ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12n01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507338.1| PREDICTED Oryza sativa (japonica cultivar-group... 250 4e-63
2ref|XM_483778.1| Oryza sativa (japonica cultivar-group), mRNA 250 4e-63
3dbj|AK101389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
4dbj|AK119519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
6dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
7dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
9gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 52 0.002
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
12ref|XM_537688.2| PREDICTED: Canis familiaris similar to serine c... 50 0.008
13ref|XM_470836.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.032
14ref|XM_875922.1| PREDICTED: Bos taurus similar to serine carboxy... 48 0.032
15ref|XM_865361.1| PREDICTED: Bos taurus similar to serine carboxy... 48 0.032
16ref|XM_581279.2| PREDICTED: Bos taurus similar to serine carboxy... 48 0.032
17gb|AY448014.1|AY448010S5 Ipomoea trifida haplotype S1 self-incom... 48 0.032
18gb|BC111297.1| Bos taurus similar to serine carboxypeptidase 1 p... 48 0.032
19dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.032
20emb|AL589670.21| Mouse DNA sequence from clone RP23-414K1 on chr... 46 0.13
21gb|AC012504.7| Homo sapiens BAC clone RP11-469O11 from 4, comple... 44 0.49
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
23dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
24dbj|AK101262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
25dbj|AK058801.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
26ref|XM_470825.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
27gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genom... 42 2.0
28gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, com... 42 2.0
29gb|AC022149.3|AC022149 Homo sapiens chromosome 19 clone CTD-3093... 42 2.0
30dbj|AP002054.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.0
31dbj|AK103605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
32gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, co... 40 7.7
33gb|AY451394.1| Mus musculus acetyl-CoA carboxylase 2 (Acacb) mRN... 40 7.7
34gb|AY344985.1| Sporisorium occidentale internal transcribed spac... 40 7.7
35gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosom... 40 7.7
36gb|AC004514.1|HUAC004514 Homo sapiens Chromosome 16 BAC clone CI... 40 7.7
37emb|AJ002369.1|AODPPIV Aspergillus oryzae dppIV gene 40 7.7
38gb|AC011773.9| Homo sapiens chromosome 8, clone RP11-219B4, comp... 40 7.7
39gb|AC119049.1| Homo sapiens chromosome 16 clone CTA-464C10, comp... 40 7.7
40dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 7.7
41gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 geno... 40 7.7
42dbj|AK147463.1| Mus musculus 14 days pregnant adult female place... 40 7.7
43gb|AC040159.4|AC040159 Homo sapiens chromosome 16 clone CTC-253B... 40 7.7
44gb|AC009310.3| Homo sapiens BAC clone RP11-302A6 from 2, complet... 40 7.7
45gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, comp... 40 7.7
46gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell... 40 7.7
47dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12,... 40 7.7
48gb|AY740043.1| Sporisorium andropogonis internal transcribed spa... 40 7.7
49gb|AY740042.1| Sporisorium andropogonis internal transcribed spa... 40 7.7
50ref|NM_133904.1| Mus musculus acetyl-Coenzyme A carboxylase beta... 40 7.7 
>ref|XM_507338.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.41 mRNA
          Length = 1747

 Score =  250 bits (126), Expect = 4e-63
 Identities = 315/378 (83%)
 Strand = Plus / Minus

                                                                        
Query: 187  tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
            ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 1496 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 1437

                                                                        
Query: 247  gtcgatcggtatcatgtggccagctccgagtatccagtagaatttcaggttcttgtacga 306
            ||| || |||| ||||||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 1436 gtctattggtaccatgtggccagctcccagtatccagtagaatttgagattcttgtaaga 1377

                                                                        
Query: 307  cttgagaaaggcctgggtgccggctgcttcacccgccttgcagtagagcggctttctggg 366
             ||||| ||||| |||||||| |||||||||||  |  ||||||||||||||  |||| |
Sbjct: 1376 tttgaggaaggcttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcg 1317

                                                                        
Query: 367  cgagtctgtgaagttcttaaggccttcccacttgagcttctggacccagtccagtgttcc 426
             |||| |||||||||||| || || ||||||||||| ||||| | ||| |||| ||||||
Sbjct: 1316 tgagtttgtgaagttcttcagaccatcccacttgagtttctgaatccaatccaatgttcc 1257

