ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags13d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472430.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 466 bits (235), Expect = e-128 Identities = 349/387 (90%) Strand = Plus / Minus Query: 249 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 308 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 594 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 535 Query: 309 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 534 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 475 Query: 369 cttgacgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgctt 428 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||| | Sbjct: 474 cttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgatgtcctgcct 415 Query: 429 catggcgtccgccacgtacggcgccaccggcaccgagtccccggacatcaccggcgacca 488 ||||||||||||||||||| || |||| |||||||| || |||||||||||||||||||| Sbjct: 414 catggcgtccgccacgtactgccccacgggcaccgactcgccggacatcaccggcgacca 355 Query: 489 caccgactggtccttgtgcccctggtagatcgccggcagcgacaccggcaccgtcaccgg 548 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 354 caccgacacgtccttgtgcccctggtagatcgccggcagctccaccggcaccgtgatcgg 295 Query: 549 ctcgtcgcggtacgtggtgaaggcgtgcagggtcttgtagtagatgcccacccggtcgtt 608 ||| || | |||||| ||||| ||||||| ||||||||||| | ||||||| |||||| Sbjct: 294 ctcctccctgtacgtcgtgaacacgtgcagcgtcttgtagtacacccccaccctgtcgtt 235 Query: 609 cgggttccgcgacgcgatggtcacctg 635 |||||||| ||||||||| |||||||| Sbjct: 234 cgggttcctcgacgcgatcgtcacctg 208 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 192 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 242 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 663 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 613
>dbj|AK068271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139L19, full insert sequence Length = 1055 Score = 466 bits (235), Expect = e-128 Identities = 349/387 (90%) Strand = Plus / Minus Query: 249 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 308 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 722 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 663 Query: 309 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 662 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 603 Query: 369 cttgacgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgctt 428 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||| | Sbjct: 602 cttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgatgtcctgcct 543 Query: 429 catggcgtccgccacgtacggcgccaccggcaccgagtccccggacatcaccggcgacca 488 ||||||||||||||||||| || |||| |||||||| || |||||||||||||||||||| Sbjct: 542 catggcgtccgccacgtactgccccacgggcaccgactcgccggacatcaccggcgacca 483 Query: 489 caccgactggtccttgtgcccctggtagatcgccggcagcgacaccggcaccgtcaccgg 548 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 482 caccgacacgtccttgtgcccctggtagatcgccggcagctccaccggcaccgtgatcgg 423 Query: 549 ctcgtcgcggtacgtggtgaaggcgtgcagggtcttgtagtagatgcccacccggtcgtt 608 ||| || | |||||| ||||| ||||||| ||||||||||| | ||||||| |||||| Sbjct: 422 ctcctccctgtacgtcgtgaacacgtgcagcgtcttgtagtacacccccaccctgtcgtt 363 Query: 609 cgggttccgcgacgcgatggtcacctg 635 |||||||| ||||||||| |||||||| Sbjct: 362 cgggttcctcgacgcgatcgtcacctg 336 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 192 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 242 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 791 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 ttattctgcacagattcagaa 53 ||||||||||||||||||||| Sbjct: 1001 ttattctgcacagattcagaa 981
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 464 bits (234), Expect = e-127 Identities = 348/386 (90%) Strand = Plus / Plus Query: 249 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 308 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 23051 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 23110 Query: 309 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 23111 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 23170 Query: 369 cttgacgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgctt 428 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||| | Sbjct: 23171 cttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgatgtcctgcct 23230 Query: 429 catggcgtccgccacgtacggcgccaccggcaccgagtccccggacatcaccggcgacca 488 ||||||||||||||||||| || |||| |||||||| || |||||||||||||||||||| Sbjct: 23231 catggcgtccgccacgtactgccccacgggcaccgactcgccggacatcaccggcgacca 23290 Query: 489 caccgactggtccttgtgcccctggtagatcgccggcagcgacaccggcaccgtcaccgg 548 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 23291 caccgacacgtccttgtgcccctggtagatcgccggcagctccaccggcaccgtgatcgg 23350 Query: 549 ctcgtcgcggtacgtggtgaaggcgtgcagggtcttgtagtagatgcccacccggtcgtt 608 ||| || | |||||| ||||| ||||||| ||||||||||| | ||||||| |||||| Sbjct: 23351 ctcctccctgtacgtcgtgaacacgtgcagcgtcttgtagtacacccccaccctgtcgtt 23410 Query: 609 cgggttccgcgacgcgatggtcacct 634 |||||||| ||||||||| ||||||| Sbjct: 23411 cgggttcctcgacgcgatcgtcacct 23436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 192 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 242 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 22982 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 23032 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ttattctgcacagattcagaa 53 ||||||||||||||||||||| Sbjct: 22765 ttattctgcacagattcagaa 22785
