ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags13d14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482965.1| Oryza sativa (japonica cultivar-group), mRNA 486 e-134
2dbj|AB110175.1| Oryza sativa (japonica cultivar-group) mRNA for ... 486 e-134
3dbj|AK068050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 486 e-134
4gb|BT017299.1| Zea mays clone EL01N0316B09.c mRNA sequence 424 e-115
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
6dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic D... 206 7e-50
7ref|NM_115090.3| Arabidopsis thaliana unknown protein AT3G52300 ... 127 5e-26
8gb|AY094036.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, co... 127 5e-26
9gb|AY050330.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, co... 127 5e-26
10emb|BX823984.1|CNS0A5JI Arabidopsis thaliana Full-length cDNA Co... 127 5e-26
11gb|AY086788.1| Arabidopsis thaliana clone 27681 mRNA, complete s... 127 5e-26
12emb|AJ271469.1|ATH271469 Arabidopsis thaliana mRNA for mitochond... 127 5e-26
13emb|BX822199.1|CNS0A5TC Arabidopsis thaliana Full-length cDNA Co... 111 3e-21
14emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, B... 100 1e-17
15ref|NM_001035768.1| Arabidopsis thaliana unknown protein AT3G523... 96 2e-16
16emb|BX823132.1|CNS0A5WR Arabidopsis thaliana Full-length cDNA Co... 96 2e-16
17emb|AJ843973.1| Plantago major mRNA for mitochondrial F0 ATP syn... 90 1e-14
18gb|BT013973.1| Lycopersicon esculentum clone 133018R, mRNA sequence 86 2e-13
19emb|BX822317.1|CNS0A5WN Arabidopsis thaliana Full-length cDNA Co... 80 1e-11
20gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete se... 72 3e-09
21gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete s... 72 3e-09
22gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomi... 54 6e-04
23emb|X80765.1|PPPHEHYD P.putida genes for phenolhydroxylase 48 0.038
24emb|X52805.1|PPDMPCD Pseudomonas putida dmpC and dmpD genes for ... 48 0.038
25dbj|D83057.1| Pseudomonas aeruginosa DNA for catechol 2,3-dioxyg... 48 0.038
26gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, comp... 46 0.15
27ref|NG_004788.1| Homo sapiens cofilin pseudogene 1 (CFLP1) on ch... 46 0.15
28gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thalian... 46 0.15
29gb|BC031631.1| Homo sapiens cofilin pseudogene 1, mRNA (cDNA clo... 46 0.15
30dbj|AB046441.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 46 0.15
31gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, co... 46 0.15
32gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, co... 44 0.60
33ref|NM_112685.3| Arabidopsis thaliana HON4; DNA binding AT3G1803... 42 2.4
34gb|AC134458.2| Mus musculus BAC clone RP23-358B17 from chromosom... 42 2.4
35gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.4
36gb|BT006606.1| Arabidopsis thaliana At3g18035 mRNA, complete cds 42 2.4
37emb|BX823749.1|CNS0A6I9 Arabidopsis thaliana Full-length cDNA Co... 42 2.4
38gb|BT002434.1| Arabidopsis thaliana linker histone protein, puta... 42 2.4
39dbj|AB026641.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.4
40gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, comple... 42 2.4
41gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, comple... 42 2.4
42gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosom... 42 2.4
43emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chr... 42 2.4
44gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, com... 40 9.4
45gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequ... 40 9.4
46ref|XM_428367.1| PREDICTED: Gallus gallus similar to chromosome ... 40 9.4
47gb|AY294313.1| Pseudomonas putida NahR (nahR), complete cds; and... 40 9.4
48gb|AC093598.4| Homo sapiens BAC clone RP11-262F18 from 7, comple... 40 9.4
49emb|CR848308.2| Xenopus tropicalis finished cDNA, clone TNeu048i23 40 9.4
50gb|AC121999.3| Mus musculus BAC clone RP24-318P16 from chromosom... 40 9.4
51emb|Z46812.1|CEZK675 Caenorhabditis elegans Cosmid ZK675, comple... 40 9.4
52emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in... 40 9.4
53gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete seq... 40 9.4
54emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100 40 9.4
55gb|AC148398.10| Medicago truncatula clone mth2-24c23, complete s... 40 9.4
56gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 9.4
57emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 ... 40 9.4
58emb|AL109810.13|HS1097F14 Human DNA sequence from clone RP5-1097... 40 9.4
59emb|AL049651.2|HSJ753D10 Human DNA sequence from clone RP4-753D1... 40 9.4
60emb|X60740.1|PAXYLEJI1 Pseudomonas aeruginosa xylEJI104-1 gene f... 40 9.4
61emb|AJ544930.2|UBA544930 Pseudomonas sp. 1YdBTEX2 C23O gene for ... 40 9.4
62emb|AJ544924.2|UBA544924 Pseudomonas sp. 1YB2 C23O gene for cate... 40 9.4
63gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 40 9.4
64emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in ... 40 9.4
65emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 ... 40 9.4
66emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 m... 40 9.4
67emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in... 40 9.4
68gb|AF525494.1| Pseudomonas fluorescens plasmid pLP6a catechol-2,... 40 9.4
69ref|XM_700803.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 9.4
70emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in... 40 9.4
71ref|XM_691529.1| PREDICTED: Danio rerio similar to Dual specific... 40 9.4
72gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3... 40 9.4
73gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complet... 40 9.4
74gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome... 40 9.4
75gb|U01825.1|PSU01825 Pseudomonas sp. IC catechol 2,3-dioxygenase... 40 9.4
76gb|AY228547.1| Pseudomonas sp. A2YC1 catechol 2,3-dioxygenase (c... 40 9.4
77gb|AF478380.1| Vitis vinifera isolate 1R1 copia-like retrotransp... 40 9.4
78emb|AJ582631.1|PST582631 Pseudomonas stutzeri nahT gene, partial... 40 9.4
79emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on ch... 40 9.4
80gb|AF039534.1|AF039534 Pseuodmonas stutzeri transposase-like pro... 40 9.4
81dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-2... 40 9.4
82dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-3... 40 9.4
83dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-1... 40 9.4
84emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-3... 40 9.4
85gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, co... 40 9.4
86emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-3... 40 9.4
87dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 9.4
88dbj|AP001068.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 9.4
89dbj|AB001722.1| Pseudomonas stutzeri carbazole catabolic genes, ... 40 9.4 
>ref|XM_482965.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score =  486 bits (245), Expect = e-134
 Identities = 431/493 (87%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           |||| |||||||  |||||||| || |||||||| ||||||| |||||  ||||| ||||
Sbjct: 623 agtagccccagttgtcgttacggatttcatcatcgaacttctgcttgacctcaggatgct 564

