ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12n10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
2ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothet... 339 7e-90
3gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence 157 5e-35
4gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 157 5e-35
5gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
8gb|BC099942.1| Mus musculus solute carrier family 9 (sodium/hydr... 48 0.035
9dbj|AK156494.1| Mus musculus activated spleen cDNA, RIKEN full-l... 48 0.035
10gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome... 48 0.035
11ref|NM_177909.3| Mus musculus solute carrier family 9 (sodium/hy... 48 0.035
12ref|NM_001036784.1| Arabidopsis thaliana unknown protein AT5G096... 44 0.55
13dbj|AK175645.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 44 0.55
14dbj|AK175110.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 44 0.55
15dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.55
16emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, B... 44 0.55
17gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 42 2.2
18gb|AC132416.2| Mus musculus BAC clone RP23-251A5 from chromosome... 42 2.2
19gb|AC161059.4| Mus musculus BAC clone RP23-82L9 from chromosome ... 42 2.2
20gb|AC115849.13| Mus musculus chromosome 6, clone RP24-249N21, co... 42 2.2
21gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 42 2.2
22ref|NM_116602.2| Arabidopsis thaliana unknown protein AT4G03640 ... 40 8.6
23gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV... 40 8.6
24gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, c... 40 8.6
25ref|XM_451081.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01848g ... 40 8.6
26gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome... 40 8.6
27emb|AL591435.10| Human DNA sequence from clone RP11-712I22 on ch... 40 8.6
28emb|AL590290.5| Human DNA sequence from clone RP11-228O6 on chro... 40 8.6
29ref|XM_965976.1| PREDICTED: Tribolium castaneum similar to CG548... 40 8.6
30emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.6
31emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 40 8.6
32gb|AF022971.1| Caenorhabditis elegans cosmid C31B8, complete seq... 40 8.6
33emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, c... 40 8.6
34gb|AC165950.1| Mus musculus BAC clone RP24-235L20 from chromosom... 40 8.6
35gb|AF203584.1|AF203584 Zornia sp. Lavin 5039 maturase (matK) gen... 40 8.6
36gb|AC010418.6|AC010418 Homo sapiens chromosome 5 clone CTD-2177G... 40 8.6
37gb|AC159476.5| Mus musculus 10 BAC RP23-53O16 (Roswell Park Canc... 40 8.6
38emb|BX005028.16| Zebrafish DNA sequence from clone CH211-177D23,... 40 8.6
39gb|AY954234.1| Ranunculus lapponicus voucher J.T. Johansson s.n.... 40 8.6
40gb|AC157506.3| Medicago truncatula chromosome 7 BAC clone mth2-5... 40 8.6
41gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complet... 40 8.6
42gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, c... 40 8.6
43gb|AC018765.4|AC018765 Homo sapiens chromosome 5 clone CTD-2351A... 40 8.6
44emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in... 40 8.6
45dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16,... 40 8.6
46gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome 40 8.6
47gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, co... 40 8.6
48dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.6
49gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, co... 40 8.6
50gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, c... 40 8.6
51gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, co... 40 8.6
52gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, compl... 40 8.6
53gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, compl... 40 8.6
54gb|U97553.1|U97553 Murine herpesvirus 68 strain WUMS, complete g... 40 8.6
55dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.6
56dbj|AP000152.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 8.6
57dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 8.6
58dbj|AP001412.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB... 40 8.6 
>dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114M12, full
            insert sequence
          Length = 1599

 Score =  357 bits (180), Expect = 3e-95
 Identities = 382/448 (85%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                        
Query: 184  gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 243
            ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 1080 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 1021

                                                                        
Query: 244  tgatgtagcttcggctaccaatttcaccgccgttgaaagagcatgcccttttgccatcaa 303
            ||||||||||||    |||| |||||| |||| ||| |||| ||| || |  | ||||||
Sbjct: 1020 tgatgtagcttcactcaccattttcactgccgctgacagaggatgtccctgcgtcatcaa 961

                                                                        
Query: 304  ttctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaattgagtt 363
            ||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||| | ||
Sbjct: 960  ttctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaattaactt 901

                                                                        
Query: 364  cccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttcatttgc 423
             || |||||||| |  || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 900  tccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttcattcgc 841

