>SRP40_YEAST (P32583) Suppressor protein SRP40|
          Length = 406

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = -3

Query: 502 SAEETHEENDKPRSKEPXXXXXXXXXXXKSHTSTMDSDASSVDEAPAGDGSMLKNLISQD 323
           S  E+  E+D   S               S  S+ DSD+SS   + + D     +  S  
Sbjct: 185 SDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDS 244

Query: 322 DSAGSSYKASRSFS 281
           DS+GSS  +S S S
Sbjct: 245 DSSGSSDSSSSSDS 258

>CHSG_PETHY (P22927) Chalcone synthase G (EC 2.3.1.74) (Naringenin-chalcone|
           synthase G)
          Length = 393

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 28/89 (31%), Positives = 39/89 (43%)
 Frame = -1

Query: 510 MQSQPRRHMKKTTSLEAKNRKASGNC*NLGRRAILQQWIPMRHRSTKPLQEMVRC*KTSF 331
           +++ P     K  SL A+   A      LG+RA  Q+ I    +S   +  +V C  TS 
Sbjct: 77  LKNNPNICEHKAPSLNARQEIAVAEAPKLGKRAA-QKAIEEWSQSKSKITHLVFCTTTSV 135

Query: 330 HKTTPRALLTKLLGPSPCWRRSARTRSSC 244
                   LTKLLG SP  +RS   +  C
Sbjct: 136 ELPGADYQLTKLLGLSPSVKRSMMYQQGC 164

>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation|
           protein 2C (EC 1.14.11.-) (Jumonji domain-containing
           protein 1C) (Thyroid receptor-interacting protein 8)
           (TRIP-8)
          Length = 2540

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 443 QETAEIWEEEPYFNNGFRCVIGRRSPCRRWFDAEKPHFTRRLRGLFLQSFSVLLPAGAVP 264
           Q+  EI+ + PY  NG+R  + R+    +WF     H     R + + +  VL P    P
Sbjct: 176 QKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDP 235

>NCOA3_HUMAN (Q9Y6Q9) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)|
           (Thyroid hormone receptor activator molecule 1) (TRAM-1)
           (ACTR) (Receptor-associated coactivator 3) (RAC-3)
           (Amplified in breast cancer-1 protein) (AIB-1) (Steroid
           receptor coacti
          Length = 1424

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/87 (25%), Positives = 40/87 (45%)
 Frame = +3

Query: 138 VCTRNHQTKLSQSTPNQASLINNKNSTKKILTSHHSTMTLFLRNGASREKDREAL*EEPA 317
           +C  N +  LS     ++S+   +N    + +  H  + L L   +S ++   +L   P 
Sbjct: 584 MCQSNSRDHLSDKESKESSVEGAENQRGPLESKGHKKL-LQLLTCSSDDRGHSSLTNSPL 642

Query: 318 ESSCEMRFFSIEPSPAGASSTDDASES 398
           +SSC+    S+  SP+G SS+     S
Sbjct: 643 DSSCKESSVSV-TSPSGVSSSTSGGVS 668

>EDN1_RABIT (P29560) Endothelin-1 precursor (ET-1) (Preproendothelin-1) (PPET1)|
          Length = 202

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -1

Query: 483 KKTTSLEAKNRKASGNC*NLGRRAILQQWIPMRHRSTKPLQEMVRC*KTSFHKTTPRALL 304
           ++T      N K   +C  LG++ ILQ+   M+ R  + L+ +    KTSFH    RA L
Sbjct: 133 QETMEKGRNNLKKGKDCSKLGKKCILQKL--MQGRKIRRLEAISNSIKTSFHAAQLRAQL 190

>K0971_RAT (Q5M7V7) Protein KIAA0971 homolog|
          Length = 679

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -1

Query: 342 KTSFHKTTPRALLTKLLGPSPC-WRRSARTRSSCCDVM*GFS 220
           KT+FH T+   +LTK + P+P  +++ A+  +S  DV+  FS
Sbjct: 119 KTNFHHTSTEDVLTKKMRPTPVNYKKLAQECNSLSDVLDTFS 160

>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragment)|
          Length = 373

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = -3

Query: 514 AYAVSAEETHEENDKPRSKEPXXXXXXXXXXXKSHTSTMDSDASSVDEAPAGDGSMLKNL 335
           +Y+V  +E+ EEND   S               S TST  S +SS+  +     S  K  
Sbjct: 94  SYSVYVDES-EENDDDSSSAQSSHSSTDDATSTSSTSTTSSSSSSLSSSSTSSSS--KQS 150

Query: 334 ISQDDSAGSSYKASRSFSLLA 272
            S   S  SS  +S + S L+
Sbjct: 151 SSPQSSTMSSTDSSPTSSSLS 171

>CCNT2_HUMAN (O60583) Cyclin-T2|
          Length = 730

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +3

Query: 144 TRNHQTKLSQSTPNQASLINNKNSTKKILTSHHS 245
           + NH +K+S+S+ +  S  ++ +S K+ ++SH+S
Sbjct: 627 SHNHHSKMSKSSKSSGSSSSSSSSVKQYISSHNS 660

>GAS5_YEAST (Q08193) Glycolipid-anchored surface protein 5 precursor|
          Length = 484

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = -3

Query: 496 EETHEENDKPRSKEPXXXXXXXXXXXKSHTSTMDSDASSVDEAPAGDGSMLKNLISQDDS 317
           ++  EE+D   S               S +S+  S ASS     A + S+LK+  S   S
Sbjct: 395 DDDDEEDDDTSSSSSSSSSSSSSASSSSESSSSTSKASS-SSPSASETSLLKSAASATSS 453

Query: 316 AGSSYKASRSFSLL 275
           + SS K+  +  ++
Sbjct: 454 SQSSSKSKGAAGII 467

>KRUP_DROME (P07247) Protein krueppel|
          Length = 502

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -3

Query: 553 RAESVRA--RVPEPTAYAVSAEETHEENDKPRSKEPXXXXXXXXXXXKSHTSTMDSDASS 380
           +A+ +R   R+P P       +  H  +D P   EP            SH  T D D   
Sbjct: 436 KAQDIRRVFRLPPP-------QIPHVPSDMPEQTEPEDLSMHSPRSIGSHEQTDDIDLYD 488

Query: 379 VDEAPA 362
           +D+APA
Sbjct: 489 LDDAPA 494


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,790,186
Number of Sequences: 219361
Number of extensions: 1381171
Number of successful extensions: 4024
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4021
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)