ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12n21 |
|---|---|
| Clone Library Name | barley_pub |
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 229 bits (584), Expect = 4e-60 Identities = 114/122 (93%), Positives = 116/122 (95%) Frame = -1 Query: 547 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIPGPEGVRGRNSDNTLIKE 368 LRLTKSDFREPVNIGSDEMVSMNEMAEIVL FENKQLPI HIPGPEGVRGRNSDNTLIKE Sbjct: 250 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPEGVRGRNSDNTLIKE 309 Query: 367 KLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGAXVSAYGSSKVCTTQAPVQLGSLRAADG 188 KLGWAPTMRLKDGLRITYFWIKEQLEKEK+EG +SAYGSSKV TQAPVQLGSLRAADG Sbjct: 310 KLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSAYGSSKVVQTQAPVQLGSLRAADG 369 Query: 187 KE 182 KE Sbjct: 370 KE 371
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 219 bits (557), Expect = 5e-57 Identities = 104/122 (85%), Positives = 115/122 (94%) Frame = -1 Query: 547 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIPGPEGVRGRNSDNTLIKE 368 LRLTKSDFREPVNIGSDEMVSMNEMAEI+L FE+++LPI HIPGPEGVRGRNSDNTLIKE Sbjct: 257 LRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPEGVRGRNSDNTLIKE 316 Query: 367 KLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGAXVSAYGSSKVCTTQAPVQLGSLRAADG 188 KLGWAPTM+LKDGLR TYFWIKEQ+EKEK++G ++ YGSSKV +TQAPVQLGSLRAADG Sbjct: 317 KLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVVSTQAPVQLGSLRAADG 376 Query: 187 KE 182 KE Sbjct: 377 KE 378
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 216 bits (549), Expect = 4e-56 Identities = 106/122 (86%), Positives = 113/122 (92%) Frame = -1 Query: 547 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIPGPEGVRGRNSDNTLIKE 368 LRLTKSDFREPVNIGSDEMVSMNEMAE+VL FE K+LPI HIPGPEGVRGRNSDN LIKE Sbjct: 256 LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKE 315 Query: 367 KLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGAXVSAYGSSKVCTTQAPVQLGSLRAADG 188 KLGWAP MRLK+GLRITYFWIKEQ+EKEK++G+ VS YGSSKV TQAPVQLGSLRAADG Sbjct: 316 KLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADG 375 Query: 187 KE 182 KE Sbjct: 376 KE 377
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 48.9 bits (115), Expect = 9e-06 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%) Frame = -1 Query: 520 EPVNIGSDEMVSMNEMAEIV---LGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAP 350 E VN+GS V++ E+AE+V +GF+ K + P+G + D++ + LGW P Sbjct: 248 EHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDGTPRKLMDSSKLAS-LGWTP 304 Query: 349 TMRLKDGLRITYFWIKEQLEKEK 281 + LKDGL TY W E + ++K Sbjct: 305 KISLKDGLSQTYEWYLENVVQKK 327
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 47.8 bits (112), Expect = 2e-05 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 3/83 (3%) Frame = -1 Query: 520 EPVNIGSDEMVSMNEMAEIV---LGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAP 350 E VN+GS V++ E+AE+V +GF+ K + P+G + D++ I+E +GW P Sbjct: 248 EHVNVGSGSEVTIKELAELVKEVVGFQGKL--VWDSSKPDGTPRKLMDSSKIQE-MGWKP 304 Query: 349 TMRLKDGLRITYFWIKEQLEKEK 281 + LK+GL TY W E + K Sbjct: 305 KVPLKEGLVETYKWYVENVISAK 327
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 45.4 bits (106), Expect = 1e-04 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%) Frame = -1 Query: 520 EPVNIGSDEMVSMNEMAEIV---LGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAP 350 E VNIGS + V++ E+AE+V +GFE K P+G + D++ + LGW P Sbjct: 234 EHVNIGSGQEVTIRELAELVKEVVGFEGKLG--WDCTKPDGTPRKLMDSSKLAS-LGWTP 290 Query: 349 TMRLKDGLRITYFW 308 + L+DGL TY W Sbjct: 291 KVSLRDGLSQTYDW 304
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 44.7 bits (104), Expect = 2e-04 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Frame = -1 Query: 520 EPVNIGSDEMVSMNEMAEIVLGFENKQLPIX-HIPGPEGVRGRNSDNTLIKEKLGWAPTM 344 E VN+GS E V++ E+AE V G + + PEGV R D+ ++ KLGW P + Sbjct: 264 EHVNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMR-KLGWEPRV 322 Query: 343 RLKDGLRITY-FWIKEQ 296 L+DG++ Y F+++ + Sbjct: 323 ALRDGIQDLYRFYLRHE 339
