ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12m04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 494 tcagattgatcttcatcatcctcttcctctgcttcatcctcatcactatcaatctc 549 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| Sbjct: 1154 tcagattgatcttcatcctcctcttcctctgtttcatcttcatcactatcaatctc 1099
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 494 tcagattgatcttcatcatcctcttcctctgcttcatcctcatcactatcaatctc 549 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| Sbjct: 36711983 tcagattgatcttcatcctcctcttcctctgtttcatcttcatcactatcaatctc 36712038
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 494 tcagattgatcttcatcatcctcttcctctgcttcatcctcatcactatcaatctc 549 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| Sbjct: 38298 tcagattgatcttcatcctcctcttcctctgtttcatcttcatcactatcaatctc 38353
>dbj|AK100453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091D06, full insert sequence Length = 1714 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 494 tcagattgatcttcatcatcctcttcctctgcttcatcctcatcactatcaatctc 549 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| Sbjct: 1240 tcagattgatcttcatcctcctcttcctctgtttcatcttcatcactatcaatctc 1185
>dbj|AK069637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026J02, full insert sequence Length = 1739 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 494 tcagattgatcttcatcatcctcttcctctgcttcatcctcatcactatcaatctc 549 ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| Sbjct: 1291 tcagattgatcttcatcctcctcttcctctgtttcatcttcatcactatcaatctc 1236
>ref|XM_224434.3| PREDICTED: Rattus norvegicus kelch-like 1 (Drosophila) (predicted) (Klhl1_predicted), mRNA Length = 2311 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctc 534 ||||||||||| ||||||||||||||||| Sbjct: 296 tcatcatcctcgtcctctgcttcatcctc 324
>ref|XM_575617.1| PREDICTED: Rattus norvegicus similar to leiomodin 3 (fetal) (LOC500267), mRNA Length = 1537 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||||||||||||| ||| |||||||||| Sbjct: 484 atcttcatcatcctcttcatcttcttcatcctc 452
>gb|BT018216.1| Zea mays clone EL01N0561B04.c mRNA sequence Length = 713 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||||||||| |||| |||||||| Sbjct: 576 tcatcatcctcttcctcttcttcctcctcatc 545
>gb|AC111109.6| Mus musculus chromosome 1, clone RP23-199D23, complete sequence Length = 208792 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||||||||| |||| |||||||| Sbjct: 19415 tcatcatcctcttcctcttcttcttcctcatc 19446
>gb|AC124230.6| Mus musculus chromosome 1, clone RP23-474K11, complete sequence Length = 202996 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||||||||| |||| |||||||| Sbjct: 191400 tcatcatcctcttcctcttcttcttcctcatc 191431
>ref|XM_683284.1| PREDICTED: Danio rerio similar to TGF-beta induced apotosis protein 2 (LOC559894), mRNA Length = 1602 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||||||||| ||| ||||||| ||||| Sbjct: 954 atcttcatcatcctcttcatcttcttcatcttcatc 919
>ref|XM_688693.1| PREDICTED: Danio rerio similar to Tripartite motif protein 25 (Zinc finger protein 147) (Estrogen responsive finger protein) (Efp) (RING finger protein 147) (LOC565414), mRNA Length = 1836 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 ||||||||||||||||| ||||||||||||| Sbjct: 1226 tcatcatcctcttcctcgtcttcatcctcatc 1195 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctc 534 ||||||||||||||||| |||||||||| Sbjct: 1307 tcatcatcctcttcctcgtcttcatcctc 1279
>ref|NM_120652.3| Arabidopsis thaliana ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase AT5G05700 (ATE1) mRNA, complete cds Length = 2239 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 1706 tcatcatcctcatcctcatcttcatcctcatcact 1672
>gb|AY359004.1| Homo sapiens clone DNA56433 DJ971N18.2 (UNQ475) mRNA, complete cds Length = 2368 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 969 tcttcctctgcttcatcctcatc 947
>emb|AL021396.8|HS971N18 Human DNA sequence from clone RP5-971N18 on chromosome 20p12 Contains the PHKBP1 pseudogene (phosphorylase kinase, beta pseudogene 1), two novel genes and a CpG island, complete sequence Length = 125729 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 8767 tcttcctctgcttcatcctcatc 8789
>emb|CR859312.1| Pongo pygmaeus mRNA; cDNA DKFZp469P086 (from clone DKFZp469P086) Length = 7579 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatca 538 |||||||||||| |||||||||||||| Sbjct: 813 tcctcttcctcttcttcatcctcatca 787
>emb|AJ851787.1| Gallus gallus mRNA for hypothetical protein, clone 32g20 Length = 4976 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatca 538 |||||||||||| |||||||||||||| Sbjct: 961 tcctcttcctcttcttcatcctcatca 935
>ref|NM_001012862.1| Gallus gallus Jumonji, AT rich interactive domain 2 (JARID2), mRNA Length = 4976 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatca 538 |||||||||||| |||||||||||||| Sbjct: 961 tcctcttcctcttcttcatcctcatca 935
>emb|CR622965.1| full-length cDNA clone CS0DI004YG20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2000 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 968 tcttcctctgcttcatcctcatc 946
>emb|CR609977.1| full-length cDNA clone CS0DD007YL08 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 2002 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 966 tcttcctctgcttcatcctcatc 944
>dbj|AK074838.1| Homo sapiens cDNA FLJ90357 fis, clone NT2RP2003593, moderately similar to Thioredoxin-like protein KIAA1162 precursor Length = 2033 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 984 tcttcctctgcttcatcctcatc 962
>dbj|AK075404.1| Homo sapiens cDNA PSEC0095 fis, clone NT2RP2001768, moderately similar to Thioredoxin-like protein KIAA1162 precursor Length = 2080 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 1031 tcttcctctgcttcatcctcatc 1009
>emb|CR598899.1| full-length cDNA clone CS0DB006YG19 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1877 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 848 tcttcctctgcttcatcctcatc 826
