>emb|AL161636.21| Human DNA sequence from clone RP1-140J1 on chromosome 1 Contains a
             novel gene, two novel small proline rich proteins, a
             ribosomal protein, large, P0 (RPLP0) pseudogene, the  LOR
             gene for loricri and the 3' end of the PGLYRPIalpha gene
             for peptidoglycan recognition protein-I-alpha, complete
             sequence
          Length = 137712

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 109   tgctgttatatgagaaaacaac 130
             ||||||||||||||||||||||
Sbjct: 89960 tgctgttatatgagaaaacaac 89981

>gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, complete sequence
          Length = 175089

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 440   acatggaaattgtcagactca 460
             |||||||||||||||||||||
Sbjct: 55495 acatggaaattgtcagactca 55515

>gb|AC117196.3| Mus musculus BAC clone RP23-108H19 from 8, complete sequence
          Length = 185947

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   tgctgttatatgagaaaacaa 129
             |||||||||||||||||||||
Sbjct: 19237 tgctgttatatgagaaaacaa 19217

>emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in linkage group 16,
            complete sequence
          Length = 173571

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  tagagtaaatagtttgttgca 383
            |||||||||||||||||||||
Sbjct: 5467 tagagtaaatagtttgttgca 5487

>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92909

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 547   gagggacgcatccattttcag 567
             |||||||||||||||||||||
Sbjct: 20012 gagggacgcatccattttcag 20032



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 547   gagggacgcatccattttcag 567
             |||||||||||||||||||||
Sbjct: 19088 gagggacgcatccattttcag 19108

>gb|AC007563.2| Homo sapiens BAC clone RP11-506C8 from 2, complete sequence
          Length = 179859

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 262   agccatgttcattgatttatgccta 286
             ||||||||||||| |||||||||||
Sbjct: 43306 agccatgttcatttatttatgccta 43282

>emb|AJ329977.1|HSA329977 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-UD24C
          Length = 673

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 147 aaagggacaaatctagctttt 167
           |||||||||||||||||||||
Sbjct: 372 aaagggacaaatctagctttt 392

>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete
            sequence
          Length = 230161

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 462  atacttccctcacagcatctt 482
            |||||||||||||||||||||
Sbjct: 4083 atacttccctcacagcatctt 4103

>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b,
             complete sequence
          Length = 92724

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   agggaacaaatccaccctttt 212
             |||||||||||||||||||||
Sbjct: 15792 agggaacaaatccaccctttt 15812

>gb|AC170603.2| Mus musculus BAC clone RP23-140J10 from chromosome 8, complete sequence
          Length = 221596

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 440    acatggaaattgtcagactca 460
              |||||||||||||||||||||
Sbjct: 216896 acatggaaattgtcagactca 216916

>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence
          Length = 185692

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   ggtttgtgcacatggaaatt 450
             ||||||||||||||||||||
Sbjct: 56821 ggtttgtgcacatggaaatt 56840

>gb|AC162898.10| Mus musculus chromosome 5, clone RP23-391P21, complete sequence
          Length = 202279

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 636  tcctcaatgcttgcctccat 655
            ||||||||||||||||||||
Sbjct: 7635 tcctcaatgcttgcctccat 7654

>gb|AC131800.4| Mus musculus BAC clone RP24-535O17 from chromosome 17, complete
             sequence
          Length = 162701

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   cttaatgccaccctccagggcaat 363
             |||||||||||||| |||||||||
Sbjct: 35758 cttaatgccaccctgcagggcaat 35781

>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete
             sequence
          Length = 206180

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaaaaacatgagccatcat 38
             ||||||||||||||||||||
Sbjct: 35067 ttaaaaacatgagccatcat 35048

>gb|AY552098.1| Homo sapiens phospholipase A2, group IVA (cytosolic, calcium-dependent)
              (PLA2G4A) gene, complete cds
          Length = 163504

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    tgttcattgatttatgccta 286
              ||||||||||||||||||||
Sbjct: 162449 tgttcattgatttatgccta 162468

>gb|AC132233.4| Mus musculus BAC clone RP24-490D10 from chromosome 5, complete sequence
          Length = 160438

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 636    tcctcaatgcttgcctccat 655
              ||||||||||||||||||||
Sbjct: 144437 tcctcaatgcttgcctccat 144456

>gb|AC024475.15| Homo sapiens chromosome 11, clone RP11-702F3, complete sequence
          Length = 191960

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 583   atcataagcataaccagcta 602
             ||||||||||||||||||||
Sbjct: 98938 atcataagcataaccagcta 98919

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tccacagtgtcagactgctg 60
              ||||||||||||||||||||
Sbjct: 169871 tccacagtgtcagactgctg 169852

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tccacagtgtcagactgctg 60
              ||||||||||||||||||||
Sbjct: 163825 tccacagtgtcagactgctg 163806