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 40.0 bits (92), Expect = 0.004 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIP-GPEGVRGRNSDNTLIKEK 365 L S+ PVN+G+ E ++ E A+++ + I +P + + R D K Sbjct: 310 LMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLL 369 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLEKE 284 LGW P + L++GL T + +LE + Sbjct: 370 LGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.6 bits (83), Expect = 0.047 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIP-GPEGVRGRNSDNTLIKEK 365 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLE 290 LGW P + L++GL + +++LE Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.6 bits (83), Expect = 0.047 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIP-GPEGVRGRNSDNTLIKEK 365 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLE 290 LGW P + L++GL + +++LE Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.6 bits (83), Expect = 0.047 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIP-GPEGVRGRNSDNTLIKEK 365 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLE 290 LGW P + L++GL + +++LE Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 36.6 bits (83), Expect = 0.047 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIP-GPEGVRGRNSDNTLIKEK 365 L S+ PVN+G+ E ++ E A+++ I + + + R D K Sbjct: 312 LMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM 371 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLE 290 LGW P + L++GL + +++LE Sbjct: 372 LGWEPVVPLEEGLNKAIHYFRKELE 396
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 36.2 bits (82), Expect = 0.062 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -1 Query: 520 EPVNIGSDEMVSMNEMAEIV---LGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAP 350 E VNIG+ + S+NE+ +I+ +GF + + + EG R + E LGW P Sbjct: 228 EIVNIGTGKETSVNELFDIIKHEIGFRGEAI---YDKPREGEVYRIYLDIKKAESLGWKP 284 Query: 349 TMRLKDGLRITYFWIK 302 + LK+G++ W+K Sbjct: 285 EIDLKEGIKRVVNWMK 300
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 36.2 bits (82), Expect = 0.062 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 3/98 (3%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLG-FENKQLPIXHIPGPEGVRGRNS-DNTLIKE 368 LTK E IG+D + E+ E++L + H+ G R + D+T ++E Sbjct: 241 LTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAIDSTKLRE 300 Query: 367 KLGWAPTM-RLKDGLRITYFWIKEQLEKEKSEGAXVSA 257 +LGW P ++GL T W E + K+E V A Sbjct: 301 ELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVEA 338
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 35.4 bits (80), Expect = 0.11 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Frame = -1 Query: 541 LTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIP-GPEGVRGRNSDNTLIKEK 365 L S+ PVN+G+ + S+ + A ++ I + + + R D K Sbjct: 313 LMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLL 372 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLEKE 284 LGW P + L++GL T + +++LE + Sbjct: 373 LGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 33.9 bits (76), Expect = 0.31 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%) Frame = -1 Query: 547 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIXHIPGPEGVRGRNSDNTLIKE 368 LR ++ + R + +++V ++ E NK LP IP G+RG + ++ I+E Sbjct: 126 LRKSREEIRAEIQTEKNKVVQEMKIKE------NKPLPPVPIPNLVGIRGGDPEDNDIRE 179 Query: 367 KLGWAPTM--RLKDGLRITYFWIKEQLEKEKSEGAXVSAYGSSKVCTT 230 K M D R TY W +L +G + +GSS++ T Sbjct: 180 KREKIKEMMKHAWDNYR-TYGWGHNELRPIARKGHSPNIFGSSQMGAT 226
>SO1C1_HUMAN (Q9NYB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter polypeptide-related protein Length = 712 Score = 31.2 bits (69), Expect = 2.0 Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 13/119 (10%) Frame = +3 Query: 222 GACVVQTLDDPYADTXAPSDFSFSSCSLIQKYVILSPSFSLMVGAQPSFSLMSV------ 383 G +Q L Y D A D + +Q I+ P F ++G+ + + + Sbjct: 200 GETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLD 259 Query: 384 LSELRPRTPSGPGMWXMGSCLFSKPRTISAISFMLTISSLPMF-------TGSRKSDFV 539 + P+ P G W +G + ++A+ F SLP + S KS F+ Sbjct: 260 HITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSNSSSEKSKFI 318
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -1 Query: 511 NIGSDEMVSMNEMAEIVLGFENKQL-PIXHIPGPEGVRGRNS-DNTLIKEKLGWAPTMRL 338 NIG +S E+ ++L + ++ +G R + D+T I+ +LG+AP + L Sbjct: 240 NIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDL 299 Query: 337 KDGLRITYFW 308 DGL T W Sbjct: 300 ADGLAATVAW 309
>SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Blood-brain barrier-specific anion transporter 1) (BBB-specific anion transporter type 1) Length = 716 Score = 30.4 bits (67), Expect = 3.4 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 13/120 (10%) Frame = +3 Query: 222 GACVVQTLDDPYADTXAPSDFSFSSCSLIQKYVILSPSFSLMVGAQPSFSLMSV------ 383 G +Q L Y D A D + +Q I+ P F ++G+ + + + Sbjct: 203 GETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLD 262 Query: 384 LSELRPRTPSGPGMWXMGSCLFSKPRTISAISFMLTISSLPMF-------TGSRKSDFVS 542 + P+ P G W +G + ++A+ F +LP + S KS F++ Sbjct: 263 HITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLPRSQSREDSGSSSEKSKFIT 322
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 30.4 bits (67), Expect = 3.4 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Frame = -1 Query: 514 VNIGSDEMVSMNEMAEI---VLGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAPTM 344 +N+G+ ++ E+A+ V+G++ + + P+G + D T + + LGW + Sbjct: 243 INVGTGVDCTIRELAQTIAKVVGYKGRV--VFDASKPDGTPRKLLDVTRLHQ-LGWYHEI 299 Query: 343 RLKDGLRITYFWIKEQLEK 287 L+ GL TY W E ++ Sbjct: 300 SLEAGLASTYQWFLENQDR 318
>MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 30.4 bits (67), Expect = 3.4 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Frame = -1 Query: 508 IGSDEMVSMNEMAEIVLGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLK-- 335 I ++ N++A+ + E + LP +P GV G + ++ IK+K M Sbjct: 133 IRAEIQTEKNKVAQAMKTKETRVLPPVPVPQRVGVSGGDPEDMEIKKKRDKIKEMMKHAW 192 Query: 334 DGLRITYFWIKEQLEKEKSEGAXVSAYGSSKVCTT 230 D R TY W +L +G + +GSS++ T Sbjct: 193 DNYR-TYGWGHNELRPIARKGHSTNIFGSSQMGAT 226
>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889| Length = 156 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 10/72 (13%) Frame = -1 Query: 445 KQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 296 K +P+ I P G RG+N+D I +K G A + G RI W + +Q Sbjct: 29 KDMPLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQ 88 Query: 295 LEKEKSEGAXVS 260 L+ K +G VS Sbjct: 89 LDSWKLDGRDVS 100
>Y1298_PHOLL (Q7N760) UPF0247 protein plu1298| Length = 156 Score = 30.0 bits (66), Expect = 4.4 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 10/72 (13%) Frame = -1 Query: 445 KQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 296 K +P I P G RG+N+D I EK G + G RI W + +Q Sbjct: 29 KDMPFDLIEIPAGKRGKNADIKRILEKEGEQMLAAVSKGSRIVTLDIPGSRWETPQLAQQ 88 Query: 295 LEKEKSEGAXVS 260 LE K +G VS Sbjct: 89 LEHWKRDGRDVS 100
>SO1C1_MOUSE (Q9ERB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter 2) (OATP2) Length = 715 Score = 29.6 bits (65), Expect = 5.8 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Frame = +3 Query: 222 GACVVQTLDDPYADTXAPSDFSFSSCSLIQKYVILSPSFSLMVGAQPSFSLMSV------ 383 G +Q L Y D A D + +Q I+ P F ++G+ + + + Sbjct: 203 GETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLD 262 Query: 384 LSELRPRTPSGPGMWXMGSCLFSKPRTISAISFMLTISSLP 506 + P+ P G W +G + ++A+ F +LP Sbjct: 263 HITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLP 303
>YQAK_BACSU (P45908) Hypothetical protein yqaK| Length = 284 Score = 29.3 bits (64), Expect = 7.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 364 LGWAPTMRLKDGLRITYFWIKEQLEKEKSE 275 +G+A L +G R T +W K Q+EK K + Sbjct: 158 IGYAAYFELINGFRKTVYWTKAQVEKHKKK 187
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = -1 Query: 511 NIGSD---EMVSMNEMAEIVLGFENKQLPIXHIPGPEGVRGRNSDNTLIKEKLGWAPTMR 341 NIG+ E++ + E LG E K+ + PG V ++D + E +G+ P Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGD--VLETSADTKALYEVIGFTPETT 316 Query: 340 LKDGLRITYFWIKE 299 +KDG++ W ++ Sbjct: 317 VKDGVKNFVNWYRD 330
>YBJS_ECOLI (P75821) Hypothetical protein ybjS| Length = 337 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Frame = -1 Query: 445 KQLPIXHIPGPEGVRGRNSDNTL----IKEKLGWAPTMRLKDGLRITYFWIKE 299 K+ P+ H GV N D TL +E+LG+ P + L +G+ T W+++ Sbjct: 283 KEPPLTHY----GVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRD 331 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,717,699 Number of Sequences: 219361 Number of extensions: 1564748 Number of successful extensions: 4430 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4428 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
