ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13c11 |
|---|---|
| Clone Library Name | barley_pub |
>BAT4_MOUSE (Q61858) Protein BAT4 (HLA-B-associated transcript 4) (G5 protein)| Length = 372 Score = 34.7 bits (78), Expect = 0.35 Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -1 Query: 450 SSSGHRQPSNIPAGRPCSGKA----ANGGHIPGQGEGPSGGAPHREECNARPYPTPRGRE 283 S S QPSN+P G P S GG PG G GP G E A P PT R+ Sbjct: 255 SLSRRPQPSNLPLGVPTSSPGFRLLLRGGWEPGMGLGPRG------EGRANPIPTILKRD 308 Query: 282 E 280 + Sbjct: 309 Q 309
>SRF_HUMAN (P11831) Serum response factor (SRF)| Length = 508 Score = 33.5 bits (75), Expect = 0.77 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = -1 Query: 417 PAGRPCSG---KAANGGHIPGQGEGPSGGAPHREECNA---RPYPT 298 P GRP G + ANGG +PG G G G RE A P PT Sbjct: 26 PTGRPGGGGGTRGANGGRVPGNGAGLGPGRLEREAAAAAATTPAPT 71
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 33.1 bits (74), Expect = 1.0 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = -1 Query: 465 RDRRQSSSGH------RQPSNIPAGRPCSGKAANGGHIPGQGEG---PSGGAPHREECNA 313 R R + GH ++PS GRP + A PG G G PSG PH E + Sbjct: 535 RRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSG 594 Query: 312 RPYP-----TPRGREEPR 274 P P R+EPR Sbjct: 595 PADPPAAARLPPERQEPR 612 Score = 33.1 bits (74), Expect = 1.0 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = -1 Query: 465 RDRRQSSSGH------RQPSNIPAGRPCSGKAANGGHIPGQGEG---PSGGAPHREECNA 313 R R + GH ++PS GRP + A PG G G PSG PH E + Sbjct: 410 RRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSG 469 Query: 312 RPYP-----TPRGREEPR 274 P P R+EPR Sbjct: 470 PADPPAAARLPPERQEPR 487 Score = 33.1 bits (74), Expect = 1.0 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = -1 Query: 465 RDRRQSSSGH------RQPSNIPAGRPCSGKAANGGHIPGQGEG---PSGGAPHREECNA 313 R R + GH ++PS GRP + A PG G G PSG PH E + Sbjct: 285 RRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSG 344 Query: 312 RPYP-----TPRGREEPR 274 P P R+EPR Sbjct: 345 PADPPAAARLPPERQEPR 362 Score = 33.1 bits (74), Expect = 1.0 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = -1 Query: 465 RDRRQSSSGH------RQPSNIPAGRPCSGKAANGGHIPGQGEG---PSGGAPHREECNA 313 R R + GH ++PS GRP + A PG G G PSG PH E + Sbjct: 160 RRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVPSGATPHPERGSG 219 Query: 312 RPYP-----TPRGREEPR 274 P P R+EPR Sbjct: 220 PADPPAAARLPPERQEPR 237
>TAT_HV1SC (P05906) TAT protein (Transactivating regulatory protein)| Length = 101 Score = 32.7 bits (73), Expect = 1.3 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 224 QSATTSCWAWPCCTH-QCRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPE 400 ++A TSC+ CC H Q +++ LG+ YGR AP D + + P A Sbjct: 19 KAACTSCYCKKCCFHCQVCFTTKGLGISYGRKKRRQRRRAPQDSQTHQVSL-PKQPASQA 77 Query: 401 HGRPAGMLE 427 G P G E Sbjct: 78 RGDPTGPKE 86
>TAT_HV1S1 (P19553) TAT protein (Transactivating regulatory protein)| Length = 101 Score = 32.3 bits (72), Expect = 1.7 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = +2 Query: 224 QSATTSCWAWPCCTH-QCRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPE 400 ++A T+C+ CC H Q ++ LG+ YGR APPD + P A Sbjct: 19 KTACTNCYCKKCCFHCQVCFITKGLGISYGRKKRRQRRRAPPDSEVHQVSL-PKQPASQP 77 Query: 401 HGRPAGMLE 427 G P G E Sbjct: 78 QGDPTGPKE 86
>BAT4_HUMAN (O95872) Protein BAT4 (HLA-B-associated transcript 4) (G5 protein)| Length = 356 Score = 32.3 bits (72), Expect = 1.7 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Frame = -1 Query: 432 QPSNIPAGRPCSGKA----ANGGHIPGQGEGPSGGAPHREECNARPYPTPRGREE 280 QP N+P G P S GG PG G GP G E A P PT R++ Sbjct: 245 QPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRG------EGRANPIPTVLKRDQ 293