                                                                        
Query: 424  ttctcctagagttcctcgccaaaactcttcatgcaatttggttatctcccttgcaataac 483
            ||| || | |||||| |||||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 840  ttcaccaatagttccccgccaaaactcttcgtgtaatttcgttatctcccttgcaataac 781

                                                                        
Query: 484  acatgaccttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatg 543
            ||||||||| ||||||||||| || ||||||||||||  |||||| || |||||||||||
Sbjct: 780  acatgacctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatg 721

                                                                        
Query: 544  aggaggaacatagaatattttgtgtcacagcctcacgagcagatacctcaagcctagctt 603
             |||||||||||||| | |||||||  |||| | ||  |||||||  ||||||||  |||
Sbjct: 720  gggaggaacatagaa-aatttgtgtggcagcttgacaggcagatatttcaagcctttctt 662

                                        
Query: 604  ttcttgatcgaccatgctttggtaaaaa 631
            ||||||||||| ||||||||||||||||
Sbjct: 661  ttcttgatcgagcatgctttggtaaaaa 634
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>ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0045B21.18), mRNA
          Length = 1113

 Score =  339 bits (171), Expect = 7e-90
 Identities = 352/411 (85%), Gaps = 1/411 (0%)
 Strand = Plus / Minus

                                                                       
Query: 221 gcataaacatctttcttctttgctgatgtagcttcggctaccaatttcaccgccgttgaa 280
           ||||||||||| |||||||||||||||||||||||    |||| |||||| |||| ||| 
Sbjct: 980 gcataaacatccttcttctttgctgatgtagcttcactcaccattttcactgccgctgac 921

                                                                       
Query: 281 agagcatgcccttttgccatcaattctctgagttcatgctcaagaaaatcatcagatggt 340
           |||| ||| || |  | ||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 920 agaggatgtccctgcgtcatcaattctctgagttcatgctcaaggaaatcctcagatgga 861

                                                                       
Query: 341 ttttcaacaattgaaattgagttcccatctatgaggatggtgatttctccctttggctgt 400
            ||||| ||  ||||||| | || || |||||||| |  || ||||||||||||||||| 
Sbjct: 860 gtttcatcagctgaaattaactttccctctatgagcactgtaatttctccctttggctgc 801

                                                                       
Query: 401 cgagttgcaaaggcttcatttgcttctcctagagttcctcgccaaaactcttcatgcaat 460
           |||||||||||||||||||||||||| || | |||||| |||||||||||||| || |||
Sbjct: 800 cgagttgcaaaggcttcatttgcttcaccaatagttccccgccaaaactcttcgtgtaat 741

                                                                       
Query: 461 ttggttatctcccttgcaataacacatgaccttgaatcaccaaaagacgaagcagcatca 520
           || ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 740 ttcgttatctcccttgcaataacacatgacctagaatcaccaaatgatgaagcagcatca 681

                                                                       
Query: 521 acaagaaactgttgaattccatgaggaggaacatagaatattttgtgtcacagcctcacg 580
             |||||| || ||||||||||| |||||||||||||| | |||||||  |||| | || 
Sbjct: 680 gaaagaaattggtgaattccatggggaggaacatagaa-aatttgtgtggcagcttgaca 622

                                                              
Query: 581 agcagatacctcaagcctagcttttcttgatcgaccatgctttggtaaaaa 631
            |||||||  ||||||||  |||||||||||||| ||||||||||||||||
Sbjct: 621 ggcagatatttcaagcctttcttttcttgatcgagcatgctttggtaaaaa 571
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>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score =  157 bits (79), Expect = 5e-35
 Identities = 128/143 (89%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                          
Query: 489    accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 548
              |||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 224745 acctggaatcgccaaaagatgaagcagcatcaacaagaaactgctgaatgccatggggag 224804

                                                                          
Query: 549    gaacatagaatattttgtgtcacagcctcacgagcagatacctcaagcctagcttttctt 608
              |||||||||||| |||||||  |||| ||||||||||||| |||||||||| || |||||
Sbjct: 224805 gaacatagaata-tttgtgtagcagcttcacgagcagatatctcaagcctatctcttctt 224863