>emb|AL049797.8|HSJ661G12 Human DNA sequence from clone RP4-661G12 on chromosome 1q25.3-31.2
             Contains the 3' end of the PLA2G4A gene for phospholipase
             A2 group IVA (cytosolic, calcium dependent), complete
             sequence
          Length = 143453

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tgttcattgatttatgccta 286
             ||||||||||||||||||||
Sbjct: 60472 tgttcattgatttatgccta 60491

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tccacagtgtcagactgctg 60
              ||||||||||||||||||||
Sbjct: 163825 tccacagtgtcagactgctg 163806

>gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chromosome unknown,
            complete sequence
          Length = 205923

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   aatttaaaaacatgagccat 35
            ||||||||||||||||||||
Sbjct: 6617 aatttaaaaacatgagccat 6636

>gb|AC026773.6| Homo sapiens chromosome 5 clone CTC-230L18, complete sequence
          Length = 130965

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tgtcagactgctgagctggg 67
             ||||||||||||||||||||
Sbjct: 48575 tgtcagactgctgagctggg 48594

>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence
          Length = 163384

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tgtcagactgctgagctggg 67
             ||||||||||||||||||||
Sbjct: 19790 tgtcagactgctgagctggg 19771

>emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in linkage group 5,
             complete sequence
          Length = 179350

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   ccagggcaatagagtaaatagttt 377
             |||||||||||||||||| |||||
Sbjct: 33300 ccagggcaatagagtaaacagttt 33277

>gb|AC175823.2| Pan troglodytes BAC clone CH251-175P6 from chromosome unknown, complete
             sequence
          Length = 176244

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    aatttaaaaacatgagccat 35
             ||||||||||||||||||||
Sbjct: 39280 aatttaaaaacatgagccat 39299

>dbj|AK040173.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430072H19 product:hypothetical protein,
           full insert sequence
          Length = 1750

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 636 tcctcaatgcttgcctccat 655
           ||||||||||||||||||||
Sbjct: 950 tcctcaatgcttgcctccat 969

>gb|AC106893.3| Homo sapiens BAC clone RP11-55P14 from 4, complete sequence
          Length = 48666

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 376 ttgttgcattgttacaaaga 395
           ||||||||||||||||||||
Sbjct: 554 ttgttgcattgttacaaaga 573

>gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete sequence
          Length = 159875

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    ttgttgcattgttacaaaga 395
              ||||||||||||||||||||
Sbjct: 158429 ttgttgcattgttacaaaga 158448

>gb|AF264513.1|AF264513 Oryctolagus cuniculus clone DL5569 IgM heavy chain VDJ region mRNA,
           partial cds
          Length = 415

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 577 gtactcatcataagcataaccagc 600
           ||||||| ||||||||||||||||
Sbjct: 351 gtactcagcataagcataaccagc 328

>gb|AC159033.2| Pan troglodytes BAC clone CH251-339G2 from chromosome unknown, complete
             sequence
          Length = 152653

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    aatttaaaaacatgagccat 35
             ||||||||||||||||||||
Sbjct: 77801 aatttaaaaacatgagccat 77820

>ref|NM_001004179.1| Mus musculus hypothetical gene supported by AK040173 (LOC433873),
           mRNA
          Length = 1750

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 636 tcctcaatgcttgcctccat 655
           ||||||||||||||||||||
Sbjct: 950 tcctcaatgcttgcctccat 969

>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence
          Length = 257730

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   ggtttgtgcacatggaaatt 450
             ||||||||||||||||||||
Sbjct: 10874 ggtttgtgcacatggaaatt 10893

>dbj|AP004311.1| Synechocystis sp. PCC 6803 plasmid pSYSA DNA, complete genome
          Length = 103307

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   ccattgagttcagcacgtagtttt 430
             |||||||||||||||| |||||||
Sbjct: 53779 ccattgagttcagcacttagtttt 53802

>emb|BX293563.9| Mouse DNA sequence from clone RP23-379K6 on chromosome 4, complete
             sequence
          Length = 104349

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   cagcccgagccttttcctcttcat 332
             |||||||||||| |||||||||||
Sbjct: 21511 cagcccgagcctcttcctcttcat 21488

>emb|CT027568.16| Mouse DNA sequence from clone CH29-70E9 on chromosome 17, complete
             sequence
          Length = 90722

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   cttaatgccaccctccagggcaat 363
             |||||||||||||| |||||||||
Sbjct: 46508 cttaatgccaccctgcagggcaat 46531

>emb|AJ344051.1|TBR344051 Trypanosoma brucei brucei GPIdeAc gene for GPI inositol deacylase
          Length = 6108

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 427  ttttggtttgtgcacatgga 446
            ||||||||||||||||||||
Sbjct: 2454 ttttggtttgtgcacatgga 2473

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tccacagtgtcagactgctg 60
              ||||||||||||||||||||
Sbjct: 150044 tccacagtgtcagactgctg 150025


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,791,687
Number of Sequences: 3902068
Number of extensions: 6791687
Number of successful extensions: 134335
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134180
Number of HSP's gapped (non-prelim): 155
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)