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 464 bits (234), Expect = e-127 Identities = 348/386 (90%) Strand = Plus / Plus Query: 249 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 308 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 99345 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 99404 Query: 309 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 99405 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 99464 Query: 369 cttgacgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgctt 428 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||| | Sbjct: 99465 cttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgatgtcctgcct 99524 Query: 429 catggcgtccgccacgtacggcgccaccggcaccgagtccccggacatcaccggcgacca 488 ||||||||||||||||||| || |||| |||||||| || |||||||||||||||||||| Sbjct: 99525 catggcgtccgccacgtactgccccacgggcaccgactcgccggacatcaccggcgacca 99584 Query: 489 caccgactggtccttgtgcccctggtagatcgccggcagcgacaccggcaccgtcaccgg 548 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 99585 caccgacacgtccttgtgcccctggtagatcgccggcagctccaccggcaccgtgatcgg 99644 Query: 549 ctcgtcgcggtacgtggtgaaggcgtgcagggtcttgtagtagatgcccacccggtcgtt 608 ||| || | |||||| ||||| ||||||| ||||||||||| | ||||||| |||||| Sbjct: 99645 ctcctccctgtacgtcgtgaacacgtgcagcgtcttgtagtacacccccaccctgtcgtt 99704 Query: 609 cgggttccgcgacgcgatggtcacct 634 |||||||| ||||||||| ||||||| Sbjct: 99705 cgggttcctcgacgcgatcgtcacct 99730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 192 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 242 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 99276 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 99326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ttattctgcacagattcagaa 53 ||||||||||||||||||||| Sbjct: 99059 ttattctgcacagattcagaa 99079
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 464 bits (234), Expect = e-127 Identities = 348/386 (90%) Strand = Plus / Plus Query: 249 gccgcccaccgtggcgctcatggcgaaggcgccgccgacggagccgccgctggcggagag 308 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 20588717 gccgcccgccgtggcgctcatggcgaaggcgccgccgacgttgccgccgctggcggcgag 20588776 Query: 309 cagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||| || ||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 20588777 cagggccgggcacgtgacgaagaggtggtagccgccggagacccagctgccgaccttcca 20588836 Query: 369 cttgacgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgctt 428 ||||||||||||||||||||||||||||||||||||||| || || |||||||||||| | Sbjct: 20588837 cttgacgcggccgtccaccttgacgtgcagcagcacgtagcccgccgcgatgtcctgcct 20588896 Query: 429 catggcgtccgccacgtacggcgccaccggcaccgagtccccggacatcaccggcgacca 488 ||||||||||||||||||| || |||| |||||||| || |||||||||||||||||||| Sbjct: 20588897 catggcgtccgccacgtactgccccacgggcaccgactcgccggacatcaccggcgacca 20588956 Query: 489 caccgactggtccttgtgcccctggtagatcgccggcagcgacaccggcaccgtcaccgg 548 ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||| Sbjct: 20588957 caccgacacgtccttgtgcccctggtagatcgccggcagctccaccggcaccgtgatcgg 20589016 Query: 549 ctcgtcgcggtacgtggtgaaggcgtgcagggtcttgtagtagatgcccacccggtcgtt 608 ||| || | |||||| ||||| ||||||| ||||||||||| | ||||||| |||||| Sbjct: 20589017 ctcctccctgtacgtcgtgaacacgtgcagcgtcttgtagtacacccccaccctgtcgtt 20589076 Query: 609 cgggttccgcgacgcgatggtcacct 634 |||||||| ||||||||| ||||||| Sbjct: 20589077 cgggttcctcgacgcgatcgtcacct 20589102 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 192 tcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 242 |||||||||||||||||||| | || ||||| |||||||||||||||||| Sbjct: 20588648 tcacacgtcgacggtgcagtccgccgcctgcgcgaacttgagcgagacggt 20588698 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 35046594 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 35046649 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ttattctgcacagattcagaa 53 ||||||||||||||||||||| Sbjct: 20588431 ttattctgcacagattcagaa 20588451
