ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13c04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507556.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.18 mRNA Length = 1185 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Minus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 707 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 648 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 647 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 588 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 587 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 528 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 527 ggcatgataagcaacggttactgggtggctt 497 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 345 taacactttgagcacatgttttctgtcatccggctgcca 307
>ref|XM_469955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1178 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Minus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 700 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 641 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 640 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 581 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 580 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 521 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 520 ggcatgataagcaacggttactgggtggctt 490 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 338 taacactttgagcacatgttttctgtcatccggctgcca 300
>ref|XM_507075.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060J21.18 mRNA Length = 1204 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Minus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 726 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 667 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 666 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 607 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 606 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 547 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 546 ggcatgataagcaacggttactgggtggctt 516 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 364 taacactttgagcacatgttttctgtcatccggctgcca 326
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Minus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 73073 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 73014 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 73013 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 72954 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 72953 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 72894 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 72893 ggcatgataagcaacggttactgggtggctt 72863 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 72711 taacactttgagcacatgttttctgtcatccggctgcca 72673 Score = 61.9 bits (31), Expect = 3e-06 Identities = 117/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 |||||||||| ||||||||||||| | ||||| |||||||||||| ||| |||| Sbjct: 65401 gggttctgcttggcgatctgctccttcccggcgctcttgtagtcgaagccgcagccgtgg 65342 Query: 384 gcgtcggcgtaccggtg-catcgagcagaaggtgtctccgcagcgacacttgaaccccgt 442 |||||||||| ||||| | | | |||||| || | ||||| || |||||||||||||| Sbjct: 65341 gcgtcggcgtggcggtggccgcca-cagaagttgccgccgcaccggcacttgaaccccgt 65283 Query: 443 tagcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 65282 cagccccaccttcttccggcacg 65260 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 317 gacgacggggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgca 376 |||||| || ||||||| ||||||| ||||||| |||| |||||||||||| ||| Sbjct: 60492 gacgaccggattctgcttggcgatcagctccctcccggagctcttgtagtcgaagccgca 60433 Query: 377 atcgtgcgcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaa 436 ||||| |||||||||| ||||| |||||| ||| | ||||| || |||||||| Sbjct: 60432 gccgtgctcgtcggcgtagcggtggccgccgcagaacgtgccgccgcaccggcacttgaa 60373 Query: 437 ccccgttagcccgaccttcttccggcacg 465 |||||| ||||| |||||| ||||||||| Sbjct: 60372 ccccgtcagccccaccttcctccggcacg 60344
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Plus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 32670834 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 32670893 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 32670894 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 32670953 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 32670954 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 32671013 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 32671014 ggcatgataagcaacggttactgggtggctt 32671044 Score = 61.9 bits (31), Expect = 3e-06 Identities = 117/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Plus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 |||||||||| ||||||||||||| | ||||| |||||||||||| ||| |||| Sbjct: 32678506 gggttctgcttggcgatctgctccttcccggcgctcttgtagtcgaagccgcagccgtgg 32678565 Query: 384 gcgtcggcgtaccggtg-catcgagcagaaggtgtctccgcagcgacacttgaaccccgt 442 |||||||||| ||||| | | | |||||| || | ||||| || |||||||||||||| Sbjct: 32678566 gcgtcggcgtggcggtggccgcca-cagaagttgccgccgcaccggcacttgaaccccgt 32678624 Query: 443 tagcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 32678625 cagccccaccttcttccggcacg 32678647 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 32671196 taacactttgagcacatgttttctgtcatccggctgcca 32671234 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 317 gacgacggggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgca 376 |||||| || ||||||| ||||||| ||||||| |||| |||||||||||| ||| Sbjct: 32683415 gacgaccggattctgcttggcgatcagctccctcccggagctcttgtagtcgaagccgca 32683474 Query: 377 atcgtgcgcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaa 436 ||||| |||||||||| ||||| |||||| ||| | ||||| || |||||||| Sbjct: 32683475 gccgtgctcgtcggcgtagcggtggccgccgcagaacgtgccgccgcaccggcacttgaa 32683534 Query: 437 ccccgttagcccgaccttcttccggcacg 465 |||||| ||||| |||||| ||||||||| Sbjct: 32683535 ccccgtcagccccaccttcctccggcacg 32683563 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaataaa 24 |||||||||||||||||||||| Sbjct: 20593686 ttattatatatatgtaaataaa 20593665
