gb|BC057567.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:66868 IMAGE:6415898), complete cds Length = 3037 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 2043 ccttctccttcctcttctcctcca 2020
>dbj|AK165656.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430108O15 product:chromodomain helicase DNA binding protein 1-like, full insert sequence Length = 2716 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 2057 ccttctccttcctcttctcctcca 2034
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 344 accttggccttctccttcctcttctcctccag 375 ||||||||||||||||||| ||||||||||| Sbjct: 124043 accttggccttctccttccgtttctcctccag 124074
>dbj|AK014473.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432404A22 product:CDNA FLJ10480 FIS, CLONE NT2RP2000126, WEAKLY SIMILAR TO POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2991 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 2032 ccttctccttcctcttctcctcca 2009
>gb|AC140839.9| Mus musculus chromosome 3, clone RP24-316D12, complete sequence Length = 168722 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 69068 ccttctccttcctcttctcctcca 69045
>gb|BC062966.1| Mus musculus chromodomain helicase DNA binding protein 1-like, mRNA (cDNA clone MGC:64788 IMAGE:6415898), complete cds Length = 3066 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcca 374 |||||||||||||||||||||||| Sbjct: 2043 ccttctccttcctcttctcctcca 2020
>gb|BC047855.1| Danio rerio ribosomal protein L13a, mRNA (cDNA clone MGC:56275 IMAGE:5602342), complete cds Length = 819 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccagt 376 ||||||||| ||||| ||||||||||||||| Sbjct: 604 cttggccttttcctttctcttctcctccagt 574
>ref|XM_848715.1| PREDICTED: Canis familiaris similar to IQ motif containing D (LOC611081), mRNA Length = 1574 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 345 ccttggccttctccttcctcttctcct 371 |||||||||||||||||| |||||||| Sbjct: 1423 ccttggccttctccttccccttctcct 1397
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctcc 373 ||||||||||||||||||||||| Sbjct: 49266 ccttctccttcctcttctcctcc 49288
>emb|BX000688.11| Human DNA sequence from clone DAQB-36F16 on chromosome 6 Contains the GPR53P pseudogene for G protein-coupled receptor 53, the OR2I1P pseudogene for olfactory receptor, family 2, subfamily I, member 1, the UBD gene for ubiquitin D, the OR2H5P pseudogene for olfactory receptor, family 2, subfamily H, member 5, the RPL13AP pseudogene for ribosomal protein L13a, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, and 3 CpG islands, complete sequence Length = 102684 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 50599 cttggccttctccttcctcttct 50577 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 49210 cttggtcttctccttcctcttctcc 49186
>emb|AL662826.11| Human DNA sequence from clone XXbac-101I20 on chromosome 6 contains a MAS1 oncogene pseudogene, a olfactory receptor, family 2, subfamily I, member 1 pseudogene (OR2I1P, HS6M1-14P), the UBD gene for ubiquitin D (FAT10), a olfactory receptor, family 2, subfamily H, member 5 pseudogene (OR2H5P, HS6M1-13P), a 60S ribosomal protein L13A (RPL13A) pseudogene, the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2 (HS6M1-12), the GABBR1 gene for gamma-aminobutryic acid (GABA) B receptor, 1 (GPRC3A, GABABR1), the 5' end of the MOG gene for myelin oligodendrocyte protein and three CpG islands, complete sequence Length = 145431 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 57020 cttggccttctccttcctcttct 56998 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 55631 cttggtcttctccttcctcttctcc 55607
>emb|AL645936.5| Human DNA sequence from clone XXbac-126D10 on chromosome 6 contains the OR2H2 gene for olfactory receptor, family 2, subfamily H, member 2, the OR2I1P and OR2H5P pseudogenes for olfactory receptor, family 2, subfamily I, member 1 and subfamily H, member 5, the UBD gene for ubiquitin D, a 60S ribosomal protein L13A (RPL13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor, 1, a SMT3 suppressor of mif two 3 homolog 1 (SMT3H1) pseudogene, the MOG gene for myelin oligodendrocyte glycoprotein, the gene for a novel KRAB box-containing C2H2 type zinc finger protein and four CpG islands, complete sequence Length = 155874 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 33892 cttggccttctccttcctcttct 33870 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 32503 cttggtcttctccttcctcttctcc 32479
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctcc 373 ||||||||||||||||||||||| Sbjct: 102368 ccttctccttcctcttctcctcc 102390
>emb|CR759766.5| Human DNA sequence from clone DAMA-BMC177C8 on chromosome 6, complete sequence Length = 127280 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 28918 cttggccttctccttcctcttct 28896 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 27529 cttggtcttctccttcctcttctcc 27505
>emb|CR759870.6| Human DNA sequence from clone DADB-225M10 on chromosome 6, complete sequence Length = 57743 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 5744 cttggccttctccttcctcttct 5722 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 4355 cttggtcttctccttcctcttctcc 4331