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           | |||||||| || |||||||||||||||||||| |||||||||||||||| || |||||
Sbjct: 563 ttgcaaagtattcatctgctgtcattgtgctgatatttttcttcatctcctgcaattcag 504

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           ||| ||||||||||||||||||||| |||||||||||   ||| ||||| || ||||  |
Sbjct: 503 caagctccttctctatcctctctgactccttcagagactccttttctgcttctttcagct 444

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || | ||| ||||||||||||||||| ||| ||||||| || |||||||| ||||| |
Sbjct: 443 caacaagcagcgcatcaaactttggcttgtactgaggagtcacggtgtcaacgtacttgg 384

                                                                       
Query: 376 ggatctcaatgctatcataagcctccttgtacatatccacaacttttgatccgattcctt 435
           |||| |||||||| |||||||| |||||||||||||| |||||||| || || |||||||
Sbjct: 383 ggatttcaatgctttcataagcttccttgtacatatctacaactttagacccaattcctt 324

                                                                       
Query: 436 ttctgtagtattcccagtcaattggctgtggttcctgggagaacttggtctggagctggt 495
           |||||||||| ||||||||||| || || || ||||| ||||||||||||||||||||||
Sbjct: 323 ttctgtagtactcccagtcaatcggttggggctcctgagagaacttggtctggagctggt 264

                                                                       
Query: 496 ggttgacgtcctcgaaggtgcggcggaggttggcgaactccttccgggcctcctcggaga 555
           ||||||||||||||||||||||||||||| ||  ||||||||| || ||||| |||||||
Sbjct: 263 ggttgacgtcctcgaaggtgcggcggagggtgttgaactccttgcgcgcctcgtcggaga 204

                                                                       
Query: 556 cgagcatcttcgccatgccgtcccagtcgatcgccttcccggccttggccgcaacgtccg 615
           |||||||||| ||||| || |||||||||||||||||||||||||| || || || ||||
Sbjct: 203 cgagcatcttggccatcccctcccagtcgatcgccttcccggccttcgcggccacctccg 144

                        
Query: 616 ccaccttcttcac 628
           |||||||||||||
Sbjct: 143 ccaccttcttcac 131
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>dbj|AB110175.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 13YPG010
          Length = 893

 Score =  486 bits (245), Expect = e-134
 Identities = 431/493 (87%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           |||| |||||||  |||||||| || |||||||| ||||||| |||||  ||||| ||||
Sbjct: 555 agtagccccagttgtcgttacggatttcatcatcgaacttctgcttgacctcaggatgct 496

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           | |||||||| || |||||||||||||||||||| |||||||||||||||| || |||||
Sbjct: 495 ttgcaaagtattcatctgctgtcattgtgctgatatttttcttcatctcctgcaattcag 436

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           ||| ||||||||||||||||||||| |||||||||||   ||| ||||| || ||||  |
Sbjct: 435 caagctccttctctatcctctctgactccttcagagactccttttctgcttctttcagct 376

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || | ||| ||||||||||||||||| ||| ||||||| || |||||||| ||||| |
Sbjct: 375 caacaagcagcgcatcaaactttggcttgtactgaggagtcacggtgtcaacgtacttgg 316

                                                                       
Query: 376 ggatctcaatgctatcataagcctccttgtacatatccacaacttttgatccgattcctt 435
           |||| |||||||| |||||||| |||||||||||||| |||||||| || || |||||||
Sbjct: 315 ggatttcaatgctttcataagcttccttgtacatatctacaactttagacccaattcctt 256

                                                                       
Query: 436 ttctgtagtattcccagtcaattggctgtggttcctgggagaacttggtctggagctggt 495
           |||||||||| ||||||||||| || || || ||||| ||||||||||||||||||||||
Sbjct: 255 ttctgtagtactcccagtcaatcggttggggctcctgagagaacttggtctggagctggt 196

                                                                       
Query: 496 ggttgacgtcctcgaaggtgcggcggaggttggcgaactccttccgggcctcctcggaga 555
           ||||||||||||||||||||||||||||| ||  ||||||||| || ||||| |||||||
Sbjct: 195 ggttgacgtcctcgaaggtgcggcggagggtgttgaactccttgcgcgcctcgtcggaga 136

                                                                       
Query: 556 cgagcatcttcgccatgccgtcccagtcgatcgccttcccggccttggccgcaacgtccg 615
           |||||||||| ||||| || |||||||||||||||||||||||||| || || || ||||
Sbjct: 135 cgagcatcttggccatcccctcccagtcgatcgccttcccggccttcgcggccacctccg 76

                        
Query: 616 ccaccttcttcac 628
           |||||||||||||
Sbjct: 75  ccaccttcttcac 63
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>dbj|AK068050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P20, full
           insert sequence
          Length = 927

 Score =  486 bits (245), Expect = e-134
 Identities = 431/493 (87%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           |||| |||||||  |||||||| || |||||||| ||||||| |||||  ||||| ||||
Sbjct: 623 agtagccccagttgtcgttacggatttcatcatcgaacttctgcttgacctcaggatgct 564

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           | |||||||| || |||||||||||||||||||| |||||||||||||||| || |||||
Sbjct: 563 ttgcaaagtattcatctgctgtcattgtgctgatatttttcttcatctcctgcaattcag 504

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           ||| ||||||||||||||||||||| |||||||||||   ||| ||||| || ||||  |
Sbjct: 503 caagctccttctctatcctctctgactccttcagagactccttttctgcttctttcagct 444

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || | ||| ||||||||||||||||| ||| ||||||| || |||||||| ||||| |
Sbjct: 443 caacaagcagcgcatcaaactttggcttgtactgaggagtcacggtgtcaacgtacttgg 384

                                                                       
Query: 376 ggatctcaatgctatcataagcctccttgtacatatccacaacttttgatccgattcctt 435
           |||| |||||||| |||||||| |||||||||||||| |||||||| || || |||||||
Sbjct: 383 ggatttcaatgctttcataagcttccttgtacatatctacaactttagacccaattcctt 324

                                                                       
Query: 436 ttctgtagtattcccagtcaattggctgtggttcctgggagaacttggtctggagctggt 495
           |||||||||| ||||||||||| || || || ||||| ||||||||||||||||||||||
Sbjct: 323 ttctgtagtactcccagtcaatcggttggggctcctgagagaacttggtctggagctggt 264

                                                                       
Query: 496 ggttgacgtcctcgaaggtgcggcggaggttggcgaactccttccgggcctcctcggaga 555
           ||||||||||||||||||||||||||||| ||  ||||||||| || ||||| |||||||
Sbjct: 263 ggttgacgtcctcgaaggtgcggcggagggtgttgaactccttgcgcgcctcgtcggaga 204