>gb|AY377427.1| Oryza sativa (japonica cultivar-group) putative zinc finger transcription factor ZFP38 (ZFP38) mRNA, complete cds Length = 854 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Minus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 515 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 456 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 455 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 396 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 395 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 336 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 335 ggcatgataagcaacggttactgggtggctt 305 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 153 taacactttgagcacatgttttctgtcatccggctgcca 115
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 7e-16 Identities = 170/211 (80%) Strand = Plus / Plus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| || || | || ||||| | ||| | Sbjct: 32761344 agaaccgccatcagattttggtgatcttgtcagctttcacaagaggattctgtttggcaa 32761403 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 32761404 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 32761463 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 32761464 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 32761523 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 32761524 ggcatgataagcaacggttactgggtggctt 32761554 Score = 61.9 bits (31), Expect = 3e-06 Identities = 117/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Plus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 |||||||||| ||||||||||||| | ||||| |||||||||||| ||| |||| Sbjct: 32769016 gggttctgcttggcgatctgctccttcccggcgctcttgtagtcgaagccgcagccgtgg 32769075 Query: 384 gcgtcggcgtaccggtg-catcgagcagaaggtgtctccgcagcgacacttgaaccccgt 442 |||||||||| ||||| | | | |||||| || | ||||| || |||||||||||||| Sbjct: 32769076 gcgtcggcgtggcggtggccgcca-cagaagttgccgccgcaccggcacttgaaccccgt 32769134 Query: 443 tagcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 32769135 cagccccaccttcttccggcacg 32769157 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 32761706 taacactttgagcacatgttttctgtcatccggctgcca 32761744 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 317 gacgacggggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgca 376 |||||| || ||||||| ||||||| ||||||| |||| |||||||||||| ||| Sbjct: 32773925 gacgaccggattctgcttggcgatcagctccctcccggagctcttgtagtcgaagccgca 32773984 Query: 377 atcgtgcgcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaa 436 ||||| |||||||||| ||||| |||||| ||| | ||||| || |||||||| Sbjct: 32773985 gccgtgctcgtcggcgtagcggtggccgccgcagaacgtgccgccgcaccggcacttgaa 32774044 Query: 437 ccccgttagcccgaccttcttccggcacg 465 |||||| ||||| |||||| ||||||||| Sbjct: 32774045 ccccgtcagccccaccttcctccggcacg 32774073 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaataaa 24 |||||||||||||||||||||| Sbjct: 20586715 ttattatatatatgtaaataaa 20586694
>ref|XM_476740.1| Oryza sativa (japonica cultivar-group), mRNA Length = 486 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 327 ttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcg 386 ||||||| ||| ||||| |||| |||||||| |||||||||||| |||| ||||| || Sbjct: 449 ttctgcttggcaatctgatcccggccggccttcttgtagtcgaaggtgcagtcgtgagct 390 Query: 387 tcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagc 446 |||| || ||||| | ||||||||||| ||||||| || |||| ||| || || || Sbjct: 389 tcggtataacggtgtgttgagcagaaggtacctccgcatcggcactggaagccagtcaga 330 Query: 447 ccgaccttcttccggcacgacaggcagcggttgctcggtggctt 490 || |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 329 ccaaccttcttacggcatgacaggcatcggttgctgggtggctt 286
>gb|AY282740.1| Oryza sativa (japonica cultivar-group) putative zinc finger transcription factor ZFP33 mRNA, complete cds Length = 727 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 327 ttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcg 386 ||||||| ||| ||||| |||| |||||||| |||||||||||| |||| ||||| || Sbjct: 454 ttctgcttggcaatctgatcccggccggccttcttgtagtcgaaggtgcagtcgtgagct 395 Query: 387 tcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagc 446 |||| || ||||| | ||||||||||| ||||||| || |||| ||| || || || Sbjct: 394 tcggtataacggtgtgttgagcagaaggtacctccgcatcggcactggaagccagtcaga 335 Query: 447 ccgaccttcttccggcacgacaggcagcggttgctcggtggctt 490 || |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 334 ccaaccttcttacggcatgacaggcatcggttgctgggtggctt 291
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 327 ttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcg 386 ||||||| ||| ||||| |||| |||||||| |||||||||||| |||| ||||| || Sbjct: 3708416 ttctgcttggcaatctgatcccggccggccttcttgtagtcgaaggtgcagtcgtgagct 3708475 Query: 387 tcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagc 446 |||| || ||||| | ||||||||||| ||||||| || |||| ||| || || || Sbjct: 3708476 tcggtataacggtgtgttgagcagaaggtacctccgcatcggcactggaagccagtcaga 3708535 Query: 447 ccgaccttcttccggcacgacaggcagcggttgctcggtggctt 490 || |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 3708536 ccaaccttcttacggcatgacaggcatcggttgctgggtggctt 3708579 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 350 gccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgt 393 ||||||| ||||||||||||| |||| |||||||| |||||| Sbjct: 3717400 gccggccgccttgtagtcgaacgagcaagcgtgcgcgccggcgt 3717443