>emb|CR788300.6| Human DNA sequence from clone DAAP-188P13 on chromosome 6, complete sequence Length = 78908 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 54303 cttggccttctccttcctcttct 54281 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 52914 cttggtcttctccttcctcttctcc 52890
>gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, complete sequence Length = 113268 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctcc 373 ||||||||||||||||||||||| Sbjct: 96683 ccttctccttcctcttctcctcc 96705
>gb|AC104306.2| Homo sapiens chromosome 3 clone RP11-524O15, complete sequence Length = 197110 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctcc 373 ||||||||||||||||||||||| Sbjct: 131049 ccttctccttcctcttctcctcc 131071
>ref|XM_703004.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 2 (LOC560828), mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccagt 376 ||||||||| ||||| ||||||||||||||| Sbjct: 598 cttggccttttcctttctcttctcctccagt 568
>ref|XM_680687.1| PREDICTED: Danio rerio similar to Ribosomal protein L13a, transcript variant 1 (LOC560828), mRNA Length = 774 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccagt 376 ||||||||| ||||| ||||||||||||||| Sbjct: 598 cttggccttttcctttctcttctcctccagt 568
>gb|AC006137.3|AC006137 Homo sapiens clone SCb-254N2 (UWGC:rg254N02) from 6p21, complete sequence Length = 129806 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 74304 cttggccttctccttcctcttct 74326 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 75693 cttggtcttctccttcctcttctcc 75717
>emb|BX927223.9| Human DNA sequence from clone DAMA-380P17 on chromosome 6, complete sequence Length = 83649 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 76920 cttggccttctccttcctcttct 76898 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 75531 cttggtcttctccttcctcttctcc 75507
>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 177428 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctcc 373 ||||||||||||||||||||||| Sbjct: 20024 ccttctccttcctcttctcctcc 20046
>emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 in linkage group 17, complete sequence Length = 166247 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccagt 376 ||||||||| ||||| ||||||||||||||| Sbjct: 20887 cttggccttttcctttctcttctcctccagt 20917
>emb|AL031983.2|HS271M21 Human DNA sequence from clone RP1-271M21 on chromosome 6p21.31-22.2 Contains a MAS1 oncogene pseudogene, the OR2H2 gene for olfactory receptor 2H2, olfactory receptor 2I1 and 2H5 pseudogenes OR2I1P and OR2H5P, the gene for diubiquitin, an RPL13A (60S Ribosomal Protein L13A) pseudogene, the GABBR1 gene for gamma-aminobutyric acid (GABA) B receptor 1 and an SMT3H1 or SMT3H2 (SMT3 (suppressor of mif two 3, yeast) homolog) pseudogene and three CpG islands, complete sequence Length = 134292 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttct 368 ||||||||||||||||||||||| Sbjct: 79300 cttggccttctccttcctcttct 79278 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcc 370 ||||| ||||||||||||||||||| Sbjct: 77911 cttggtcttctccttcctcttctcc 77887
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctcc 373 ||||||||||||||||||||||| Sbjct: 18616 ccttctccttcctcttctcctcc 18594
>emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in linkage group 17, complete sequence Length = 117015 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccagt 376 ||||||||| ||||| ||||||||||||||| Sbjct: 3384 cttggccttttcctttctcttctcctccagt 3354
>ref|NM_212784.1| Danio rerio ribosomal protein L13a (rpl13a), mRNA Length = 819 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccagt 376 ||||||||| ||||| ||||||||||||||| Sbjct: 604 cttggccttttcctttctcttctcctccagt 574
>gb|AF109186.1| Homo sapiens FWP004 mRNA, complete cds Length = 1247 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1083 cttggctttctctttcctcttctcctccag 1054
>ref|XM_520754.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC465300), mRNA Length = 680 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_512821.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456207), mRNA Length = 865 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 642 cttggctttctctttcctcttctcctccag 613
>ref|XM_512656.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC456029), mRNA Length = 570 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 415 cttggctttctctttcctcttctcctccag 386
>ref|XM_511050.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC454185), mRNA Length = 689 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>ref|XM_509803.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC452746), mRNA Length = 713 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 523 cttggctttctctttcctcttctcctccag 494
>gb|DQ216005.1| Taeniopygia guttata clone 0058P0011D10 ribosomal protein L13A-like mRNA, complete sequence Length = 798 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 350 gccttctccttcctcttctcctccag 375 ||||||||||||| |||||||||||| Sbjct: 529 gccttctccttccgcttctcctccag 504
>gb|DQ216004.1| Taeniopygia guttata clone 0058P0006F05 ribosomal protein L13A-like mRNA, complete sequence Length = 804 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 350 gccttctccttcctcttctcctccag 375 ||||||||||||| |||||||||||| Sbjct: 529 gccttctccttccgcttctcctccag 504
