>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
          Length = 1450

 Score =  224 bits (113), Expect = 6e-56
 Identities = 140/148 (94%), Gaps = 2/148 (1%)
 Strand = Plus / Minus

                                                                        
Query: 5    aaagcgctacaaagtatcccacggcgatgntgntcttctacacacagtaactngncaagt 64
            |||||||||||||| ||||||||| |||| || ||||||||||||||||||| | |||||
Sbjct: 1404 aaagcgctacaaag-atcccacggtgatgttgttcttctacacacagtaacttgtcaagt 1346

                                                                        
Query: 65   ttctgatacacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcag 124
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 ttctgat-cacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcag 1287

                                        
Query: 125  cgcaaaggcaaaggcagnctcctctctt 152
            ||||||||||||||||| ||||||||||
Sbjct: 1286 cgcaaaggcaaaggcagcctcctctctt 1259

>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
          Length = 1472

 Score =  224 bits (113), Expect = 6e-56
 Identities = 140/148 (94%), Gaps = 2/148 (1%)
 Strand = Plus / Minus

                                                                        
Query: 5    aaagcgctacaaagtatcccacggcgatgntgntcttctacacacagtaactngncaagt 64
            |||||||||||||| ||||||||| |||| || ||||||||||||||||||| | |||||
Sbjct: 1396 aaagcgctacaaag-atcccacggtgatgttgttcttctacacacagtaacttgtcaagt 1338

                                                                        
Query: 65   ttctgatacacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcag 124
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 ttctgat-cacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcag 1279

                                        
Query: 125  cgcaaaggcaaaggcagnctcctctctt 152
            ||||||||||||||||| ||||||||||
Sbjct: 1278 cgcaaaggcaaaggcagcctcctctctt 1251

>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete
             sequence
          Length = 185717

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acacaaaaaggggaacatca 91
             ||||||||||||||||||||
Sbjct: 48947 acacaaaaaggggaacatca 48928

>emb|AL691452.10| Human DNA sequence from clone RP11-78B10 on chromosome 1 Contains the
             3' end of the CR2 gene for complement component
             (3d/Epstein Barr virus) receptor 2, the CR1 gene for
             complement component (3b/4b) receptor 1, including Knops
             blood group system, a membrane cofactor protein (CD46,
             trophoblast-lymphocyte cross-reactive antigen) (MCP)
             pseudogene, a novel gene and the 5' end of the CR1L gene
             for complement component (3b/4b) receptor 1-like, complete
             sequence
          Length = 108290

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acacaaaaaggggaacatca 91
             ||||||||||||||||||||
Sbjct: 82795 acacaaaaaggggaacatca 82776



 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acacaaaaaggggaacatca 91
             ||||||||||||||||||||
Sbjct: 64240 acacaaaaaggggaacatca 64221

>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains the 3'
              part of a novel gene, complete sequence
          Length = 157929

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     acacaaaaaggggaacatca 91
              ||||||||||||||||||||
Sbjct: 104188 acacaaaaaggggaacatca 104207

>emb|AL355852.23| Human DNA sequence from clone RP11-403E24 on chromosome X Contains gene
             FLJ39827 and a CpG island, complete sequence
          Length = 128765

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    acacaaaaaggggaacatca 91
             ||||||||||||||||||||
Sbjct: 46259 acacaaaaaggggaacatca 46240

>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   ctggcagcagcgcaaaggca 134
             ||||||||||||||||||||
Sbjct: 63820 ctggcagcagcgcaaaggca 63839

>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence
          Length = 38975

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 118 gcagcagcgcaaaggcaaaggcag 141
           ||||||||||| ||||||||||||
Sbjct: 416 gcagcagcgcagaggcaaaggcag 439

>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
              sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    ctggcagcagcgcaaaggca 134
              ||||||||||||||||||||
Sbjct: 168075 ctggcagcagcgcaaaggca 168056

>dbj|AP002985.2| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2542M24, complete
              sequence
          Length = 205152

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     acacaaaaaggggaacatca 91
              ||||||||||||||||||||
Sbjct: 148482 acacaaaaaggggaacatca 148463

>gb|AC115784.9| Mus musculus chromosome 15, clone RP23-170J10, complete sequence
          Length = 212803

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 99  agacaactaataaatcctg 117
           |||||||||||||||||||
Sbjct: 919 agacaactaataaatcctg 937

>gb|AC093136.3| Pan troglodytes clone RP43-116L11, complete sequence
          Length = 179629

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 80     aggggaacatcataatgagagac 102
              ||||||||| |||||||||||||
Sbjct: 125083 aggggaacagcataatgagagac 125105

>gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237374

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 116    tggcagcagcgcaaaggcaaagg 138
              |||||||||| ||||||||||||
Sbjct: 230694 tggcagcagcacaaaggcaaagg 230672