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 327 ttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcg 386 ||||||| ||| ||||| |||| |||||||| |||||||||||| |||| ||||| || Sbjct: 52767 ttctgcttggcaatctgatcccggccggccttcttgtagtcgaaggtgcagtcgtgagct 52826 Query: 387 tcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagc 446 |||| || ||||| | ||||||||||| ||||||| || |||| ||| || || || Sbjct: 52827 tcggtataacggtgtgttgagcagaaggtacctccgcatcggcactggaagccagtcaga 52886 Query: 447 ccgaccttcttccggcacgacaggcagcggttgctcggtggctt 490 || |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 52887 ccaaccttcttacggcatgacaggcatcggttgctgggtggctt 52930 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 350 gccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgt 393 ||||||| ||||||||||||| |||| |||||||| |||||| Sbjct: 61751 gccggccgccttgtagtcgaacgagcaagcgtgcgcgccggcgt 61794
>dbj|AK121813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F24, full insert sequence Length = 887 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 327 ttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcg 386 ||||||| ||| ||||| |||| |||||||| |||||||||||| |||| ||||| || Sbjct: 605 ttctgcttggcaatctgatcccggccggccttcttgtagtcgaaggtgcagtcgtgagct 546 Query: 387 tcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagc 446 |||| || ||||| | ||||||||||| ||||||| || |||| ||| || || || Sbjct: 545 tcggtataacggtgtgttgagcagaaggtacctccgcatcggcactggaagccagtcaga 486 Query: 447 ccgaccttcttccggcacgacaggcagcggttgctcggtggctt 490 || |||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 485 ccaaccttcttacggcatgacaggcatcggttgctgggtggctt 442
>dbj|AK102503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095D08, full insert sequence Length = 1158 Score = 85.7 bits (43), Expect = 2e-13 Identities = 169/211 (80%) Strand = Plus / Minus Query: 280 agaacctccatcagaatctggtgaccttgtcagccttgacgacggggttctgctgggcga 339 |||||| |||||||| | |||||| ||||||||| | || | || ||||| | ||| | Sbjct: 726 agaaccgccatcagattttggtgatcttgtcagctctcacaagaggattctgtttggcaa 667 Query: 340 tctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgtaccggt 399 |||||||||| ||| |||||||||| || || |||| | ||| | ||||| || |||| Sbjct: 666 tctgctccctcccgacctgcttgtaatcaaatgtgcatttgtgtgaatcggcatagcggt 607 Query: 400 gcatcgagcagaaggtgtctccgcagcgacacttgaaccccgttagcccgaccttcttcc 459 |||| || ||||||||| |||||||||| |||||||| || || | ||| |||||||||| Sbjct: 606 gcattgaacagaaggtgcctccgcagcggcacttgaatcctgtcaacccaaccttcttcc 547 Query: 460 ggcacgacaggcagcggttgctcggtggctt 490 |||| || | ||| ||||| || |||||||| Sbjct: 546 ggcatgataagcaacggttactgggtggctt 516 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 648 taacactttgagcacatgttctctgtcatccggttgcca 686 |||||||||||||||||||| |||||||||||| ||||| Sbjct: 364 taacactttgagcacatgttttctgtcatccggctgcca 326
>dbj|AK108384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E10, full insert sequence Length = 1075 Score = 65.9 bits (33), Expect = 2e-07 Identities = 120/149 (80%) Strand = Plus / Minus Query: 317 gacgacggggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgca 376 |||||| || ||||||| ||||||| ||||||| |||| |||||||||||| ||| Sbjct: 780 gacgaccggattctgcttggcgatcagctccctcccggagctcttgtagtcgaagccgca 721 Query: 377 atcgtgcgcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaa 436 |||||| |||||||||| ||||| |||||| ||| | ||||| || |||||||| Sbjct: 720 gtcgtgctcgtcggcgtagcggtggccgccgcagaacgtgccgccgcaccggcacttgaa 661 Query: 437 ccccgttagcccgaccttcttccggcacg 465 |||||| ||||| |||||| ||||||||| Sbjct: 660 ccccgtcagccccaccttcctccggcacg 632
>ref|XM_469956.1| Oryza sativa (japonica cultivar-group), mRNA Length = 766 Score = 61.9 bits (31), Expect = 3e-06 Identities = 117/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 |||||||||| ||||||||||||| | ||||| |||||||||||| ||| |||| Sbjct: 540 gggttctgcttggcgatctgctccttcccggcgctcttgtagtcgaagccgcagccgtgg 481 Query: 384 gcgtcggcgtaccggtg-catcgagcagaaggtgtctccgcagcgacacttgaaccccgt 442 |||||||||| ||||| | | | |||||| || | ||||| || |||||||||||||| Sbjct: 480 gcgtcggcgtggcggtggccgcca-cagaagttgccgccgcaccggcacttgaaccccgt 422 Query: 443 tagcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 421 cagccccaccttcttccggcacg 399
>gb|AY526867.1| Oryza sativa (japonica cultivar-group) putative zinc finger transcription factor (ZFP48) mRNA, complete cds Length = 614 Score = 61.9 bits (31), Expect = 3e-06 Identities = 117/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 |||||||||| ||||||||||||| | ||||| |||||||||||| ||| |||| Sbjct: 540 gggttctgcttggcgatctgctccttcccggcgctcttgtagtcgaagccgcagccgtgg 481 Query: 384 gcgtcggcgtaccggtg-catcgagcagaaggtgtctccgcagcgacacttgaaccccgt 442 |||||||||| ||||| | | | |||||| || | ||||| || |||||||||||||| Sbjct: 480 gcgtcggcgtggcggtggccgcca-cagaagttgccgccgcaccggcacttgaaccccgt 422 Query: 443 tagcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 421 cagccccaccttcttccggcacg 399
>dbj|AK108205.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D04, full insert sequence Length = 766 Score = 61.9 bits (31), Expect = 3e-06 Identities = 117/143 (81%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 |||||||||| ||||||||||||| | ||||| |||||||||||| ||| |||| Sbjct: 540 gggttctgcttggcgatctgctccttcccggcgctcttgtagtcgaagccgcagccgtgg 481 Query: 384 gcgtcggcgtaccggtg-catcgagcagaaggtgtctccgcagcgacacttgaaccccgt 442 |||||||||| ||||| | | | |||||| || | ||||| || |||||||||||||| Sbjct: 480 gcgtcggcgtggcggtggccgcca-cagaagttgccgccgcaccggcacttgaaccccgt 422 Query: 443 tagcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 421 cagccccaccttcttccggcacg 399