                                                                       
Query: 556 cgagcatcttcgccatgccgtcccagtcgatcgccttcccggccttggccgcaacgtccg 615
           |||||||||| ||||| || |||||||||||||||||||||||||| || || || ||||
Sbjct: 203 cgagcatcttggccatcccctcccagtcgatcgccttcccggccttcgcggccacctccg 144

                        
Query: 616 ccaccttcttcac 628
           |||||||||||||
Sbjct: 143 ccaccttcttcac 131
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>gb|BT017299.1| Zea mays clone EL01N0316B09.c mRNA sequence
          Length = 778

 Score =  424 bits (214), Expect = e-115
 Identities = 393/450 (87%), Gaps = 2/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 138 tatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgcttc 197
           |||||||||| ||||||||| || ||||| |||||||||||| |||||||||||| ||||
Sbjct: 531 tatccccagttatcgttacggatttcatcgtcaaacttcttcctgagttcagggtacttc 472

                                                                       
Query: 198 gcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcagca 257
            ||||||| || |||||||||||||| |||||||||||| |||| |||| ||||||||||
Sbjct: 471 tcaaagtaatcatctgctgtcattgtactgatctttttcctcatttcctccatttcagca 412

                                                                       
Query: 258 atctccttctctatcctctctgattccttcaga-gatgtcttctctgcctccttcaattc 316
           |  |||||||||||||| ||||| |||||| || | | | ||||| |||||||| |||||
Sbjct: 411 agttccttctctatcctttctgactccttctgatgctct-ttctcagcctcctttaattc 353

                                                                       
Query: 317 gactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgg 376
             | | || |||||||||||||||||| ||| | ||||| || ||||| || ||||||||
Sbjct: 352 agcaatcacagcatcaaactttggcttgtactggggagtaactgtgtcgacgtacttcgg 293

                                                                       
Query: 377 gatctcaatgctatcataagcctccttgtacatatccacaacttttgatccgattccttt 436
           |||||| ||||| ||| ||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 292 gatctcgatgctttcaaaagcctctttgtacatatccaccacttttgatccaattccttt 233

                                                                       
Query: 437 tctgtagtattcccagtcaattggctgtggttcctgggagaacttggtctggagctggtg 496
           ||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 232 tctgtagtactcccaatcaatcggctggggttcctgggagaacttggtctggagctggtg 173

                                                                       
Query: 497 gttgacgtcctcgaaggtgcggcggaggttggcgaactccttccgggcctcctcggagac 556
           ||||||||| ||||| | ||||||||||  |||||||||||| || ||||| |||| |||
Sbjct: 172 gttgacgtcatcgaaagcgcggcggagggcggcgaactccttgcgcgcctcgtcggtgac 113

                                         
Query: 557 gagcatcttcgccatgccgtcccagtcgat 586
           ||||| ||| ||||||||||||||||||||
Sbjct: 112 gagcaacttggccatgccgtcccagtcgat 83
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  206 bits (104), Expect = 7e-50
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctgggagaacttggtctggagctggtggttgacgtcctcgaaggtgcggcggaggttgg 528
                |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 23574618 cctgagagaacttggtctggagctggtggttgacgtcctcgaaggtgcggcggagggtgt 23574677

                                                                            
Query: 529      cgaactccttccgggcctcctcggagacgagcatcttcgccatgccgtcccagtcgatcg 588
                 ||||||||| || ||||| ||||||||||||||||| ||||| || |||||||||||||
Sbjct: 23574678 tgaactccttgcgcgcctcgtcggagacgagcatcttggccatcccctcccagtcgatcg 23574737

                                                        
Query: 589      ccttcccggccttggccgcaacgtccgccaccttcttcac 628
                ||||||||||||| || || || |||||||||||||||||
Sbjct: 23574738 ccttcccggccttcgcggccacctccgccaccttcttcac 23574777



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                            
Query: 136      agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
                |||| |||||||  |||||||| || |||||||| ||||||| |||||  ||||| ||||
Sbjct: 23572358 agtagccccagttgtcgttacggatttcatcatcgaacttctgcttgacctcaggatgct 23572417

                                                          
Query: 196      tcgcaaagtactcgtctgctgtcattgtgctgatctttttct 237
                | |||||||| || |||||||||||||||||||| |||||||
Sbjct: 23572418 ttgcaaagtattcatctgctgtcattgtgctgatatttttct 23572459



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 390      tcataagcctccttgtacatatccacaacttttgatccgattccttttctgtagtattcc 449
                |||||||| |||||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 23573881 tcataagcttccttgtacatatctacaactttagacccaattccttttctgtagtactcc 23573940

                        
Query: 450      cagtcaat 457
                ||||||||
Sbjct: 23573941 cagtcaat 23573948



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                         
Query: 236      cttcatctccttcatttcagcaatctccttctctatcctctctgattccttcagaga 292
                ||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 23572581 cttcatctcctgcaattcagcaagctccttctctatcctctctgactccttcagaga 23572637



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                            
Query: 327      gcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaatg 386
                ||||||||||||||||| ||| ||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 23572826 gcatcaaactttggcttgtactgaggagtcacggtgtcaacgtacttggggatttcaatg 23572885

                 
Query: 387      c 387
                |
Sbjct: 23572886 c 23572886
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>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1666_A04
          Length = 90097

 Score =  206 bits (104), Expect = 7e-50
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                         
Query: 469   cctgggagaacttggtctggagctggtggttgacgtcctcgaaggtgcggcggaggttgg 528
             |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 54393 cctgagagaacttggtctggagctggtggttgacgtcctcgaaggtgcggcggagggtgt 54452

                                                                         
Query: 529   cgaactccttccgggcctcctcggagacgagcatcttcgccatgccgtcccagtcgatcg 588
              ||||||||| || ||||| ||||||||||||||||| ||||| || |||||||||||||
Sbjct: 54453 tgaactccttgcgcgcctcgtcggagacgagcatcttggccatcccctcccagtcgatcg 54512

                                                     
Query: 589   ccttcccggccttggccgcaacgtccgccaccttcttcac 628
             ||||||||||||| || || || |||||||||||||||||
Sbjct: 54513 ccttcccggccttcgcggccacctccgccaccttcttcac 54552



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                         
Query: 136   agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
             |||| |||||||  |||||||| || |||||||| ||||||| |||||  ||||| ||||
Sbjct: 52133 agtagccccagttgtcgttacggatttcatcatcgaacttctgcttgacctcaggatgct 52192