                                     
Query: 609    gatcgaccatgctttggtaaaaa 631
              || ||| ||||||||||||||||
Sbjct: 224864 gaccgagcatgctttggtaaaaa 224886



 Score =  123 bits (62), Expect = 7e-25
 Identities = 128/150 (85%)
 Strand = Plus / Plus

                                                                          
Query: 300    tcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaattg 359
              |||||||||| |||||||||||||| ||||| || |||||  ||||  ||  ||||||| 
Sbjct: 223874 tcaattctcttagttcatgctcaaggaaatcctctgatggaatttcgtcatctgaaatta 223933

                                                                          
Query: 360    agttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttcat 419
              | ||||| |||||||| |  || |||||||||||||| |||||||||||||| |||||||
Sbjct: 223934 acttcccctctatgagcactgttatttctccctttggttgtcgagttgcaaaagcttcat 223993

                                            
Query: 420    ttgcttctcctagagttcctcgccaaaact 449
              ||||||| |||| |||||| ||||||||||
Sbjct: 223994 ttgcttcacctaaagttccacgccaaaact 224023



 Score =  115 bits (58), Expect = 2e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 185    cattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgct 244
              ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 223673 cattttacttattttccaaacaacctcaatgcgagtgcataaacatctttcttctttgct 223732

                                            
Query: 245    gatgtagcttcggctaccaatttcaccgcc 274
              ||||| ||||| |  |||||||||||||||
Sbjct: 223733 gatgtggcttcagtgaccaatttcaccgcc 223762
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score =  157 bits (79), Expect = 5e-35
 Identities = 128/143 (89%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                          
Query: 489    accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 548
              |||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 176957 acctggaatcgccaaaagatgaagcagcatcaacaagaaactgctgaatgccatggggag 177016

                                                                          
Query: 549    gaacatagaatattttgtgtcacagcctcacgagcagatacctcaagcctagcttttctt 608
              |||||||||||| |||||||  |||| ||||||||||||| |||||||||| || |||||
Sbjct: 177017 gaacatagaata-tttgtgtagcagcttcacgagcagatatctcaagcctatctcttctt 177075

                                     
Query: 609    gatcgaccatgctttggtaaaaa 631
              || ||| ||||||||||||||||
Sbjct: 177076 gaccgagcatgctttggtaaaaa 177098



 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Plus

                                                                          
Query: 293    tttgccatcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaatt 352
              |||||| |||||||||| |||||||||||||| ||||| || |||||  ||||  ||  |
Sbjct: 176080 tttgccgtcaattctcttagttcatgctcaaggaaatcctctgatggaatttcgtcatct 176139

                                                                          
Query: 353    gaaattgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaag 412
              |||||| | ||||| |||||||| |  || |||||||||||||| |||||||||||||| 
Sbjct: 176140 gaaattaacttcccctctatgagcactgttatttctccctttggttgtcgagttgcaaaa 176199

                                                   
Query: 413    gcttcatttgcttctcctagagttcctcgccaaaact 449
              |||||||||||||| |||| |||||| ||||||||||
Sbjct: 176200 gcttcatttgcttcacctaaagttccacgccaaaact 176236



 Score =  115 bits (58), Expect = 2e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 185    cattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgct 244
              ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 175886 cattttacttattttccaaacaacctcaatgcgagtgcataaacatctttcttctttgct 175945

                                            
Query: 245    gatgtagcttcggctaccaatttcaccgcc 274
              ||||| ||||| |  |||||||||||||||
Sbjct: 175946 gatgtggcttcagtgaccaatttcaccgcc 175975
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score =  143 bits (72), Expect = 8e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                          
Query: 298    catcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaat 357
              ||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||
Sbjct: 128931 catcaattctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaat 128990

                                                                          
Query: 358    tgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttc 417
              | | || || |||||||| |  || ||||||||||||||||| |||||||||||||||||
Sbjct: 128991 taactttccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttc 129050

                                              
Query: 418    atttgcttctcctagagttcctcgccaaaact 449
              ||||||||| || | |||||| ||||||||||
Sbjct: 129051 atttgcttcaccaatagttccccgccaaaact 129082



 Score =  109 bits (55), Expect = 1e-20
 Identities = 122/143 (85%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                          
Query: 489    accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 548
              |||| ||||||||||| || ||||||||||||  |||||| || ||||||||||| ||||
Sbjct: 129705 acctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatggggag 129764