>ref|XM_469958.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1075 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 317 gacgacggggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgca 376 |||||| || ||||||| ||||||| ||||||| |||| |||||||||||| ||| Sbjct: 780 gacgaccggattctgcttggcgatcagctccctcccggagctcttgtagtcgaagccgca 721 Query: 377 atcgtgcgcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaa 436 ||||| |||||||||| ||||| |||||| ||| | ||||| || |||||||| Sbjct: 720 gccgtgctcgtcggcgtagcggtggccgccgcagaacgtgccgccgcaccggcacttgaa 661 Query: 437 ccccgttagcccgaccttcttccggcacg 465 |||||| ||||| |||||| ||||||||| Sbjct: 660 ccccgtcagccccaccttcctccggcacg 632
>ref|XM_482578.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 ||||||| || |||||||| ||||| | || || |||| ||||||| |||| ||||| Sbjct: 641 gggttctccttggcgatcttctcccggtcgctcttcttgaagtcgaaggtgcaggcgtgc 582 Query: 384 gcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgtt 443 |||||||| |||||| |||||||||| ||| | ||||| || |||| ||| ||| Sbjct: 581 ttgtcggcgtggcggtgcgtcgagcagaacgtgccgccgcatcggcactcgaagcccagc 522 Query: 444 agcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 521 agccccaccttcttccggcacg 500
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 ||||||| || |||||||| ||||| | || || |||| ||||||| |||| ||||| Sbjct: 21198887 gggttctccttggcgatcttctcccggtcgctcttcttgaagtcgaaggtgcaggcgtgc 21198828 Query: 384 gcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgtt 443 |||||||| |||||| |||||||||| ||| | ||||| || |||| ||| ||| Sbjct: 21198827 ttgtcggcgtggcggtgcgtcgagcagaacgtgccgccgcatcggcactcgaagcccagc 21198768 Query: 444 agcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 21198767 agccccaccttcttccggcacg 21198746
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Minus Query: 324 gggttctgctgggcgatctgctccctgccggcctgcttgtagtcgaacttgcaatcgtgc 383 ||||||| || |||||||| ||||| | || || |||| ||||||| |||| ||||| Sbjct: 25164 gggttctccttggcgatcttctcccggtcgctcttcttgaagtcgaaggtgcaggcgtgc 25105 Query: 384 gcgtcggcgtaccggtgcatcgagcagaaggtgtctccgcagcgacacttgaaccccgtt 443 |||||||| |||||| |||||||||| ||| | ||||| || |||| ||| ||| Sbjct: 25104 ttgtcggcgtggcggtgcgtcgagcagaacgtgccgccgcatcggcactcgaagcccagc 25045 Query: 444 agcccgaccttcttccggcacg 465 ||||| |||||||||||||||| Sbjct: 25044 agccccaccttcttccggcacg 25023
>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence Length = 941 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 362 gtagtcgaacttgcaatcgtgcgcgtcggcgtaccggtg 400 ||||||||||||||| |||||| ||||| ||||||||| Sbjct: 565 gtagtcgaacttgcagtcgtgcttgtcggagtaccggtg 527
>emb|AL031290.1|HS774I24 Human DNA sequence from clone RP4-774I24 on chromosome 1q24.1-24.3 Contains the 3' end of the PLAC3 gene for placenta-specific 3 (PLAC3) and the 3' end of the ASTN gene for astrotactin, complete sequence Length = 121780 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 cattattatatatatgtaaataa 23 ||||||||||||||||||||||| Sbjct: 89476 cattattatatatatgtaaataa 89454
>gb|AC093661.4| Homo sapiens BAC clone RP11-472K22 from 4, complete sequence Length = 152381 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 atatatgtaaataaacagaaatg 32 ||||||||||||||||||||||| Sbjct: 63716 atatatgtaaataaacagaaatg 63694
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaataaa 24 |||||||||||||||||||||| Sbjct: 7443 ttattatatatatgtaaataaa 7422
>gb|AC113559.3| Homo sapiens chromosome 18, clone RP11-114J15, complete sequence Length = 145274 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ttatatatatgtaaataaacag 27 |||||||||||||||||||||| Sbjct: 55405 ttatatatatgtaaataaacag 55426 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaacag 27 ||||||||||||||||||||| Sbjct: 55434 tatatatatgtaaataaacag 55454
>gb|AC083760.5| Homo sapiens chromosome 18, clone CTD-388D15, complete sequence Length = 109851 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ttatatatatgtaaataaacag 27 |||||||||||||||||||||| Sbjct: 7421 ttatatatatgtaaataaacag 7400 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tatatatatgtaaataaacag 27 ||||||||||||||||||||| Sbjct: 7392 tatatatatgtaaataaacag 7372
>gb|AC016343.5| Homo sapiens chromosome 15, clone RP11-142M4, complete sequence Length = 177386 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 atatatatgtaaataaacagaa 29 |||||||||||||||||||||| Sbjct: 43715 atatatatgtaaataaacagaa 43694
>gb|AC051643.5| Homo sapiens chromosome 15, clone RP11-615L8, complete sequence Length = 158682 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 atatatatgtaaataaacagaa 29 |||||||||||||||||||||| Sbjct: 148735 atatatatgtaaataaacagaa 148714
>emb|BX005234.15| Zebrafish DNA sequence from clone DKEY-7J14 in linkage group 16, complete sequence Length = 222420 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 attatatatatgtaaataaacagaaa 30 |||||||||||| ||||||||||||| Sbjct: 220043 attatatatatgaaaataaacagaaa 220068
>gb|AF114909.1|AF114909 Saccharomyces paradoxus CBS2908 ATP synthase subunit 8 (ATP8) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2 attattatatatatgtaaataaacagaaat 31 |||||||||||||| |||||||||| |||| Sbjct: 382 attattatatatatataaataaacataaat 353
>gb|AF114919.1|AF114919 Saccharomyces paradoxus NRRL Y-17217 ATP synthase subunit 8 (ATP8) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 513 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2 attattatatatatgtaaataaacagaaat 31 |||||||||||||| |||||||||| |||| Sbjct: 382 attattatatatatataaataaacataaat 353
