ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13d16 |
|---|---|
| Clone Library Name | barley_pub |
>PCY2_MOUSE (Q922E4) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 105 bits (261), Expect = 2e-22 Identities = 52/127 (40%), Positives = 78/127 (61%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +H DQ ++ +G + PIMNLHER+LSVLACRYV EV+IGAP+ ++ +++ F + LV HG Sbjct: 267 LHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLNHFKVDLVCHG 326 Query: 486 TIAENMDYTEDDSNPYAVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEAS 307 D D S+PY P GI+++++S D I+ N Y+ RN+KKEA Sbjct: 327 KTEIVPD--RDGSDPYQEPKRRGIFYQIDSGSDLTTDLIVQRIIKNRLEYEARNQKKEAK 384 Query: 306 EKKYYDS 286 E + ++ Sbjct: 385 ELAFLEA 391 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/87 (29%), Positives = 42/87 (48%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +HTD+ I+ +GP P+ ER V A ++VDEV+ AP+ + + + N VHG Sbjct: 56 VHTDEEIAKHKGP--PVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHG 113 Query: 486 TIAENMDYTEDDSNPYAVPVAMGIYHK 406 ++ T D + Y G Y + Sbjct: 114 ---NDITLTVDGRDTYEEVKQAGRYRE 137
>PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 103 bits (256), Expect = 6e-22 Identities = 52/127 (40%), Positives = 77/127 (60%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +H DQ ++ +G + PIMNLHER+LSVLACRYV EV+IGAP+ ++ +++ F + LV HG Sbjct: 267 LHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLNHFKVDLVCHG 326 Query: 486 TIAENMDYTEDDSNPYAVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEAS 307 D D S+PY P GI+ +++S D I+ N Y+ RN+KKEA Sbjct: 327 KTEIVPD--RDGSDPYEEPKRRGIFCQIDSGSDLTTDLIVQRIIKNRLEYEARNQKKEAK 384 Query: 306 EKKYYDS 286 E + ++ Sbjct: 385 ELAFLEA 391 Score = 43.1 bits (100), Expect = 7e-04 Identities = 26/87 (29%), Positives = 42/87 (48%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +HTD+ I+ +GP P+ ER V A ++VDEV+ AP+ + + + N VHG Sbjct: 56 VHTDEEIAKHKGP--PVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHG 113 Query: 486 TIAENMDYTEDDSNPYAVPVAMGIYHK 406 ++ T D + Y G Y + Sbjct: 114 ---NDITLTVDGRDTYEEVKQAGRYRE 137
>PCY2_HUMAN (Q99447) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 389 Score = 102 bits (255), Expect = 8e-22 Identities = 51/127 (40%), Positives = 79/127 (62%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +H DQ ++ +G + PIMNLHER+LSVLACRYV EV+IGAP+ ++ ++++ F + LV HG Sbjct: 249 LHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHG 308 Query: 486 TIAENMDYTEDDSNPYAVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEAS 307 D D S+PY P GI+ +++S + I++N Y+ RN+KKEA Sbjct: 309 KTEIIPD--RDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEYEARNQKKEAK 366 Query: 306 EKKYYDS 286 E + ++ Sbjct: 367 ELAFLEA 373 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/87 (29%), Positives = 43/87 (49%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +HTD+ I+ +GP P+ ER V A ++VDEV+ AP+ + + + +N VHG Sbjct: 56 VHTDEEIAKHKGP--PVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHG 113 Query: 486 TIAENMDYTEDDSNPYAVPVAMGIYHK 406 ++ T D + Y G Y + Sbjct: 114 ---NDITLTVDGRDTYEEVKQAGRYRE 137
>ECT1_SCHPO (Q9UTI6) Probable ethanolamine-phosphate cytidylyltransferase (EC| 2.7.7.14) (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 365 Score = 51.2 bits (121), Expect = 3e-06 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 IH+D+ I+ +GP P+M L ER LS C++VDEV+ AP+ + + + VVHG Sbjct: 42 IHSDEEITLNKGP--PVMTLEERCLSANTCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG 99 Score = 34.3 bits (77), Expect = 0.35 Identities = 11/27 (40%), Positives = 21/27 (77%) Frame = -1 Query: 624 RPIMNLHERSLSVLACRYVDEVIIGAP 544 +P++NL ER L++L C+Y+ +++G P Sbjct: 247 KPMLNLLERILNLLQCKYISSILVGPP 273
>PCY1A_RAT (P19836) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/116 (26%), Positives = 55/116 (47%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPY 439 +MN +ER +V CRYVDEV+ APW ++ + + I V H I + ++D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 438 AVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKKYYDSKSFVN 271 G++ + IV +++ Y +RN ++ + K+ + SF+N Sbjct: 183 KHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKEL--NVSFIN 236
>PCY1A_HUMAN (P49585) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/116 (26%), Positives = 55/116 (47%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPY 439 +MN +ER +V CRYVDEV+ APW ++ + + I V H I + ++D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 438 AVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKKYYDSKSFVN 271 G++ + IV +++ Y +RN ++ + K+ + SF+N Sbjct: 183 KHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKEL--NVSFIN 236
>PCY1A_CRIGR (P49584) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/116 (26%), Positives = 55/116 (47%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPY 439 +MN +ER +V CRYVDEV+ APW ++ + + I V H I + ++D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 438 AVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKKYYDSKSFVN 271 G++ + IV +++ Y +RN ++ + K+ + SF+N Sbjct: 183 KHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKEL--NVSFIN 236