>gb|DQ216002.1| Taeniopygia guttata clone 0058P0010A09 ribosomal protein L13A-like mRNA, complete sequence Length = 739 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 350 gccttctccttcctcttctcctccag 375 ||||||||||||| |||||||||||| Sbjct: 469 gccttctccttccgcttctcctccag 444
>gb|DQ216000.1| Taeniopygia guttata clone 0058P0016A02 ribosomal protein L13A-like mRNA, complete sequence Length = 799 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 350 gccttctccttcctcttctcctccag 375 ||||||||||||| |||||||||||| Sbjct: 529 gccttctccttccgcttctcctccag 504
>ref|XM_527683.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC472308), mRNA Length = 612 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 495 cttggctttctctttcctcttctcctccag 466
>ref|NM_012423.2| Homo sapiens ribosomal protein L13a (RPL13A), mRNA Length = 1142 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>gb|BC070223.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88204 IMAGE:6736442), complete cds Length = 1153 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>gb|BC065236.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:70840 IMAGE:6161599), complete cds Length = 663 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 505 cttggctttctctttcctcttctcctccag 476
>gb|BC000514.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:8547 IMAGE:2822802), complete cds Length = 1125 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 500 cttggctttctctttcctcttctcctccag 471
>gb|AC145993.3| Pan troglodytes BAC clone RP43-178E21 from 7, complete sequence Length = 176561 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||| ||||||||||| |||| Sbjct: 93566 cttggccttctccgtcctcttctcccccag 93537
>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete sequence Length = 153555 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 352 cttctccttcctcttctcctccagtt 377 ||||||||||||| |||||||||||| Sbjct: 11844 cttctccttcctcctctcctccagtt 11869
>gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete sequence Length = 69847 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 352 cttctccttcctcttctcctccagtt 377 ||||||||||||| |||||||||||| Sbjct: 14148 cttctccttcctcctctcctccagtt 14173
>gb|AC146032.2| Pan troglodytes BAC clone RP43-14B10 from 7, complete sequence Length = 181694 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 29863 cttggctttctctttcctcttctcctccag 29892
>gb|BC013230.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3462928) Length = 658 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 493 cttggctttctctttcctcttctcctccag 464
>gb|AC025165.27| Homo sapiens 12 BAC RP11-571M6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211544 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| |||||||||| |||||||||||| Sbjct: 69055 cttggctttctccttccccttctcctccag 69026
>gb|BC004900.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:3545758), partial cds Length = 1119 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 491 cttggctttctctttcctcttctcctccag 462
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcct 371 |||||| ||||||||||||||||||| Sbjct: 58725 cttggctttctccttcctcttctcct 58700
>gb|AC142289.1| Pan troglodytes BAC clone RP43-179F19 from 7, complete sequence Length = 182617 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||| ||||||||||| |||| Sbjct: 57562 cttggccttctccgtcctcttctcccccag 57591
>gb|BC071921.1| Homo sapiens cDNA clone IMAGE:6423605, **** WARNING: chimeric clone **** Length = 1357 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1166 cttggctttctctttcctcttctcctccag 1137
>gb|BC021568.1| Homo sapiens cDNA clone IMAGE:3343061, **** WARNING: chimeric clone **** Length = 2530 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 2370 cttggctttctctttcctcttctcctccag 2341
>emb|AL358235.16| Human DNA sequence from clone RP11-196N24 on chromosome 10 Contains the 5' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)), the ribosomal protein L13a pseudogene 5 (RPL13AP5) and a CpG island, complete sequence Length = 106506 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 81362 cttggctttctctttcctcttctcctccag 81333
>emb|AL356120.10| Human DNA sequence from clone RP11-365K22 on chromosome 13 Contains a novel gene similar to ribosomal protein L13a (RPL13A), complete sequence Length = 83727 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 13284 cttggctttctctttcctcttctcctccag 13313
>emb|X56932.1|HS23KDHBP H.sapiens mRNA for 23 kD highly basic protein Length = 672 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 512 cttggctttctctttcctcttctcctccag 483
>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161577 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 131401 cttggctttctctttcctcttctcctccag 131430
>gb|AC026477.3| Homo sapiens chromosome 5 clone RP11-94D20, complete sequence Length = 70380 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 ||||||||||||||| |||||||| ||||| Sbjct: 48856 cttggccttctccttactcttctcttccag 48885
>gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, complete sequence Length = 185947 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 352 cttctccttcctcttctcctcc 373 |||||||||||||||||||||| Sbjct: 32339 cttctccttcctcttctcctcc 32318