>gb|AF114934.1|AF114934 Saccharomyces sp. S6U ATP synthase subunit 8 (ATP8) gene, mitochondrial gene encoding mitochondrial protein, complete cds Length = 436 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2 attattatatatatgtaaataaacagaaat 31 |||||||||||||| |||||||||| |||| Sbjct: 317 attattatatatatataaataaacataaat 288
>ref|NM_124872.2| Arabidopsis thaliana ATRBP45A; RNA binding AT5G54900 (ATRBP45A) mRNA, complete cds Length = 1413 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 569 tgtgggtgacgatgcaacagcagcagcag 597 ||||| ||| ||||||||||||||||||| Sbjct: 91 tgtggatgatgatgcaacagcagcagcag 119
>gb|AC016158.4| Drosophila melanogaster clone BACR38H07, complete sequence Length = 172841 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 ggtgacgatgcaacagcagcagcag 597 ||||| ||||||||||||||||||| Sbjct: 26909 ggtgatgatgcaacagcagcagcag 26933
>gb|AC149480.1| Populus trichocarpa clone Pop1-048O04, complete sequence Length = 141416 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 attattatatatatgtaaata 22 ||||||||||||||||||||| Sbjct: 116792 attattatatatatgtaaata 116772
>gb|AC099603.15| Mus musculus chromosome 12, clone RP23-333M19, complete sequence Length = 206836 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tattatatatatgtaaataaa 24 ||||||||||||||||||||| Sbjct: 118429 tattatatatatgtaaataaa 118449
>emb|AL356421.10| Human DNA sequence from clone RP11-550C4 on chromosome 6 Contains the 3' end of the CD2AP gene for CD2-associated protein, the GPR111 gene for G protein-coupled receptor 111, the GPR115 gene for G protein-coupled receptor 115, the 5' end of a gene for novel protein similar to seven transmembrane receptor (Rhodopsin family), a novel gene and a ribosomal protein 27A (RPL27A) pseudogene, complete sequence Length = 170532 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 655 ttgagcacatgttctctgtca 675 ||||||||||||||||||||| Sbjct: 104097 ttgagcacatgttctctgtca 104077
>emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence Length = 164399 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 attattatatatatgtaaata 22 ||||||||||||||||||||| Sbjct: 101827 attattatatatatgtaaata 101847
>emb|AJ252268.1|DME252268 Drosophila melanogaster mRNA for capicua (cic gene) Length = 5175 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 ggtgacgatgcaacagcagcagcag 597 ||||| ||||||||||||||||||| Sbjct: 1140 ggtgatgatgcaacagcagcagcag 1164
>gb|AC104108.3| Homo sapiens chromosome 5 clone CTD-2037K23, complete sequence Length = 156572 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 attattatatatatgtaaata 22 ||||||||||||||||||||| Sbjct: 37130 attattatatatatgtaaata 37150
>ref|NM_080253.2| Drosophila melanogaster capicua CG5067-RA (cic), mRNA Length = 5143 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 ggtgacgatgcaacagcagcagcag 597 ||||| ||||||||||||||||||| Sbjct: 1140 ggtgatgatgcaacagcagcagcag 1164
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 atcaccattgaggaatataaa 260 ||||||||||||||||||||| Sbjct: 4827307 atcaccattgaggaatataaa 4827287
>gb|AF324983.2|AF324983 Arabidopsis thaliana AT5g54900 (AT5g54900/MBG8_17) mRNA, complete cds Length = 1395 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 569 tgtgggtgacgatgcaacagcagcagcag 597 ||||| ||| ||||||||||||||||||| Sbjct: 91 tgtggatgatgatgcaacagcagcagcag 119
>gb|AC091501.1|AC091501 Drosophila melanogaster, chromosome 2R, region 53D-53E, BAC clone BACR36P23, complete sequence Length = 198390 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tattatatatatgtaaataaa 24 ||||||||||||||||||||| Sbjct: 57510 tattatatatatgtaaataaa 57530
>gb|AC008364.5|AC008364 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone BACR09G02, complete sequence Length = 166642 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 ggtgacgatgcaacagcagcagcag 597 ||||| ||||||||||||||||||| Sbjct: 154686 ggtgatgatgcaacagcagcagcag 154710
>ref|NM_204317.1| Gallus gallus activin A receptor, type IIB (ACVR2B), mRNA Length = 1903 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 614 agtggccatcctcttggcctt 634 ||||||||||||||||||||| Sbjct: 714 agtggccatcctcttggcctt 734
>gb|BT024235.1| Drosophila melanogaster LD05430 full insert cDNA Length = 5175 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 ggtgacgatgcaacagcagcagcag 597 ||||| ||||||||||||||||||| Sbjct: 1141 ggtgatgatgcaacagcagcagcag 1165
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 gtgcgcgtcggcgtaccggtgcatc 404 ||||||| ||||||||||||||||| Sbjct: 509668 gtgcgcgccggcgtaccggtgcatc 509644
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 569 tgtgggtgacgatgcaacagcagcagcag 597 ||||| ||| ||||||||||||||||||| Sbjct: 54476 tgtggatgatgatgcaacagcagcagcag 54504
>gb|AE003729.3| Drosophila melanogaster chromosome 3R, section 67 of 118 of the complete sequence Length = 232477 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 ggtgacgatgcaacagcagcagcag 597 ||||| ||||||||||||||||||| Sbjct: 224638 ggtgatgatgcaacagcagcagcag 224662
>gb|AE003806.3| Drosophila melanogaster chromosome 2R, section 44 of 73 of the complete sequence Length = 271179 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tattatatatatgtaaataaa 24 ||||||||||||||||||||| Sbjct: 153054 tattatatatatgtaaataaa 153074
>emb|CT009740.17| Mouse DNA sequence from clone RP23-9N14 on chromosome 12, complete sequence Length = 143996 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tattatatatatgtaaataaa 24 ||||||||||||||||||||| Sbjct: 101522 tattatatatatgtaaataaa 101502
>gb|AC004287.1|AC004287 Drosophila melanogaster DNA sequence (P1 DS02309 (D166)), complete sequence Length = 70841 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tattatatatatgtaaataaa 24 ||||||||||||||||||||| Sbjct: 30026 tattatatatatgtaaataaa 30046