                                                                          
Query: 549    gaacatagaatattttgtgtcacagcctcacgagcagatacctcaagcctagcttttctt 608
              |||||||||| | |||||||  |||| | ||  |||||||  ||||||||  ||||||||
Sbjct: 129765 gaacatagaa-aatttgtgtggcagcttgacaggcagatatttcaagcctttcttttctt 129823

                                     
Query: 609    gatcgaccatgctttggtaaaaa 631
              |||||| ||||||||||||||||
Sbjct: 129824 gatcgagcatgctttggtaaaaa 129846



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 184    gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 243
              ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 128666 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 128725

                          
Query: 244    tgatgtagcttc 255
              ||||||||||||
Sbjct: 128726 tgatgtagcttc 128737



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                           
Query: 448    ctcttcatgcaatttggttatctcccttgcaataacacatgacct 492
              |||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 129473 ctcttcgtgtaatttcgttatctcccttgcaataacacatgacct 129517
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  143 bits (72), Expect = 8e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                            
Query: 298      catcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaat 357
                ||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||
Sbjct: 13960305 catcaattctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaat 13960364

                                                                            
Query: 358      tgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttc 417
                | | || || |||||||| |  || ||||||||||||||||| |||||||||||||||||
Sbjct: 13960365 taactttccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttc 13960424

                                                
Query: 418      atttgcttctcctagagttcctcgccaaaact 449
                ||||||||| || | |||||| ||||||||||
Sbjct: 13960425 atttgcttcaccaatagttccccgccaaaact 13960456



 Score =  109 bits (55), Expect = 1e-20
 Identities = 122/143 (85%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                            
Query: 489      accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 548
                |||| ||||||||||| || ||||||||||||  |||||| || ||||||||||| ||||
Sbjct: 13961079 acctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatggggag 13961138

                                                                            
Query: 549      gaacatagaatattttgtgtcacagcctcacgagcagatacctcaagcctagcttttctt 608
                |||||||||| | |||||||  |||| | ||  |||||||  ||||||||  ||||||||
Sbjct: 13961139 gaacatagaa-aatttgtgtggcagcttgacaggcagatatttcaagcctttcttttctt 13961197

                                       
Query: 609      gatcgaccatgctttggtaaaaa 631
                |||||| ||||||||||||||||
Sbjct: 13961198 gatcgagcatgctttggtaaaaa 13961220



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 184      gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 243
                ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 13960040 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 13960099

                            
Query: 244      tgatgtagcttc 255
                ||||||||||||
Sbjct: 13960100 tgatgtagcttc 13960111



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 448      ctcttcatgcaatttggttatctcccttgcaataacacatgacct 492
                |||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 13960847 ctcttcgtgtaatttcgttatctcccttgcaataacacatgacct 13960891
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  143 bits (72), Expect = 8e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                            
Query: 298      catcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaat 357
                ||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||
Sbjct: 13967647 catcaattctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaat 13967706

                                                                            
Query: 358      tgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttc 417
                | | || || |||||||| |  || ||||||||||||||||| |||||||||||||||||
Sbjct: 13967707 taactttccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttc 13967766

                                                
Query: 418      atttgcttctcctagagttcctcgccaaaact 449
                ||||||||| || | |||||| ||||||||||
Sbjct: 13967767 atttgcttcaccaatagttccccgccaaaact 13967798



 Score =  109 bits (55), Expect = 1e-20
 Identities = 122/143 (85%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                            
Query: 489      accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 548
                |||| ||||||||||| || ||||||||||||  |||||| || ||||||||||| ||||
Sbjct: 13968421 acctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatggggag 13968480

                                                                            
Query: 549      gaacatagaatattttgtgtcacagcctcacgagcagatacctcaagcctagcttttctt 608
                |||||||||| | |||||||  |||| | ||  |||||||  ||||||||  ||||||||
Sbjct: 13968481 gaacatagaa-aatttgtgtggcagcttgacaggcagatatttcaagcctttcttttctt 13968539

                                       
Query: 609      gatcgaccatgctttggtaaaaa 631
                |||||| ||||||||||||||||
Sbjct: 13968540 gatcgagcatgctttggtaaaaa 13968562