>dbj|AK220906.1| Arabidopsis thaliana mRNA for arginine-tRNA-protein transferase 1 homolog, complete cds, clone: RAFL22-46-M10 Length = 2133 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 1663 tcatcatcctcatcctcatcttcatcctcatcact 1629
>emb|BX829902.1|CNS0A18W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZB06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2110 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 1704 tcatcatcctcatcctcatcttcatcctcatcact 1670
>emb|BX831037.1|CNS09YWF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2105 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 1709 tcatcatcctcatcctcatcttcatcctcatcact 1675
>ref|NM_021156.2| Homo sapiens thioredoxin domain containing 13 (TXNDC13), mRNA Length = 2368 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 969 tcttcctctgcttcatcctcatc 947
>dbj|AK176459.1| Arabidopsis thaliana mRNA for arginine-tRNA-protein transferase 1 homolog, complete cds, clone: RAFL24-23-N17 Length = 2172 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 1732 tcatcatcctcatcctcatcttcatcctcatcact 1698
>dbj|AK175362.1| Arabidopsis thaliana mRNA for arginine-tRNA-protein transferase 1 homolog, complete cds, clone: RAFL21-79-O11 Length = 2197 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 1713 tcatcatcctcatcctcatcttcatcctcatcact 1679
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3 Length = 87835 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatcact 540 ||||||||||| ||||| |||||||||||||||| Sbjct: 34053 tcatcatcctcatcctcatcttcatcctcatcact 34087
>emb|AL118494.1|HS971N182 Novel human gene mapping to chomosome 20 Length = 2059 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 577 tcttcctctgcttcatcctcatc 555
>gb|BC044777.1| Homo sapiens thioredoxin domain containing 13, mRNA (cDNA clone IMAGE:4827173) Length = 6191 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 1052 tcttcctctgcttcatcctcatc 1030
>gb|BC021964.2| Homo sapiens cDNA clone IMAGE:2959591, containing frame-shift errors Length = 2409 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 908 tcttcctctgcttcatcctcatc 886
>gb|BC033787.1| Homo sapiens thioredoxin domain containing 13, mRNA (cDNA clone MGC:45002 IMAGE:5165952), complete cds Length = 1190 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 863 tcttcctctgcttcatcctcatc 841
>dbj|AB032988.1| Homo sapiens mRNA for KIAA1162 protein, partial cds Length = 5224 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 515 tcttcctctgcttcatcctcatc 537 ||||||||||||||||||||||| Sbjct: 135 tcttcctctgcttcatcctcatc 113
>gb|BC101510.1| Homo sapiens transmembrane emp24 protein transport domain containing 8, mRNA (cDNA clone MGC:126559 IMAGE:8069016), complete cds Length = 1056 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 802 tcctcttcctcttcttcatcctcatc 777
>ref|NM_213601.1| Homo sapiens transmembrane emp24 protein transport domain containing 8 (TMED8), mRNA Length = 978 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 746 tcctcttcctcttcttcatcctcatc 721
>ref|NM_012127.2| Homo sapiens CDKN1A interacting zinc finger protein 1 (CIZ1), mRNA Length = 3032 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2455 tcatcatcctcttcctcttcttcatc 2430
>gb|AY598329.1| Homo sapiens L10 mRNA, complete cds Length = 978 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 746 tcctcttcctcttcttcatcctcatc 721
>ref|XM_615257.2| PREDICTED: Bos taurus similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A) (LOC541246), partial mRNA Length = 1959 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctg 524 |||||||||||||||||||||| Sbjct: 674 tcttcatcatcctcttcctctg 653
>ref|XM_878657.1| PREDICTED: Bos taurus similar to MORC family CW-type zinc finger 2 (Zinc finger CW-type coiled-coil domain protein 1), transcript variant 5 (LOC504634), mRNA Length = 5228 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 513 cctcttcctctgcttcatcctcatca 538 |||||||||||||||| ||||||||| Sbjct: 2094 cctcttcctctgcttcttcctcatca 2069
>ref|XM_878627.1| PREDICTED: Bos taurus similar to MORC family CW-type zinc finger 2 (Zinc finger CW-type coiled-coil domain protein 1), transcript variant 4 (LOC504634), mRNA Length = 5249 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 513 cctcttcctctgcttcatcctcatca 538 |||||||||||||||| ||||||||| Sbjct: 2022 cctcttcctctgcttcttcctcatca 1997
>ref|XM_878598.1| PREDICTED: Bos taurus similar to MORC family CW-type zinc finger 2 (Zinc finger CW-type coiled-coil domain protein 1), transcript variant 3 (LOC504634), mRNA Length = 4926 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 513 cctcttcctctgcttcatcctcatca 538 |||||||||||||||| ||||||||| Sbjct: 1768 cctcttcctctgcttcttcctcatca 1743
>ref|XM_580785.2| PREDICTED: Bos taurus similar to MORC family CW-type zinc finger 2 (Zinc finger CW-type coiled-coil domain protein 1), transcript variant 1 (LOC504634), mRNA Length = 5282 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 513 cctcttcctctgcttcatcctcatca 538 |||||||||||||||| ||||||||| Sbjct: 2094 cctcttcctctgcttcttcctcatca 2069
>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence Length = 214318 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttc 528 ||||||||||||||||||||| |||| Sbjct: 155536 tcttcatcatcctcttcctcttcttc 155561
>ref|XM_803441.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505163.30) partial mRNA Length = 2982 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttcatcctcatc 537 ||||||| |||||||| ||| ||||||||||||| Sbjct: 505 cttcatcgtcctcttcgtcttcttcatcctcatc 472
>ref|XM_803600.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503599.40) partial mRNA Length = 2991 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttcatcctcatc 537 ||||||| |||||||| ||| ||||||||||||| Sbjct: 508 cttcatcgtcctcttcgtcttcttcatcctcatc 475
>gb|AC127332.3| Mus musculus BAC clone RP23-136I1 from 5, complete sequence Length = 230629 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttcatcctcatc 537 ||||||||||||| || ||||| ||||||||||| Sbjct: 16627 cttcatcatcctcatcatctgcatcatcctcatc 16594