>gb|U31223.1|GGU31223 Gallus gallus activin receptor IIB mRNA, complete cds Length = 1903 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 614 agtggccatcctcttggcctt 634 ||||||||||||||||||||| Sbjct: 714 agtggccatcctcttggcctt 734
>gb|AC142244.11| Mus musculus chromosome 1, clone RP23-79H24, complete sequence Length = 132061 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 14762 ttattatatatatgtaaata 14743
>gb|AC138680.7| Mus musculus chromosome 1, clone RP23-373D7, complete sequence Length = 175790 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aaataaacagaaatgcacct 37 |||||||||||||||||||| Sbjct: 26601 aaataaacagaaatgcacct 26582
>gb|AC133286.15| Mus musculus chromosome 1, clone RP24-358J4, complete sequence Length = 169772 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 132664 tatatatatgtaaataaaca 132683
>gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosome 9, complete sequence Length = 142457 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 aagcatcatcatcaccattg 249 |||||||||||||||||||| Sbjct: 57541 aagcatcatcatcaccattg 57560
>gb|AC168149.7| Medicago truncatula clone mth2-84g4, complete sequence Length = 122726 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 attatatatatgtaaataaa 24 |||||||||||||||||||| Sbjct: 84463 attatatatatgtaaataaa 84444
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 109236 ttattatatatatgtaaata 109255
>ref|XM_476742.1| Oryza sativa (japonica cultivar-group), mRNA Length = 465 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 350 gccggcctgcttgtagtcgaacttgcaatcgtgcgcgtcggcgt 393 ||||||| ||||||||||||| |||| |||||||| |||||| Sbjct: 405 gccggccgccttgtagtcgaacgagcaagcgtgcgcgccggcgt 362
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 gcgcctcctcctcggctact 512 |||||||||||||||||||| Sbjct: 2885398 gcgcctcctcctcggctact 2885417
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 135401 ttattatatatatgtaaata 135382
>gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome 18, complete sequence Length = 179465 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 100758 ttattatatatatgtaaata 100777
>gb|AC166820.2| Mus musculus BAC clone RP24-287O2 from chromosome 15, complete sequence Length = 137033 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tatatatatgtaaataaacagaaa 30 |||||||||||| ||||||||||| Sbjct: 15112 tatatatatgtatataaacagaaa 15089
>gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, complete sequence Length = 205823 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 184680 tatatatatgtaaataaaca 184699
>gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosome 15, complete sequence Length = 172962 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 159247 tatatatatgtaaataaaca 159228
>gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, complete sequence Length = 235703 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 38284 ttattatatatatgtaaata 38303
>ref|XM_754214.1| Ustilago maydis 521 hypothetical protein (UM03160.1) partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 618 gccatcctcttggccttggc 637 |||||||||||||||||||| Sbjct: 99 gccatcctcttggccttggc 80
>gb|AC123858.4| Mus musculus BAC clone RP23-345K19 from chromosome 15, complete sequence Length = 203182 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 94696 tatatatatgtaaataaaca 94677
>gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, complete sequence Length = 205623 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aaataaacagaaatgcacct 37 |||||||||||||||||||| Sbjct: 178430 aaataaacagaaatgcacct 178411
>gb|AC121577.3| Mus musculus BAC clone RP23-244N5 from 15, complete sequence Length = 200103 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tatatatatgtaaataaacagaaa 30 |||||||||||| ||||||||||| Sbjct: 166380 tatatatatgtatataaacagaaa 166357
>emb|CR700545.3|CNS0G3HP Tetraodon nigroviridis full-length cDNA Length = 1032 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 gctccttcagcagaacctccatca 292 |||||||||||||||||| ||||| Sbjct: 543 gctccttcagcagaacctgcatca 566
>emb|CR698968.3|CNS0G29W Tetraodon nigroviridis full-length cDNA Length = 1037 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 gctccttcagcagaacctccatca 292 |||||||||||||||||| ||||| Sbjct: 548 gctccttcagcagaacctgcatca 571
>emb|CR696630.3|CNS0G0GY Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 gctccttcagcagaacctccatca 292 |||||||||||||||||| ||||| Sbjct: 560 gctccttcagcagaacctgcatca 583
>gb|AC162035.5| Mus musculus chromosome 18, clone RP23-434N7, complete sequence Length = 200472 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 39742 ttattatatatatgtaaata 39723
>emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 in linkage group 1, complete sequence Length = 103132 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 taaataaacagaaatgcacc 36 |||||||||||||||||||| Sbjct: 34792 taaataaacagaaatgcacc 34773
>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), two novel genes and one CpG island, complete sequence Length = 106342 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 18179 cgatgcaacagcagcagcag 18160
>emb|AL731765.5| Human DNA sequence from clone RP11-268L7 on chromosome X, complete sequence Length = 64790 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 651 cactttgagcacatgttctc 670 |||||||||||||||||||| Sbjct: 54147 cactttgagcacatgttctc 54166
>emb|AL590783.5| Human DNA sequence from clone RP11-397C12 on chromosome 1 Contains a novel gene, complete sequence Length = 157356 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 43855 ttattatatatatgtaaata 43874