                                                       
Query: 196   tcgcaaagtactcgtctgctgtcattgtgctgatctttttct 237
             | |||||||| || |||||||||||||||||||| |||||||
Sbjct: 52193 ttgcaaagtattcatctgctgtcattgtgctgatatttttct 52234



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 390   tcataagcctccttgtacatatccacaacttttgatccgattccttttctgtagtattcc 449
             |||||||| |||||||||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 53656 tcataagcttccttgtacatatctacaactttagacccaattccttttctgtagtactcc 53715

                     
Query: 450   cagtcaat 457
             ||||||||
Sbjct: 53716 cagtcaat 53723



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                      
Query: 236   cttcatctccttcatttcagcaatctccttctctatcctctctgattccttcagaga 292
             ||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 52356 cttcatctcctgcaattcagcaagctccttctctatcctctctgactccttcagaga 52412



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 327   gcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaatg 386
             ||||||||||||||||| ||| ||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 52601 gcatcaaactttggcttgtactgaggagtcacggtgtcaacgtacttggggatttcaatg 52660

              
Query: 387   c 387
             |
Sbjct: 52661 c 52661
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>ref|NM_115090.3| Arabidopsis thaliana unknown protein AT3G52300 transcript variant
           AT3G52300.1 mRNA, complete cds
          Length = 889

 Score =  127 bits (64), Expect = 5e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 629 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 570

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 569 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 510

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 509 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 450

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 449 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 390

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | ||||||||||| |||||||| |||||||||
Sbjct: 389 gaatctcaatgctgtcataagcttccttgtac 358
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>gb|AY094036.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, complete cds
          Length = 507

 Score =  127 bits (64), Expect = 5e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 505 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 446

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 445 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 386

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 385 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 326

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 325 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 266

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | ||||||||||| |||||||| |||||||||
Sbjct: 265 gaatctcaatgctgtcataagcttccttgtac 234
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>gb|AY050330.1| Arabidopsis thaliana AT3g52300/T25B15_70 mRNA, complete cds
          Length = 812

 Score =  127 bits (64), Expect = 5e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 580 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 521

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 520 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 461

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 460 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 401

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 400 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 341

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | ||||||||||| |||||||| |||||||||
Sbjct: 340 gaatctcaatgctgtcataagcttccttgtac 309
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>emb|BX823984.1|CNS0A5JI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH12ZD02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 712

 Score =  127 bits (64), Expect = 5e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 474 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 415

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 414 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 355

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 354 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 295

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 294 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 235

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | ||||||||||| |||||||| |||||||||
Sbjct: 234 gaatctcaatgctgtcataagcttccttgtac 203
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>gb|AY086788.1| Arabidopsis thaliana clone 27681 mRNA, complete sequence
          Length = 789

 Score =  127 bits (64), Expect = 5e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 629 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 570

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 569 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 510

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 509 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 450

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 449 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 390

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | ||||||||||| |||||||| |||||||||
Sbjct: 389 gaatctcaatgctgtcataagcttccttgtac 358
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>emb|AJ271469.1|ATH271469 Arabidopsis thaliana mRNA for mitochondrial F0 ATP synthase D chain
           (p_D gene)
          Length = 720

 Score =  127 bits (64), Expect = 5e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 484 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 425

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 424 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 365

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 364 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 305

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 304 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 245

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | ||||||||||| |||||||| |||||||||
Sbjct: 244 gaatctcaatgctgtcataagcttccttgtac 213
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>emb|BX822199.1|CNS0A5TC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB1ZA08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 777

 Score =  111 bits (56), Expect = 3e-21
 Identities = 218/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 550 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 491

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||||| ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 490 tctcaaagtactcatctgcagtcatggtgctgagctttttgctgatctcttggacatcag 431

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  || || ||||| || ||| |||  ||||| || |||| ||
Sbjct: 430 caatttctttctccaaccgttcagactccttgagcgatttctgttctgcttctttcagtt 371

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||| ||  ||||||| ||||| |
Sbjct: 370 ccaccaacaaagcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttg 311

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | |||| |||||| | |||||| |||||||||
Sbjct: 310 gaatcttaatgctgtgataagcttccttgtac 279
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>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15
          Length = 77350

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                         
Query: 136   agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
             ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 51628 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 51569

                                                       
Query: 196   tcgcaaagtactcgtctgctgtcattgtgctgatctttttct 237
             || |||||||||| ||||| ||||| ||||||| ||||||||
Sbjct: 51568 tctcaaagtactcatctgcagtcatggtgctgagctttttct 51527



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 326   agcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaat 385
             |||||||||||||||||| ||   |||||| ||  ||||||| ||||| || ||||||||
Sbjct: 51224 agcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttggaatctcaat 51165

               
Query: 386   gc 387
             ||
Sbjct: 51164 gc 51163
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>ref|NM_001035768.1| Arabidopsis thaliana unknown protein AT3G52300 transcript variant
           AT3G52300.2 mRNA, complete cds
          Length = 893

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 633 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 574

                                                   
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatcttttt 235
           || |||||||||| ||||| ||||| ||||||| ||||||
Sbjct: 573 tctcaaagtactcatctgcagtcatggtgctgagcttttt 534



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 326 agcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaat 385
           |||||||||||||||||| ||   |||||| ||  ||||||| ||||| || ||||||||
Sbjct: 439 agcatcaaactttggcttgtattcaggagtaactttgtcaacgtactttggaatctcaat 380

                                 
Query: 386 gctatcataagcctccttgtac 407
           ||| |||||||| |||||||||
Sbjct: 379 gctgtcataagcttccttgtac 358
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>emb|BX823132.1|CNS0A5WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZD08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 774

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 216/272 (79%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||| | |||| ||
Sbjct: 545 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagtaccgggttct 486

                                                                       
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttcag 255
           || |||||||||| ||| | ||||| ||||||| ||||||  | ||||| |  |  ||||
Sbjct: 485 tctcaaagtactcatctacagtcatggtgctgaactttttgctgatctcttggacatcag 426

                                                                       
Query: 256 caatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaatt 315
           |||| || ||||| | ||  ||  | ||||| || ||| |||  ||||| || |||| ||
Sbjct: 425 caatttctttctccaaccgttcatactccttgagcgatttctgttctgcttctttcagtt 366

                                                                       
Query: 316 cgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcg 375
           | || |||| |||||||||||||||||| ||   |||||||||  ||||||| ||||| |
Sbjct: 365 ccaccaacaaagcatcaaactttggcttgtattcaggagtgactttgtcaacgtactttg 306