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 32.0 bits (71), Expect = 2.2 Identities = 22/53 (41%), Positives = 23/53 (43%) Frame = -1 Query: 444 SGHRQPSNIPAGRPCSGKAANGGHIPGQGEGPSGGAPHREECNARPYPTPRGR 286 SGHR P P G A GGH P EGP G PH RP+ P R Sbjct: 812 SGHR-----PHEGPGGGMGAGGGHRP--HEGPGHGGPH----GHRPHDVPGHR 853
>PACA_SHEEP (P16613) Pituitary adenylate cyclase-activating polypeptide| precursor (PACAP) [Contains: PACAP-related peptide (PRP-48); Pituitary adenylate cyclase-activating polypeptide 27 (PACAP-27) (PACAP27); Pituitary adenylate cyclase-activating polypep Length = 176 Score = 32.0 bits (71), Expect = 2.2 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +2 Query: 272 CRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPEHGRP 412 C G+ L V YG +HSS+ G+P +PG+ P A+ E G P Sbjct: 4 CSGARLALLV-YGILMHSSVYGSPAASGLRFPGIRPENEAYDEDGNP 49
>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding| protein MBD2) (Demethylase) (DMTase) Length = 411 Score = 32.0 bits (71), Expect = 2.2 Identities = 22/47 (46%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 411 GRPCSGKAANGGHIPGQGEGPS--GGAPHREECNARPYPTPRGREEP 277 GRP SG + GG G G G S GGAP RE P P P G P Sbjct: 95 GRPPSGGSGLGGDGGGCGGGGSGGGGAPRRE-----PVPFPSGSAGP 136
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 31.6 bits (70), Expect = 2.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -1 Query: 426 SNIPAGRPCSGKAANGGHIPGQGEGPSGGAPHREECNARPYPTPRGREEPR 274 S + +G PCS +++ G + G EGP NA P P G E PR Sbjct: 1659 SQVSSG-PCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPR 1708
>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing| factor SRP20) (X16 protein) Length = 164 Score = 31.2 bits (69), Expect = 3.8 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -2 Query: 431 SPPTFQQVDRALERQRTEATSLAREKARQEVLHTERNAMPDHTLHREDVKS 279 SPP ++ R R+ + SL+R++ R+ L ERN P + R +S Sbjct: 108 SPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRS 158
>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing| factor SRP20) Length = 164 Score = 31.2 bits (69), Expect = 3.8 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -2 Query: 431 SPPTFQQVDRALERQRTEATSLAREKARQEVLHTERNAMPDHTLHREDVKS 279 SPP ++ R R+ + SL+R++ R+ L ERN P + R +S Sbjct: 108 SPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRS 158
>OPLA_HUMAN (O14841) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 31.2 bits (69), Expect = 3.8 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 290 PLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPEHG 406 P G GYG P+ P+P PG P AFPEHG Sbjct: 1248 PGGGGYG----------DPEDPAPPPGSPPQALAFPEHG 1276
>CEA19_HUMAN (Q7Z692) Carcinoembryonic antigen-related cell adhesion molecule 19| precursor (Carcinoembryonic antigen-like 1) Length = 300 Score = 31.2 bits (69), Expect = 3.8 Identities = 20/56 (35%), Positives = 22/56 (39%) Frame = +2 Query: 239 SCWAWPCCTHQCRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPEHG 406 SC A+ T RG S L G+ S LC A PS P W PE G Sbjct: 175 SCIAYLLVTRNWRGQSHRLPAPRGQGSLSILCSAVSPVPSVTPSTWMATTEKPELG 230
>FBX41_MOUSE (Q6NS60) F-box only protein 41| Length = 872 Score = 31.2 bits (69), Expect = 3.8 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +2 Query: 254 PCCTHQCRGSSRPLGVGYGR-ALHSSLCGAPPDGPSPWPGMWPPFAAFPEHGRPA 415 P + R PLG + R ++ SS C PP GP P P P +A P PA Sbjct: 138 PAARYALREIEIPLGELFARKSVASSACSTPPPGPGPGPCSGPS-SASPASPSPA 191
>CN152_HUMAN (Q8N9Y4) Protein C14orf152| Length = 354 Score = 31.2 bits (69), Expect = 3.8 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +2 Query: 248 AWPCCTHQCRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFP 397 AW CC Q +G+ ++ GA P P P G+W AFP Sbjct: 272 AWSCCPFQY----------HGQPIYPGPLGALPQSPVPSLGLWRKSPAFP 311
