ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags13b05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M14, full insert sequence Length = 1960 Score = 513 bits (259), Expect = e-142 Identities = 448/511 (87%) Strand = Plus / Minus Query: 153 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 212 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 1776 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 1717 Query: 213 ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 272 |||| ||||||||||||||||| ||||||||||| ||||||||| || ||| ||||| | Sbjct: 1716 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 1657 Query: 273 gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatca 332 ||| || |||||||||||||| || || | ||||| || ||||||||||||||||||| Sbjct: 1656 gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagccttcttgatca 1597 Query: 333 ctggcttgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctc 392 |||||||| |||| || ||||||||||||||||||||||||| |||| ||||||||| | Sbjct: 1596 ctggcttgtactttccgtgcctcctctcaacatccatcaacgatgtcaatgcagttccac 1537 Query: 393 caacagtccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtct 452 |||| ||||||| ||||||||||||||| ||||| |||||||||| || |||||||||| Sbjct: 1536 caacggtccattcttccacaggagcagcgaggttgccaaccgacgtaatcagtcctgtct 1477 Query: 453 tgccaaactggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaa 512 | ||| | |||||||| || |||| ||| |||||||| |||||||||||| | ||||||| Sbjct: 1476 tcccacattggagaagtgccccagaaccgtagcctaacgcatagcaatagttagaatcaa 1417 Query: 513 aattggtagggaggccgcaccttccttcatatccaaagaagtgagactggcctctgaaat 572 || | ||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 1416 aaatagtaggaaggccacatcttccttcatatccaaagaagtgagattggcctctgaaat 1357 Query: 573 gtgcagagtacttccccgccgctcttctcttctccaattcagtttcaaccatggcaataa 632 |||| | |||||||||| | ||| ||||||||||||||||||| |||||||||||||||| Sbjct: 1356 gtgcggggtacttcccctcagcttttctcttctccaattcagtctcaaccatggcaataa 1297 Query: 633 gcattttctcagtttcaattttcgcaacctg 663 |||||||||| ||||||||||| |||||||| Sbjct: 1296 gcattttctctgtttcaatttttgcaacctg 1266
>gb|AY104192.1| Zea mays PCO077725 mRNA sequence Length = 1688 Score = 511 bits (258), Expect = e-142 Identities = 447/510 (87%) Strand = Plus / Minus Query: 154 tctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccagg 213 |||||||| ||| || ||||| |||| ||||||||||||||||||| | ||||||||||| Sbjct: 1335 tctctataactcagcaccgagttccagcatcaaggtgtggttcgagtcatcgcttccagg 1276 Query: 214 gccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccg 273 |||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||| Sbjct: 1275 gccgctgaactggatggggccagggctgatgtatctgttcttgatggcccactcatccct 1216 Query: 274 catcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcac 333 || ||| ||| | ||||| || || |||||||| || || |||||||||||||||||||| Sbjct: 1215 caacgatgcatatttcttgaaaggtgcagcatcgagttccaccatagccttcttgatcac 1156 Query: 334 tggcttgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctcc 393 ||||||||||||||| |||||||||||||||||||||| | |||| ||| ||||| || Sbjct: 1155 tggcttgaacttgccgtgcctcctctcaacatccatcagtgatgtcaatgctgttccacc 1096 Query: 394 aacagtccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 453 ||||||||||| ||| || ||||| || ||||| ||||||||||| |||||||||||||| Sbjct: 1095 aacagtccattcttctactggagccgcaaggttgccaaccgacgaaataagtcctgtctt 1036 Query: 454 gccaaactggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaa 513 ||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 1035 cccactttggagaagggcaccagcaccatagcctaatgcatagcaatagttagaatcaaa 976 Query: 514 attggtagggaggccgcaccttccttcatatccaaagaagtgagactggcctctgaaatg 573 ||| ||||| |||||||| |||||||| || |||||||| |||| || ||||||||||| Sbjct: 975 attagtaggaaggccgcatcttccttcgtacccaaagaaatgagcttgtcctctgaaatg 916 Query: 574 tgcagagtacttccccgccgctcttctcttctccaattcagtttcaaccatggcaataag 633 ||||||||| ||||| | ||| |||||||||||| ||||||||| |||||| |||||| Sbjct: 915 tgcagagtatctcccctcagcttttctcttctccagttcagtttccaccatgctaataag 856 Query: 634 cattttctcagtttcaattttcgcaacctg 663 ||||||||||||||||||||| |||||||| Sbjct: 855 cattttctcagtttcaatttttgcaacctg 826
>gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP) beta-subunit mRNA, complete cds Length = 1986 Score = 176 bits (89), Expect = 6e-41 Identities = 269/329 (81%) Strand = Plus / Minus Query: 227 atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 286 |||||||| ||| | ||||||||||| || | |||||||| |||| | | || ||||| Sbjct: 1676 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1617 Query: 287 ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 346 ||||| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 ttcttgaatggagcaccttcaagctcaaccatagccttcttgatcactggcttgaacttg 1557 Query: 347 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 406 ||||| |||||||| || |||||||||||||| ||||| ||||| || || ||| ||| | Sbjct: 1556 ccatgtctcctctctacgtccatcaacgcagtgagtgctgttccacctacggtcaattct 1497 Query: 407 tccacaggagcagccaggttaccaaccgacgagataagtcctgtcttgccaaactggaga 466 || ||||||||||||| ||||||||||| || || | |||||||| ||| || || Sbjct: 1496 tcaacaggagcagccaaattaccaaccgatgatatcaaccctgtcttcccactttgaagc 1437 Query: 467 agagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggtagggagg 526 || | || |||||||| || ||||| || || || | ||||||||||||| || | | Sbjct: 1436 agtgatcctgcaccataccccaatgcgtaacagtatgtagaatcaaaattggatggcaag 1377 Query: 527 ccgcaccttccttcatatccaaagaagtg 555 || |||||||||||||| ||||| ||||| Sbjct: 1376 ccacaccttccttcataaccaaaaaagtg 1348 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 605 tccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcgcaacctg 663 ||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 1298 tccaactcagtttcaaccatttgaataagcattttctcagtttcgattttggcaacctg 1240
>gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence Length = 1952 Score = 168 bits (85), Expect = 1e-38 Identities = 178/209 (85%) Strand = Plus / Minus Query: 227 atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 286 |||||||| ||| | ||||||||||| || | |||||||| |||| | | || ||||| Sbjct: 1715 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1656 Query: 287 ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 346 ||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1655 ttcttgaatggagcacctccaagctcaaccatagccttcttgatcactggcttgaacttg 1596 Query: 347 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 406 ||||| |||||||| || |||||||| ||||| ||||| ||||| || || ||||||| | Sbjct: 1595 ccatgtctcctctctacgtccatcaatgcagtgagtgctgttccacctaccgtccattct 1536 Query: 407 tccacaggagcagccaggttaccaaccga 435 || ||||||||||||| ||||||||||| Sbjct: 1535 tcaacaggagcagccaaattaccaaccga 1507 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 605 tccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcgcaacctg 663 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1337 tccaactcagtttcaaccatttgaataagcattttctcagtttcaattttcgcaacctg 1279 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 506 gaatcaaaattggtagggaggccgcaccttccttcatatccaaagaagtgagactg 561 ||||||||||||| || | ||| |||||||||||||| ||||| ||||| ||||| Sbjct: 1436 gaatcaaaattggatggcaagccacaccttccttcataaccaaaaaagtgggactg 1381
>ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G04040 mRNA, complete cds Length = 1947 Score = 165 bits (83), Expect = 2e-37 Identities = 227/275 (82%) Strand = Plus / Minus Query: 281 gcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttg 340 ||||| |||||||| || ||| | ||||| ||||||||||| |||||||| || |||||| Sbjct: 1634 gcaaatttcttaaacggtgcaccttcaagttcaaccatagctttcttgataacaggcttg 1575 Query: 341 aacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtc 400 || || ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||| Sbjct: 1574 aatttaccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtc 1515 Query: 401 cattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtcttgccaaac 460 || | ||| ||||||||||||| ||| |||||||| || || | ||| ||||| || | Sbjct: 1514 cactcttcaacaggagcagccaagtttccaaccgatgaaattaatccggtctttccgctc 1455 Query: 461 tggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggta 520 |||||||| | |||||||| || |||||||| ||||| || | | ||| ||||| ||| Sbjct: 1454 tggagaagtgatccagcaccgtaacctaatgcgtagcagtaagttgcatcgaaatttgta 1395 Query: 521 gggaggccgcaccttccttcatatccaaagaagtg 555 || | |||||| ||||||||||| ||||||||||| Sbjct: 1394 ggtaagccgcatcttccttcatacccaaagaagtg 1360
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 165 bits (83), Expect = 2e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 540 catatccaaagaagtgagactggcctctgaaatgtgcagagtacttccccgccgctcttc 599 |||| |||||||||||||| ||||||||||||||||| | |||||||||| | ||| ||| Sbjct: 7661108 catacccaaagaagtgagattggcctctgaaatgtgcggggtacttcccctcagcttttc 7661167 Query: 600 tcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcgcaa 659 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 7661168 tcttctccaattcagtctcaaccatggcaataagcattttctctgtttcaatttttgcaa 7661227 Query: 660 cct 662 ||| Sbjct: 7661228 cct 7661230 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 350 tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 