                                           
Query: 376 ggatctcaatgctatcataagcctccttgtac 407
           | |||| |||||| |||||||| |||||||||
Sbjct: 305 gaatcttaatgctgtcataagcgtccttgtac 274
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>emb|AJ843973.1| Plantago major mRNA for mitochondrial F0 ATP synthase delta chain
           (atp5 gene)
          Length = 803

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 123/149 (82%)
 Strand = Plus / Minus

                                                                       
Query: 438 ctgtagtattcccagtcaattggctgtggttcctgggagaacttggtctggagctggtgg 497
           |||||||| ||||||||||| ||   |||||||||   ||| |||||||||||||||  |
Sbjct: 279 ctgtagtactcccagtcaatgggtactggttcctgactgaatttggtctggagctgggtg 220

                                                                       
Query: 498 ttgacgtcctcgaaggtgcggcggaggttggcgaactccttccgggcctcctcggagacg 557
           ||||| || ||||||| ||||||||||  |  ||||||||| || ||||| |||||||||
Sbjct: 219 ttgacatcgtcgaaggcgcggcggagggcgaagaactccttgcgagcctcatcggagacg 160

                                        
Query: 558 agcatcttcgccatgccgtcccagtcgat 586
           || | ||| |||||||| ||||| |||||
Sbjct: 159 agaaccttggccatgccttcccaatcgat 131



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 165 tcatcaaacttcttcttgagttcagggtgcttcgcaaagtactcgtctgctgtcattgtg 224
           ||||| || |||| |||||  ||||| ||||| || ||||||||||| |||||||| |||
Sbjct: 552 tcatcgaatttctccttgacctcaggatgcttggcgaagtactcgtcagctgtcatggtg 493

                           
Query: 225 ctgatctttttcttca 240
           || | ||| |||||||
Sbjct: 492 ctaaccttgttcttca 477
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>gb|BT013973.1| Lycopersicon esculentum clone 133018R, mRNA sequence
          Length = 860

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 217/275 (78%)
 Strand = Plus / Minus

                                                                       
Query: 135 tagtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgc 194
           ||||| |||||||| ||||| || || ||||||||||| |||||||| |  || || |||
Sbjct: 567 tagtagccccagtagtcgtttcgaatttcatcatcaaatttcttctttaactcgggatgc 508

                                                                       
Query: 195 ttcgcaaagtactcgtctgctgtcattgtgctgatctttttcttcatctccttcatttca 254
           || |||||||| || ||||||||||| || ||||  |||||||||| ||| |  |  || 
Sbjct: 507 tttgcaaagtattcttctgctgtcatggtactgagttttttcttcaactcttggacctcg 448

                                                                       
Query: 255 gcaatctccttctctatcctctctgattccttcagagatgtcttctctgcctccttcaat 314
           ||||  ||||| ||||  || || || ||||| ||||||  |||||| || || |||| |
Sbjct: 447 gcaacttccttttctaatctttcagactccttgagagattgcttctcagcttctttcagt 388

                                                                       
Query: 315 tcgactaacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttc 374
           || || |||| |||||||||||| || || ||  ||||||| || |||||  || |||| 
Sbjct: 387 tccaccaacaaagcatcaaacttgggtttgtattgaggagtaactgtgtcctcaaacttg 328

                                              
Query: 375 gggatctcaatgctatcataagcctccttgtacat 409
           |||||||||||||| ||||| || || ||||||||
Sbjct: 327 gggatctcaatgctttcataggcttctttgtacat 293
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>emb|BX822317.1|CNS0A5WN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 755

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 136 agtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgct 195
           ||||||||||||  || ||||| || || |||||||||||||| |||||||| |||||||
Sbjct: 562 agtatccccagttgtcattacggatttcgtcatcaaacttctttttgagttccgggtgct 503

                                                   
Query: 196 tcgcaaagtactcgtctgctgtcattgtgctgatcttttt 235
           || |||||||||  ||| | ||||| ||||||| ||||||
Sbjct: 502 tctcaaagtacttatcttcagtcatggtgctgagcttttt 463



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 321 aacagagcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatc 380
           |||| |||||||||||||||||| ||   |||||||||  ||||||| ||||| |  |||
Sbjct: 377 aacaaagcatcaaactttggcttgtattcaggagtgactttgtcaacgtactttgaaatc 318

                                      
Query: 381 tcaatgctatcataagcctccttgtac 407
           | |||||| |||||||| |||||||||
Sbjct: 317 taaatgctgtcataagcttccttgtac 291
to top
>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence
          Length = 121144

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 141   ccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgcttcgca 200
             ||||||| |||||| |  |||||||||||||| |||||||| || ||||| ||||  |||
Sbjct: 95271 ccccagttatcgttcctaatctcatcatcaaatttcttctttagctcaggatgctcggca 95212

                                 
Query: 201   aagtactcgtctgctgtcat 220
             |||||||| |||||||||||
Sbjct: 95211 aagtactcatctgctgtcat 95192



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 327   gcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaatg 386
             |||||||| || ||||||||  ||||||| || ||||||||| |||| ||||||||||||
Sbjct: 94917 gcatcaaatttaggcttatattgaggagttactgtgtcaacaaacttggggatctcaatg 94858

              
Query: 387   c 387
             |
Sbjct: 94857 c 94857



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 549   tcggagacgagcatcttcgccatgccgtcccagtcgatcgccttcccggccttg 602
             |||| |||||| | ||| ||||| |||||||| ||||||  |||||||||||||
Sbjct: 92198 tcggtgacgagaagcttagccatcccgtcccaatcgatcttcttcccggccttg 92145
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>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence
          Length = 142154

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 141   ccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgcttcgca 200
             ||||||| |||||| |  |||||||||||||| |||||||| || ||||| ||||  |||
Sbjct: 95275 ccccagttatcgttcctaatctcatcatcaaatttcttctttagctcaggatgctcggca 95216

                                 
Query: 201   aagtactcgtctgctgtcat 220
             |||||||| |||||||||||
Sbjct: 95215 aagtactcatctgctgtcat 95196



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 327   gcatcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaatg 386
             |||||||| || ||||||||  ||||||| || ||||||||| |||| ||||||||||||
Sbjct: 94921 gcatcaaatttaggcttatattgaggagttactgtgtcaacaaacttggggatctcaatg 94862

              
Query: 387   c 387
             |
Sbjct: 94861 c 94861



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 549   tcggagacgagcatcttcgccatgccgtcccagtcgatcgccttcccggccttg 602
             |||| |||||| | ||| ||||| |||||||| ||||||  |||||||||||||
Sbjct: 92202 tcggtgacgagaagcttagccatcccgtcccaatcgatcttcttcccggccttg 92149
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>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete
             sequence
          Length = 91755