>gb|AY108115.1| Zea mays PCO094434 mRNA sequence Length = 1184 Score = 424 bits (214), Expect = e-115 Identities = 310/342 (90%) Strand = Plus / Minus Query: 294 gccgctggcggagagcagcgcggggcagttgacgaagatgtggtagccgccagagaccca 353 |||||||| || |||||||||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 760 gccgctggtggcgagcagcgcggggcagttgacgaagaggtggtagctgcccgagaccca 701 Query: 354 gctgccgaccttccacttgacgcggccgtccaccttgacgtgcagcagcacgtacccggc 413 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || || Sbjct: 700 gctgccgaccttccacttgacgcggccgtccaccctgacgtggagcagcacgtatcccgc 641 Query: 414 ggcgatgtcctgcttcatggcgtccgccacgtacggcgccaccggcaccgagtccccgga 473 |||||||||||||||||||||||||||||||| ||||||| || |||| ||| || || Sbjct: 640 ctcgatgtcctgcttcatggcgtccgccacgtactgcgccacggggaccgcgtcgcccga 581 Query: 474 catcaccggcgaccacaccgactggtccttgtgcccctggtagatcgccggcagcgacac 533 ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| Sbjct: 580 catgaccggcgaccacaccgacacgtccttgtggccctggtagatcgccggcatcgacac 521 Query: 534 cggcaccgtcaccggctcgtcgcggtacgtggtgaaggcgtgcagggtcttgtagtagat 593 || |||||||||| ||||||||||||||||||||| |||| ||| ||||||||||| | Sbjct: 520 gggtaccgtcaccgcctcgtcgcggtacgtggtgaacgcgtccagcgtcttgtagtacac 461 Query: 594 gcccacccggtcgttcgggttccgcgacgcgatggtcacctg 635 ||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 460 gcccacccgctcgttcgggttccgcgacgcgatcgtcacctg 419 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 191 ctcacacgtcgacggtgcagtaggacggctgcgtgaacttgagcgagacggt 242 ||||||||||||||||||||| || ||| |||||||||||||| |||||||| Sbjct: 890 ctcacacgtcgacggtgcagtcggccgggtgcgtgaacttgagggagacggt 839
>gb|AY107482.1| Zea mays PCO119066 mRNA sequence Length = 1052 Score = 163 bits (82), Expect = 9e-37 Identities = 130/146 (89%) Strand = Plus / Minus Query: 301 gcggagagcagcgcggggcagttgacgaagatgtggtagccgccagagacccagctgccg 360 |||||||||| ||||||||| ||||||||| |||||||| ||| ||||||||||||||| Sbjct: 729 gcggagagcacggcggggcagctgacgaagaggtggtagctgccggagacccagctgccg 670 Query: 361 accttccacttgacgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatg 420 |||||||||||||||||||||||||||||||| |||||| ||| | || ||||||| | Sbjct: 669 accttccacttgacgcggccgtccaccttgacctgcagcgcgacgaagcccgcggcgacg 610 Query: 421 tcctgcttcatggcgtccgccacgta 446 ||||||||||||||||| || ||||| Sbjct: 609 tcctgcttcatggcgtcggcgacgta 584 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 522 cggcagcgacaccggcaccgtcaccggctcgtcgcggtacgtggtgaaggcgtgcagggt 581 |||||| ||||| ||||||||||| | |||||||||||| ||| ||| ||| |||| Sbjct: 508 cggcagagacacgggcaccgtcacggcctcgtcgcggtaggtgacgaacacgtccaggcg 449 Query: 582 cttgtagtagatgcccacccggtcgttcgggtt 614 ||||||| |||||||||| |||||||| ||||| Sbjct: 448 cttgtagaagatgcccacgcggtcgttggggtt 416
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 19974372 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 19974431 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 19974432 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 19974485 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 cgaaggcgccgccgacggagccgc 295 ||||||||| |||||||||||||| Sbjct: 27377743 cgaaggcgcggccgacggagccgc 27377766
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 151973 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 152032 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 152033 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 152086
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 78493 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 78552 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 78553 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 78606
>dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 673 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 614 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 613 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 560
>dbj|AK109400.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D03, full insert sequence Length = 1051 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 652 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 593 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 592 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 539
>dbj|AK104564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D10, full insert sequence Length = 906 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 620 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 561 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 560 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 507
>dbj|AK065946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G21, full insert sequence Length = 1007 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 621 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 562 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 561 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 508
>dbj|AK061396.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E05, full insert sequence Length = 1051 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 652 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 593 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 592 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 539