409 ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||| Sbjct: 7660685 tgcctcctctcaacatccatcaacgatgtcaatgcagttccaccaacggtccattcttcc 7660744 Query: 410 acaggagcagccaggttaccaacc 433 ||||||||||| ||||| |||||| Sbjct: 7660745 acaggagcagcgaggttgccaacc 7660768 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 153 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 212 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 7660088 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 7660147 Query: 213 ggccgctgaactggatgggacc 234 |||| ||||||||||||||||| Sbjct: 7660148 ggccactgaactggatgggacc 7660169 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 443 agtcctgtcttgccaaactggagaagagcaccagcaccatagcctaatgcatagcaatag 502 ||||||||||| ||| | |||||||| || |||| ||| |||||||| |||||||||||| Sbjct: 7660940 agtcctgtcttcccacattggagaagtgccccagaaccgtagcctaacgcatagcaatag 7660999 Query: 503 ctggaatcaaaattggtagggaggccgcaccttccttcatatc 545 | ||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 7661000 ttagaatcaaaaatagtaggaaggccacatcttccttcatatc 7661042 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaactt 345 ||||| || ||||||||||||||||||||||||||| |||| Sbjct: 7660420 tcaagttccaccatagccttcttgatcactggcttgtactt 7660460 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 236 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 294 ||||||||||| ||||||||| || ||| ||||| |||| || |||||||||||||| Sbjct: 7660262 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 7660320
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 165 bits (83), Expect = 2e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 540 catatccaaagaagtgagactggcctctgaaatgtgcagagtacttccccgccgctcttc 599 |||| |||||||||||||| ||||||||||||||||| | |||||||||| | ||| ||| Sbjct: 84363 catacccaaagaagtgagattggcctctgaaatgtgcggggtacttcccctcagcttttc 84422 Query: 600 tcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcgcaa 659 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 84423 tcttctccaattcagtctcaaccatggcaataagcattttctctgtttcaatttttgcaa 84482 Query: 660 cct 662 ||| Sbjct: 84483 cct 84485 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 350 tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 409 ||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||| Sbjct: 83940 tgcctcctctcaacatccatcaacgatgtcaatgcagttccaccaacggtccattcttcc 83999 Query: 410 acaggagcagccaggttaccaacc 433 ||||||||||| ||||| |||||| Sbjct: 84000 acaggagcagcgaggttgccaacc 84023 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 153 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 212 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 83343 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 83402 Query: 213 ggccgctgaactggatgggacc 234 |||| ||||||||||||||||| Sbjct: 83403 ggccactgaactggatgggacc 83424 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 443 agtcctgtcttgccaaactggagaagagcaccagcaccatagcctaatgcatagcaatag 502 ||||||||||| ||| | |||||||| || |||| ||| |||||||| |||||||||||| Sbjct: 84195 agtcctgtcttcccacattggagaagtgccccagaaccgtagcctaacgcatagcaatag 84254 Query: 503 ctggaatcaaaattggtagggaggccgcaccttccttcatatc 545 | ||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 84255 ttagaatcaaaaatagtaggaaggccacatcttccttcatatc 84297 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaactt 345 ||||| || ||||||||||||||||||||||||||| |||| Sbjct: 83675 tcaagttccaccatagccttcttgatcactggcttgtactt 83715 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 236 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 294 ||||||||||| ||||||||| || ||| ||||| |||| || |||||||||||||| Sbjct: 83517 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 83575
>ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G12000 mRNA, complete cds Length = 2072 Score = 157 bits (79), Expect = 6e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 219 tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 278 |||| ||||| ||||| |||||||||||||||||||| | |||||||| || |||| | Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691 Query: 279 aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 338 | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| |||| Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631 Query: 339 tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 398 ||||||| || || |||||||| ||||||||||| || || || ||||| || || |||| Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1571 Query: 399 tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 453 |||||| ||||||||||||||||| ||| |||||||| || || ||||| ||||| Sbjct: 1570 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1516 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 597 ttctcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcg 656 |||| ||||||||||||||||||||||| ||||||||| |||||||| ||||| || | Sbjct: 1372 ttcttttctccaattcagtttcaaccatttgaataagcatcttctcagtctcaatcttag 1313 Query: 657 caacctg 663 ||||||| Sbjct: 1312 caacctg 1306
>gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dependent phosphofuctokinase beta subunit (At1g12000) mRNA, complete cds Length = 1733 Score = 157 bits (79), Expect = 6e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 219 tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 278 |||| ||||| ||||| |||||||||||||||||||| | |||||||| || |||| | Sbjct: 1642 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1583 Query: 279 aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 338 | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| |||| Sbjct: 1582 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1523 Query: 339 tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 398 ||||||| || || |||||||| ||||||||||| || || || ||||| || || |||| Sbjct: 1522 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1463 Query: 399 tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 453 |||||| ||||||||||||||||| ||| |||||||| || || ||||| ||||| Sbjct: 1462 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1408 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 597 ttctcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcg 656 |||| ||||||||||||||||||||||| ||||||||| |||||||| ||||| || | Sbjct: 1264 ttcttttctccaattcagtttcaaccatttgaataagcatcttctcagtctcaatcttag 1205 Query: 657 caacctg 663 ||||||| Sbjct: 1204 caacctg 1198
>gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dependent phosphofuctokinase beta subunit (At1g12000; F12F1.13) mRNA, complete cds Length = 1965 Score = 157 bits (79), Expect = 6e-35 Identities = 196/235 (83%) Strand = Plus / Minus Query: 219 tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 278 |||| ||||| ||||| |||||||||||||||||||| | |||||||| || |||| | Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691 Query: 279 aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 338 | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| |||| Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631 Query: 339 tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 398 ||||||| || || |||||||| ||||||||||| || || || ||||| || || |||| Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1571 Query: 399 tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 453 |||||| ||||||||||||||||| ||| |||||||| || || ||||| ||||| Sbjct: 1570 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1516 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 597 ttctcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcg 656 |||| ||||||||||||||||||||||| ||||||||| |||||||| ||||| || | Sbjct: 1372 ttcttttctccaattcagtttcaaccatttgaataagcatcttctcagtctcaatcttag 1313 Query: 657 caacctg 663 ||||||| Sbjct: 1312 caacctg 1306
>gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent phosphofructokinase beta subunit (PPi-PFKb) mRNA, complete cds Length = 2034 Score = 153 bits (77), Expect = 9e-34 Identities = 164/193 (84%) Strand = Plus / Minus Query: 230 ggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttc 289 ||||| || |||||||| || || |||| ||||| ||||| ||||| || |||||||| Sbjct: 1681 ggaccaggactgatgtagcgattattgagagcccactcatctcgcatggatacaaacttc 1622 Query: 290 ttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttgcca 349 || ||||| | | ||||||| || ||||| |||||||| ||||| ||||||||||||||| Sbjct: 1621 ttgaatggtgtaccatcaagttccaccatcgccttcttaatcacaggcttgaacttgcca 1562 Query: 350 tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 409 || |||||||| |||||||| || ||||||||||||||||| | ||||||||||| |||| Sbjct: 1561 tgtctcctctctacatccattaatgcagtcagtgcagttccactaacagtccattcttcc 1502 Query: 410 acaggagcagcca 422 || |||||||||| Sbjct: 1501 actggagcagcca 1489 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 634 cattttctcagtttcaattttcgcaacctg 663 ||||||||| ||||||||||| |||||||| Sbjct: 1277 cattttctctgtttcaattttggcaacctg 1248