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                         
Query: 135   tagtatccccagtaatcgttacgcatctcatcatcaaacttcttcttgagttcagggtgc 194
             ||||| |||||||| || || || || ||||||||||| |||||||| |  || || |||
Sbjct: 61816 tagtagccccagtagtcatttcgaatttcatcatcaaatttcttctttaactcgggatgc 61757

                                                        
Query: 195   ttcgcaaagtactcgtctgctgtcattgtgctgatctttttct 237
             || |||||||| || ||||||||||| || ||||  |||||||
Sbjct: 61756 tttgcaaagtattcttctgctgtcatggtactgagttttttct 61714
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>emb|X80765.1|PPPHEHYD P.putida genes for phenolhydroxylase
          Length = 6343

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            ||||||||||||||||||||||||
Sbjct: 6287 ggttgacgtcctcgaaggtgcggc 6264
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>emb|X52805.1|PPDMPCD Pseudomonas putida dmpC and dmpD genes for 2-hydroxymuconic
           semialdehyde dehydrogenase and 2-hydroxymuconic
           semialdehyde hydrolase
          Length = 2493

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 496 ggttgacgtcctcgaaggtgcggc 519
           ||||||||||||||||||||||||
Sbjct: 176 ggttgacgtcctcgaaggtgcggc 153
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>dbj|D83057.1| Pseudomonas aeruginosa DNA for catechol 2,3-dioxygenase, complete cds
          Length = 1260

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            ||||||||||||||||||||||||
Sbjct: 1078 ggttgacgtcctcgaaggtgcggc 1055
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>gb|AC022016.7| Homo sapiens chromosome 10 clone RP11-165M8, complete sequence
          Length = 163031

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 465   ggttcctgggagaacttggtctg 487
             |||||||||||||||||||||||
Sbjct: 62367 ggttcctgggagaacttggtctg 62345
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>ref|NG_004788.1| Homo sapiens cofilin pseudogene 1 (CFLP1) on chromosome 10
          Length = 26979

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 465   ggttcctgggagaacttggtctg 487
             |||||||||||||||||||||||
Sbjct: 26333 ggttcctgggagaacttggtctg 26311
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>gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thaliana Clone T32B03 From Chromosome
             V, complete sequence
          Length = 96262

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 329   atcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaatgc 387
             ||||||||||||||| ||    ||| ||||||||||||| ||||| || ||||||||||
Sbjct: 47004 atcaaactttggcttgtatttcggaatgacagtgtcaacgtacttaggaatctcaatgc 47062
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>gb|BC031631.1| Homo sapiens cofilin pseudogene 1, mRNA (cDNA clone IMAGE:5168640)
          Length = 2163

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 465  ggttcctgggagaacttggtctg 487
            |||||||||||||||||||||||
Sbjct: 1053 ggttcctgggagaacttggtctg 1031
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>dbj|AB046441.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:T15D5
          Length = 75370

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 329   atcaaactttggcttataccgaggagtgacagtgtcaacatacttcgggatctcaatgc 387
             ||||||||||||||| ||    ||| ||||||||||||| ||||| || ||||||||||
Sbjct: 66292 atcaaactttggcttgtatttcggaatgacagtgtcaacgtacttaggaatctcaatgc 66234
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>gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, complete sequence
          Length = 218336

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 465  ggttcctgggagaacttggtctg 487
            |||||||||||||||||||||||
Sbjct: 3405 ggttcctgggagaacttggtctg 3383
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>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence
          Length = 215147

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 226   tgatctttttcttcatctcctt 247
             ||||||||||||||||||||||
Sbjct: 85147 tgatctttttcttcatctcctt 85168
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>ref|NM_112685.3| Arabidopsis thaliana HON4; DNA binding AT3G18035 (HON4) mRNA,
            complete cds
          Length = 1903

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 167  atcaaacttcttcttgagttc 187
            |||||||||||||||||||||
Sbjct: 1318 atcaaacttcttcttgagttc 1298
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>gb|AC134458.2| Mus musculus BAC clone RP23-358B17 from chromosome 18, complete
             sequence
          Length = 179314

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     ttatgttggaatttcaacaag 23
             |||||||||||||||||||||
Sbjct: 63852 ttatgttggaatttcaacaag 63872
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 611    gtccgccaccttcttcaccccgctc 635
              ||||||||||||||||||| |||||
Sbjct: 999804 gtccgccaccttcttcaccgcgctc 999780
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>gb|BT006606.1| Arabidopsis thaliana At3g18035 mRNA, complete cds
          Length = 1443

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 167  atcaaacttcttcttgagttc 187
            |||||||||||||||||||||
Sbjct: 1152 atcaaacttcttcttgagttc 1132
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>emb|BX823749.1|CNS0A6I9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZA08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1664

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 167  atcaaacttcttcttgagttc 187
            |||||||||||||||||||||
Sbjct: 1298 atcaaacttcttcttgagttc 1278
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>gb|BT002434.1| Arabidopsis thaliana linker histone protein, putative (At3g18035)
            mRNA, complete cds
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 167  atcaaacttcttcttgagttc 187
            |||||||||||||||||||||
Sbjct: 1322 atcaaacttcttcttgagttc 1302
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>dbj|AB026641.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBG14
          Length = 6588

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  atcaaacttcttcttgagttc 187
            |||||||||||||||||||||
Sbjct: 5364 atcaaacttcttcttgagttc 5384
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>gb|AC147219.5| Mus musculus BAC clone RP23-37K18 from 18, complete sequence
          Length = 183177

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 265   tctctatcctctctgattcct 285
             |||||||||||||||||||||
Sbjct: 80999 tctctatcctctctgattcct 80979
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>gb|AC155253.1| Mus musculus BAC clone RP24-172G9 from 17, complete sequence
          Length = 160193

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 274    tctctgattccttcagagatg 294
              |||||||||||||||||||||
Sbjct: 100924 tctctgattccttcagagatg 100904
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>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete sequence
          Length = 178741

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 274    tctctgattccttcagagatg 294
              |||||||||||||||||||||
Sbjct: 130348 tctctgattccttcagagatg 130328
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>emb|CT030652.14| Mouse DNA sequence from clone RP23-48G20 on chromosome 17, complete
             sequence
          Length = 221351

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   tctctgattccttcagagatg 294
             |||||||||||||||||||||
Sbjct: 42673 tctctgattccttcagagatg 42653
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>gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, complete sequence
          Length = 83042

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 496   ggttgacgtcctcgaaggtgcggc 519
             |||||| |||||||||||||||||
Sbjct: 47581 ggttgatgtcctcgaaggtgcggc 47604
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>gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequence
          Length = 101858

