| Clone Name | rbags12o19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MUTS_PROMM (Q7V978) DNA mismatch repair protein mutS | 30 | 5.8 | 2 | MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domai... | 30 | 7.6 | 3 | MB21_ARATH (O80998) Myrosinase-binding protein-like At2g25980 | 29 | 10.0 |
|---|
>MUTS_PROMM (Q7V978) DNA mismatch repair protein mutS| Length = 927 Score = 30.0 bits (66), Expect = 5.8 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = +1 Query: 313 DMKHRQTFLHFGKGRKLTDRTTIQMGTAIYISVNLGMIIGE--ASEFTDRTTTAFHFHNL 486 +M LH R L I GTA + +++ + E A++ RT A H+H L Sbjct: 784 EMAETANILHHASDRSLVLLDEIGRGTATFDGLSIAWAVSEHLATDLRSRTVFATHYHEL 843
>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor| (EGF-like domain-containing protein 3) (Multiple EGF-like domain protein 3) Length = 1229 Score = 29.6 bits (65), Expect = 7.6 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%) Frame = -3 Query: 329 CRCFIS*VGSARSSGC---LYGPGRENACTCL 243 CRC GS GC YGPG E C CL Sbjct: 956 CRCPPGFTGSGCEQGCPPGRYGPGCEQLCGCL 987
>MB21_ARATH (O80998) Myrosinase-binding protein-like At2g25980| Length = 449 Score = 29.3 bits (64), Expect = 10.0 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 277 YKQPLDRADPTYDMKHRQTFLHFGKGRKL 363 +K DR PTY K +TF+ KGR L Sbjct: 246 FKTSKDRTSPTYGRKSERTFVFESKGRAL 274 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,798,461 Number of Sequences: 219361 Number of extensions: 1849551 Number of successful extensions: 3502 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3434 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3501 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)