                                                                        
Query: 427  cttggttgcgcagatgagatcgagctgtccgctgtatatggtcacttccactccaaattt 486
            |||||| || ||||| ||||| ||||||||||| || || || || |  |  ||||  ||
Sbjct: 1256 cttggtcgcacagatcagatcaagctgtccgctatagattgtgacgttgaggccaaggtt 1197

                                                                        
Query: 487  gaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttggaa 546
            ||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |||
Sbjct: 1196 gagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcgaa 1137

                              
Query: 547  gacgtcgcccgactgctc 564
             || ||| | ||||||||
Sbjct: 1136 cacatcgtctgactgctc 1119
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>ref|XM_483778.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1744

 Score =  250 bits (126), Expect = 4e-63
 Identities = 315/378 (83%)
 Strand = Plus / Minus

                                                                        
Query: 187  tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
            ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 1503 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 1444

                                                                        
Query: 247  gtcgatcggtatcatgtggccagctccgagtatccagtagaatttcaggttcttgtacga 306
            ||| || |||| ||||||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 1443 gtctattggtaccatgtggccagctcccagtatccagtagaatttgagattcttgtaaga 1384

                                                                        
Query: 307  cttgagaaaggcctgggtgccggctgcttcacccgccttgcagtagagcggctttctggg 366
             ||||| ||||| |||||||| |||||||||||  |  ||||||||||||||  |||| |
Sbjct: 1383 tttgaggaaggcttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcg 1324

                                                                        
Query: 367  cgagtctgtgaagttcttaaggccttcccacttgagcttctggacccagtccagtgttcc 426
             |||| |||||||||||| || || ||||||||||| ||||| | ||| |||| ||||||
Sbjct: 1323 tgagtttgtgaagttcttcagaccatcccacttgagtttctgaatccaatccaatgttcc 1264

                                                                        
Query: 427  cttggttgcgcagatgagatcgagctgtccgctgtatatggtcacttccactccaaattt 486
            |||||| || ||||| ||||| ||||||||||| || || || || |  |  ||||  ||
Sbjct: 1263 cttggtcgcacagatcagatcaagctgtccgctatagattgtgacgttgaggccaaggtt 1204

                                                                        
Query: 487  gaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttggaa 546
            ||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |||
Sbjct: 1203 gagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcgaa 1144

                              
Query: 547  gacgtcgcccgactgctc 564
             || ||| | ||||||||
Sbjct: 1143 cacatcgtctgactgctc 1126
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>dbj|AK101389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036J23, full
            insert sequence
          Length = 1744

 Score =  250 bits (126), Expect = 4e-63
 Identities = 315/378 (83%)
 Strand = Plus / Minus

                                                                        
Query: 187  tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
            ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 1503 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 1444

                                                                        
Query: 247  gtcgatcggtatcatgtggccagctccgagtatccagtagaatttcaggttcttgtacga 306
            ||| || |||| ||||||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 1443 gtctattggtaccatgtggccagctcccagtatccagtagaatttgagattcttgtaaga 1384

                                                                        
Query: 307  cttgagaaaggcctgggtgccggctgcttcacccgccttgcagtagagcggctttctggg 366
             ||||| ||||| |||||||| |||||||||||  |  ||||||||||||||  |||| |
Sbjct: 1383 tttgaggaaggcttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcg 1324

                                                                        
Query: 367  cgagtctgtgaagttcttaaggccttcccacttgagcttctggacccagtccagtgttcc 426
             |||| |||||||||||| || || ||||||||||| ||||| | ||| |||| ||||||
Sbjct: 1323 tgagtttgtgaagttcttcagaccatcccacttgagtttctgaatccaatccaatgttcc 1264

                                                                        
Query: 427  cttggttgcgcagatgagatcgagctgtccgctgtatatggtcacttccactccaaattt 486
            |||||| || ||||| ||||| ||||||||||| || || || || |  |  ||||  ||
Sbjct: 1263 cttggtcgcacagatcagatcaagctgtccgctatagattgtgacgttgaggccaaggtt 1204

                                                                        
Query: 487  gaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttggaa 546
            ||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |||
Sbjct: 1203 gagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcgaa 1144