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 184      gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 243
                ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 13967382 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 13967441

                            
Query: 244      tgatgtagcttc 255
                ||||||||||||
Sbjct: 13967442 tgatgtagcttc 13967453



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 448      ctcttcatgcaatttggttatctcccttgcaataacacatgacct 492
                |||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 13968189 ctcttcgtgtaatttcgttatctcccttgcaataacacatgacct 13968233
to top
>gb|BC099942.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            isoform 9, mRNA (cDNA clone MGC:107413 IMAGE:30103308),
            complete cds
          Length = 3539

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 584  agatacctcaagcctagcttttcttgat 611
            |||||||||||||||||||| |||||||
Sbjct: 3105 agatacctcaagcctagcttctcttgat 3132
to top
>dbj|AK156494.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830027D23 product:solute carrier family 9
            (sodium/hydrogen exchanger), isoform 9, full insert
            sequence
          Length = 3447

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 584  agatacctcaagcctagcttttcttgat 611
            |||||||||||||||||||| |||||||
Sbjct: 3095 agatacctcaagcctagcttctcttgat 3122
to top
>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete sequence
          Length = 189253

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 584   agatacctcaagcctagcttttcttgat 611
             |||||||||||||||||||| |||||||
Sbjct: 59306 agatacctcaagcctagcttctcttgat 59279
to top
>ref|NM_177909.3| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger),
            isoform 9 (Slc9a9), mRNA
          Length = 3539

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 584  agatacctcaagcctagcttttcttgat 611
            |||||||||||||||||||| |||||||
Sbjct: 3105 agatacctcaagcctagcttctcttgat 3132
to top
>ref|NM_001036784.1| Arabidopsis thaliana unknown protein AT5G09680 transcript variant
            AT5G09680.2 mRNA, complete cds
          Length = 1194

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 73   aaaattataaatttctaataca 94
            ||||||||||||||||||||||
Sbjct: 1187 aaaattataaatttctaataca 1166
to top
>dbj|AK175645.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-13-G23
          Length = 932

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 73  aaaattataaatttctaataca 94
           ||||||||||||||||||||||
Sbjct: 897 aaaattataaatttctaataca 876
to top
>dbj|AK175110.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-51-D14
          Length = 1204

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 73   aaaattataaatttctaataca 94
            ||||||||||||||||||||||
Sbjct: 1187 aaaattataaatttctaataca 1166
to top
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16
          Length = 68098

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 73    aaaattataaatttctaataca 94
             ||||||||||||||||||||||
Sbjct: 20090 aaaattataaatttctaataca 20111
to top
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project)
          Length = 92491

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 73    aaaattataaatttctaataca 94
             ||||||||||||||||||||||
Sbjct: 49494 aaaattataaatttctaataca 49473
to top
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    gcaaaggcttcatttgcttct 427
              |||||||||||||||||||||
Sbjct: 898037 gcaaaggcttcatttgcttct 898057
to top
>gb|AC132416.2| Mus musculus BAC clone RP23-251A5 from chromosome 6, complete sequence
          Length = 157472

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 558    atattttgtgtcacagcctca 578
              |||||||||||||||||||||
Sbjct: 107723 atattttgtgtcacagcctca 107703
to top
>gb|AC161059.4| Mus musculus BAC clone RP23-82L9 from chromosome 6, complete sequence
          Length = 294389

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   atattttgtgtcacagcctca 578
             |||||||||||||||||||||
Sbjct: 46483 atattttgtgtcacagcctca 46503
to top
>gb|AC115849.13| Mus musculus chromosome 6, clone RP24-249N21, complete sequence
          Length = 130241

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 558   atattttgtgtcacagcctca 578
             |||||||||||||||||||||
Sbjct: 81358 atattttgtgtcacagcctca 81378
to top
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    gcaaaggcttcatttgcttct 427
              |||||||||||||||||||||
Sbjct: 833710 gcaaaggcttcatttgcttct 833730
to top
>ref|NM_116602.2| Arabidopsis thaliana unknown protein AT4G03640 mRNA, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 attttccaaacaccctcagt 214
           ||||||||||||||||||||
Sbjct: 305 attttccaaacaccctcagt 286
to top
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
             sequence
          Length = 116448