>dbj|AK060001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G10, full insert sequence Length = 940 Score = 131 bits (66), Expect = 3e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct: 649 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacttg 590 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 589 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 536
>dbj|AK104600.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G02, full insert sequence Length = 988 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttg 372 ||||||||| |||| |||| |||||||| ||| |||||||||||||||||||||||| || Sbjct: 652 gcggggcagctgacaaagaggtggtagctgccggagacccagctgccgaccttccacctg 593 Query: 373 acgcggccgtccaccttgacgtgcagcagcacgtacccggcggcgatgtcctgc 426 ||||||||||| ||||| || |||||| |||||||||||||||| ||||||| Sbjct: 592 acgcggccgtcgaccttcacctgcagcgcgacgtacccggcggcgacgtcctgc 539
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 5239 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 5180 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 5179 cggccgtcgatcttgac 5163
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 1366 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 1425 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 1426 cggccgtcgatcttgac 1442
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2979160 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2979219 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 2979220 cggccgtcgatcttgac 2979236
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2721559 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2721618 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 2721619 cggccgtcgatcttgac 2721635
>dbj|AK119781.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F02, full insert sequence Length = 990 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 711 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 652 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 651 cggccgtcgatcttgac 635
>dbj|AK106091.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B08, full insert sequence Length = 1020 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104479.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F10, full insert sequence Length = 994 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C09, full insert sequence Length = 1020 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E09, full insert sequence Length = 994 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104217.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C11, full insert sequence Length = 1020 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 715 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 656 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 655 cggccgtcgatcttgac 639
>dbj|AK104185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D07, full insert sequence Length = 1021 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 618 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 559 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 558 cggccgtcgatcttgac 542
>dbj|AK070481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048L05, full insert sequence Length = 1056 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 742 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 683 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 682 cggccgtcgatcttgac 666
>dbj|AK070326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I16, full insert sequence Length = 1026 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 716 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 657 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 656 cggccgtcgatcttgac 640
>dbj|AK061582.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H12, full insert sequence Length = 1034 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 631 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 572 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 571 cggccgtcgatcttgac 555
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2730590 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2730649 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 2730650 cggccgtcgatcttgac 2730666
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 2979104 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 2979163 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 2979164 cggccgtcgatcttgac 2979180
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 316 gggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttccacttgacg 375 |||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||| |||| Sbjct: 36942 gggcaggtgacgaagaggtggtagtggccggagatccagctgccgaccttccaccggacg 36883 Query: 376 cggccgtccaccttgac 392 |||||||| | |||||| Sbjct: 36882 cggccgtcgatcttgac 36866