                              
Query: 547  gacgtcgcccgactgctc 564
             || ||| | ||||||||
Sbjct: 1143 cacatcgtctgactgctc 1126
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>dbj|AK119519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C12, full
            insert sequence
          Length = 1747

 Score =  242 bits (122), Expect = 1e-60
 Identities = 314/378 (83%)
 Strand = Plus / Minus

                                                                        
Query: 187  tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
            ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 1496 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 1437

                                                                        
Query: 247  gtcgatcggtatcatgtggccagctccgagtatccagtagaatttcaggttcttgtacga 306
            ||| || |||| ||||||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 1436 gtctattggtaccatgtggccagctcccagtatccagtagaatttgagattcttgtaaga 1377

                                                                        
Query: 307  cttgagaaaggcctgggtgccggctgcttcacccgccttgcagtagagcggctttctggg 366
             ||||| ||||| |||||||| |||||||||||  |  ||||||||||||||  |||| |
Sbjct: 1376 tttgaggaaggcttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcg 1317

                                                                        
Query: 367  cgagtctgtgaagttcttaaggccttcccacttgagcttctggacccagtccagtgttcc 426
             |||| |||||||||||| || || ||||||||||| ||||| | ||| |||| ||| ||
Sbjct: 1316 tgagtttgtgaagttcttcagaccatcccacttgagtttctgaatccaatccaatgtacc 1257

                                                                        
Query: 427  cttggttgcgcagatgagatcgagctgtccgctgtatatggtcacttccactccaaattt 486
            |||||| || ||||| ||||| ||||||||||| || || || || |  |  ||||  ||
Sbjct: 1256 cttggtcgcacagatcagatcaagctgtccgctatagattgtgacgttgaggccaaggtt 1197

                                                                        
Query: 487  gaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttggaa 546
            ||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |||
Sbjct: 1196 gagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcgaa 1137

                              
Query: 547  gacgtcgcccgactgctc 564
             || ||| | ||||||||
Sbjct: 1136 cacatcgtctgactgctc 1119
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  117 bits (59), Expect = 4e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                            
Query: 259      catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
                ||||||||||||||| ||||||||||||||||| || |||||||| || ||||| |||||
Sbjct: 28066615 catgtggccagctcccagtatccagtagaatttgagattcttgtaagatttgaggaaggc 28066556

                                                                            
Query: 319      ctgggtgccggctgcttcacccgccttgcagtagagcggctttctgggcgagtctgtgaa 378
                 |||||||| |||||||||||  |  ||||||||||||||  |||| | |||| ||||||
Sbjct: 28066555 ttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcgtgagtttgtgaa 28066496

                                   
Query: 379      gttcttaaggccttcccac 397
                |||||| || || ||||||
Sbjct: 28066495 gttcttcagaccatcccac 28066477



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                            
Query: 187      tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
                ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 28067127 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 28067068

                   
Query: 247      gtc 249
                |||
Sbjct: 28067067 gtc 28067065



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 396      acttgagcttctggacccagtccagtgttcccttggttgcgcagatgagatcgagctg 453
                ||||||| ||||| | ||| |||| |||||||||||| || ||||| ||||| |||||
Sbjct: 28066356 acttgagtttctgaatccaatccaatgttcccttggtcgcacagatcagatcaagctg 28066299



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                            
Query: 485      ttgaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttgg 544
                ||||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |
Sbjct: 28065407 ttgagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcg 28065348

                                    
Query: 545      aagacgtcgcccgactgctc 564
                || || ||| | ||||||||
Sbjct: 28065347 aacacatcgtctgactgctc 28065328
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>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0562A06
          Length = 154198

 Score =  117 bits (59), Expect = 4e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                          
Query: 259    catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
              ||||||||||||||| ||||||||||||||||| || |||||||| || ||||| |||||
Sbjct: 144107 catgtggccagctcccagtatccagtagaatttgagattcttgtaagatttgaggaaggc 144048

                                                                          
Query: 319    ctgggtgccggctgcttcacccgccttgcagtagagcggctttctgggcgagtctgtgaa 378
               |||||||| |||||||||||  |  ||||||||||||||  |||| | |||| ||||||
Sbjct: 144047 ttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcgtgagtttgtgaa 143988