>emb|CR859183.1| Pongo pygmaeus mRNA; cDNA DKFZp469O181 (from clone DKFZp469O181) Length = 772 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>gb|AC010811.20| Homo sapiens chromosome 11, clone RP11-3E17, complete sequence Length = 149205 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 ccttctccttcctcttctcctc 372 |||||||||||||||||||||| Sbjct: 9434 ccttctccttcctcttctcctc 9455
>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205952 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 95240 cttggctttctctttcctcttctcctccag 95211
>gb|AC182639.3| Pan troglodytes BAC clone CH251-322N11 from chromosome 7, complete sequence Length = 162580 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 352 cttctccttcctcttctcctccagtt 377 ||||||||||||| |||||||||||| Sbjct: 134495 cttctccttcctcctctcctccagtt 134520
>emb|CR624659.1| full-length cDNA clone CS0DI065YH07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1513 cttggctttctctttcctcttctcctccag 1484
>emb|CR625138.1| full-length cDNA clone CS0DI071YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1078 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR623949.1| full-length cDNA clone CS0DE014YH06 of Placenta of Homo sapiens (human) Length = 1036 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR622930.1| full-length cDNA clone CS0DE004YD03 of Placenta of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR622697.1| full-length cDNA clone CS0DL002YH12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>emb|CR622347.1| full-length cDNA clone CS0DI069YJ19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR622131.1| full-length cDNA clone CS0DI075YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1116 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>emb|CR619845.1| full-length cDNA clone CS0DI058YC16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR620187.1| full-length cDNA clone CS0DE001YC16 of Placenta of Homo sapiens (human) Length = 626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR618372.1| full-length cDNA clone CS0DD008YF03 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR618336.1| full-length cDNA clone CS0DC008YA18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1084 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR618182.1| full-length cDNA clone CS0DG002YE04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR616905.1| full-length cDNA clone CS0DI065YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR615101.1| full-length cDNA clone CS0DI074YD18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1099 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR613935.1| full-length cDNA clone CS0DJ010YF15 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR612270.1| full-length cDNA clone CS0DI068YN06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1048 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR613016.1| full-length cDNA clone CS0DI065YK06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR607854.1| full-length cDNA clone CS0DI035YD15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 649 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>emb|CR607799.1| full-length cDNA clone CS0DI067YC06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR608676.1| full-length cDNA clone CS0CAP006YO09 of Thymus of Homo sapiens (human) Length = 628 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR607407.1| full-length cDNA clone CS0DI008YJ20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1088 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR607352.1| full-length cDNA clone CS0DF034YJ13 of Fetal brain of Homo sapiens (human) Length = 1088 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR606179.1| full-length cDNA clone CS0DM013YA03 of Fetal liver of Homo sapiens (human) Length = 626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>dbj|AK091555.1| Homo sapiens cDNA FLJ34236 fis, clone FCBBF3027199, weakly similar to ANKYRIN Length = 2707 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 2565 cttggctttctctttcctcttctcctccag 2536
>emb|CR603453.1| full-length cDNA clone CS0DB008YK16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1083 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 473 cttggctttctctttcctcttctcctccag 444
>emb|CR601809.1| full-length cDNA clone CS0DA009YL03 of Neuroblastoma of Homo sapiens (human) Length = 851 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 241 cttggctttctctttcctcttctcctccag 212
>emb|CR599383.1| full-length cDNA clone CS0DM006YN06 of Fetal liver of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>dbj|AK056837.1| Homo sapiens cDNA FLJ32275 fis, clone PROST2000053, moderately similar to 60S RIBOSOMAL PROTEIN L13A Length = 2315 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1708 cttggctttctctttcctcttctcctccag 1679
>emb|CR596607.1| full-length cDNA clone CS0DI029YH03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 481 cttggctttctctttcctcttctcctccag 452
>emb|CR595200.1| full-length cDNA clone CS0DI035YJ24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 78688 cttggctttctctttcctcttctcctccag 78659
