| Clone Name | rbags13d01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF005993.1|AF005993 Triticum aestivum 70 kDa heat shock protein (TaHSP70d) mRNA, complete cds Length = 2311 Score = 101 bits (51), Expect = 6e-19 Identities = 105/123 (85%), Gaps = 4/123 (3%) Strand = Plus / Minus Query: 11 actccatccaaccactattactacttcctgctacatgacacgacgacaaacgactgacac 70 |||||||| ||| |||| |||||||||| |||| ||||||| |||||| ||||||||||| Sbjct: 2212 actccatcgaacgactactactacttccagctagatgacacaacgacagacgactgacac 2153 Query: 71 caccgagcagcatncaaaggac----accgaaacagaacacccatcaagttgcgcgcaga 126 |||||||| |||| |||||||| ||||| |||| ||||||||||| ||||||||| Sbjct: 2152 caccgagcggcatccaaaggacggacaccgagacagcgaacccatcaagtagcgcgcaga 2093 Query: 127 ccg 129 ||| Sbjct: 2092 ccg 2090
>gb|AY118856.1| Drosophila melanogaster GM21245 full insert cDNA Length = 1153 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ccactattactacttcctgc 41 |||||||||||||||||||| Sbjct: 978 ccactattactacttcctgc 959
>ref|NM_175980.1| Drosophila melanogaster CG7102-RA (CG7102), mRNA Length = 2054 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ccactattactacttcctgc 41 |||||||||||||||||||| Sbjct: 1894 ccactattactacttcctgc 1875
>gb|AY051920.1| Drosophila melanogaster LD40565 full length cDNA Length = 2089 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ccactattactacttcctgc 41 |||||||||||||||||||| Sbjct: 1894 ccactattactacttcctgc 1875
>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone BACR31D05, complete sequence Length = 172633 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ccactattactacttcctgc 41 |||||||||||||||||||| Sbjct: 92109 ccactattactacttcctgc 92128
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ccactattactacttcctgc 41 |||||||||||||||||||| Sbjct: 62499 ccactattactacttcctgc 62518
>gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183105 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 43 acatgacacgacgacaaacgact 65 |||||||| |||||||||||||| Sbjct: 146525 acatgacaagacgacaaacgact 146547
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 caaaacaactccatccaac 22 ||||||||||||||||||| Sbjct: 15576301 caaaacaactccatccaac 15576319
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 caaaacaactccatccaac 22 ||||||||||||||||||| Sbjct: 103861 caaaacaactccatccaac 103879
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 43 acatgacacgacgacaaacgact 65 |||||||| |||||||||||||| Sbjct: 145323 acatgacaagacgacaaacgact 145301 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 911,637 Number of Sequences: 3902068 Number of extensions: 911637 Number of successful extensions: 65002 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64975 Number of HSP's gapped (non-prelim): 27 length of query: 149 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 128 effective length of database: 17,151,101,840 effective search space: 2195341035520 effective search space used: 2195341035520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)