>PCY1A_MOUSE (P49586) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/116 (26%), Positives = 55/116 (47%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPY 439 +MN +ER +V CRYVDEV+ APW ++ + + I V H I + ++D Y Sbjct: 126 VMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDD---VY 182 Query: 438 AVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKKYYDSKSFVN 271 G++ + IV +++ Y +RN ++ + K+ + SF+N Sbjct: 183 KHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKEL--NVSFIN 236
>PCY1B_RAT (Q9QZC4) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 43.5 bits (101), Expect = 6e-04 Identities = 31/116 (26%), Positives = 54/116 (46%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPY 439 +MN ER ++ CRYVDEVI APW ++ + + I V H I + ++D Y Sbjct: 126 VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDD---VY 182 Query: 438 AVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKKYYDSKSFVN 271 G++ + IV +++ Y +RN ++ + K+ + SF+N Sbjct: 183 KHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKEL--NVSFIN 236
>PCY1B_HUMAN (Q9Y5K3) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 43.5 bits (101), Expect = 6e-04 Identities = 31/116 (26%), Positives = 54/116 (46%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPY 439 +MN ER ++ CRYVDEVI APW ++ + + I V H I + ++D Y Sbjct: 126 VMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDD---VY 182 Query: 438 AVPVAMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKKYYDSKSFVN 271 G++ + IV +++ Y +RN ++ + K+ + SF+N Sbjct: 183 KHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKEL--NVSFIN 236
>PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 424 Score = 38.9 bits (89), Expect = 0.014 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Frame = -1 Query: 603 ERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSNPYAVPV- 427 +R ++ CR+VDEV+ APW ++ + + I V H +++ Y DS+ P+ Sbjct: 158 QRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAH----DDIPYVSADSDDIYKPIK 213 Query: 426 AMGIYHKLESPLDXXXXXXXXXIVSNHEAYQKRNEKKEASEKK 298 MG + + I+ +++ Y RN + A+ ++ Sbjct: 214 EMGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQE 256
>PCY1_CAEEL (P49583) Putative choline-phosphate cytidylyltransferase (EC| 2.7.7.15) (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 362 Score = 37.7 bits (86), Expect = 0.031 Identities = 21/73 (28%), Positives = 30/73 (41%) Frame = -1 Query: 624 RPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAENMDYTEDDSN 445 R + + ER V CRYVDEV APW + + + + + H D+ Sbjct: 128 RTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAH------------DAI 175 Query: 444 PYAVPVAMGIYHK 406 PY P +Y K Sbjct: 176 PYVAPGEEDLYEK 188
>ECT1_YEAST (P33412) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 323 Score = 36.6 bits (83), Expect = 0.070 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHG 487 +HTD+ I +G P+MN ER + R+ EV+ AP+ + + + VVHG Sbjct: 45 VHTDEDIQHNKGT--PVMNSSERYEHTRSNRWCSEVVEAAPYVTDPNWMDKYQCQYVVHG 102 Score = 34.3 bits (77), Expect = 0.35 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGA 547 IM + ER LSVL+C+YVD VII A Sbjct: 243 IMTMKERVLSVLSCKYVDAVIIDA 266
>PCY1_PLAFK (P49587) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 370 Score = 33.9 bits (76), Expect = 0.45 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -1 Query: 618 IMNLHERSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTI 481 + L ER+ ++ R+VDE+I PW ++ + + + I V H I Sbjct: 141 VQTLEERTETLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDI 186
>RM04_YEAST (P36517) 60S ribosomal protein L4, mitochondrial precursor (YmL4)| (MRP-L4) Length = 319 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +1 Query: 466 VHVLSYSPMNNQ*NIKSGNHVFRNVPGSTNDHFVNITASQNT 591 +H L Y+ + Q + NH+ +N+ GST+D F ++ S T Sbjct: 106 LHSLWYNCLREQNVLARENHLLKNIVGSTHDEFSELSNSIRT 147
>TAGD_BACSU (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)| (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D) Length = 129 Score = 30.4 bits (67), Expect = 5.0 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -1 Query: 600 RSLSVLACRYVDEVIIGAPWHISKDMVTTFNISLVVHGTIAE-NMDYTEDDSNPYAVPVA 424 R L + RYVDEVI W K + NI + V G E D+ +D +P Sbjct: 55 RKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRT 114 Query: 423 MGI 415 GI Sbjct: 115 EGI 117
>HLDE_RHILO (Q98I54) Bifunctional protein hldE [Includes: D-beta-D-heptose| 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)] Length = 496 Score = 30.4 bits (67), Expect = 5.0 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVII 553 +++D ++ +GP RP+ + H+R+ + A VD V++ Sbjct: 393 LNSDASVRRLKGPGRPVNDQHDRACVLAALASVDAVVV 430
>HLDE_HELHP (Q7VFZ3) Bifunctional protein hldE [Includes: D-beta-D-heptose| 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)] Length = 482 Score = 29.6 bits (65), Expect = 8.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 666 IHTDQTISSTRGPHRPIMNLHERSLSVLACRYVDEVI 556 ++ D +I +G RPI LH R+L + VD V+ Sbjct: 380 LNDDDSIKRLKGKERPINTLHNRALMLAGLECVDYVV 416 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,097,523 Number of Sequences: 219361 Number of extensions: 1760474 Number of successful extensions: 4232 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4226 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