>emb|CR592554.1| full-length cDNA clone CS0DC029YN07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR591518.1| full-length cDNA clone CS0DB008YJ02 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1069 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>emb|CR591301.1| full-length cDNA clone CS0DL008YK19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1093 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 483 cttggctttctctttcctcttctcctccag 454
>gb|AC087279.10| Homo sapiens chromosome 11, clone RP11-559I10, complete sequence Length = 184523 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcctc 372 |||||||||||||||||||||| Sbjct: 48352 ccttctccttcctcttctcctc 48331
>ref|XR_000921.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNA Length = 590 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 431 cttggctttctctttcctcttctcctccag 402
>ref|XR_000922.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 2 (LOC387930), misc RNA Length = 688 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 520 cttggctttctctttcctcttctcctccag 491
>ref|XR_000923.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 3 (LOC387930), misc RNA Length = 605 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 446 cttggctttctctttcctcttctcctccag 417
>ref|XM_945533.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC649564), mRNA Length = 1112 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 497 cttggctttctctttcctcttctcctccag 468
>ref|XM_945532.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC649564), mRNA Length = 671 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_945529.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC649564), mRNA Length = 681 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_945527.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC649564), mRNA Length = 688 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_945523.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC649564), mRNA Length = 1052 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 437 cttggctttctctttcctcttctcctccag 408
>ref|XM_945522.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC649564), mRNA Length = 1134 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_941896.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC649564), mRNA Length = 668 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>ref|XM_945517.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC649564), mRNA Length = 1067 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 452 cttggctttctctttcctcttctcctccag 423
>ref|XM_931056.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC284821), mRNA Length = 1132 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_931051.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC284821), mRNA Length = 679 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_931046.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC284821), mRNA Length = 1050 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 435 cttggctttctctttcctcttctcctccag 406
>ref|XM_931040.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC284821), mRNA Length = 1067 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 452 cttggctttctctttcctcttctcctccag 423
>ref|XM_926157.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC284821), mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 516 cttggctttctctttcctcttctcctccag 487
>ref|XM_942899.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC642209), mRNA Length = 590 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 431 cttggctttctctttcctcttctcctccag 402
>ref|XM_936630.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC642209), mRNA Length = 688 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 520 cttggctttctctttcctcttctcctccag 491
>ref|XM_942891.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC642209), mRNA Length = 605 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 446 cttggctttctctttcctcttctcctccag 417
>ref|XM_945137.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 14 (LOC387841), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 511 cttggctttctctttcctcttctcctccag 482
>ref|XM_945135.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 13 (LOC387841), mRNA Length = 1053 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_945132.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 12 (LOC387841), mRNA Length = 1054 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>ref|XM_945129.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 11 (LOC387841), mRNA Length = 1831 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1295 cttggctttctctttcctcttctcctccag 1266
>ref|XM_941323.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 8 (LOC387841), mRNA Length = 1899 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1363 cttggctttctctttcctcttctcctccag 1334
>ref|XM_945122.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 10 (LOC387841), mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1297 cttggctttctctttcctcttctcctccag 1268
>ref|XM_945118.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 9 (LOC387841), mRNA Length = 694 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 158 cttggctttctctttcctcttctcctccag 129
