>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)|
          Length = 267

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +1

Query: 250 PPTVALMAKAPPTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTLTCSSTYP 411
           PPT     K P T+PP  + +    T    PP T+ PT+  T P + T S   P
Sbjct: 212 PPTYTPSPKPPATKPPTPKPTPPTYTPTPKPPATKPPTYTPTPPVSHTPSPPPP 265

>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 40/174 (22%)
 Frame = +1

Query: 166 SEATCVRVPHTSTVQ*DGCVNLSETVCLPPT---VALMAKAPPTEPPLAESSAGQLTKMW 336
           S +  V  PHTS +          T   PP    +     APP  PP             
Sbjct: 116 SVSLLVTRPHTSKL-----ATGDTTSSAPPVQDEITTTKPAPPPPPPAP----------- 159

Query: 337 *PPETQLPTFHLTRPSTLT-------CSSTYPAAMSCFMASA--------------TYGA 453
            PP T++PT   T+  T+T        ++T P   +   A+A              TY  
Sbjct: 160 -PPTTEIPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPPPTTTTPTGPRQVTYSV 218

Query: 454 TGTESP---------DITGD-------HTDWSLCPW*IAGSDTGTVTGSSRYVV 567
           TGT++P         D  G        +  WS+    I+ SD G+V  SS + V
Sbjct: 219 TGTKAPGDIISVTYVDAAGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRV 272

>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 40/174 (22%)
 Frame = +1

Query: 166 SEATCVRVPHTSTVQ*DGCVNLSETVCLPPT---VALMAKAPPTEPPLAESSAGQLTKMW 336
           S +  V  PHTS +          T   PP    +     APP  PP             
Sbjct: 116 SVSLLVTRPHTSKL-----ATGDTTSSAPPVQDEITTTKPAPPPPPPAP----------- 159

Query: 337 *PPETQLPTFHLTRPSTLT-------CSSTYPAAMSCFMASA--------------TYGA 453
            PP T++PT   T+  T+T        ++T P   +   A+A              TY  
Sbjct: 160 -PPTTEIPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPPPTTTTPTGPRQVTYSV 218

Query: 454 TGTESP---------DITGD-------HTDWSLCPW*IAGSDTGTVTGSSRYVV 567
           TGT++P         D  G        +  WS+    I+ SD G+V  SS + V
Sbjct: 219 TGTKAPGDIISVTYVDAAGRRRTQHNVYIPWSMTVTPISQSDVGSVEASSLFRV 272

>PTK1_YEAST (P36002) Serine/threonine-protein kinase PTK1/STK1 (EC 2.7.11.1)|
          Length = 649

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 253 PTVALMAKAPPTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTLTCSSTYPAAMS 423
           PT  ++A +PP  PP     A  L  +   P  QL T  L+     T + + P+A S
Sbjct: 569 PTATVLASSPPPPPPATHVPAEALFTLRETPPPQLATLTLSEEPPATPAPSAPSAPS 625

>PTP99_DROME (P35832) Tyrosine-protein phosphatase 99A precursor (EC 3.1.3.48)|
            (Receptor-linked protein-tyrosine phosphatase 99A)
            (DPTP99A)
          Length = 1301

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
 Frame = +1

Query: 229  LSETVCLPPT------VALMAKAPPTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTL 390
            L+ETV  P T      + +++  PPT  PL+ SS+        PP    PT     P T+
Sbjct: 1094 LNETVSTPSTDTNPSLLPILSLLPPTVAPLSSSSSTT------PPTPSTPT--PQPPQTI 1145

Query: 391  TCSSTYPAAMSCFMASATYGATGTESP 471
              SS  P+ +S  ++S    A    +P
Sbjct: 1146 QLSSHSPSDLSHQISSTVANAASPVTP 1172



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +1

Query: 247  LPPTVALMAKAPPTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTLTCSSTYPAAMSC 426
            LPPTVA ++ +  T PP   +   Q      PP+T   + H     +   SST   A S 
Sbjct: 1116 LPPTVAPLSSSSSTTPPTPSTPTPQ------PPQTIQLSSHSPSDLSHQISSTVANAASP 1169

Query: 427  F---MASATYGATGT 462
                 ASA+ GAT T
Sbjct: 1170 VTPATASASAGATPT 1184

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = +1

Query: 247  LPPTVALMAKAPPTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTLTCSSTYPAAMSC 426
            LPP + + + APP+ P    +++G  T    P  T  P    TR  T T SS+ P   S 
Sbjct: 4241 LPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTR-GTTTGSSSAPTP-ST 4298

Query: 427  FMASATYGATGTESP 471
               + T   T T +P
Sbjct: 4299 VQTTTTSAWTPTPTP 4313

>IQGA1_MOUSE (Q9JKF1) Ras GTPase-activating-like protein IQGAP1|
          Length = 1657

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -1

Query: 443 VADAMKQDIAAGYVLLHVKVDGRVKWKVGSWVSGGYHIFVN 321
           +A+A K+ +AAG        D   KW V  WV GGYH + N
Sbjct: 668 LAEAKKKRLAAG--------DNNSKW-VKHWVKGGYHYYHN 699

>CTL1_MOUSE (Q6X893) Choline transporter-like protein 1 (Solute carrier family|
           44 member 1) (CD92 antigen) (CDw92)
          Length = 653

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 283 PTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTLTCSSTYPAAMSCFMA 435
           P+E  L   S+G   K+  P    +P FH   P  ++C + +  A+  F++
Sbjct: 145 PSEYTLTSKSSGFCPKLPVPASAPIPFFHRCAPVNISCYAKFAEALITFVS 195

>NFASC_HUMAN (O94856) Neurofascin precursor|
          Length = 1347

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
 Frame = +1

Query: 250  PPTVALMAKAPPTEPPLAESSAGQLTK------MW*PPETQLPTFHLTRPSTLTCSSTYP 411
            PP  A    APPT PP    + G ++             T +P      P+T+  ++T  
Sbjct: 1026 PPNEATPTAAPPTLPPTTVGATGAVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTV- 1084

Query: 412  AAMSCFMASATYGATGTESPDITGDHT 492
            A  +   A+AT   T TESP  T   T
Sbjct: 1085 ATTTTTTAAAT---TTTESPPTTTSGT 1108

>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)|
          Length = 2012

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = +1

Query: 280  PPTEPPLAESSAGQLTKMW*PPETQLPTFHLTRPSTLTCSSTYPAAMSCFMAS 438
            PP     A +SA  +   W PP   L    + R  T+ CS  YP  +S F AS
Sbjct: 1191 PPAGVKAAAASASMVFVSWLPP---LKLNGIIRKYTVFCSHPYPTVISEFEAS 1240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,829,843
Number of Sequences: 219361
Number of extensions: 1049162
Number of successful extensions: 3825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3817
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)