>dbj|AK060464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C08, full insert sequence Length = 453 Score = 143 bits (72), Expect = 8e-31 Identities = 147/172 (85%) Strand = Plus / Minus Query: 153 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 212 |||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 172 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 113 Query: 213 ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 272 |||| ||||||||||||||||| ||||||||||| ||||||||| || ||| ||||| | Sbjct: 112 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 53 Query: 273 gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagcctt 324 ||| || |||||||||||||| || || | ||||| || ||||||||||| Sbjct: 52 gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagcctt 1
>dbj|D17765.1|RICAK9901 Oryza sativa AK99 mRNA for pyrophosphate-fructose 6-phosphate 1-phosphotransferase, partial cds Length = 178 Score = 113 bits (57), Expect = 8e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 583 cttccccgccgctcttctcttctccaattcagtttcaaccatggcaataagcattttctc 642 ||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 171 cttcccctcagcttttctcttctccaattcagtctcaaccatggcaataagcattttctc 112 Query: 643 agtttcaattttcgcaacctg 663 ||||||||||| |||||||| Sbjct: 111 tgtttcaatttttgcaacctg 91
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11 Length = 198022 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 347 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 406 ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||| | | Sbjct: 57126 ccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtccactct 57067 Query: 407 tccacaggagcagccaggttaccaacc 433 || ||||||||||||| ||| |||||| Sbjct: 57066 tcaacaggagcagccaagtttccaacc 57040 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaa 342 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 57247 tcaagttcaaccatagctttcttgataacaggcttgaa 57210 Score = 40.1 bits (20), Expect = 9.1 Identities = 68/84 (80%) Strand = Plus / Minus Query: 460 ctggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggt 519 ||||||||| | |||||||| || |||||||| ||||| || | | ||| ||||| || Sbjct: 56924 ctggagaagtgatccagcaccgtaacctaatgcgtagcagtaagttgcatcgaaatttgt 56865 Query: 520 agggaggccgcaccttccttcata 543 ||| | |||||| ||||||||||| Sbjct: 56864 aggtaagccgcatcttccttcata 56841
>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 Length = 88848 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 347 ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 406 ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||| | | Sbjct: 60309 ccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtccactct 60368 Query: 407 tccacaggagcagccaggttaccaacc 433 || ||||||||||||| ||| |||||| Sbjct: 60369 tcaacaggagcagccaagtttccaacc 60395 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaa 342 ||||| ||||||||||| |||||||| || |||||||| Sbjct: 60188 tcaagttcaaccatagctttcttgataacaggcttgaa 60225 Score = 40.1 bits (20), Expect = 9.1 Identities = 68/84 (80%) Strand = Plus / Plus Query: 460 ctggagaagagcaccagcaccatagcctaatgcatagcaatagctggaatcaaaattggt 519 ||||||||| | |||||||| || |||||||| ||||| || | | ||| ||||| || Sbjct: 60511 ctggagaagtgatccagcaccgtaacctaatgcgtagcagtaagttgcatcgaaatttgt 60570 Query: 520 agggaggccgcaccttccttcata 543 ||| | |||||| ||||||||||| Sbjct: 60571 aggtaagccgcatcttccttcata 60594
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 353 ctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttccaca 412 |||||||| ||||||||||| || || || ||||| || || |||||||||| ||||||| Sbjct: 64016 ctcctctcgacatccatcaaggctgtgagagcagtcccacctacagtccattcttccaca 63957 Query: 413 ggagcagccaggttaccaacc 433 |||||||||| ||| |||||| Sbjct: 63956 ggagcagccaagttcccaacc 63936 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 597 ttctcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcg 656 |||| ||||||||||||||||||||||| ||||||||| |||||||| ||||| || | Sbjct: 63550 ttcttttctccaattcagtttcaaccatttgaataagcatcttctcagtctcaatcttag 63491 Query: 657 caacct 662 |||||| Sbjct: 63490 caacct 63485 Score = 44.1 bits (22), Expect = 0.58 Identities = 52/62 (83%) Strand = Plus / Minus Query: 236 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaat 295 |||||||||||||||||||| | |||||||| || |||| || || || ||||||||| Sbjct: 64301 gggctgatgtatcggttcttcaatgcccattcttcacgcagtgatgcgaatttcttaaat 64242 Query: 296 gg 297 || Sbjct: 64241 gg 64240 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaactt 345 ||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 64149 tcaagttccaccattgctttcttgatcacaggcttgaactt 64109