                                 
Query: 379    gttcttaaggccttcccac 397
              |||||| || || ||||||
Sbjct: 143987 gttcttcagaccatcccac 143969



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                          
Query: 187    tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
              ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 144619 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 144560

                 
Query: 247    gtc 249
              |||
Sbjct: 144559 gtc 144557



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 396    acttgagcttctggacccagtccagtgttcccttggttgcgcagatgagatcgagctg 453
              ||||||| ||||| | ||| |||| |||||||||||| || ||||| ||||| |||||
Sbjct: 143848 acttgagtttctgaatccaatccaatgttcccttggtcgcacagatcagatcaagctg 143791



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                          
Query: 485    ttgaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttgg 544
              ||||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |
Sbjct: 142899 ttgagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcg 142840

                                  
Query: 545    aagacgtcgcccgactgctc 564
              || || ||| | ||||||||
Sbjct: 142839 aacacatcgtctgactgctc 142820
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>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0604E01
          Length = 159049

 Score =  117 bits (59), Expect = 4e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                         
Query: 259   catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
             ||||||||||||||| ||||||||||||||||| || |||||||| || ||||| |||||
Sbjct: 64110 catgtggccagctcccagtatccagtagaatttgagattcttgtaagatttgaggaaggc 64051

                                                                         
Query: 319   ctgggtgccggctgcttcacccgccttgcagtagagcggctttctgggcgagtctgtgaa 378
              |||||||| |||||||||||  |  ||||||||||||||  |||| | |||| ||||||
Sbjct: 64050 ttgggtgccagctgcttcaccaccactgcagtagagcggcactctgcgtgagtttgtgaa 63991

                                
Query: 379   gttcttaaggccttcccac 397
             |||||| || || ||||||
Sbjct: 63990 gttcttcagaccatcccac 63972



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 187   tttctaccgagcaggagaatgtgtaatgtcacccagcatcttgagtgcagggcaagggtt 246
             ||||||| |||||||||| |||||||||||||| |||||||| | |||||||||||||||
Sbjct: 64622 tttctactgagcaggagattgtgtaatgtcaccaagcatcttcaatgcagggcaagggtt 64563

                
Query: 247   gtc 249
             |||
Sbjct: 64562 gtc 64560



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 396   acttgagcttctggacccagtccagtgttcccttggttgcgcagatgagatcgagctg 453
             ||||||| ||||| | ||| |||| |||||||||||| || ||||| ||||| |||||
Sbjct: 63851 acttgagtttctgaatccaatccaatgttcccttggtcgcacagatcagatcaagctg 63794



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                         
Query: 485   ttgaggagctcgtcaacctcgttgattcttggcttcatgaagtcgcctgcgagggcttgg 544
             ||||| |||||||| |||||   |||||| || ||||||||||| ||||| || |||| |
Sbjct: 62902 ttgagaagctcgtcgacctcaaggattctgggtttcatgaagtctcctgcaagagcttcg 62843

                                 
Query: 545   aagacgtcgcccgactgctc 564
             || || ||| | ||||||||
Sbjct: 62842 aacacatcgtctgactgctc 62823
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 500      acctcgttgattcttggcttcatgaa 525
                ||||||||||||||||||||||||||
Sbjct: 15664254 acctcgttgattcttggcttcatgaa 15664279



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 266      ccagctccgagtatccagtagaatttcaggttcttgta 303
                ||||| || |||||||||||||| | ||||||||||||
Sbjct: 15662932 ccagccccaagtatccagtagaaatgcaggttcttgta 15662969



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 263      tggccagctccgagtatccagtagaatttcaggttcttgta 303
                ||||||||||| || ||||||||||| | |||||| |||||
Sbjct: 15602105 tggccagctccaaggatccagtagaaatgcaggtttttgta 15602145
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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
             sequence
          Length = 178748

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 500   acctcgttgattcttggcttcatgaa 525
             ||||||||||||||||||||||||||
Sbjct: 74208 acctcgttgattcttggcttcatgaa 74233



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 266   ccagctccgagtatccagtagaatttcaggttcttgta 303
             ||||| || |||||||||||||| | ||||||||||||
Sbjct: 72886 ccagccccaagtatccagtagaaatgcaggttcttgta 72923