>ref|XM_474420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 557 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 502
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 522 cggcagcgacaccggcaccgtcaccggc 549 |||||||||||||||||||| ||||||| Sbjct: 198562 cggcagcgacaccggcaccggcaccggc 198589
>dbj|AK103610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J15, full insert sequence Length = 1420 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 970 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 915
>dbj|AK069353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D16, full insert sequence Length = 1024 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 593 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 538
>dbj|AK061257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B04, full insert sequence Length = 1027 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Minus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 596 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 541
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 1262 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 1317
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 78262 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 78317
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 313 gcggggcagttgacgaagatgtggtagccgccagagacccagctgccgaccttcca 368 ||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||| Sbjct: 105641 gcggggcagttgacgcggaggtggtagtggccggagatccaggtgccgaccttcca 105696
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 516 gatcgccggcagcgacaccggcaccgtcacc 546 |||| |||||||||||| ||||||||||||| Sbjct: 1103029 gatccccggcagcgacagcggcaccgtcacc 1102999
>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4, complete sequence Length = 205347 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 71 gtgataattatacactatcatatcatg 97 ||||||||||||||||| ||||||||| Sbjct: 46568 gtgataattatacactaacatatcatg 46542
>ref|NM_190382.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 276 ggcgccgccgacggagccgccgctggcggagagc 309 ||||||| ||||| ||||||| |||||||||||| Sbjct: 1179 ggcgccgacgacgaagccgcccctggcggagagc 1212
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 276 ggcgccgccgacggagccgccgctggcggagagc 309 ||||||| ||||| ||||||| |||||||||||| Sbjct: 35161469 ggcgccgacgacgaagccgcccctggcggagagc 35161436
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 276 ggcgccgccgacggagccgccgctggcggagagc 309 ||||||| ||||| ||||||| |||||||||||| Sbjct: 40553 ggcgccgacgacgaagccgcccctggcggagagc 40520
>dbj|AK064237.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A08, full insert sequence Length = 1529 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 276 ggcgccgccgacggagccgccgctggcggagagc 309 ||||||| ||||| ||||||| |||||||||||| Sbjct: 920 ggcgccgacgacgaagccgcccctggcggagagc 953
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 532 accggcaccgtcaccggctcgtcgc 556 |||||||||||||||||| |||||| Sbjct: 3476563 accggcaccgtcaccggcacgtcgc 3476539 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 gcgacaccggcaccgtcaccggctcgtcg 555 |||||||| ||||||||||||||||||| Sbjct: 2805834 gcgacaccaccaccgtcaccggctcgtcg 2805862
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 5249 catggcgaaggcgccgccgtcggag 5273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 taatacgatgtataaaaagta 26 ||||||||||||||||||||| Sbjct: 14816715 taatacgatgtataaaaagta 14816735
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 270 ggcgaaggcgccgccgacggagccg 294 |||||||||||||||| |||||||| Sbjct: 87687 ggcgaaggcgccgccggcggagccg 87663
>gb|AC010040.6| Drosophila melanogaster 3L BAC RP98-13E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159672 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctcctgcaaataattaagagc 139 ||||||||||||||||||||| Sbjct: 68733 ctcctgcaaataattaagagc 68753
>gb|AE012498.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 406 of 460 of the complete genome Length = 12898 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 556 cggtacgtggtgaaggcgtgc 576 ||||||||||||||||||||| Sbjct: 9105 cggtacgtggtgaaggcgtgc 9085
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 taatacgatgtataaaaagta 26 ||||||||||||||||||||| Sbjct: 116053 taatacgatgtataaaaagta 116033
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 556 cggtacgtggtgaaggcgtgc 576 ||||||||||||||||||||| Sbjct: 4549626 cggtacgtggtgaaggcgtgc 4549606 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 aggcgccgccgacggagccgccgc 298 ||||||||||||||| |||||||| Sbjct: 4232795 aggcgccgccgacggtgccgccgc 4232772
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 21548623 catggcgaaggcgccgccgtcggag 21548647 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 21540115 catggcgaaggcgccgccgtcggag 21540091 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 21463809 catggcgaaggcgccgccgtcggag 21463833