>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence Length = 120811 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 597 ttctcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcg 656 |||||||| |||| |||||||||||||| | |||||||||||||| ||||| ||||| | Sbjct: 87148 ttctcttccccaactcagtttcaaccatttcgataagcattttctctgtttctattttag 87089 Query: 657 caacctg 663 ||||||| Sbjct: 87088 caacctg 87082 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaa 342 |||||||| ||||| |||||||||||||| |||||||| Sbjct: 88087 tcaagctccaccattgccttcttgatcacaggcttgaa 88050 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 259 ggcccattcatcccgcatcgaggcaaactt 288 ||||||||||||||||| ||||||||||| Sbjct: 88243 ggcccattcatcccgcaatgaggcaaactt 88214
>emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent phosphofructokinase beta subunit Length = 5280 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 305 tcaagctcaaccatagccttcttgatcactggcttgaactt 345 |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 4606 tcaagctccaccatcgccttcttgatcacaggcttgaactt 4566 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 599 ctcttctccaattcagtttcaaccatggcaataagcattttctcagtttcaattttcgca 658 |||||||| || |||||||||||||| ||||||||||||||| || || ||||| ||| Sbjct: 3588 ctcttctctaactcagtttcaaccatttgaataagcattttctctgtctctattttggca 3529 Query: 659 acct 662 |||| Sbjct: 3528 acct 3525 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 ctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttccaca 412 ||||| || |||||||| || | |||||||||||| || ||||| ||||||| | ||||| Sbjct: 4243 ctcctttctacatccattaaagaagtcagtgcagtgccaccaactgtccattctgccaca 4184 Query: 413 ggagca 418 |||||| Sbjct: 4183 ggagca 4178
>gb|DQ239686.1| Brassica napus pyrophosphate-dependent phosphofructokinase-like gene, partial sequence Length = 428 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 236 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 294 |||||||||||||||||||| | ||||||||| || |||| || ||||| |||||||| Sbjct: 238 gggctgatgtatcggttcttcaaggcccattcctcgcgcagggatgcaaatttcttaaa 296
>ref|XM_648081.1| Entamoeba histolytica HM-1:IMSS pyrophosphate-dependent phosphofructokinase (91.t00031) partial mRNA Length = 1641 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 506 gaatcaaaattggtagggaggccgcaccttccttcatatccaaagaagtga 556 |||||||||||| | |||| | | || |||||||||||||||||||||||| Sbjct: 1295 gaatcaaaattgcttgggaaggcacatcttccttcatatccaaagaagtga 1245
>gb|AF013986.1|AF013986 Entamoeba histolytica PPi-dependent phosphofructokinase (ehpfk) mRNA, complete cds Length = 1696 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 506 gaatcaaaattggtagggaggccgcaccttccttcatatccaaagaagtga 556 |||||||||||| | |||| | | || |||||||||||||||||||||||| Sbjct: 1312 gaatcaaaattgcttgggaaggcacatcttccttcatatccaaagaagtga 1262
>ref|XM_662709.1| Cryptosporidium hominis TU502 pyrophosphate-dependent phosphofructokinase (Chro.30172) partial mRNA Length = 3987 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 528 cgcaccttccttcatatccaaagaagtgag 557 |||| |||||||||||||||||| |||||| Sbjct: 1339 cgcatcttccttcatatccaaagtagtgag 1310
>ref|XM_626715.1| Cryptosporidium parvum Iowa II pyrophosphate-dependent 6-phosphofructokinase (cgd3_1400), partial mRNA Length = 3984 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 528 cgcaccttccttcatatccaaagaagtgag 557 |||| |||||||||||||||||| |||||| Sbjct: 1339 cgcatcttccttcatatccaaagtagtgag 1310
>ref|XM_221882.3| PREDICTED: Rattus norvegicus guanylate binding protein 1, interferon-inducible, 67kDa (predicted) (Gbp1_predicted), mRNA Length = 2343 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 aggaacaagaagaaaatttcaa 132 |||||||||||||||||||||| Sbjct: 2237 aggaacaagaagaaaatttcaa 2258
>gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete sequence Length = 66066 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 acaggagcagccaggttacca 430 ||||||||||||||||||||| Sbjct: 32087 acaggagcagccaggttacca 32107
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence Length = 111678 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 acaggagcagccaggttacca 430 ||||||||||||||||||||| Sbjct: 94700 acaggagcagccaggttacca 94720
>gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete sequence Length = 68256 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 acaggagcagccaggttacca 430 ||||||||||||||||||||| Sbjct: 8617 acaggagcagccaggttacca 8637
>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete sequence Length = 180545 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 catcgaggcaaacttcttaaa 294 ||||||||||||||||||||| Sbjct: 77544 catcgaggcaaacttcttaaa 77524
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 aaacttcttaaatggcgcagc 303 ||||||||||||||||||||| Sbjct: 101378 aaacttcttaaatggcgcagc 101358