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   attttccaaacaccctcagt 214
             ||||||||||||||||||||
Sbjct: 55770 attttccaaacaccctcagt 55751
to top
>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   tctttcttctttgctgatgt 249
             ||||||||||||||||||||
Sbjct: 18908 tctttcttctttgctgatgt 18927
to top
>ref|XM_451081.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01848g predicted mRNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  ttcatgctcaagaaaatcat 332
            ||||||||||||||||||||
Sbjct: 1003 ttcatgctcaagaaaatcat 1022
to top
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence
          Length = 231668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    attttactcattttccaaacaccc 209
              ||||||||||||||||||| ||||
Sbjct: 135352 attttactcattttccaaataccc 135375
to top
>emb|AL591435.10| Human DNA sequence from clone RP11-712I22 on chromosome X, complete
             sequence
          Length = 138038

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 602   ttttcttgatcgaccatgct 621
             ||||||||||||||||||||
Sbjct: 60673 ttttcttgatcgaccatgct 60654
to top
>emb|AL590290.5| Human DNA sequence from clone RP11-228O6 on chromosome 6, complete
             sequence
          Length = 114653

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ggattgaatggattgcattt 189
             ||||||||||||||||||||
Sbjct: 25112 ggattgaatggattgcattt 25093
to top
>ref|XM_965976.1| PREDICTED: Tribolium castaneum similar to CG5485-PA (LOC659697), mRNA
          Length = 2109

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  cattttactcattttccaaa 204
            ||||||||||||||||||||
Sbjct: 1392 cattttactcattttccaaa 1373
to top
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    ttcatgctcaagaaaatcat 332
              ||||||||||||||||||||
Sbjct: 168821 ttcatgctcaagaaaatcat 168802
to top
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 543    gaggaggaacatagaatatt 562
              ||||||||||||||||||||
Sbjct: 441522 gaggaggaacatagaatatt 441503
to top
>gb|AF022971.1| Caenorhabditis elegans cosmid C31B8, complete sequence
          Length = 44307

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  cttttgccatcaattctctg 310
            ||||||||||||||||||||
Sbjct: 3060 cttttgccatcaattctctg 3041
to top
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
          Length = 159629

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   attttccaaacaccctcagt 214
             ||||||||||||||||||||
Sbjct: 77048 attttccaaacaccctcagt 77029
to top
>gb|AC165950.1| Mus musculus BAC clone RP24-235L20 from chromosome 13, complete sequence
          Length = 178927

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    agctatttcttttgagggga 119
              ||||||||||||||||||||
Sbjct: 153243 agctatttcttttgagggga 153224
to top
>gb|AF203584.1|AF203584 Zornia sp. Lavin 5039 maturase (matK) gene, complete cds; chloroplast
            gene for chloroplast product
          Length = 2636

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  caacaattgaaattgagttc 364
            ||||||||||||||||||||
Sbjct: 1091 caacaattgaaattgagttc 1110
to top
>gb|AC010418.6|AC010418 Homo sapiens chromosome 5 clone CTD-2177G22, complete sequence
          Length = 88018

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  ttttcaacaattgaaattga 360
            ||||||||||||||||||||
Sbjct: 7422 ttttcaacaattgaaattga 7441
to top
>gb|AC159476.5| Mus musculus 10 BAC RP23-53O16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 212483

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aaaattataaatttctaata 92
             ||||||||||||||||||||
Sbjct: 83569 aaaattataaatttctaata 83550
to top
>emb|BX005028.16| Zebrafish DNA sequence from clone CH211-177D23, complete sequence
          Length = 149509

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   gaatattttgtgtcacagcc 575
             ||||||||||||||||||||
Sbjct: 51061 gaatattttgtgtcacagcc 51042
to top
>gb|AY954234.1| Ranunculus lapponicus voucher J.T. Johansson s.n. trnK gene,
           intron; and maturase K (matK) gene, complete cds;
           chloroplast
          Length = 1817

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 598 tagcttttcttgatcgacca 617
           ||||||||||||||||||||
Sbjct: 750 tagcttttcttgatcgacca 769
to top
>gb|AC157506.3| Medicago truncatula chromosome 7 BAC clone mth2-50e7, complete sequence
          Length = 127666