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 496   ggttgacgtcctcgaaggtgcggc 519
             |||||| |||||||||||||||||
Sbjct: 87386 ggttgatgtcctcgaaggtgcggc 87409
to top
>ref|XM_428367.1| PREDICTED: Gallus gallus similar to chromosome 18 open reading
           frame 30 (LOC430817), partial mRNA
          Length = 692

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 230 ctttttcttcatctccttcatttc 253
           |||||||||||||| |||||||||
Sbjct: 124 ctttttcttcatcttcttcatttc 101
to top
>gb|AY294313.1| Pseudomonas putida NahR (nahR), complete cds; and salicylate
            degradation gene cluster, complete sequence
          Length = 11911

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 4487 ggttgatgtcctcgaaggtgcggc 4464
to top
>gb|AC093598.4| Homo sapiens BAC clone RP11-262F18 from 7, complete sequence
          Length = 50840

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 363   tcaacatacttcgggatctcaatg 386
             |||||||||||| |||||||||||
Sbjct: 36873 tcaacatacttctggatctcaatg 36896
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>emb|CR848308.2| Xenopus tropicalis finished cDNA, clone TNeu048i23
          Length = 1824

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  cttctctgcctccttcaatt 315
            ||||||||||||||||||||
Sbjct: 1011 cttctctgcctccttcaatt 992
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>gb|AC121999.3| Mus musculus BAC clone RP24-318P16 from chromosome 8, complete sequence
          Length = 192510

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ccagagggacaaagaagtat 91
             ||||||||||||||||||||
Sbjct: 90265 ccagagggacaaagaagtat 90284
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>emb|Z46812.1|CEZK675 Caenorhabditis elegans Cosmid ZK675, complete sequence
          Length = 22703

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aagtttggatgatgaaattc 72
             ||||||||||||||||||||
Sbjct: 12889 aagtttggatgatgaaattc 12870
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>emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in linkage group 9,
             complete sequence
          Length = 292409

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   tctcatcatcaaacttcttc 179
             ||||||||||||||||||||
Sbjct: 54675 tctcatcatcaaacttcttc 54656
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>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence
          Length = 115348

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    tcttcatctccttcatttca 254
              ||||||||||||||||||||
Sbjct: 104263 tcttcatctccttcatttca 104244
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>emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tctttttcttcatctccttcattt 252
             ||||||||||| ||||||||||||
Sbjct: 45757 tctttttcttcctctccttcattt 45734
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>gb|AC148398.10| Medicago truncatula clone mth2-24c23, complete sequence
          Length = 123656

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   tttcttcatctccttcattt 252
             ||||||||||||||||||||
Sbjct: 80382 tttcttcatctccttcattt 80363
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 64      atgaaattccagagggacaaagaa 87
               ||||||||||||| ||||||||||
Sbjct: 1806446 atgaaattccagatggacaaagaa 1806469
to top
>emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 on chromosome 6q26-27 Contains a
              novel gene, the MAS1 oncogene, the 5' end of the IGF2R gene
              for insulin-like growth factor 2 receptor
              (cation-independent mannose-6 phosphate receptor,
              Insulin-like growth factor-2 receptor (mannose-6-phosphate
              receptor, cation-independent)) (MPRI, CD222, CIMPR, M6P-R)
              and two CpG islands, complete sequence
          Length = 129968

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    ctctgattccttcagagatg 294
              ||||||||||||||||||||
Sbjct: 122103 ctctgattccttcagagatg 122084
to top
>emb|AL109810.13|HS1097F14 Human DNA sequence from clone RP5-1097F14 on chromosome 1q42.13-43
             Contains a peptidylprolyl isomerase A (cyclophilin A)
             pseudogene (PPIA), the gene for a novel protein similar to
             tripartite motif-containing 9 (TRIM9), a novel gene and
             three CpG islands, complete sequence
          Length = 123657

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tctccttctctatcctctct 278
             ||||||||||||||||||||
Sbjct: 76897 tctccttctctatcctctct 76916
to top
>emb|AL049651.2|HSJ753D10 Human DNA sequence from clone RP4-753D10 on chromosome 20 Contains the
             SSTR4 gene for somatostatin receptor 4, the THBD gene for
             thrombomodulin, two novel genes and two CpG islands,
             complete sequence
          Length = 97912

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 231   tttttcttcatctccttcatttca 254
             ||||||||||| ||||||||||||
Sbjct: 13932 tttttcttcatttccttcatttca 13955
to top
>emb|X60740.1|PAXYLEJI1 Pseudomonas aeruginosa xylEJI104-1 gene for catechol 2,3-dioxygenase
          Length = 1247

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 1065 ggttgatgtcctcgaaggtgcggc 1042
to top
>emb|AJ544930.2|UBA544930 Pseudomonas sp. 1YdBTEX2 C23O gene for catechol 2,3 dioxygenase,
            strain 1YdBTEX2
          Length = 1556

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 1141 ggttgatgtcctcgaaggtgcggc 1118
to top
>emb|AJ544924.2|UBA544924 Pseudomonas sp. 1YB2 C23O gene for catechol 2,3 dioxygenase, strain
            1YB2
          Length = 1556

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 1141 ggttgatgtcctcgaaggtgcggc 1118
to top
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     aaactttggcttataccgag 351
               ||||||||||||||||||||
Sbjct: 5280867 aaactttggcttataccgag 5280886
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>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21,
             complete sequence
          Length = 217310

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   acatatccacaacttttgat 425
             ||||||||||||||||||||
Sbjct: 33747 acatatccacaacttttgat 33728
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>emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 map 22q22.3, complete
             sequence
          Length = 192447

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tctttttcttcatctccttcattt 252
             ||||||||||| ||||||||||||
Sbjct: 83038 tctttttcttcctctccttcattt 83015
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>emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 map 22q22.3, complete
              sequence
          Length = 182974

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tctttttcttcatctccttcattt 252
              ||||||||||| ||||||||||||
Sbjct: 136433 tctttttcttcctctccttcattt 136410
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>emb|BX284112.25| Zebrafish DNA sequence from clone DKEYP-75A7 in linkage group 21,
              complete sequence
          Length = 216476

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    acatatccacaacttttgat 425
              ||||||||||||||||||||
Sbjct: 152189 acatatccacaacttttgat 152208
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>gb|AF525494.1| Pseudomonas fluorescens plasmid pLP6a catechol-2,3-dioxygenase
           (nahH) gene, partial cds; 2-hydroxymuconic semialdehyde
           dehydrogenase (nahI), 2-hydroxymuconic semialdehyde
           hydrolase (nahN), 2-oxypent-4-enoate hydratase (nahL),
           acetaldehyde dehydrogenase (nahO),
           4-hydroxy-2-oxovalerate aldolase (nahM), 4-oxalcrotonate
           decarboxylase (nahK), and 4-oxalocrotonate tautomerase
           (nahJ) genes, complete cds; and methyl-accepting
           chemotaxis protein (nahY) gene, partial cds
          Length = 7152

