| Clone Name | rbags12n24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC013410.5| Homo sapiens BAC clone RP11-495I2 from 2, complete sequence Length = 200900 Score = 42.1 bits (21), Expect = 0.39 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ggagaatggagcttcacaaagggct 116 |||||||| |||||||||||||||| Sbjct: 168218 ggagaatgcagcttcacaaagggct 168194
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ataaactaaaccaagcataa 45 |||||||||||||||||||| Sbjct: 286089 ataaactaaaccaagcataa 286070
>gb|AC068496.7| Mus musculus chromosome 3 clone RP23-75F13 clone RP23-75F13, complete sequence Length = 136268 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tgaactacagacaattaggc 24 |||||||||||||||||||| Sbjct: 136006 tgaactacagacaattaggc 135987
>gb|AC158937.4| Mus musculus chromosome 3, clone RP23-290L18, complete sequence Length = 196087 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tgaactacagacaattaggc 24 |||||||||||||||||||| Sbjct: 34378 tgaactacagacaattaggc 34397
>gb|AC073883.34| Mus musculus strain C57BL/6J chromosome 3 clone rp23-71e13, complete sequence Length = 213482 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tgaactacagacaattaggc 24 |||||||||||||||||||| Sbjct: 210525 tgaactacagacaattaggc 210506
>emb|AL133231.15| Human DNA sequence from clone RP5-867F11 on chromosome 20 Contains the TCF15 gene for transcription factor 15 (basic helix-loop-helix) and a CpG island, complete sequence Length = 50488 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 gcataacaaaacaccctaa 58 ||||||||||||||||||| Sbjct: 50166 gcataacaaaacaccctaa 50148
>emb|BX036070.1|CNS08ZZU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA7CH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1024 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aagtgctgcgcaagaagaa 75 ||||||||||||||||||| Sbjct: 293 aagtgctgcgcaagaagaa 311
>emb|BX025180.1|CNS08RLC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38CD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aagtgctgcgcaagaagaa 75 ||||||||||||||||||| Sbjct: 489 aagtgctgcgcaagaagaa 507
>emb|BX019512.1|CNS08N7W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 897 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aagtgctgcgcaagaagaa 75 ||||||||||||||||||| Sbjct: 277 aagtgctgcgcaagaagaa 295
>emb|BX013422.1|CNS08IIQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 817 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aagtgctgcgcaagaagaa 75 ||||||||||||||||||| Sbjct: 269 aagtgctgcgcaagaagaa 287
>emb|BX010150.1|CNS08FZU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 926 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aagtgctgcgcaagaagaa 75 ||||||||||||||||||| Sbjct: 267 aagtgctgcgcaagaagaa 285
>gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225564 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 gcattggggagaatggagc 103 ||||||||||||||||||| Sbjct: 170482 gcattggggagaatggagc 170500
>emb|BX324004.6| Zebrafish DNA sequence from clone CH211-284O17 in linkage group 12, complete sequence Length = 136645 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 tataaactaaaccaagcat 43 ||||||||||||||||||| Sbjct: 106337 tataaactaaaccaagcat 106319
>emb|BX649498.5| Zebrafish DNA sequence from clone DKEY-172F5 in linkage group 6, complete sequence Length = 91141 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 actacagacaattaggcta 26 ||||||||||||||||||| Sbjct: 30084 actacagacaattaggcta 30102
>ref|NM_142847.1| Drosophila melanogaster CG6660-RA (CG6660), mRNA Length = 819 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 agtgctgcgcaagaagaac 76 ||||||||||||||||||| Sbjct: 396 agtgctgcgcaagaagaac 414
>gb|BT023370.1| Drosophila melanogaster IP10355 full insert cDNA Length = 1207 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 agtgctgcgcaagaagaac 76 ||||||||||||||||||| Sbjct: 595 agtgctgcgcaagaagaac 613
>gb|BT023270.1| Drosophila melanogaster IP10055 full insert cDNA Length = 1311 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 agtgctgcgcaagaagaac 76 ||||||||||||||||||| Sbjct: 692 agtgctgcgcaagaagaac 710
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 17 aattaggctataaactaaaccaa 39 ||||||||||||||| ||||||| Sbjct: 23461346 aattaggctataaaccaaaccaa 23461324
>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR01K08, complete sequence Length = 177127 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 agtgctgcgcaagaagaac 76 ||||||||||||||||||| Sbjct: 15848 agtgctgcgcaagaagaac 15866
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 17 aattaggctataaactaaaccaa 39 ||||||||||||||| ||||||| Sbjct: 24651 aattaggctataaaccaaaccaa 24629
>emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 in linkage group 12, complete sequence Length = 203958 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 tataaactaaaccaagcat 43 ||||||||||||||||||| Sbjct: 99012 tataaactaaaccaagcat 99030
>emb|BX255933.7| Zebrafish DNA sequence from clone DKEY-38L7 in linkage group 6, complete sequence Length = 231623 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 actacagacaattaggcta 26 ||||||||||||||||||| Sbjct: 75123 actacagacaattaggcta 75141
>ref|XM_321707.2| Anopheles gambiae str. PEST ENSANGP00000015783 (ENSANGG00000013294), partial mRNA Length = 1770 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aagtgctgcgcaagaagaa 75 ||||||||||||||||||| Sbjct: 1046 aagtgctgcgcaagaagaa 1064
>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the complete sequence Length = 233356 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 agtgctgcgcaagaagaac 76 ||||||||||||||||||| Sbjct: 43746 agtgctgcgcaagaagaac 43764 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 961,918 Number of Sequences: 3902068 Number of extensions: 961918 Number of successful extensions: 78124 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78065 Number of HSP's gapped (non-prelim): 59 length of query: 131 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 110 effective length of database: 17,151,101,840 effective search space: 1886621202400 effective search space used: 1886621202400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)