>gb|BC021163.2| Homo sapiens CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:16162 IMAGE:3633796), complete cds Length = 2783 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2154 tcatcatcctcttcctcttcttcatc 2129
>gb|BC004119.2| Homo sapiens CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:1118 IMAGE:3507940), complete cds Length = 2702 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2072 tcatcatcctcttcctcttcttcatc 2047
>gb|AF234161.1| Homo sapiens nuclear protein NP94b (NP94) mRNA, complete cds, alternatively spliced Length = 2508 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2018 tcatcatcctcttcctcttcttcatc 1993
>gb|AF159025.1| Homo sapiens nuclear protein NP94 mRNA, complete cds Length = 2821 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2247 tcatcatcctcttcctcttcttcatc 2222
>gb|BC012773.1| Homo sapiens cDNA clone IMAGE:3837950, **** WARNING: chimeric clone **** Length = 2181 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 608 tcatcatcctcttcctcttcttcatc 583
>emb|AL590708.18| Human DNA sequence from clone RP11-395P17 on chromosome 9 Contains the PCSCL gene for likely ortholog of rat peroxisomal Ca-dependent solute carrier-like protein (KIAA1896), the PTGES2 gene for prostaglandin E synthase 2 (GBF1, GBF-1, C9orf15, FLJ14038), the LCN2 gene for lipocalin 2 (oncogene 24p3) (NGAL), the C9orf16 gene for chromosome 9 open reading frame 16 (MGC4639, EST00098, FLJ12823), the CIZ1 gene for Cip1-interacting zinc finger protein (LSFR1), the DNM1 gene for dynamin 1 (DNM), the GOLGA2 gene for golgi autoantigen, golgin subfamily a, 2 (GM130, MGC20672), the gene for a novel protein and seven CpG islands, complete sequence Length = 194056 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 70400 tcatcatcctcttcctcttcttcatc 70425
>ref|XM_969658.1| PREDICTED: Tribolium castaneum similar to CG11321-PA, isoform A (LOC663619), mRNA Length = 6255 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 4814 tcatcatcctcttcctcttcttcatc 4789
>emb|BX248262.1|CNSLT1I5W human full-length cDNA clone CS0DN001YD20 of Adult brain of Homo sapiens (human) Length = 1316 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 171 tcctcttcctcttcttcatcctcatc 146
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaagaaacgaaatcaatgaccattt 141 |||||||| ||||||||||||||||| Sbjct: 72984 taaagaaaagaaatcaatgaccattt 73009
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 taaagaaacgaaatcaatgaccattt 141 |||||||| ||||||||||||||||| Sbjct: 117141 taaagaaaagaaatcaatgaccattt 117166
>gb|BC105209.1| Bos taurus cDNA clone IMAGE:7984856, partial cds Length = 1351 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctg 524 |||||||||||||||||||||| Sbjct: 1310 tcttcatcatcctcttcctctg 1289
>dbj|AK095650.1| Homo sapiens cDNA FLJ38331 fis, clone FCBBF3025285, moderately similar to Mus musculus peripherial benzodiazepine receptor associated protein (Pap7) mRNA Length = 3547 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 790 tcctcttcctcttcttcatcctcatc 765
>dbj|AK023978.1| Homo sapiens cDNA FLJ13916 fis, clone Y79AA1000342, moderately similar to Homo sapiens Ciz1 mRNA Length = 2858 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2287 tcatcatcctcttcctcttcttcatc 2262
>emb|AL929036.8| Mouse DNA sequence from clone RP24-548P4 on chromosome 2, complete sequence Length = 100285 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 tttagatctgtatttcattttt 184 |||||||||||||||||||||| Sbjct: 26130 tttagatctgtatttcattttt 26109
>gb|AC022257.19| Homo sapiens chromosome 8, clone RP11-715M14, complete sequence Length = 174545 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 443 tctttcttcacctcttggacatcctg 468 |||||| ||||||||||||||||||| Sbjct: 33423 tctttcatcacctcttggacatcctg 33398
>gb|AF266210.1|AF266210 Gillichthys mirabilis IP63-like protein mRNA, partial cds Length = 483 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctg 524 |||||||||||||||||||||| Sbjct: 86 tcttcatcatcctcttcctctg 65
>gb|AC090141.9| Homo sapiens chromosome 8, clone RP11-140A18, complete sequence Length = 156054 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 443 tctttcttcacctcttggacatcctg 468 |||||| ||||||||||||||||||| Sbjct: 45509 tctttcatcacctcttggacatcctg 45534
>gb|AC084476.1|CBRG01P23 Caenorhabditis briggsae cosmid G01P23, complete sequence Length = 20422 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatcac 539 |||||| ||||||||||| ||| | ||||||||||||| Sbjct: 16522 atcttcttcatcctcttcatcttcatcatcctcatcac 16559
>gb|AY261363.1| African swine fever virus isolate Pretorisuskop/96/4, complete genome Length = 190324 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 509 tcatcctcttcctctgcttcatcctcatca 538 |||||||| |||||| |||||||||||||| Sbjct: 174762 tcatcctcctcctcttcttcatcctcatca 174791
>gb|AC133184.3| Mus musculus BAC clone RP24-186A17 from chromosome 5, complete sequence Length = 169357 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttcatcctcatc 537 ||||||||||||| || ||||| ||||||||||| Sbjct: 146739 cttcatcatcctcatcatctgcatcatcctcatc 146706
>gb|AC007954.7|AC007954 Homo sapiens chromosome 14 clone RP11-493G17 and CTD-2516D11 map 14q24.3, complete sequence Length = 210204 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 130171 tcctcttcctcttcttcatcctcatc 130196
>emb|Y17453.1|HOSA17453 Homo sapiens LSFR1 gene, third to fifth of eight identified exons Length = 1642 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 1235 tcatcatcctcttcctcttcttcatc 1210
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||||||||||| Sbjct: 183059 tcctcttcctcttcttcatcctcatc 183084
>dbj|AB030835.1| Homo sapiens Ciz1 mRNA, complete cds Length = 2958 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatc 531 |||||||||||||||||| ||||||| Sbjct: 2368 tcatcatcctcttcctcttcttcatc 2343
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete sequence Length = 109794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 33646 tcttcatcatcctcttcctct 33666