>ref|XM_944672.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648462), mRNA Length = 1590 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1455 cttggctttctctttcctcttctcctccag 1426
>ref|XM_944670.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648462), mRNA Length = 1547 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1380 cttggctttctctttcctcttctcctccag 1351
>ref|XM_940589.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648462), mRNA Length = 1642 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1455 cttggctttctctttcctcttctcctccag 1426
>ref|XM_944666.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648462), mRNA Length = 1542 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1389 cttggctttctctttcctcttctcctccag 1360
>ref|XM_933780.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC441632), mRNA Length = 1589 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1454 cttggctttctctttcctcttctcctccag 1425
>ref|XM_497335.2| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC441632), mRNA Length = 1546 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1379 cttggctttctctttcctcttctcctccag 1350
>ref|XM_929566.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC441632), mRNA Length = 1641 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1454 cttggctttctctttcctcttctcctccag 1425
>ref|XM_933775.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA Length = 1541 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1388 cttggctttctctttcctcttctcctccag 1359
>ref|XM_932701.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 7 (LOC387841), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 511 cttggctttctctttcctcttctcctccag 482
>ref|XM_932698.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 6 (LOC387841), mRNA Length = 1053 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 517 cttggctttctctttcctcttctcctccag 488
>ref|XM_932693.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC387841), mRNA Length = 1054 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>ref|XM_932689.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC387841), mRNA Length = 1831 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1295 cttggctttctctttcctcttctcctccag 1266
>ref|XM_370681.3| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC387841), mRNA Length = 1899 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1363 cttggctttctctttcctcttctcctccag 1334
>ref|XM_932682.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC387841), mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 1297 cttggctttctctttcctcttctcctccag 1268
>ref|XM_932678.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC387841), mRNA Length = 694 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 158 cttggctttctctttcctcttctcctccag 129
>ref|XM_944191.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC648326), mRNA Length = 703 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_944188.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC648326), mRNA Length = 622 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 438 cttggctttctctttcctcttctcctccag 409
>ref|XM_944185.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC648326), mRNA Length = 595 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 411 cttggctttctctttcctcttctcctccag 382
>ref|XM_944181.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC648326), mRNA Length = 626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 447 cttggctttctctttcctcttctcctccag 418
>ref|XM_939484.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC648326), mRNA Length = 711 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 527 cttggctttctctttcctcttctcctccag 498
>ref|XM_932924.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 5 (LOC283340), mRNA Length = 700 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 519 cttggctttctctttcctcttctcctccag 490
>ref|XM_932919.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA Length = 590 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 411 cttggctttctctttcctcttctcctccag 382
>ref|XM_932916.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC283340), mRNA Length = 610 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 431 cttggctttctctttcctcttctcctccag 402
>ref|XM_208072.6| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 1 (LOC283340), mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 527 cttggctttctctttcctcttctcctccag 498
>ref|XM_932910.1| PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC283340), mRNA Length = 626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 447 cttggctttctctttcctcttctcctccag 418
>dbj|AK222747.1| Homo sapiens mRNA for ribosomal protein L13a variant, clone: DMC05308 Length = 630 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 497 cttggctttctctttcctcttctcctccag 468
>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer Institute Human Bac Library) complete sequence Length = 162200 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 94098 cttggctttctctttcctcttctcctccag 94127
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 11206 cttggctttctctttcctcttctcctccag 11177