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 taatacgatgtataaaaagta 26 ||||||||||||||||||||| Sbjct: 14811249 taatacgatgtataaaaagta 14811269
>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone BACR32F24, complete sequence Length = 162307 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 ggcagcgacaccggcaccgtcaccg 547 ||||||||||||||||||| ||||| Sbjct: 82791 ggcagcgacaccggcaccggcaccg 82767
>gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 from chromosome unknown, complete sequence Length = 183178 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 ttctgcacagattcagaaaca 56 ||||||||||||||||||||| Sbjct: 38860 ttctgcacagattcagaaaca 38880
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 110233 catggcgaaggcgccgccgtcggag 110257 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 101725 catggcgaaggcgccgccgtcggag 101701 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 25419 catggcgaaggcgccgccgtcggag 25443
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 catggcgaaggcgccgccgacggag 291 ||||||||||||||||||| ||||| Sbjct: 80914 catggcgaaggcgccgccgtcggag 80938
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 cgtacccggcggcgatgtcct 424 ||||||||||||||||||||| Sbjct: 2045261 cgtacccggcggcgatgtcct 2045241
>ref|XM_313086.2| Anopheles gambiae str. PEST ENSANGP00000012820 (ENSANGG00000010331), partial mRNA Length = 3651 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 517 atcgccggcagcgacaccggcaccg 541 |||||||||| |||||||||||||| Sbjct: 573 atcgccggcaccgacaccggcaccg 597
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete sequence Length = 281917 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 ctcctgcaaataattaagagc 139 ||||||||||||||||||||| Sbjct: 255847 ctcctgcaaataattaagagc 255867
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete sequence Length = 290619 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 523 ggcagcgacaccggcaccgtcaccg 547 ||||||||||||||||||| ||||| Sbjct: 119385 ggcagcgacaccggcaccggcaccg 119361
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 525 cagcgacaccggcaccgtcaccggc 549 |||||||||||||| |||||||||| Sbjct: 6052181 cagcgacaccggcaacgtcaccggc 6052205 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 acggcgccaccggcaccgag 465 |||||||||||||||||||| Sbjct: 84589 acggcgccaccggcaccgag 84570
>gb|AC002981.1|AC002981 Homo sapiens Xp22 BAC GS279A12 (Genome Systems) complete sequence Length = 153568 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 ggcgatgtcctgcttcatggc 434 ||||||||||||||||||||| Sbjct: 26308 ggcgatgtcctgcttcatggc 26328
>gb|DQ215565.1| Taeniopygia guttata clone 0058P0037F07 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 1 7-like mRNA, complete sequence Length = 357 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 cggcagcgacaccggcaccgtcaccggc 549 ||||| |||||||||||||| ||||||| Sbjct: 12 cggcaccgacaccggcaccggcaccggc 39
>gb|BT018714.1| Zea mays clone EL01N0517A06.d mRNA sequence Length = 1863 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggcgctcatggcgaaggcgc 280 |||||||||||||||||||| Sbjct: 333 ggcgctcatggcgaaggcgc 314
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cccggcggcgatgtcctgct 427 |||||||||||||||||||| Sbjct: 1250514 cccggcggcgatgtcctgct 1250495
>ref|XM_420079.1| PREDICTED: Gallus gallus similar to apoptosis-associated tyrosine kinase (LOC422076), mRNA Length = 3489 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 522 cggcagcgacaccggcaccgtcaccggc 549 ||||| |||||||||||||| ||||||| Sbjct: 2826 cggcaccgacaccggcaccgacaccggc 2853
>ref|XM_324403.1| Neurospora crassa OR74A predicted protein (NCU05047.1) partial mRNA Length = 8979 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 528 cgacaccggcaccgtcaccggctc 551 |||||||||||||| ||||||||| Sbjct: 7868 cgacaccggcaccggcaccggctc 7891
>ref|XM_951328.1| Neurospora crassa OR74A hypothetical protein (NCU05047.1) partial mRNA Length = 8979 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 528 cgacaccggcaccgtcaccggctc 551 |||||||||||||| ||||||||| Sbjct: 7868 cgacaccggcaccggcaccggctc 7891
>ref|XM_843467.1| PREDICTED: Canis familiaris similar to Tumor necrosis factor receptor superfamily member 18 precursor (Glucocorticoid-induced TNFR-related protein) (Activation-inducible TNFR family receptor) (LOC606971), mRNA Length = 684 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gccgccagagacccagctgc 358 |||||||||||||||||||| Sbjct: 552 gccgccagagacccagctgc 571
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 522 cggcagcgacaccggcaccgtcaccggc 549 |||||||| ||||||||||| ||||||| Sbjct: 242039 cggcagcggcaccggcaccggcaccggc 242012
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 521 ccggcagcgacaccggcaccgtcaccggctcg 552 |||||| || ||||||||||| |||||||||| Sbjct: 214609 ccggcaccggcaccggcaccggcaccggctcg 214640