>ref|XM_632862.1| Dictyostelium discoideum hypothetical protein (DDB0218769), partial mRNA Length = 675 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| ||||| ||||||| |||||| Sbjct: 381 atcttcatcatcctcatcctcctcttcatcatcatca 417
>ref|XM_641847.1| Dictyostelium discoideum hypothetical protein (DDB0190016), partial mRNA Length = 5253 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 563 tcttcatcatcctcttcctct 543
>ref|XM_638172.1| Dictyostelium discoideum AGC family protein kinase (DDB0185113), partial mRNA Length = 4104 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctc 534 ||||||||||| |||||| |||||||||| Sbjct: 1547 tcatcatcctcatcctcttcttcatcctc 1519
>ref|XM_464355.1| Oryza sativa (japonica cultivar-group), mRNA Length = 876 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttcatcctcatc 537 ||||||||||||||| |||| |||||||| Sbjct: 517 tcatcctcttcctcttcttcctcctcatc 489
>gb|U41026.1| Caenorhabditis elegans cosmid C28G1, complete sequence Length = 27364 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 ||||||||||||||||| ||| ||||||| Sbjct: 27098 tcttcatcatcctcttcttcttcttcatc 27126
>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence Length = 174202 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 ggaaaacattcagaccagatgagct 219 |||||||| |||||||||||||||| Sbjct: 161209 ggaaaacaatcagaccagatgagct 161233
>ref|XM_864772.1| PREDICTED: Bos taurus similar to dynein, cytoplasmic, intermediate polypeptide 1 (LOC613724), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 |||||||||||||| ||||||||| |||| Sbjct: 236 tcttcatcatcctcatcctctgctccatc 208
>gb|AC008308.9| Drosophila melanogaster clone BACR10M16, complete sequence Length = 196423 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 aaatcaatgaccatttgtttt 146 ||||||||||||||||||||| Sbjct: 181486 aaatcaatgaccatttgtttt 181466
>gb|BC060579.1| Rattus norvegicus nucleophosmin 1, mRNA (cDNA clone MGC:72897 IMAGE:6888417), complete cds Length = 1393 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| || ||| | |||||||||||| Sbjct: 619 atcttcatcatcctcatcatcttcatcatcctcatca 583
>gb|BC073449.1| Xenopus laevis cDNA clone MGC:80952 IMAGE:5516344, complete cds Length = 1193 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||||| | |||||||||||| Sbjct: 673 tcatcatcctcttcctcatcatcatcctcatca 641
>ref|XM_713014.1| Candida albicans SC5314 hypothetical protein (CaO19_5772), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcactatcaat 546 |||| |||||| |||||| | |||||||| ||||||||||| Sbjct: 137 tcataatcctcgtcctcttcgtcatcctcttcactatcaat 97
>ref|XM_712947.1| Candida albicans SC5314 hypothetical protein (CaO19_13194), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatcactatcaat 546 |||| |||||| |||||| | |||||||| ||||||||||| Sbjct: 137 tcataatcctcgtcctcttcgtcatcctcttcactatcaat 97
>gb|AC132881.10| Mus musculus chromosome 14, clone RP24-246K16, complete sequence Length = 181352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tttagatctgtatttcatttt 183 ||||||||||||||||||||| Sbjct: 181162 tttagatctgtatttcatttt 181182
>ref|XM_654420.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1908.2), mRNA Length = 2736 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 ||||||||||| ||||||||| ||||||| Sbjct: 1433 tcttcatcatcttcttcctcttcttcatc 1405
>gb|BC033658.1| Homo sapiens cDNA clone IMAGE:4393427, partial cds Length = 1404 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 319 atcttcatcatcctcttcctc 299
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence Length = 238123 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tttagatctgtatttcatttt 183 ||||||||||||||||||||| Sbjct: 57607 tttagatctgtatttcatttt 57627
>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence Length = 331039 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctc 534 ||||||||||| |||||| |||||||||| Sbjct: 271764 tcatcatcctcatcctcttcttcatcctc 271736
>gb|AC182651.2| Populus trichocarpa clone Pop1-118I23, complete sequence Length = 96071 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatca 538 |||||||||||||| ||| ||||||| |||||| Sbjct: 3576 tcatcatcctcttcttcttcttcatcatcatca 3608
>gb|BC040446.2| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone IMAGE:4214146), with apparent retained intron Length = 1482 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 389 atcttcatcatcctcttcctc 369
>ref|XM_807247.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506703.110) partial mRNA Length = 870 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 407 tcttcatcatcctcttcctct 387
>gb|BC003649.2| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone IMAGE:3534658), with apparent retained intron Length = 1285 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 214 atcttcatcatcctcttcctc 194
>ref|XM_812711.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508693.60) partial mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 |||||||| |||||||||||| ||||||| Sbjct: 569 tcttcatcttcctcttcctcttcttcatc 541
>emb|CR936359.9| Zebrafish DNA sequence from clone CH73-264B7 in linkage group 22, complete sequence Length = 114180 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 68837 tcttcatcatcctcttcctct 68857
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 195 ggaaaacattcagaccagatgagct 219 |||||||| |||||||||||||||| Sbjct: 106830 ggaaaacaatcagaccagatgagct 106806
>ref|XM_719362.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04198) partial mRNA Length = 4239 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttc 528 |||||||||||||||||||| |||| Sbjct: 3313 cttcatcatcctcttcctcttcttc 3289
>ref|XM_861338.1| PREDICTED: Canis familiaris similar to CG13624-PC, isoform C, transcript variant 3 (LOC612888), mRNA Length = 6316 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1440 atcttcataatcctcttcctcttcttcttcctc 1408
>ref|XM_847754.1| PREDICTED: Canis familiaris similar to CG13624-PC, isoform C, transcript variant 2 (LOC612888), mRNA Length = 6199 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1440 atcttcataatcctcttcctcttcttcttcctc 1408