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 31.2 bits (69), Expect = 3.8 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -1 Query: 426 SNIPAGRPCSGKAANGGHIPGQGEGPSGGAPHREECNARPYPTPRGREEPR 274 S + +G PCS +++ G + G EGP NA P P G E PR Sbjct: 1662 SQVSSG-PCSQRSSPDGGLKGAAEGPPKRPGGPSPLNAVPCEGPPGSEPPR 1711
>FOXD2_MOUSE (O35392) Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2)| (MF-2) Length = 492 Score = 30.8 bits (68), Expect = 5.0 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = +2 Query: 296 GVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAF 394 G GYG AL + GAPP GP+P P P AF Sbjct: 269 GYGYGLALPAY--GAPPPGPAPHPHPHPHAFAF 299
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 30.4 bits (67), Expect = 6.5 Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Frame = -1 Query: 429 PSNIP--AGRPCSGKAANGGHI---PG--QGEGPSGGAPHREECNARPY----PTPRG 289 PSN P GRP +G GG PG GP GG P ARP P P G Sbjct: 120 PSNQPPFGGRPSTGPLVGGGSSFPQPGGFPASGPPGGVPSGPPSGARPIGFGSPPPMG 177
>OPLA_RAT (P97608) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 30.4 bits (67), Expect = 6.5 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 290 PLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPEHG 406 P G GYG P+ P+P PG P F AFPE G Sbjct: 1248 PGGGGYG----------DPEDPAPPPGSPPLFPAFPERG 1276
>IF2_RALSO (Q8XZV6) Translation initiation factor IF-2| Length = 964 Score = 30.4 bits (67), Expect = 6.5 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = -2 Query: 455 DSPAPAIVSPPTFQQVDRALERQRTEATSLARE----KARQEVLHTE 327 ++PAP ++V R E QR +A LAR+ KARQE + E Sbjct: 111 EAPAPVTAPVVDVEEVARREEEQRRQAELLARQEAELKARQEAMERE 157
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 30.4 bits (67), Expect = 6.5 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 14/67 (20%) Frame = -1 Query: 444 SGHRQPSNIPAGRPCSGKAANGGHIPGQG--------------EGPSGGAPHREECNARP 307 SGHR P P G A GGH P +G EGP G PH RP Sbjct: 811 SGHR-----PHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPH----GHRP 861 Query: 306 YPTPRGR 286 + P R Sbjct: 862 HDVPGHR 868 Score = 30.0 bits (66), Expect = 8.5 Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -1 Query: 444 SGHRQPSNIPAGRPCSGKAANGGHIP--GQGEGPSGGAPHR 328 SGHR P PAG G GGH P G G G SGG+ HR Sbjct: 779 SGHR-PHEGPAGSMGGG----GGHRPHEGPGGGISGGSGHR 814
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.4 bits (67), Expect = 6.5 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 14/67 (20%) Frame = -1 Query: 444 SGHRQPSNIPAGRPCSGKAANGGHIPGQG--------------EGPSGGAPHREECNARP 307 SGHR P P G A GGH P +G EGP G PH RP Sbjct: 812 SGHR-----PHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPH----GHRP 862 Query: 306 YPTPRGR 286 + P R Sbjct: 863 HDVPGHR 869 Score = 30.0 bits (66), Expect = 8.5 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -1 Query: 444 SGHRQPSNIPAGRPCSGKAANGGHIP--GQGEGPSGGAPHR 328 SGHR P P S GGH P G G G SGG+ HR Sbjct: 780 SGHR-----PHEGPGSSMGGGGGHRPHEGPGGGISGGSGHR 815
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.4 bits (67), Expect = 6.5 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 14/67 (20%) Frame = -1 Query: 444 SGHRQPSNIPAGRPCSGKAANGGHIPGQG--------------EGPSGGAPHREECNARP 307 SGHR P P G A GGH P +G EGP G PH RP Sbjct: 811 SGHR-----PHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPH----GHRP 861 Query: 306 YPTPRGR 286 + P R Sbjct: 862 HDVPGHR 868
>OGFR_HUMAN (Q9NZT2) Opioid growth factor receptor (OGFr) (Zeta-type opioid| receptor) (7-60 protein) Length = 677 Score = 30.4 bits (67), Expect = 6.5 Identities = 16/48 (33%), Positives = 18/48 (37%) Frame = -1 Query: 429 PSNIPAGRPCSGKAANGGHIPGQGEGPSGGAPHREECNARPYPTPRGR 286 PS P RP P + GPS P R+E P TP R Sbjct: 558 PSETPGPRPAGPAGDEPAETPSETPGPSPAGPTRDEPAESPSETPGPR 605