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 263   tggccagctccgagtatccagtagaatttcaggttcttgta 303
             ||||||||||| || ||||||||||| | |||||| |||||
Sbjct: 12059 tggccagctccaaggatccagtagaaatgcaggtttttgta 12099
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 500      acctcgttgattcttggcttcatgaa 525
                ||||||||||||||||||||||||||
Sbjct: 15658788 acctcgttgattcttggcttcatgaa 15658813



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 266      ccagctccgagtatccagtagaatttcaggttcttgta 303
                ||||| || |||||||||||||| | ||||||||||||
Sbjct: 15657466 ccagccccaagtatccagtagaaatgcaggttcttgta 15657503



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 263      tggccagctccgagtatccagtagaatttcaggttcttgta 303
                ||||||||||| || ||||||||||| | |||||| |||||
Sbjct: 15596639 tggccagctccaaggatccagtagaaatgcaggtttttgta 15596679
to top
>dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-E02, full
            insert sequence
          Length = 2362

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 500  acctcgttgattcttggcttcatgaa 525
            ||||||||||||||||||||||||||
Sbjct: 1393 acctcgttgattcttggcttcatgaa 1368



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 266  ccagctccgagtatccagtagaatttcaggttcttgta 303
            ||||| || |||||||||||||| | ||||||||||||
Sbjct: 1720 ccagccccaagtatccagtagaaatgcaggttcttgta 1683
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>ref|XM_537688.2| PREDICTED: Canis familiaris similar to serine carboxypeptidase 1
            precursor protein (LOC480566), mRNA
          Length = 1958

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 259  catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttga 311
            |||||| ||||||| ||| |||||||||||   |||||||||||| |||||||
Sbjct: 1371 catgtgcccagctctgaggatccagtagaaagccaggttcttgtaggacttga 1319
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>ref|XM_470836.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1854

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 502  ctcgttgattcttggcttcatgaa 525
            ||||||||||||||||||||||||
Sbjct: 1107 ctcgttgattcttggcttcatgaa 1084
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>ref|XM_875922.1| PREDICTED: Bos taurus similar to serine carboxypeptidase 1 precursor
            protein, transcript variant 3 (LOC505054), mRNA
          Length = 1927

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 259  catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
            |||||| ||||||| ||| |||||||||||   ||| |||||||| ||||||| ||||||
Sbjct: 1326 catgtgtccagctctgagaatccagtagaaagccagattcttgtaggacttgacaaaggc 1267
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>ref|XM_865361.1| PREDICTED: Bos taurus similar to serine carboxypeptidase 1 precursor
            protein, transcript variant 2 (LOC505054), mRNA
          Length = 1924

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 259  catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
            |||||| ||||||| ||| |||||||||||   ||| |||||||| ||||||| ||||||
Sbjct: 1323 catgtgtccagctctgagaatccagtagaaagccagattcttgtaggacttgacaaaggc 1264
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>ref|XM_581279.2| PREDICTED: Bos taurus similar to serine carboxypeptidase 1
           precursor protein, transcript variant 1 (LOC505054),
           mRNA
          Length = 1382

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 259 catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
           |||||| ||||||| ||| |||||||||||   ||| |||||||| ||||||| ||||||
Sbjct: 781 catgtgtccagctctgagaatccagtagaaagccagattcttgtaggacttgacaaaggc 722
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>gb|AY448014.1|AY448010S5 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus,
           contig SR5
          Length = 7191

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 266 ccagctccgagtatccagtagaatttcaggttcttgtacgactt 309
           |||||||| || ||||||||||| | |||||||||||| |||||
Sbjct: 234 ccagctccaagaatccagtagaaatgcaggttcttgtatgactt 277
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>gb|BC111297.1| Bos taurus similar to serine carboxypeptidase 1 precursor protein,
            transcript variant 2, mRNA (cDNA clone MGC:133818
            IMAGE:8064139), complete cds
          Length = 1913

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 259  catgtggccagctccgagtatccagtagaatttcaggttcttgtacgacttgagaaaggc 318
            |||||| ||||||| ||| |||||||||||   ||| |||||||| ||||||| ||||||
Sbjct: 1292 catgtgtccagctctgagaatccagtagaaagccagattcttgtaggacttgacaaaggc 1233
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>dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034H21, full
            insert sequence
          Length = 1555