>ref|XM_725583.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02756) partial mRNA Length = 3783 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatca 538 |||||||||||||| ||| ||||||| |||||| Sbjct: 434 tcatcatcctcttcatcttcttcatcttcatca 402 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 |||||| ||||||||||| ||| ||||||| |||||| Sbjct: 369 atcttcttcatcctcttcatcttcttcatcatcatca 333
>ref|XM_851073.1| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain containing 6, transcript variant 8 (LOC476301), mRNA Length = 4635 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 2576 tcttcatcatcctcttcctct 2556
>ref|XM_851034.1| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain containing 6, transcript variant 7 (LOC476301), mRNA Length = 4518 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 2576 tcttcatcatcctcttcctct 2556
>ref|XM_850955.1| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain containing 6, transcript variant 5 (LOC476301), mRNA Length = 3924 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 2207 tcttcatcatcctcttcctct 2187
>ref|XM_533505.2| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain containing 6, transcript variant 1 (LOC476301), mRNA Length = 4632 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 2576 tcttcatcatcctcttcctct 2556
>ref|NM_012749.1| Rattus norvegicus nucleolin (Ncl), mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||| |||||||| ||| | |||||||||||| Sbjct: 774 atcttcatcctcctcttcatcttcatcatcctcatca 738
>gb|AY139008.1| Homo sapiens adult retina protein mRNA, complete cds Length = 5446 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1486 atcttcataatcctcttcctcttcttcctcctc 1454
>ref|XM_786431.1| PREDICTED: Strongylocentrotus purpuratus similar to c-Maf-inducing protein Tc-mip isoform (LOC586658), mRNA Length = 465 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 tgatgagtgtctcagcacatc 386 ||||||||||||||||||||| Sbjct: 163 tgatgagtgtctcagcacatc 143
>emb|AL136369.7| Human DNA sequence from clone RP1-251M9 on chromosome 10 Contains three novel genes, complete sequence Length = 110952 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gttttggtttacacaccttac 87 ||||||||||||||||||||| Sbjct: 64592 gttttggtttacacaccttac 64612
>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the 5' end of the ADAM33 gene for a disintegrin and metalloproteinase domain 33 protein, the SN gene encoding sialoadhesin, the C20orf60 gene, the C20orf27 gene, the C20orf28 gene, the CENPB gene for centromere protein B, the CDC25B gene for cell division cycle protein 25B, the C20orf29 gene, the 5' end of the gene for a novel protein (KIAA1271) and nine CpG islands, complete sequence Length = 185820 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 109492 atcttcatcatcctcttcctc 109512
>emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 on chromosome 6p22.3-24.1 Contains part of the SCA1 gene for spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1), complete sequence Length = 165363 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcc 532 ||||||||||||||||||||| Sbjct: 23320 tcctcttcctctgcttcatcc 23340
>ref|XM_793951.1| PREDICTED: Strongylocentrotus purpuratus similar to cDNA sequence BC011426 (LOC594515), mRNA Length = 1227 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 510 catcctcttcctctgcttcatcctc 534 |||||||||||||| |||||||||| Sbjct: 307 catcctcttcctcttcttcatcctc 283
>emb|CR859539.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1824 (from clone DKFZp459N1824) Length = 4690 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 3400 tcttcatcatcctcttcctct 3420
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 1314284 atcttcatcatcctcttcctc 1314264
>ref|NM_001016760.2| Xenopus tropicalis radial spokehead-like 1 (rshl1), mRNA Length = 2299 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 ||||| |||||||||||| ||| |||||||||| Sbjct: 1645 atcttaatcatcctcttcttcttcttcatcctc 1613
>emb|BX647768.1|HSM807914 Homo sapiens mRNA; cDNA DKFZp686G2059 (from clone DKFZp686G2059) Length = 2534 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1498 atcttcataatcctcttcctcttcttcctcctc 1466
>emb|BX647573.1|HSM807719 Homo sapiens mRNA; cDNA DKFZp313F2319 (from clone DKFZp313F2319) Length = 5163 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1459 atcttcataatcctcttcctcttcttcctcctc 1427
>gb|BC085751.1| Rattus norvegicus nucleolin, mRNA (cDNA clone MGC:93572 IMAGE:7109097), complete cds Length = 2501 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||| |||||||| ||| | |||||||||||| Sbjct: 903 atcttcatcctcctcttcatcttcatcatcctcatca 867
>gb|BC088088.1| Rattus norvegicus nucleophosmin 1, mRNA (cDNA clone MGC:108517 IMAGE:7382200), complete cds Length = 1297 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| || ||| | |||||||||||| Sbjct: 605 atcttcatcatcctcatcatcttcatcatcctcatca 569
>gb|U39674.1| Caenorhabditis elegans cosmid C06E2, complete sequence Length = 47743 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 ||||||||||||||||| ||| ||||||| Sbjct: 2934 tcttcatcatcctcttcttcttcttcatc 2962
>dbj|AK124117.1| Homo sapiens cDNA FLJ42123 fis, clone TESTI2009474 Length = 1639 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1464 atcttcataatcctcttcctcttcttcctcctc 1432
>dbj|AK122675.1| Homo sapiens cDNA FLJ16122 fis, clone BLADE2008995 Length = 1979 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 447 atcttcataatcctcttcctcttcttcctcctc 415
>tpg|BK002688.1| TPA: TPA_inf: Drosophila melanogaster HDC14600 (HDC14600) gene, complete cds Length = 1635 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 134 tcttcatcatcctcttcctct 154
>emb|CR591718.1| full-length cDNA clone CS0DL010YL05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 714 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 122 atcttcatcatcctcttcctc 102