>gb|AC126249.4| Mus musculus BAC clone RP23-412I9 from chromosome 15, complete sequence
          Length = 190037

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 77     aaaaggggaacatcataatgaga 99
              ||||||||| |||||||||||||
Sbjct: 112619 aaaaggggatcatcataatgaga 112597

>gb|AC115110.3| Homo sapiens BAC clone RP11-192P23 from 4, complete sequence
          Length = 171128

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    caaaaaggggaacatcata 93
             |||||||||||||||||||
Sbjct: 87274 caaaaaggggaacatcata 87292

>gb|AC115291.7| Mus musculus BAC clone RP23-65P2 from 15, complete sequence
          Length = 237119

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     agacaactaataaatcctg 117
              |||||||||||||||||||
Sbjct: 133262 agacaactaataaatcctg 133280

>emb|CR790378.10| Zebrafish DNA sequence from clone DKEY-112E17 in linkage group 5,
              complete sequence
          Length = 160791

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     aaaaaggggaacatcataa 94
              |||||||||||||||||||
Sbjct: 149298 aaaaaggggaacatcataa 149316

>gb|AF253470.1| Danio rerio myogenic regulatory factor myf5 (MYF5) gene, complete cds
          Length = 3831

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 110  aaatcctggcagcagcgca 128
            |||||||||||||||||||
Sbjct: 2322 aaatcctggcagcagcgca 2304

>gb|AC093582.3| Homo sapiens BAC clone RP13-254B10 from 7, complete sequence
          Length = 91224

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 80    aggggaacatcataatgagagac 102
             ||||||||| |||||||||||||
Sbjct: 17724 aggggaacagcataatgagagac 17702

>emb|AL160166.10| Human DNA sequence from clone RP11-159N19 on chromosome 9, complete
              sequence
          Length = 156964

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 68     tgatacacaaaaaggggaa 86
              |||||||||||||||||||
Sbjct: 129960 tgatacacaaaaaggggaa 129942

>emb|AJ308546.1|FRU308546 Fugu rubripes mrf4 gene for myogenic regulatory factor 4 and myf5
            gene for myogenic regulatory factor 5
          Length = 10681

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 110  aaatcctggcagcagcgca 128
            |||||||||||||||||||
Sbjct: 7035 aaatcctggcagcagcgca 7017

>gb|AC183380.3| Pan troglodytes BAC clone CH251-605G19 from chromosome 7, complete
            sequence
          Length = 223844

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 80   aggggaacatcataatgagagac 102
            ||||||||| |||||||||||||
Sbjct: 1564 aggggaacagcataatgagagac 1542

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 122    cagcgcaaaggcaaaggca 140
              |||||||||||||||||||
Sbjct: 209626 cagcgcaaaggcaaaggca 209644

>gb|AC100770.2| Homo sapiens chromosome 11, clone RP11-46P12, complete sequence
          Length = 165585

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 71    tacacaaaaaggggaacatcata 93
             |||||| ||||||||||||||||
Sbjct: 80920 tacacagaaaggggaacatcata 80898

>gb|AC090592.5| Homo sapiens chromosome 11, clone RP11-405K6, complete sequence
          Length = 168469

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 71    tacacaaaaaggggaacatcata 93
             |||||| ||||||||||||||||
Sbjct: 40526 tacacagaaaggggaacatcata 40504

>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete sequence
          Length = 217260

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 80     aggggaacatcataatgagagac 102
              ||||||||| |||||||||||||
Sbjct: 186046 aggggaacagcataatgagagac 186024

>dbj|AB100875.1| Mus musculus Notch1 gene, deletion junction, cell_line:TL7
          Length = 1188

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 106 taataaatcctggcagcag 124
           |||||||||||||||||||
Sbjct: 879 taataaatcctggcagcag 897

>dbj|AB100603.1| Mus musculus Notch1 gene for transmembrane receptor Notch1, complete
             cds
          Length = 60667

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   taataaatcctggcagcag 124
             |||||||||||||||||||
Sbjct: 59519 taataaatcctggcagcag 59537

>emb|BX537156.5| Zebrafish DNA sequence from clone CH211-91G3 in linkage group 4,
             complete sequence
          Length = 117987

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   aaatcctggcagcagcgca 128
             |||||||||||||||||||
Sbjct: 53985 aaatcctggcagcagcgca 54003

>emb|AL732541.11| Mouse DNA sequence from clone RP23-306D20 on chromosome 2, complete
             sequence
          Length = 213918

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   taataaatcctggcagcag 124
             |||||||||||||||||||
Sbjct: 69188 taataaatcctggcagcag 69206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,112,501
Number of Sequences: 3902068
Number of extensions: 1112501
Number of successful extensions: 100791
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100691
Number of HSP's gapped (non-prelim): 96
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)