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tcaccggcgaccacaccgac 495 |||||||||||||||||||| Sbjct: 84907 tcaccggcgaccacaccgac 84888
>gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of the complete genome Length = 11211 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ctgccgaccttccacttgac 374 |||||||||||||||||||| Sbjct: 8940 ctgccgaccttccacttgac 8959
>gb|AE012165.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 73 of 460 of the complete genome Length = 11416 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 aggcgccgccgacggagccgccgc 298 ||||||||||||||| |||||||| Sbjct: 8732 aggcgccgccgacggtgccgccgc 8755
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ctgcttgccgcccaccgtgg 262 |||||||||||||||||||| Sbjct: 1415469 ctgcttgccgcccaccgtgg 1415488
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccgtccaccttgacgtgcag 398 |||||||||||||||||||| Sbjct: 1599654 ccgtccaccttgacgtgcag 1599635
>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence Length = 185573 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aattatacactatcatatca 95 |||||||||||||||||||| Sbjct: 42350 aattatacactatcatatca 42331
>gb|M81648.1|XANXPSDMN Xanthomonas campestris campestris XpsM (xpsM), XpsN (xpsN), and XpsD precursor (xpsD) genes, complete cds Length = 4832 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 aggcgccgccgacggagccgccgc 298 ||||||||||||||| |||||||| Sbjct: 1951 aggcgccgccgacggtgccgccgc 1974
>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1197_E09 Length = 67368 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 cgaaggcgccgccgacggagccgc 295 ||||||||| |||||||||||||| Sbjct: 23681 cgaaggcgcggccgacggagccgc 23704
>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20 Length = 74452 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 cgacaccggcaccgtcaccggctc 551 |||||||||||||| ||||||||| Sbjct: 56766 cgacaccggcaccggcaccggctc 56743
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 cgaaggcgccgccgacggagccgc 295 ||||||||| |||||||||||||| Sbjct: 92676 cgaaggcgcggccgacggagccgc 92699
>gb|AE005097.1| Halobacterium sp. NRC-1 section 128 of 170 of the complete genome Length = 16069 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 525 cagcgacaccggcaccgtcaccggctcg 552 ||||||||||| ||||||| |||||||| Sbjct: 849 cagcgacaccgacaccgtccccggctcg 876
>ref|XM_552140.1| Anopheles gambiae str. PEST ENSANGP00000027620 (ENSANGG00000023049), partial mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 gccggcagcgacaccggcaccgtc 543 |||||||||||| ||||||||||| Sbjct: 284 gccggcagcgactccggcaccgtc 261
>dbj|AK110845.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B11, full insert sequence Length = 2070 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cgaaggcgccgccgacggagccgc 295 ||||||||| |||||||||||||| Sbjct: 411 cgaaggcgcggccgacggagccgc 388
>dbj|AK109266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B07, full insert sequence Length = 842 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cgaaggcgccgccgacggagccgc 295 ||||||||| |||||||||||||| Sbjct: 408 cgaaggcgcggccgacggagccgc 385
>gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aattatacactatcatatca 95 |||||||||||||||||||| Sbjct: 20105 aattatacactatcatatca 20124
>emb|BX548062.37| Zebrafish DNA sequence from clone CH211-223K23 in linkage group 20, complete sequence Length = 89039 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ataattatacactatcatatcatg 97 ||||||||||| |||||||||||| Sbjct: 22065 ataattatacattatcatatcatg 22088
>emb|BX537358.5| Zebrafish DNA sequence from clone DKEY-98L9 in linkage group 4, complete sequence Length = 230105 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ataattatacactatcatatcatg 97 |||||||||||||| ||||||||| Sbjct: 23419 ataattatacactaacatatcatg 23396
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 cccggcggcgatgtcctgct 427 |||||||||||||||||||| Sbjct: 2577001 cccggcggcgatgtcctgct 2577020
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 531 caccggcaccgtcaccggctcgtcgcgg 558 |||||||||||| | ||||||||||||| Sbjct: 3061787 caccggcaccgtgaacggctcgtcgcgg 3061814
>gb|M25247.1|PSEIAMA Pseudomonas sp. isoamylase gene, complete cds Length = 2625 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cgacaccggcaccgtcaccg 547 |||||||||||||||||||| Sbjct: 498 cgacaccggcaccgtcaccg 479
>gb|J03871.1|PSEIAM P.amyloderamosa isoamylase gene, complete cds Length = 3048 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 cgacaccggcaccgtcaccg 547 |||||||||||||||||||| Sbjct: 724 cgacaccggcaccgtcaccg 705 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,742,487 Number of Sequences: 3902068 Number of extensions: 3742487 Number of successful extensions: 105354 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103316 Number of HSP's gapped (non-prelim): 2036 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