>gb|AC069548.6| Homo sapiens chromosome 10 clone RP11-522H2, complete sequence Length = 131909 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 |||||||||||| ||||| ||| ||||||| |||||| Sbjct: 59275 atcttcatcatcatcttcatcttcttcatcgtcatca 59239
>gb|U23528.1| Caenorhabditis elegans cosmid B0034, complete sequence Length = 35228 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 28418 tcttcatcatcctcttcctct 28438
>ref|NM_153607.1| Homo sapiens adult retina protein (LOC153222), mRNA Length = 5446 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1486 atcttcataatcctcttcctcttcttcctcctc 1454
>ref|XM_682197.1| PREDICTED: Danio rerio similar to oxysterol-binding protein-like 1A isoform B, transcript variant 1 (LOC565503), mRNA Length = 3838 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 1860 tcttcatcatcctcttcctct 1840
>ref|XM_703616.1| PREDICTED: Danio rerio similar to oxysterol-binding protein-like 1A isoform B, transcript variant 5 (LOC565503), mRNA Length = 3829 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 1851 tcttcatcatcctcttcctct 1831
>ref|XM_703615.1| PREDICTED: Danio rerio similar to oxysterol-binding protein-like 1A isoform B, transcript variant 4 (LOC565503), mRNA Length = 3967 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 1995 tcttcatcatcctcttcctct 1975
>ref|XM_703614.1| PREDICTED: Danio rerio similar to oxysterol-binding protein-like 1A isoform B, transcript variant 3 (LOC565503), mRNA Length = 3799 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 1860 tcttcatcatcctcttcctct 1840
>ref|XM_703613.1| PREDICTED: Danio rerio similar to oxysterol-binding protein-like 1A isoform B, transcript variant 2 (LOC565503), mRNA Length = 3799 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 1821 tcttcatcatcctcttcctct 1801
>gb|AC008378.6| Homo sapiens chromosome 5 clone CTC-209H22, complete sequence Length = 161267 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 104832 atcttcataatcctcttcctcttcttcctcctc 104864
>dbj|AB169890.1| Macaca fascicularis brain cDNA, clone: QnpA-17735, similar to human upstream binding transcription factor, RNA polymeraseI (UBTF), mRNA, RefSeq: NM_014233.1 Length = 2378 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttcatcctcatc 537 ||||| ||||||||| ||||||||||||| Sbjct: 2030 tcatcatcttcctcttcttcatcctcatc 2002
>ref|NM_001810.5| Homo sapiens centromere protein B, 80kDa (CENPB), mRNA Length = 2856 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 1785 atcttcatcatcctcttcctc 1765
>gb|BC012297.1|BC012297 Homo sapiens, clone IMAGE:3447254, mRNA, partial cds Length = 1266 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 196 atcttcatcatcctcttcctc 176
>ref|NM_062791.1| Caenorhabditis elegans B0034.1 (B0034.1) mRNA, complete cds Length = 651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 472 tcttcatcatcctcttcctct 492
>ref|NM_077098.2| Caenorhabditis elegans C28G1.4 (C28G1.4) mRNA, complete cds Length = 3340 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 ||||||||||||||||| ||| ||||||| Sbjct: 149 tcttcatcatcctcttcttcttcttcatc 121
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttcatcctcatc 537 ||||||||||||||| |||| |||||||| Sbjct: 4693187 tcatcctcttcctcttcttcctcctcatc 4693159
>emb|BX324171.9| Zebrafish DNA sequence from clone DKEYP-57C9 in linkage group 5, complete sequence Length = 151068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 510 catcctcttcctctgcttcat 530 ||||||||||||||||||||| Sbjct: 127345 catcctcttcctctgcttcat 127325
>gb|AC008364.5|AC008364 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone BACR09G02, complete sequence Length = 166642 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 98840 tcttcatcatcctcttcctct 98860
>gb|AC009344.8|AC009344 Drosophila melanogaster, chromosome 3R, region 93A-93B, BAC clone BACR20N14, complete sequence Length = 173634 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 aaatcaatgaccatttgtttt 146 ||||||||||||||||||||| Sbjct: 108174 aaatcaatgaccatttgtttt 108194
>gb|AC073541.4| Homo sapiens chromosome 19 clone RP11-21H14, complete sequence Length = 176941 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ataaaaacacagttgccaaac 32 ||||||||||||||||||||| Sbjct: 70692 ataaaaacacagttgccaaac 70672
>gb|AC152417.3| Mus musculus BAC clone RP23-56I21 from chromosome 10, complete sequence Length = 233783 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcc 532 ||||||||||||||||||||| Sbjct: 123042 tcctcttcctctgcttcatcc 123022
>ref|XM_236612.3| PREDICTED: Rattus norvegicus similar to mKIAA0800 protein (predicted) (LOC315987), mRNA Length = 4623 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 4347 atcttcatcatcctcttcctc 4327
>gb|AY174896.1| Homo sapiens adult retina hypothetical protein mRNA, complete cds Length = 1672 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1485 atcttcataatcctcttcctcttcttcctcctc 1453
>gb|AF216960.1|AF216960 Pichia pastoris strain GS115 Sec12 (SEC12) gene, complete cds; and unknown gene Length = 4356 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 ||||||||||| ||||||||| ||||||| Sbjct: 3952 tcttcatcatcatcttcctcttcttcatc 3924
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttcatcctcatc 537 ||||||||||||||| |||| |||||||| Sbjct: 65259 tcatcctcttcctcttcttcctcctcatc 65231
>dbj|BS000238.1| Pan troglodytes chromosome 22 clone:PTB-016O01, map 22, complete sequences Length = 168017 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cttggacatcctgggccctgt 476 ||||||||||||||||||||| Sbjct: 36220 cttggacatcctgggccctgt 36200
>dbj|BS000237.1| Pan troglodytes chromosome 22 clone:PTB-044B23, map 22, complete sequences Length = 144611 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cttggacatcctgggccctgt 476 ||||||||||||||||||||| Sbjct: 103575 cttggacatcctgggccctgt 103555
>dbj|AK073734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I06, full insert sequence Length = 876 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttcatcctcatc 537 ||||||||||||||| |||| |||||||| Sbjct: 517 tcatcctcttcctcttcttcctcctcatc 489