>gb|AE014816.1| Plasmodium falciparum 3D7 chromosome 14 section 1 of 13 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tattatatatatgtaaataa 23 |||||||||||||||||||| Sbjct: 216633 tattatatatatgtaaataa 216614
>emb|AL353741.16| Human DNA sequence from clone RP11-575C20 on chromosome 9 Contains a general transcription factor IIIA (GTF3A) pseudogene, a novel gene (DVS27) and a CpG island, complete sequence Length = 199517 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 cactttgagcacatgttctc 670 |||||||||||||||||||| Sbjct: 168181 cactttgagcacatgttctc 168162
>emb|AL162738.12| Human DNA sequence from clone RP5-1110L4 on chromosome 1p35.3-36.13 Contains the 5' end of a novel gene, complete sequence Length = 121828 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 attatatatatgtaaataaa 24 |||||||||||||||||||| Sbjct: 100189 attatatatatgtaaataaa 100208
>emb|AL160257.12| Human DNA sequence from clone RP11-77O2 on chromosome 13, complete sequence Length = 62107 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tattatatatatgtaaataa 23 |||||||||||||||||||| Sbjct: 56122 tattatatatatgtaaataa 56141
>gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, complete sequence Length = 185185 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttatatatatgtaaataaac 25 |||||||||||||||||||| Sbjct: 93931 ttatatatatgtaaataaac 93950
>emb|AL137009.8| Human DNA sequence from clone RP3-370O5 on chromosome 6 Contains the 5' end of a novel gene containing FLJ13942 and a CpG island, complete sequence Length = 113254 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 651 cactttgagcacatgttctc 670 |||||||||||||||||||| Sbjct: 84706 cactttgagcacatgttctc 84725
>ref|XM_786287.1| PREDICTED: Strongylocentrotus purpuratus similar to Coiled-coil domain containing protein 11 (LOC586508), mRNA Length = 2384 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 tggccatcctcttggccttg 635 |||||||||||||||||||| Sbjct: 688 tggccatcctcttggccttg 669
>gb|AC158777.3| Mus musculus chromosome 15, clone RP24-354I13, complete sequence Length = 175668 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 120955 ttattatatatatgtaaata 120974
>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192046 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 cactttgagcacatgttctc 670 |||||||||||||||||||| Sbjct: 89955 cactttgagcacatgttctc 89936
>emb|AJ252124.1|DME252124 Drosophila melanogaster mRNA for SoxNeuro (SoxN gene) Length = 2901 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 2290 cgatgcaacagcagcagcag 2309
>emb|CR394532.14| Zebrafish DNA sequence from clone CH211-278L9 in linkage group 19, complete sequence Length = 148777 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 64294 tatatatatgtaaataaaca 64313
>emb|AL662802.14| Mouse DNA sequence from clone RP23-34N10 on chromosome 11, complete sequence Length = 224024 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 216765 tatatatatgtaaataaaca 216784
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gatctgctccctgccggcctgctt 361 |||| ||||||||||||||||||| Sbjct: 4431373 gatcagctccctgccggcctgctt 4431396
>gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete sequence Length = 92727 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 attatatatatgtaaataaa 24 |||||||||||||||||||| Sbjct: 73988 attatatatatgtaaataaa 74007
>gb|AC166147.8| Medicago truncatula clone mth2-145g3, complete sequence Length = 126336 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 attatatatatgtaaataaa 24 |||||||||||||||||||| Sbjct: 123564 attatatatatgtaaataaa 123545
>gb|AC114497.1| Homo sapiens chromosome 1 clone RP11-568G23, complete sequence Length = 127715 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tatatatatgtaaataaacagaaa 30 ||||||||| |||||||||||||| Sbjct: 11129 tatatatatataaataaacagaaa 11106
>ref|NM_079996.2| Drosophila melanogaster SoxNeuro CG18024-RA (SoxN), mRNA Length = 4046 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 2431 cgatgcaacagcagcagcag 2450
>dbj|AK164889.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930049B06 product:Hypothetical metallo-dependent hydrolases structure containing protein homolog [Mus musculus], full insert sequence Length = 2087 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 1477 ttattatatatatgtaaata 1496
>ref|NM_031892.1| Homo sapiens SH3-domain kinase binding protein 1 (SH3KBP1), transcript variant 1, mRNA Length = 3348 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 57 cgatgcaacagcagcagcag 76
>gb|AC160973.4| Mus musculus BAC clone RP24-171J16 from chromosome 6, complete sequence Length = 159284 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 25038 ttattatatatatgtaaata 25057
>gb|AC093045.1| Drosophila melanogaster, chromosome 2L, region 29E-29E, BAC clone BACR01O16, complete sequence Length = 189904 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 68831 cgatgcaacagcagcagcag 68850
>emb|AL844567.22| Zebrafish DNA sequence from clone DKEY-77D17 in linkage group 16, complete sequence Length = 174845 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tatatgtaaataaacagaaa 30 |||||||||||||||||||| Sbjct: 92668 tatatgtaaataaacagaaa 92649
>gb|AC139933.2| Homo sapiens 3 BAC RP11-408F14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 68488 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 651 cactttgagcacatgttctc 670 |||||||||||||||||||| Sbjct: 5630 cactttgagcacatgttctc 5611
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 attattatatatatgtaaat 21 |||||||||||||||||||| Sbjct: 16438 attattatatatatgtaaat 16457
