>DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)|
           (Mitochondrial DEAD box protein 28)
          Length = 540

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 479 RWRHSPAATTSMTAQNSGEQHFGCSGISIEKPALRE-SSRG 598
           RW  +P A+     + S + HF    +  E PALR  SSRG
Sbjct: 86  RWERAPLASRGWKHRRSRQDHFSIERVQQEAPALRNLSSRG 126

>ELK3_HUMAN (P41970) ETS domain-containing protein Elk-3 (ETS-related protein|
           NET) (ETS-related protein ERP) (SRF accessory protein 2)
           (SAP-2)
          Length = 407

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 23/71 (32%), Positives = 37/71 (52%)
 Frame = -3

Query: 439 ASSSVVRRRMPSTALRASSAAEVDSNLRVEAHCHDSNLCEPFF*SAFSRVKETSWMKSMI 260
           +S+S    R PS + ++   +E  S L +EA CHDS+  EP   S+ S+ K  S      
Sbjct: 234 SSASPFSSRSPSLSPKSPLPSEHRS-LFLEAACHDSDSLEPLNLSSGSKTKSPSLPPK-- 290

Query: 259 ASPMPRGVPVS 227
            +  P+G+ +S
Sbjct: 291 -AKKPKGLEIS 300

>HIS4_MYCLE (Q9CC56) Phosphoribosyl isomerase A|
           (1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase) (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase) (N-(5'-phosphoribo
          Length = 244

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 406 TASCDEPHWKRHAGALTREVLQL-MEVEALAGGHHI------DDSSKLRRAAFRVQRDLD 564
           TA+C+ PHW     A   + + + ++V+ + G H +       D   L    + V  +LD
Sbjct: 104 TAACENPHWCAQVIAEHGDKIAVGLDVQIVDGQHRLRGRGWETDGGDL----WDVLENLD 159

Query: 565 REACTQRILARVRRD 609
           R+ C++ I+  V +D
Sbjct: 160 RQGCSRFIVTDVTKD 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,298,807
Number of Sequences: 219361
Number of extensions: 1932629
Number of successful extensions: 4952
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4952
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)