>gb|BC053847.1| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone MGC:61764 IMAGE:6470289), complete cds Length = 2852 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 1785 atcttcatcatcctcttcctc 1765
>gb|BC041709.1| Homo sapiens adult retina protein, mRNA (cDNA clone MGC:49003 IMAGE:5761775), complete cds Length = 3241 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 |||||||| ||||||||||||| |||| ||||| Sbjct: 1486 atcttcataatcctcttcctcttcttcctcctc 1454
>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22, complete sequence Length = 183103 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 176145 tcttcatcatcctcttcctct 176165
>gb|AE003733.3| Drosophila melanogaster chromosome 3R, section 71 of 118 of the complete sequence Length = 235707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 aaatcaatgaccatttgtttt 146 ||||||||||||||||||||| Sbjct: 176463 aaatcaatgaccatttgtttt 176483
>gb|AE003729.3| Drosophila melanogaster chromosome 3R, section 67 of 118 of the complete sequence Length = 232477 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctct 523 ||||||||||||||||||||| Sbjct: 168792 tcttcatcatcctcttcctct 168812
>emb|CR855771.2| Xenopus tropicalis finished cDNA, clone TGas107g21 Length = 2299 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctc 534 ||||| |||||||||||| ||| |||||||||| Sbjct: 1645 atcttaatcatcctcttcttcttcttcatcctc 1613
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cttggacatcctgggccctgt 476 ||||||||||||||||||||| Sbjct: 311595 cttggacatcctgggccctgt 311575
>gb|BC084309.1| Xenopus laevis hypothetical LOC495123, mRNA (cDNA clone MGC:83322 IMAGE:6864295), complete cds Length = 2045 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 501 gatcttcatcatcctcttcctctgcttca 529 |||||||||| || ||||||||||||||| Sbjct: 552 gatcttcatcctcttcttcctctgcttca 524
>emb|AL954173.8| Zebrafish DNA sequence from clone CH211-272N13, complete sequence Length = 154587 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatc 531 ||||||||||| ||||||||| ||||||| Sbjct: 134998 tcttcatcatcatcttcctcttcttcatc 135026
>gb|AC132135.3| Mus musculus BAC clone RP23-268C21 from 10, complete sequence Length = 168874 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcc 532 ||||||||||||||||||||| Sbjct: 101376 tcctcttcctctgcttcatcc 101356
>ref|NM_012992.2| Rattus norvegicus nucleophosmin 1 (Npm1), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| || ||| | |||||||||||| Sbjct: 619 atcttcatcatcctcatcatcttcatcatcctcatca 583
>gb|M55020.1|RATNUCIA3 Rat nucleolin gene Length = 4204 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||| |||||||| ||| | |||||||||||| Sbjct: 144 atcttcatcctcctcttcatcttcatcatcctcatca 108
>gb|J03969.1|RATB23NP Rat nucleolar protein B23 mRNA, complete cds Length = 1232 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| || ||| | |||||||||||| Sbjct: 568 atcttcatcatcctcatcatcttcatcatcctcatca 532
>gb|M25062.1|RATB23B Rat nucleolar protein B23.1 mRNA, complete cds Length = 1232 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| || ||| | |||||||||||| Sbjct: 568 atcttcatcatcctcatcatcttcatcatcctcatca 532
>gb|J04943.1|RATB23A Rat nucleolar protein B23.2 mRNA, complete cds, clone JH2 Length = 1164 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||||||| || ||| | |||||||||||| Sbjct: 597 atcttcatcatcctcatcatcttcatcatcctcatca 561
>emb|X05299.1|HSCENPBR Human mRNA (~95%) for major centromere autoantigen CENP-B Length = 2617 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 1563 atcttcatcatcctcttcctc 1543
>emb|X55039.1|HSCENPB Human hCENP-B gene for centromere autoantigen B (CENP-B) Length = 3717 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctc 522 ||||||||||||||||||||| Sbjct: 2513 atcttcatcatcctcttcctc 2493
>dbj|AB033499.1| Plautia stali Vg-2 mRNA for vitellogenin-2, complete cds Length = 5644 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatca 538 |||||||||||||||||| | || ||||||||| Sbjct: 1039 tcatcatcctcttcctcttcatcttcctcatca 1071
>dbj|AP001051.1| Homo sapiens genomic DNA, chromosome 21, clone:KB161B12, MX1-D21S171 region, complete sequence Length = 84904 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cttggacatcctgggccctgt 476 ||||||||||||||||||||| Sbjct: 17869 cttggacatcctgggccctgt 17849
>dbj|AP001050.1| Homo sapiens genomic DNA, chromosome 21, clone:KB953G5, MX1-D21S171 region, complete sequence Length = 98992 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cttggacatcctgggccctgt 476 ||||||||||||||||||||| Sbjct: 89512 cttggacatcctgggccctgt 89492
>gb|AY587551.1| Cryptococcus neoformans var. neoformans pheromone transporter gene, complete cds Length = 8970 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 atcttcatcatcctcttcctctgc 525 ||||||||||||| |||||||||| Sbjct: 7760 atcttcatcatccacttcctctgc 7783
>gb|AY839948.1| Bluetongue virus vaccine strain VP2 gene, complete cds Length = 2871 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ttcatcatcctcttcctctg 524 |||||||||||||||||||| Sbjct: 1356 ttcatcatcctcttcctctg 1337
>ref|NM_006101.1| Homo sapiens kinetochore associated 2 (KNTC2), mRNA Length = 2150 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttc 528 |||||||||||||||||||| Sbjct: 1681 tcatcctcttcctctgcttc 1662
>gb|AY232823.1| Zea mays nucleosome/chromatin assembly factor group A (nfa101) mRNA, complete cds Length = 1327 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatcctcatca 538 ||||| ||||| || |||||| |||||||||||||| Sbjct: 1026 tcttcctcatcatcatcctcttcttcatcctcatca 991
>ref|XM_632999.1| Dictyostelium discoideum hypothetical protein (DDB0186533), partial mRNA Length = 5034 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcat 530 ||||||||||||||||| ||| |||||| Sbjct: 3080 tcttcatcatcctcttcttcttcttcat 3053
>gb|BC076996.1| Xenopus tropicalis v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian), mRNA (cDNA clone MGC:89626 IMAGE:6995572), complete cds Length = 1782 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1091 tcttcatcatcctcttcctc 1072
