>dbj|AK100706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115B06, full
            insert sequence
          Length = 4301

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 155/193 (80%), Gaps = 6/193 (3%)
 Strand = Plus / Minus

                                                                        
Query: 262  tgcggaacggcgccagcagggagaaggaccgagaagctttgtaagaagagcccgcggagt 321
            |||||||||| | ||| |||||||| ||||||||||||||  | ||||| || |   |||
Sbjct: 4018 tgcggaacggtgacagtagggagaacgaccgagaagctttagatgaagaaccag---agt 3962

                                                                        
Query: 322  cgtcttgtgaaatgaggtttttcagcatcgaaccatctcctgcaggggcttcgtcgaccg 381
            | ||| | ||||||||| |||||||||| || || ||||| ||   |||| |||| || |
Sbjct: 3961 catctcgcgaaatgagggttttcagcattgacccgtctccggctaaggctccgtcaacag 3902

                                                                        
Query: 382  atgacgcatcggaatccattgt---tgaagtatggctcttcttcccaaatttcagcagtt 438
            |||| ||||| |||||||||||   ||| || ||||||||| | ||||| ||||  ||||
Sbjct: 3901 atgatgcatcagaatccattgtacctgatgtgtggctcttcctaccaaacttcaaaagtt 3842

                         
Query: 439  tcctgaagccttt 451
            |||||||||||||
Sbjct: 3841 tcctgaagccttt 3829

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 72/87 (82%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                            
Query: 368      ggcttcgtcgaccgatgacgcatcggaatccattgt---tgaagtatggctcttcttccc 424
                |||| |||| || ||||| ||||| |||||||||||   ||| || ||||||||| | ||
Sbjct: 36052007 ggctccgtcaacagatgatgcatcagaatccattgtacctgatgtgtggctcttcctacc 36051948

                                           
Query: 425      aaatttcagcagtttcctgaagccttt 451
                ||| ||||  |||||||||||||||||
Sbjct: 36051947 aaacttcaaaagtttcctgaagccttt 36051921



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 262      tgcggaacggcgccagcagggagaaggaccgagaagct 299
                |||||||||| | ||| |||||||| ||||||||||||
Sbjct: 36054413 tgcggaacggtgacagtagggagaacgaccgagaagct 36054376

>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
              sequence
          Length = 164179

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 72/87 (82%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                          
Query: 368    ggcttcgtcgaccgatgacgcatcggaatccattgt---tgaagtatggctcttcttccc 424
              |||| |||| || ||||| ||||| |||||||||||   ||| || ||||||||| | ||
Sbjct: 113518 ggctccgtcaacagatgatgcatcagaatccattgtacctgatgtgtggctcttcctacc 113459

                                         
Query: 425    aaatttcagcagtttcctgaagccttt 451
              ||| ||||  |||||||||||||||||
Sbjct: 113458 aaacttcaaaagtttcctgaagccttt 113432



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 262    tgcggaacggcgccagcagggagaaggaccgagaagct 299
              |||||||||| | ||| |||||||| ||||||||||||
Sbjct: 115924 tgcggaacggtgacagtagggagaacgaccgagaagct 115887

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 72/87 (82%), Gaps = 3/87 (3%)
 Strand = Plus / Minus

                                                                            
Query: 368      ggcttcgtcgaccgatgacgcatcggaatccattgt---tgaagtatggctcttcttccc 424
                |||| |||| || ||||| ||||| |||||||||||   ||| || ||||||||| | ||
Sbjct: 36142081 ggctccgtcaacagatgatgcatcagaatccattgtacctgatgtgtggctcttcctacc 36142022

                                           
Query: 425      aaatttcagcagtttcctgaagccttt 451
                ||| ||||  |||||||||||||||||
Sbjct: 36142021 aaacttcaaaagtttcctgaagccttt 36141995



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 262      tgcggaacggcgccagcagggagaaggaccgagaagct 299
                |||||||||| | ||| |||||||| ||||||||||||
Sbjct: 36144487 tgcggaacggtgacagtagggagaacgaccgagaagct 36144450

>ref|XM_470513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3810

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 262  tgcggaacggcgccagcagggagaaggaccgagaagcttt 301
            |||||||||| | ||| |||||||| ||||||||||||||
Sbjct: 3787 tgcggaacggtgacagtagggagaacgaccgagaagcttt 3748



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 411  tggctcttcttcccaaatttcagcagtttcctgaagccttt 451
            ||||||||| | ||||| ||||  |||||||||||||||||
Sbjct: 3632 tggctcttcctaccaaacttcaaaagtttcctgaagccttt 3592

>gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosome 16, complete
             sequence
          Length = 189557

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 200   caacaacaaaaatagtaccaagaaa 224
             ||||||||||||||||| |||||||
Sbjct: 39876 caacaacaaaaatagtaacaagaaa 39852

>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence
          Length = 214268

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 200   caacaacaaaaatagtaccaagaaa 224
             ||||||||||||||||| |||||||
Sbjct: 19076 caacaacaaaaatagtaacaagaaa 19100

>emb|AL450997.5| Human DNA sequence from clone RP5-1086I18 on chromosome 1 Contains part
             of the KCND3 gene for potassium voltage-gated channel
             Shal-related subfamily member 3 and a novel gene, complete
             sequence
          Length = 126692

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 419   cttcccaaatttcagcagttt 439
             |||||||||||||||||||||
Sbjct: 78752 cttcccaaatttcagcagttt 78732