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 502  ctcgttgattcttggcttcatgaa 525
            ||||||||||||||||||||||||
Sbjct: 1145 ctcgttgattcttggcttcatgaa 1122



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 266  ccagctccgagtatccagtagaatttcaggttcttgta 303
            ||||| || |||||||||||||| | ||||||||||||
Sbjct: 1375 ccagccccaagtatccagtagaaatgcaggttcttgta 1338
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>emb|AL589670.21| Mouse DNA sequence from clone RP23-414K1 on chromosome 15, complete
             sequence
          Length = 203230

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 149   gttggtgtcaggctgcttggtgc 171
             |||||||||||||||||||||||
Sbjct: 26886 gttggtgtcaggctgcttggtgc 26864
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>gb|AC012504.7| Homo sapiens BAC clone RP11-469O11 from 4, complete sequence
          Length = 205886

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 58     tttatctctcttttctcatctt 79
              ||||||||||||||||||||||
Sbjct: 182950 tttatctctcttttctcatctt 182929
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 170      gcgtcgccgtcgtcttctttct 191
                ||||||||||||||||||||||
Sbjct: 11057487 gcgtcgccgtcgtcttctttct 11057508
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>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 170   gcgtcgccgtcgtcttctttct 191
             ||||||||||||||||||||||
Sbjct: 86369 gcgtcgccgtcgtcttctttct 86390
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>dbj|AK101262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032J01, full
           insert sequence
          Length = 2675

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 170 gcgtcgccgtcgtcttctttct 191
           ||||||||||||||||||||||
Sbjct: 535 gcgtcgccgtcgtcttctttct 556
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>dbj|AK058801.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A09, full
           insert sequence
          Length = 527

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 266 ccagctccgagtatccagtagaatttcaggttcttgta 303
           ||||| || |||||||||||||| | ||||||||||||
Sbjct: 347 ccagccccaagtatccagtagaaatgcaggttcttgta 310
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>ref|XM_470825.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1597

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 263  tggccagctccgagtatccagtagaatttcaggttcttgta 303
            ||||||||||| || ||||||||||| | |||||| |||||
Sbjct: 1338 tggccagctccaaggatccagtagaaatgcaggtttttgta 1298
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>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete
              sequence
          Length = 115079

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 263    tggccagctccgagtatccagtagaatttcaggttcttgta 303
              ||||||||||| || ||||||||||| | |||||| |||||
Sbjct: 101656 tggccagctccaaggatccagtagaaatgcaggtttttgta 101696
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>gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, complete sequence
          Length = 109233

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 61  atctctcttttctcatctttc 81
           |||||||||||||||||||||
Sbjct: 270 atctctcttttctcatctttc 290
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>gb|AC022149.3|AC022149 Homo sapiens chromosome 19 clone CTD-3093B17, complete sequence
          Length = 39383

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    atctctcttttctcatctttc 81
             |||||||||||||||||||||
Sbjct: 31014 atctctcttttctcatctttc 31034
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>dbj|AP002054.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T15D2
          Length = 87219

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 471   cttccactccaaatttgaggagctc 495
             ||||||||||||||||||| |||||
Sbjct: 12611 cttccactccaaatttgagtagctc 12587
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>dbj|AK103605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133H04, full
            insert sequence
          Length = 1600

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 263  tggccagctccgagtatccagtagaatttcaggttcttgta 303
            ||||||||||| || ||||||||||| | |||||| |||||
Sbjct: 1340 tggccagctccaaggatccagtagaaatgcaggtttttgta 1300
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>gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, complete sequence
          Length = 188997

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     tttatctctcttttctcatctttc 81
              ||||||||| ||||||||||||||
Sbjct: 146680 tttatctctattttctcatctttc 146703
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>gb|AY451394.1| Mus musculus acetyl-CoA carboxylase 2 (Acacb) mRNA, complete cds
          Length = 7461

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  tgagcttctggacccagtcc 418
            ||||||||||||||||||||
Sbjct: 3055 tgagcttctggacccagtcc 3036
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>gb|AY344985.1| Sporisorium occidentale internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 705