>dbj|AK130605.1| Homo sapiens cDNA FLJ27095 fis, clone SPL04438, highly similar to 60S ribosomal protein L13A Length = 1125 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 518 cttggctttctctttcctcttctcctccag 489
>gb|BC062537.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:71249 IMAGE:4908022), complete cds Length = 1122 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 497 cttggctttctctttcctcttctcctccag 468
>gb|BC071929.1| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:88614 IMAGE:5808487), complete cds Length = 1126 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 501 cttggctttctctttcctcttctcctccag 472
>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 108362 cttggctttctctttcctcttctcctccag 108333
>gb|AC102173.15| Mus musculus chromosome 18, clone RP23-472D7, complete sequence Length = 185768 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 352 cttctccttcctcttctcctcc 373 |||||||||||||||||||||| Sbjct: 166636 cttctccttcctcttctcctcc 166615
>dbj|AB082924.1| Homo sapiens RPL13a mRNA for ribosomal protein L13a, complete cds Length = 974 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 350 cttggctttctctttcctcttctcctccag 321
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcct 371 |||||| ||||||||||||||||||| Sbjct: 90580 cttggctttctccttcctcttctcct 90555
>gb|BC032107.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone IMAGE:4644246) Length = 1139 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 506 cttggctttctctttcctcttctcctccag 477
>gb|BC001836.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:4241 IMAGE:2961667), complete cds Length = 694 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 498 cttggctttctctttcctcttctcctccag 469
>gb|BC001675.2| Homo sapiens ribosomal protein L13a, mRNA (cDNA clone MGC:2546 IMAGE:2961667), complete cds Length = 694 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 498 cttggctttctctttcctcttctcctccag 469
>gb|L35446.1|NOYPRP1A Notoryctes typhlops protamine P1 gene, complete cds Length = 689 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 352 cttctccttcctcttctcctcc 373 |||||||||||||||||||||| Sbjct: 200 cttctccttcctcttctcctcc 179
>gb|AC090939.2| Homo sapiens chromosome 3 clone RP11-127I14 map 3p, complete sequence Length = 161366 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 352 cttctccttcctcttctcctcc 373 |||||||||||||||||||||| Sbjct: 71243 cttctccttcctcttctcctcc 71264
>dbj|AP001340.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B2289H10, LL56-APP region, complete sequence Length = 58771 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 45171 cttggctttctctttcctcttctcctccag 45142
>dbj|AB028893.1| Homo sapiens RPL13A, U32, U33, U34, U35, RPS11, U35 genes for ribosomal protein L13a and S11, U32, U33, U34, U35, and U35 snoRNA, complete cds and sequence Length = 13208 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 346 cttggccttctccttcctcttctcctccag 375 |||||| ||||| ||||||||||||||||| Sbjct: 4698 cttggctttctctttcctcttctcctccag 4669
>ref|XM_508036.1| PREDICTED: Pan troglodytes similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein (LOC450737), mRNA Length = 660 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 347 ttggccttctccttcctcttctcctccag 375 ||||| ||||| ||||||||||||||||| Sbjct: 521 ttggctttctctttcctcttctcctccag 493
>ref|XM_519229.1| PREDICTED: Pan troglodytes similar to superfast myosin heavy chain (LOC463567), mRNA Length = 7101 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 tcttctcctccagttccttga 383 ||||||||||||||||||||| Sbjct: 2629 tcttctcctccagttccttga 2609
>ref|NR_002147.2| Homo sapiens myosin, heavy polypeptide 16 (MYH16) on chromosome 7 Length = 2282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 tcttctcctccagttccttga 383 ||||||||||||||||||||| Sbjct: 247 tcttctcctccagttccttga 227
>gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, complete sequence Length = 211115 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ttctccttcctcttctcctcc 373 ||||||||||||||||||||| Sbjct: 36647 ttctccttcctcttctcctcc 36667
>gb|AC113508.14| Mus musculus chromosome 13, clone RP23-376D8, complete sequence Length = 176600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ctccttcctcttctcctccag 375 ||||||||||||||||||||| Sbjct: 25998 ctccttcctcttctcctccag 25978
>gb|AC144933.4| Mus musculus BAC clone RP24-531B24 from chromosome 8, complete sequence Length = 169667 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 ccttctccttcctcttctcct 371 ||||||||||||||||||||| Sbjct: 4746 ccttctccttcctcttctcct 4726 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,159,057 Number of Sequences: 3902068 Number of extensions: 4159057 Number of successful extensions: 118686 Number of sequences better than 10.0: 459 Number of HSP's better than 10.0 without gapping: 459 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117461 Number of HSP's gapped (non-prelim): 1217 length of query: 509 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 487 effective length of database: 17,147,199,772 effective search space: 8350686288964 effective search space used: 8350686288964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