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   ttcaacaattgaaattgagt 362
             ||||||||||||||||||||
Sbjct: 54163 ttcaacaattgaaattgagt 54144
to top
>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence
          Length = 172515

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aaaattataaatttctaata 92
              ||||||||||||||||||||
Sbjct: 124925 aaaattataaatttctaata 124906
to top
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence
          Length = 213223

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 299    atcaattctctgagttcatgctca 322
              ||||||||||| ||||||||||||
Sbjct: 139101 atcaattctctcagttcatgctca 139124
to top
>gb|AC018765.4|AC018765 Homo sapiens chromosome 5 clone CTD-2351A16, complete sequence
          Length = 132916

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    ttttcaacaattgaaattga 360
              ||||||||||||||||||||
Sbjct: 110852 ttttcaacaattgaaattga 110833
to top
>emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in linkage group 1,
              complete sequence
          Length = 167871

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 15     aaccatacagttgacaccaaactg 38
              |||||||||||||| |||||||||
Sbjct: 146482 aaccatacagttgaaaccaaactg 146505
to top
>dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16, map 22, complete
             sequences
          Length = 147114

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tcccatctatgaggatggtg 382
             ||||||||||||||||||||
Sbjct: 37373 tcccatctatgaggatggtg 37354
to top
>gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome
          Length = 119550

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   agcatcaacaagaaactgtt 533
             ||||||||||||||||||||
Sbjct: 54589 agcatcaacaagaaactgtt 54608
to top
>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence
          Length = 211915

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    ttttccaaacaccctcagtg 215
              ||||||||||||||||||||
Sbjct: 151426 ttttccaaacaccctcagtg 151445
to top
>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    tcccatctatgaggatggtg 382
              ||||||||||||||||||||
Sbjct: 152149 tcccatctatgaggatggtg 152130
to top
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence
          Length = 215708

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    atcaattctctgagttcatgctca 322
              ||||||||||| ||||||||||||
Sbjct: 152908 atcaattctctcagttcatgctca 152885
to top
>gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, complete sequence
          Length = 152500

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   tctttcttctttgctgatgt 249
             ||||||||||||||||||||
Sbjct: 26474 tctttcttctttgctgatgt 26493
to top
>gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, complete sequence
          Length = 154308

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    aaattataaatttctaatacatct 97
             ||||||||||||||||| ||||||
Sbjct: 25412 aaattataaatttctaacacatct 25389
to top
>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence
          Length = 209934

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   agctatttcttttgagggga 119
             ||||||||||||||||||||
Sbjct: 19502 agctatttcttttgagggga 19483
to top
>gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, complete sequence
          Length = 210193

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    aaattataaatttctaatacatct 97
             ||||||||||||||||| ||||||
Sbjct: 41934 aaattataaatttctaacacatct 41957
to top
>gb|U97553.1|U97553 Murine herpesvirus 68 strain WUMS, complete genome
          Length = 119450

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   agcatcaacaagaaactgtt 533
             ||||||||||||||||||||
Sbjct: 54588 agcatcaacaagaaactgtt 54607
to top
>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b,
             complete sequence
          Length = 93261

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aaaattataaatttctaata 92
             ||||||||||||||||||||
Sbjct: 78466 aaaattataaatttctaata 78447
to top
>dbj|AP000152.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 4/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tcccatctatgaggatggtg 382
             ||||||||||||||||||||
Sbjct: 21566 tcccatctatgaggatggtg 21547
to top
>dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 3/13
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tcccatctatgaggatggtg 382
             ||||||||||||||||||||
Sbjct: 69221 tcccatctatgaggatggtg 69202
to top
>dbj|AP001412.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region,
             clone:D10
          Length = 67050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tcccatctatgaggatggtg 382
             ||||||||||||||||||||
Sbjct: 17520 tcccatctatgaggatggtg 17501


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,856,598
Number of Sequences: 3902068
Number of extensions: 6856598
Number of successful extensions: 139900
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139582
Number of HSP's gapped (non-prelim): 307
length of query: 631
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 608
effective length of database: 17,143,297,704
effective search space: 10423125004032
effective search space used: 10423125004032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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