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 496 ggttgacgtcctcgaaggtgcggc 519
           |||||| |||||||||||||||||
Sbjct: 459 ggttgatgtcctcgaaggtgcggc 436
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>ref|XM_700803.1| PREDICTED: Danio rerio hypothetical protein LOC561174 (LOC561174),
           mRNA
          Length = 778

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 tctcatcatcaaacttcttc 179
           ||||||||||||||||||||
Sbjct: 614 tctcatcatcaaacttcttc 595
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>emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in linkage group 2, complete
              sequence
          Length = 155396

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    tcctctctgattccttcaga 290
              ||||||||||||||||||||
Sbjct: 150067 tcctctctgattccttcaga 150086
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>ref|XM_691529.1| PREDICTED: Danio rerio similar to Dual specificity testis-specific
            protein kinase 2 (Testicular protein kinase 2)
            (LOC568213), mRNA
          Length = 2022

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  tcctctctgattccttcaga 290
            ||||||||||||||||||||
Sbjct: 1747 tcctctctgattccttcaga 1766
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>gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3p, complete sequence
          Length = 193333

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 382    caatgctatcataagcctccttgtacat 409
              |||||||||||| ||| |||||||||||
Sbjct: 136502 caatgctatcatgagcatccttgtacat 136475
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>gb|AC106053.6| Homo sapiens BAC clone RP11-818B6 from 2, complete sequence
          Length = 178810

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 49     acacaagtttggatgatgaaattccaga 76
              ||||||||||| || |||||||||||||
Sbjct: 153957 acacaagtttgaatcatgaaattccaga 153984
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>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence
          Length = 179606

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aaattccagagggacaaaga 86
             ||||||||||||||||||||
Sbjct: 90567 aaattccagagggacaaaga 90548
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>gb|U01825.1|PSU01825 Pseudomonas sp. IC catechol 2,3-dioxygenase (bphE) gene, complete
            cds, and 2-hydroxymuconic semialdehyde dehydrogenase
            (bphG) gene, partial cds
          Length = 1241

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 1064 ggttgatgtcctcgaaggtgcggc 1041
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>gb|AY228547.1| Pseudomonas sp. A2YC1 catechol 2,3-dioxygenase (c23o) gene, complete
            cds; and 2-hydroxymuconic semialdehyde dehydrogenase
            (hmsD) gene, partial cds
          Length = 1498

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 1115 ggttgatgtcctcgaaggtgcggc 1092
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>gb|AF478380.1| Vitis vinifera isolate 1R1 copia-like retrotransposon gag-pol
           polyprotein-like gene, partial sequence
          Length = 1348

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 205 actcgtctgctgtcattgtgctgatctt 232
           |||| ||||||||||||||| |||||||
Sbjct: 652 actcttctgctgtcattgtgatgatctt 625
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>emb|AJ582631.1|PST582631 Pseudomonas stutzeri nahT gene, partial nahH gene, ORF1, tnpA gene,
            partial nahH gene and partial nahI gene, strain AN142
          Length = 4072

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 3890 ggttgatgtcctcgaaggtgcggc 3867
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>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete
              sequence
          Length = 161244

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tccttctctatcctctctga 280
              ||||||||||||||||||||
Sbjct: 153394 tccttctctatcctctctga 153375
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>gb|AF039534.1|AF039534 Pseuodmonas stutzeri transposase-like protein TnpA3 (tnpA3),
            salicylate hydroxylase (nahW), transposase-like protein
            (tnpA2) and regulatory protein (nahR) genes; and
            naphthalene degradation lower-pathway gene cluster (nahG,
            nahT, nahH, nahI, nahN, nahL, nahO, nahM, nahK, and
            nahJ), complete cds
          Length = 15923

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 8499 ggttgatgtcctcgaaggtgcggc 8476
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>dbj|AP006274.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-217F13, chromosome 3,
             complete sequence
          Length = 178968

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tctttttcttcatctccttcattt 252
             ||||||||||| ||||||||||||
Sbjct: 66448 tctttttcttcctctccttcattt 66425
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>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3,
              complete sequence
          Length = 183435

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tctttttcttcatctccttcattt 252
              ||||||||||| ||||||||||||
Sbjct: 161570 tctttttcttcctctccttcattt 161547
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>dbj|AP006272.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-100O24, chromosome 22,
              complete sequence
          Length = 175178

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tctttttcttcatctccttcattt 252
              ||||||||||| ||||||||||||
Sbjct: 105740 tctttttcttcctctccttcattt 105717
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>emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-340L3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188165

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   atctttttcttcatctcctt 247
             ||||||||||||||||||||
Sbjct: 87813 atctttttcttcatctcctt 87794
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>gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, complete sequence
          Length = 217236

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ccagagggacaaagaagtat 91
              ||||||||||||||||||||
Sbjct: 213446 ccagagggacaaagaagtat 213427
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>emb|AL773602.1|HS314N7 Homo sapiens chromosome 21 from PAC RP1-314N7, map 21q22.3
          Length = 121590

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tctttttcttcatctccttcattt 252
              ||||||||||| ||||||||||||
Sbjct: 103933 tctttttcttcctctccttcattt 103910
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 535     ccttccgggcctcctcggagacga 558
               ||||||||||| ||||||||||||
Sbjct: 2113479 ccttccgggccgcctcggagacga 2113502
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>dbj|AP001068.1| Homo sapiens genomic DNA, chromosome 21, clone:KB877C8, MX1-D21S171
             region, complete sequence
          Length = 120832

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tctttttcttcatctccttcattt 252
             ||||||||||| ||||||||||||
Sbjct: 50588 tctttttcttcctctccttcattt 50565
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>dbj|AB001722.1| Pseudomonas stutzeri carbazole catabolic genes, complete cds,
            clone:pPS110
          Length = 3072

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 496  ggttgacgtcctcgaaggtgcggc 519
            |||||| |||||||||||||||||
Sbjct: 1410 ggttgatgtcctcgaaggtgcggc 1387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,637,199
Number of Sequences: 3902068
Number of extensions: 6637199
Number of successful extensions: 145826
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145490
Number of HSP's gapped (non-prelim): 331
length of query: 684
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 661
effective length of database: 17,143,297,704
effective search space: 11331719782344
effective search space used: 11331719782344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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