>gb|AC097465.2| Homo sapiens BAC clone RP11-24I21 from 4, complete sequence Length = 172557 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 622 catggcaataagcattttctc 642 ||||||||||||||||||||| Sbjct: 139077 catggcaataagcattttctc 139097
>gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, complete sequence Length = 188353 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 atgcctcctctcaacatccat 369 ||||||||||||||||||||| Sbjct: 140490 atgcctcctctcaacatccat 140510
>dbj|AP005626.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB51H10, complete sequence Length = 74057 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 ggcctctgaaatgtgcagagt 581 ||||||||||||||||||||| Sbjct: 50212 ggcctctgaaatgtgcagagt 50232
>gb|DQ131890.1| Nicotiana tabacum cytochrome P450 monooxygenase 121A_A02 pseudogene mRNA, complete sequence Length = 1547 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gcaccttccttcatatccaa 548 |||||||||||||||||||| Sbjct: 1474 gcaccttccttcatatccaa 1455
>gb|DQ131887.1| Nicotiana tabacum cytochrome P450 monooxygenase CYP82E2 mRNA, complete cds Length = 1757 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gcaccttccttcatatccaa 548 |||||||||||||||||||| Sbjct: 1481 gcaccttccttcatatccaa 1462
>gb|DQ131885.1| Nicotiana tabacum cytochrome P450 monooxygenase CYP82E4v2 mRNA, complete cds Length = 1754 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gcaccttccttcatatccaa 548 |||||||||||||||||||| Sbjct: 1481 gcaccttccttcatatccaa 1462
>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence Length = 197242 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tctcaaaactgcaaggaaca 117 |||||||||||||||||||| Sbjct: 10339 tctcaaaactgcaaggaaca 10320
>gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, complete sequence Length = 195433 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acatcttattaaacattcca 53 |||||||||||||||||||| Sbjct: 31371 acatcttattaaacattcca 31390
>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2) genes, complete cds Length = 328473 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 agcatcaagctcaaccatagcctt 324 ||||| |||||||||||||||||| Sbjct: 67034 agcatgaagctcaaccatagcctt 67057 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 agcatcaagctcaaccatagcctt 324 ||||| |||||||||||||||||| Sbjct: 47113 agcatgaagctcaaccatagcctt 47090
>gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete sequence Length = 111561 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 81257 cttaacccactccaactcaa 81238
>gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, complete sequence Length = 136964 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 acatcttattaaacattcca 53 |||||||||||||||||||| Sbjct: 40502 acatcttattaaacattcca 40521
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 1299 cttaacccactccaactcaa 1318
>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1 of 3 of the complete sequence Length = 106598 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cccactccaactcaacatct 39 |||||||||||||||||||| Sbjct: 97173 cccactccaactcaacatct 97154
>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence Length = 129102 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 atgcctcctctcaacatcca 368 |||||||||||||||||||| Sbjct: 64505 atgcctcctctcaacatcca 64524
>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence Length = 143015 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 57314 cttaacccactccaactcaa 57295
>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence Length = 139116 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 14777 cttaacccactccaactcaa 14758
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence Length = 110272 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 22529 cttaacccactccaactcaa 22548
>emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on chromosome 13 Contains the 5' end of the ITGBL1 gene for integrin, beta-like 1 (with EGF-like repeat domains), complete sequence Length = 149143 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cccactccaactcaacatct 39 |||||||||||||||||||| Sbjct: 13544 cccactccaactcaacatct 13525
>ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA (LOC587342), partial mRNA Length = 1014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caaggaacaagaagaaaatt 128 |||||||||||||||||||| Sbjct: 607 caaggaacaagaagaaaatt 588