>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 182    caatcaagccagcctcatcaa 202
              |||||||||||||||||||||
Sbjct: 122482 caatcaagccagcctcatcaa 122502

>gb|AC027672.12| Homo sapiens chromosome 10 clone RP11-198M6, complete sequence
          Length = 187229

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 236   acatcacagcacgatgacctt 256
             |||||||||||||||||||||
Sbjct: 82832 acatcacagcacgatgacctt 82852

>gb|AC006228.5|AC006228 Genomic sequence for Arabidopsis thaliana BAC F5J5, complete sequence
          Length = 104806

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   acaacaaaaatagtaccaaga 222
             |||||||||||||||||||||
Sbjct: 86347 acaacaaaaatagtaccaaga 86367

>gb|AF116723.1| Homo sapiens MSTP053 mRNA, complete cds
          Length = 4671

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 236  acatcacagcacgatgacctt 256
            |||||||||||||||||||||
Sbjct: 3195 acatcacagcacgatgacctt 3175

>emb|AL772276.15| Mouse DNA sequence from clone RP23-335F19 on chromosome 4, complete
             sequence
          Length = 192682

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   aagaaaatcctcacatcacat 239
             |||||||||||||||||||||
Sbjct: 97226 aagaaaatcctcacatcacat 97206

>emb|AL935142.8| Zebrafish DNA sequence from clone CH211-227M23, complete sequence
          Length = 160780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   tacaaacaacacaacacaagc 85
            |||||||||||||||||||||
Sbjct: 6002 tacaaacaacacaacacaagc 5982

>gb|AC099624.6| Mus musculus chromosome 15, clone RP24-404E2, complete sequence
          Length = 173877

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   aaaaatagtaccaagaaaat 226
             ||||||||||||||||||||
Sbjct: 44621 aaaaatagtaccaagaaaat 44640

>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence
          Length = 205463

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   aatcctcacatcacatcaca 243
             ||||||||||||||||||||
Sbjct: 96816 aatcctcacatcacatcaca 96797

>gb|AC127591.4| Mus musculus BAC clone RP23-315I14 from chromosome 15, complete sequence
          Length = 182619

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    aaaaatagtaccaagaaaat 226
              ||||||||||||||||||||
Sbjct: 158900 aaaaatagtaccaagaaaat 158881

>emb|AL359180.17| Human DNA sequence from clone RP11-320G21 on chromosome 13, complete
             sequence
          Length = 159229

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   cctcatcaacaacaaaaata 213
             ||||||||||||||||||||
Sbjct: 31847 cctcatcaacaacaaaaata 31866

>emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032B23,
             complete sequence
          Length = 120640

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   caaaaatagtaccaagaaaa 225
             ||||||||||||||||||||
Sbjct: 52412 caaaaatagtaccaagaaaa 52431

>emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on chromosome 11, complete
              sequence
          Length = 222359

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    catcaacaacaaaaatagta 216
              ||||||||||||||||||||
Sbjct: 199717 catcaacaacaaaaatagta 199736

>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190237

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    aatcctcacatcacatcaca 243
              ||||||||||||||||||||
Sbjct: 186580 aatcctcacatcacatcaca 186599

>gb|AC123983.8| Pan troglodytes clone rp43-42n4, complete sequence
          Length = 187806

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    gttttcttcatgtgtctcct 495
              ||||||||||||||||||||
Sbjct: 103798 gttttcttcatgtgtctcct 103779

>gb|AF213680.2|AF213680 Actinobacillus actinomycetemcomitans serotype f-specific polysaccharide
             antigen gene cluster, complete sequence
          Length = 13116

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   caaaaatagtaccaagaaaa 225
             ||||||||||||||||||||
Sbjct: 12597 caaaaatagtaccaagaaaa 12578

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 206     caaaaatagtaccaagaaaa 225
               ||||||||||||||||||||
Sbjct: 9957462 caaaaatagtaccaagaaaa 9957481

>dbj|AK072371.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M18, full
            insert sequence
          Length = 4054

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  caaaaatagtaccaagaaaa 225
            ||||||||||||||||||||
Sbjct: 3186 caaaaatagtaccaagaaaa 3167

>emb|CR762486.12| Zebrafish DNA sequence from clone DKEY-264O9 in linkage group 3,
            complete sequence
          Length = 82649

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 35   aatacantgtaaaggattacaca 57
            |||||| ||||||||||||||||
Sbjct: 4931 aatacattgtaaaggattacaca 4953

>dbj|AP003049.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-10A7, complete
            sequence
          Length = 117001

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  aaatagtaccaagaaaatcc 228
            ||||||||||||||||||||
Sbjct: 2297 aaatagtaccaagaaaatcc 2316

>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     catcaacaacaaaaatagta 216
               ||||||||||||||||||||
Sbjct: 1379535 catcaacaacaaaaatagta 1379516

>gb|AC133194.3| Mus musculus BAC clone RP23-403H14 from 3, complete sequence
          Length = 205323

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ttttcttcatgtgtctcctc 496
             ||||||||||||||||||||
Sbjct: 37217 ttttcttcatgtgtctcctc 37198

>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete
             sequence
          Length = 150285

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tacaaacaacacaacacaag 84
             ||||||||||||||||||||
Sbjct: 57496 tacaaacaacacaacacaag 57515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,697,095
Number of Sequences: 3902068
Number of extensions: 4697095
Number of successful extensions: 102726
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102613
Number of HSP's gapped (non-prelim): 109
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)