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 30.4 bits (67), Expect = 6.5 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -1 Query: 456 RQSSSGHRQPSNIPAGRP-CSGKAANGGHIPGQGEGPSGGAPHREECNARPYPTPRGREE 280 ++S S R + RP GK GG G G GP GG + R +P+P+ R Sbjct: 1383 KRSFSSQRPGMDRQNRRPGAGGKTGGGGSSGGGGAGP-GGRTGPGRGDKRSWPSPKNRSR 1441 Query: 279 P 277 P Sbjct: 1442 P 1442
>TAT_HV1MN (P05905) TAT protein (Transactivating regulatory protein)| Length = 101 Score = 30.0 bits (66), Expect = 8.5 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +2 Query: 224 QSATTSCWAWPCCTH-QCRGSSRPLGVGYGRALHSSLCGAPPD 349 ++A T+C+ CC H Q + + LG+ YGR AP D Sbjct: 19 KTACTTCYCKKCCFHCQVCFTKKALGISYGRKKRRQRRRAPED 61
>TAT_HV1JR (P20879) TAT protein (Transactivating regulatory protein)| Length = 101 Score = 30.0 bits (66), Expect = 8.5 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 224 QSATTSCWAWPCCTH-QCRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPE 400 ++A T+C+ CC H Q +++ LG+ YGR P D + + P + + Sbjct: 19 KTACTNCYCKKCCLHCQVCFTTKGLGISYGRKKRRQRRRPPQDSQTHQVSL-PKQPSSQQ 77 Query: 401 HGRPAGMLE 427 G P G E Sbjct: 78 RGDPTGPKE 86
>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)| (Forkhead-related transcription factor 9) (FREAC-9) Length = 497 Score = 30.0 bits (66), Expect = 8.5 Identities = 17/33 (51%), Positives = 19/33 (57%) Frame = +2 Query: 296 GVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAF 394 G GYG AL + GAPP GP+P P P AF Sbjct: 267 GYGYGLALPAY--GAPPPGPAPHPHPHPHPHAF 297
>GCC1_HUMAN (Q96CN9) GRIP and coiled-coil domain-containing protein 1 (Golgi| coiled coil protein 1) Length = 775 Score = 30.0 bits (66), Expect = 8.5 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = -2 Query: 440 AIVSPPTFQQVDRALERQRTEATSLAREKARQEVLHTERNAMPDHTL-----HREDVKSL 276 A + PTF L R+ E TSL ++K R EV E + + D L HRE+V +L Sbjct: 646 AAANEPTFFLYAEQLARKEVEITSLRKQKHRLEV---EVHQLQDRLLEEGERHREEVAAL 702
>ERF_MOUSE (P70459) ETS domain-containing transcription factor ERF| Length = 551 Score = 30.0 bits (66), Expect = 8.5 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = -1 Query: 432 QPSNIPAGRPCSGKAANGGHIPGQGEGPSGGAPHREECNARPYPTPRGREEPRH**VQHG 253 QP + + +G+ A GG G SGG A P P P+ + EP + G Sbjct: 380 QPPPLGRRQRAAGEKAPGGTDKSSGGSGSGGLAEGAGAVAPPPPPPQIKVEP----ISEG 435 Query: 252 QAQQLVVAD 226 +++++ V D Sbjct: 436 ESEEVEVTD 444
>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6| Length = 545 Score = 30.0 bits (66), Expect = 8.5 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 290 PLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPEHGRPA 415 PLG G A + G PP GP P P + P F P + P+ Sbjct: 326 PLGPPLGLAPPPHMQGPPPGGPPPAPHVNPAFFPPPGNNMPS 367
>PACA_HUMAN (P18509) Pituitary adenylate cyclase-activating polypeptide| precursor (PACAP) [Contains: PACAP-related peptide (PRP-48); Pituitary adenylate cyclase-activating polypeptide 27 (PACAP-27) (PACAP27); Pituitary adenylate cyclase-activating polypep Length = 176 Score = 30.0 bits (66), Expect = 8.5 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +2 Query: 272 CRGSSRPLGVGYGRALHSSLCGAPPDGPSPWPGMWPPFAAFPEHGRPAGMLEG 430 C G+ L V YG +HSS+ +P +PG+ P A+ E G P +G Sbjct: 4 CSGARLALLV-YGIIMHSSVYSSPAAAGLRFPGIRPEEEAYGEDGNPLPDFDG 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,586,858 Number of Sequences: 219361 Number of extensions: 1765877 Number of successful extensions: 7085 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7019 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 8410191164 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