>emb|BX548005.11| Zebrafish DNA sequence from clone DKEY-105A17 in linkage group 6, complete sequence Length = 218236 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 453 tgccaaactggagaagagcaccagcacc 480 |||||||||||||||| |||||| |||| Sbjct: 44660 tgccaaactggagaagggcaccatcacc 44633
>gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167137 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccactccaactcaacatctt 40 |||||||||||||||||||| Sbjct: 166676 ccactccaactcaacatctt 166657
>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence Length = 115074 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 1984 cttaacccactccaactcaa 1965
>gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete sequence Length = 111786 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 45945 cttaacccactccaactcaa 45964
>gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete sequence Length = 125457 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 73214 cttaacccactccaactcaa 73233
>gb|AC104113.3| Homo sapiens chromosome 5 clone RP11-231G3, complete sequence Length = 105743 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 635 attttctcagtttcaatttt 654 |||||||||||||||||||| Sbjct: 89277 attttctcagtttcaatttt 89258
>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence Length = 107160 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttaacccactccaactcaa 34 |||||||||||||||||||| Sbjct: 75922 cttaacccactccaactcaa 75903
>gb|AC117414.3| Homo sapiens 3 BAC RP11-48F14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143721 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccactccaactcaacatctt 40 |||||||||||||||||||| Sbjct: 1544 ccactccaactcaacatctt 1525
>gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, complete sequence Length = 179884 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ctcaaccatagccttcttga 329 |||||||||||||||||||| Sbjct: 167232 ctcaaccatagccttcttga 167213
>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence Length = 188389 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ctcaaccatagccttcttga 329 |||||||||||||||||||| Sbjct: 29573 ctcaaccatagccttcttga 29554
>gb|AC023842.5|AC023842 Homo sapiens chromosome 8, clone RP11-374M4, complete sequence Length = 187351 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 597 ttctcttctccaattcagtttcaa 620 ||||||||||||||| |||||||| Sbjct: 103552 ttctcttctccaatttagtttcaa 103575
>gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, complete sequence Length = 166763 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ctgcaaggaacaagaagaaaattt 129 ||||||| |||||||||||||||| Sbjct: 52739 ctgcaagaaacaagaagaaaattt 52716
>gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, complete sequence Length = 160835 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 ctgcaaggaacaagaagaaaattt 129 ||||||| |||||||||||||||| Sbjct: 9718 ctgcaagaaacaagaagaaaattt 9741
>ref|XM_311551.2| Anopheles gambiae str. PEST ENSANGP00000010229 (ENSANGG00000007740), partial mRNA Length = 1257 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cttcttgatcactggcttga 341 |||||||||||||||||||| Sbjct: 1155 cttcttgatcactggcttga 1136
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tctcaaaactgcaaggaaca 117 |||||||||||||||||||| Sbjct: 172201 tctcaaaactgcaaggaaca 172182
>emb|BX005201.7| Zebrafish DNA sequence from clone CH211-129C21 in linkage group 22, complete sequence Length = 184499 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 633 gcattttctcagtttcaatt 652 |||||||||||||||||||| Sbjct: 158853 gcattttctcagtttcaatt 158834
>dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-285B2, complete sequence Length = 167054 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ctgcaaggaacaagaagaaaattt 129 ||||||| |||||||||||||||| Sbjct: 97123 ctgcaagaaacaagaagaaaattt 97100
>gb|AC000112.1|HSAC000112 Human PAC clone DJ149P21, complete sequence Length = 111118 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 597 ttctcttctccaattcagtttcaa 620 ||||||||||||||| |||||||| Sbjct: 35139 ttctcttctccaatttagtttcaa 35162
>dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 9/11 Length = 100000 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ctgcaaggaacaagaagaaaattt 129 ||||||| |||||||||||||||| Sbjct: 75474 ctgcaagaaacaagaagaaaattt 75451 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,196,140 Number of Sequences: 3902068 Number of extensions: 6196140 Number of successful extensions: 135002 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134829 Number of HSP's gapped (non-prelim): 172 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