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 ttgtgttggtgtcaggctgc 164
           ||||||||||||||||||||
Sbjct: 141 ttgtgttggtgtcaggctgc 122
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>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence
          Length = 227388

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   tgagcttctggacccagtcc 418
             ||||||||||||||||||||
Sbjct: 84431 tgagcttctggacccagtcc 84412
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>gb|AC004514.1|HUAC004514 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-954B10, complete sequence
          Length = 118521

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    gttcttaaggccttcccact 398
              ||||||||||||||||||||
Sbjct: 102211 gttcttaaggccttcccact 102192
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>emb|AJ002369.1|AODPPIV Aspergillus oryzae dppIV gene
          Length = 4771

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 333 cttcacccgccttgcagtag 352
           ||||||||||||||||||||
Sbjct: 47  cttcacccgccttgcagtag 66
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>gb|AC011773.9| Homo sapiens chromosome 8, clone RP11-219B4, complete sequence
          Length = 160283

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    atctctcttttctcatcttt 80
             ||||||||||||||||||||
Sbjct: 62624 atctctcttttctcatcttt 62605
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>gb|AC119049.1| Homo sapiens chromosome 16 clone CTA-464C10, complete sequence
          Length = 118521

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    gttcttaaggccttcccact 398
              ||||||||||||||||||||
Sbjct: 102211 gttcttaaggccttcccact 102192
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 333     cttcacccgccttgcagtag 352
               ||||||||||||||||||||
Sbjct: 1589578 cttcacccgccttgcagtag 1589559
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>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
             sequence
          Length = 96801

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ttcatttatctctcttttct 73
             ||||||||||||||||||||
Sbjct: 24697 ttcatttatctctcttttct 24716
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>dbj|AK147463.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:M5C1047P08
            product:acetyl-Coenzyme A carboxylase beta, full insert
            sequence
          Length = 6681

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  tgagcttctggacccagtcc 418
            ||||||||||||||||||||
Sbjct: 1250 tgagcttctggacccagtcc 1231
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>gb|AC040159.4|AC040159 Homo sapiens chromosome 16 clone CTC-253B9, complete sequence
          Length = 118521

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    gttcttaaggccttcccact 398
              ||||||||||||||||||||
Sbjct: 102211 gttcttaaggccttcccact 102192
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>gb|AC009310.3| Homo sapiens BAC clone RP11-302A6 from 2, complete sequence
          Length = 89977

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atctctcttttctcatcttt 80
             ||||||||||||||||||||
Sbjct: 25262 atctctcttttctcatcttt 25281
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>gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, complete sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gttcttaaggccttcccact 398
              ||||||||||||||||||||
Sbjct: 119871 gttcttaaggccttcccact 119890
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>gb|AC012150.16|AC012150 Homo sapiens 12 BAC RP11-946L16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 227305

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     ttatctctcttttctcatct 78
              ||||||||||||||||||||
Sbjct: 108981 ttatctctcttttctcatct 109000
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>dbj|BS000050.1| Pan troglodytes chromosome 22 clone:RP43-038C12, map 22, complete
             sequences
          Length = 202014

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   tagaatttcaggttcttgta 303
             ||||||||||||||||||||
Sbjct: 31449 tagaatttcaggttcttgta 31468
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>gb|AY740043.1| Sporisorium andropogonis internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 730

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 ttgtgttggtgtcaggctgc 164
           ||||||||||||||||||||
Sbjct: 164 ttgtgttggtgtcaggctgc 145
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>gb|AY740042.1| Sporisorium andropogonis internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 594

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 ttgtgttggtgtcaggctgc 164
           ||||||||||||||||||||
Sbjct: 116 ttgtgttggtgtcaggctgc 97
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>ref|NM_133904.1| Mus musculus acetyl-Coenzyme A carboxylase beta (Acacb), mRNA
          Length = 7461

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  tgagcttctggacccagtcc 418
            ||||||||||||||||||||
Sbjct: 3055 tgagcttctggacccagtcc 3036


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,377,274
Number of Sequences: 3902068
Number of extensions: 4377274
Number of successful extensions: 80397
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 80153
Number of HSP's gapped (non-prelim): 245
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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