>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence Length = 205069 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 caacagcagcagcagttttg 602 |||||||||||||||||||| Sbjct: 61793 caacagcagcagcagttttg 61774
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tctgctgggcgatctgctcc 347 |||||||||||||||||||| Sbjct: 146858 tctgctgggcgatctgctcc 146839
>emb|BX571693.1| Carp DNA sequence from clone carpf-GC2H, complete sequence Length = 34667 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaacagaaa 30 ||||||||| |||||||||||||| Sbjct: 4471 tatatatatttaaataaacagaaa 4494
>gb|AF230904.1|AF230904 Homo sapiens c-Cbl-interacting protein (CIN85) mRNA, complete cds Length = 3348 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 57 cgatgcaacagcagcagcag 76
>gb|AC109185.15| Mus musculus chromosome 15, clone RP24-543J20, complete sequence Length = 179776 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 139745 ttattatatatatgtaaata 139764
>emb|BX649419.6| Zebrafish DNA sequence from clone CH211-106J5 in linkage group 22, complete sequence Length = 172908 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aaacagaaatgcacctgtac 41 |||||||||||||||||||| Sbjct: 134622 aaacagaaatgcacctgtac 134641
>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete sequence Length = 262557 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 158426 cgatgcaacagcagcagcag 158445
>gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, complete sequence Length = 153471 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ttatatatatgtaaataaac 25 |||||||||||||||||||| Sbjct: 137892 ttatatatatgtaaataaac 137873
>gb|AC102601.8| Mus musculus chromosome 1, clone RP23-379D23, complete sequence Length = 181908 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tatatatatgtaaataaaca 26 |||||||||||||||||||| Sbjct: 99476 tatatatatgtaaataaaca 99495
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gatctgctccctgccggcctgctt 361 |||| ||||||||||||||||||| Sbjct: 4433899 gatcagctccctgccggcctgctt 4433922
>gb|AC005416.1|AC005416 Drosophila melanogaster DNA sequence (P1 DS00901 (D289)), complete sequence Length = 57336 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 38953 cgatgcaacagcagcagcag 38934
>gb|BT001514.1| Drosophila melanogaster LD44245 full insert cDNA Length = 3207 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 cgatgcaacagcagcagcag 597 |||||||||||||||||||| Sbjct: 1574 cgatgcaacagcagcagcag 1593
>gb|AC132334.3| Mus musculus BAC clone RP24-228N8 from 6, complete sequence Length = 150109 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttattatatatatgtaaata 22 |||||||||||||||||||| Sbjct: 51063 ttattatatatatgtaaata 51044
>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 104913 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 651 cactttgagcacatgttctc 670 |||||||||||||||||||| Sbjct: 63347 cactttgagcacatgttctc 63366
>emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chromosome 2, complete sequence Length = 221723 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cattattatatatatgtaaa 20 |||||||||||||||||||| Sbjct: 149108 cattattatatatatgtaaa 149089
>gb|U08816.1|MMU08816 Mus musculus Ig alpha gene, intron 5 Length = 1890 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 514 gcttgccttctttggctgag 533 |||||||||||||||||||| Sbjct: 391 gcttgccttctttggctgag 372
>emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chromosome 9, complete sequence Length = 175790 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 aagcatcatcatcaccattg 249 |||||||||||||||||||| Sbjct: 50612 aagcatcatcatcaccattg 50631
>emb|AL844189.5| Mouse DNA sequence from clone RP23-167P8 on chromosome X, complete sequence Length = 38266 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 caacagcagcagcagttttg 602 |||||||||||||||||||| Sbjct: 11245 caacagcagcagcagttttg 11226
>emb|AL672033.12| Mouse DNA sequence from clone RP23-436F2 on chromosome X, complete sequence Length = 181933 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cattattatatatatgtaaataaa 24 ||||||||||||||| |||||||| Sbjct: 47466 cattattatatatatttaaataaa 47489
>emb|AL806531.12| Mouse DNA sequence from clone RP23-188K22 on chromosome X, complete sequence Length = 70515 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cacaattctgaagtaaacct 221 |||||||||||||||||||| Sbjct: 26470 cacaattctgaagtaaacct 26489
>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete sequence Length = 220050 Score = 40.1 bits (20), Expect = 9.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 529 ctgagccagatg-cttcatccttcatct 555 |||||||||||| ||||||||||||||| Sbjct: 215279 ctgagccagatgtcttcatccttcatct 215252
>dbj|D17295.1|HAMCLA Hamster mRNA for cyclinA, complete cds Length = 2693 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 attatatatatgtaaataaa 24 |||||||||||||||||||| Sbjct: 2656 attatatatatgtaaataaa 2675
>dbj|AB011390.1| Suncus murinus mitochondrial genes for tRNA-Thr, tRNA-Pro, tRNA-Phe and D-loop region, complete sequence, isolate BAN-108A Length = 1952 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 attattatatatatgtaaataaac 25 ||||||||||||||||| |||||| Sbjct: 1851 attattatatatatgtatataaac 1874 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,401,374 Number of Sequences: 3902068 Number of extensions: 7401374 Number of successful extensions: 202388 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 201244 Number of HSP's gapped (non-prelim): 1137 length of query: 686 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 663 effective length of database: 17,143,297,704 effective search space: 11366006377752 effective search space used: 11366006377752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