>ref|XM_632310.1| Dictyostelium discoideum hypothetical protein (DDB0215738), partial mRNA Length = 3981 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tagatctgtatttcattttt 184 |||||||||||||||||||| Sbjct: 267 tagatctgtatttcattttt 286
>ref|XM_641234.1| Dictyostelium discoideum hypothetical protein (DDB0190598), partial mRNA Length = 822 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||||| ||| | ||||||||||| Sbjct: 367 tcatcatcctcttcatcttcatcatcctcatc 398
>ref|XM_639720.1| Dictyostelium discoideum hypothetical protein (DDB0217139), partial mRNA Length = 4095 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||| ||| ||||||| ||||| Sbjct: 1425 atcttcatcatcttcttcttcttcttcatcttcatc 1390
>ref|XM_639346.1| Dictyostelium discoideum hypothetical protein (DDB0217235), partial mRNA Length = 4095 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||| ||| ||||||| ||||| Sbjct: 1425 atcttcatcatcttcttcttcttcttcatcttcatc 1390
>ref|XM_635446.1| Dictyostelium discoideum hypothetical protein (DDB0204564), partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttcatc 531 |||||||||||||||| ||| ||||||| Sbjct: 847 cttcatcatcctcttcttcttcttcatc 820
>ref|XM_634067.1| Dictyostelium discoideum hypothetical protein (DDB0185452), partial mRNA Length = 1542 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ttcatcctcatcactatcaa 545 |||||||||||||||||||| Sbjct: 480 ttcatcctcatcactatcaa 461
>ref|XM_630113.1| Dictyostelium discoideum hypothetical protein (DDB0183888), partial mRNA Length = 1665 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatcctcatca 538 ||||||||||| |||||||| |||| ||||||||| Sbjct: 599 tcttcatcatcttcttcctcatcttcttcctcatca 564
>ref|XM_512046.1| PREDICTED: Pan troglodytes similar to kinetochore associated 2; highly expressed in cancer, rich in leucine heptad repeats; highly expressed in cancer, rich in leucine heptad repeats (yeast) (LOC455320), mRNA Length = 2511 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttc 528 |||||||||||||||||||| Sbjct: 2159 tcatcctcttcctctgcttc 2140
>ref|NM_001031091.1| Gallus gallus v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) (MYCN), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 761 tcttcatcatcctcttcctc 742
>ref|NM_138970.2| Homo sapiens neurexin 3 (NRXN3), transcript variant beta, mRNA Length = 4723 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 aaatggcttttgggttttggttta 77 |||||||||||||||||| ||||| Sbjct: 2846 aaatggcttttgggtttttgttta 2869
>ref|NM_004796.3| Homo sapiens neurexin 3 (NRXN3), transcript variant alpha, mRNA Length = 6148 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 aaatggcttttgggttttggttta 77 |||||||||||||||||| ||||| Sbjct: 4271 aaatggcttttgggtttttgttta 4294
>ref|XM_513311.1| PREDICTED: Pan troglodytes similar to claspin (LOC456746), mRNA Length = 1776 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 ttcatcctcatcactatcaa 545 |||||||||||||||||||| Sbjct: 804 ttcatcctcatcactatcaa 785
>gb|BT019731.1| Homo sapiens neurogenic differentiation 1 mRNA, complete cds Length = 1071 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 499 ttgatcttcatcatcctcttcctctgcttcatcctc 534 |||||| ||||| |||||||||||| |||| ||||| Sbjct: 237 ttgatcgtcatcctcctcttcctcttcttcctcctc 202
>gb|BT019730.1| Synthetic construct Homo sapiens neurogenic differentiation 1 mRNA, partial cds Length = 1071 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 499 ttgatcttcatcatcctcttcctctgcttcatcctc 534 |||||| ||||| |||||||||||| |||| ||||| Sbjct: 237 ttgatcgtcatcctcctcttcctcttcttcctcctc 202
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 ||||| ||||||||||||||| | |||||||| Sbjct: 1290122 tcttcctcatcctcttcctcttcctcatcctc 1290091
>gb|AY423488.1| Opistophthalmus carinatus Hsp90 (HSP90) mRNA, complete cds Length = 2310 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatc 531 |||||||||||||||||||| Sbjct: 752 tcctcttcctctgcttcatc 733
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 gataatgaaaatggtgtgca 294 |||||||||||||||||||| Sbjct: 113905 gataatgaaaatggtgtgca 113886
>gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome 12, complete sequence Length = 145113 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 ||||| || |||||||||||| |||||||||| Sbjct: 131624 tcttcttcttcctcttcctcttcttcatcctc 131655
>gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, complete sequence Length = 206729 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 507 catcatcctcttcctctgcttcatcctc 534 ||||||||||||||||| |||| ||||| Sbjct: 19155 catcatcctcttcctcttcttcctcctc 19128
>gb|AC113053.21| Mus musculus chromosome 17, clone RP23-250J2, complete sequence Length = 234124 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 taataaaaacacagttgcca 29 |||||||||||||||||||| Sbjct: 45766 taataaaaacacagttgcca 45785
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcat 530 ||||||||||| ||||||||| |||||| Sbjct: 104260 tcttcatcatcttcttcctcttcttcat 104287
>gb|BC033392.1| Homo sapiens nuclear protein in testis, mRNA (cDNA clone IMAGE:4838448) Length = 3765 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tcatcctcttcctctgcttc 528 |||||||||||||||||||| Sbjct: 3157 tcatcctcttcctctgcttc 3138
>ref|XM_360770.1| Magnaporthe grisea 70-15 hypothetical protein (MG03313.4) partial mRNA Length = 4074 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 200 tcttcatcatcctcttcctc 181
>ref|XM_869891.1| PREDICTED: Bos taurus similar to Sialic acid binding Ig-like lectin 8 precursor (Siglec-8) (Sialoadhesin family member-2) (SAF-2), transcript variant 2 (LOC504258), mRNA Length = 2905 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatc 531 |||||||||||||||||||| Sbjct: 1855 tcctcttcctctgcttcatc 1874
>ref|XM_883006.1| PREDICTED: Bos taurus similar to Sialic acid binding Ig-like lectin 8 precursor (Siglec-8) (Sialoadhesin family member-2) (SAF-2), transcript variant 4 (LOC504258), mRNA Length = 2593 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatc 531 |||||||||||||||||||| Sbjct: 1543 tcctcttcctctgcttcatc 1562
>ref|XM_882998.1| PREDICTED: Bos taurus similar to Sialic acid binding Ig-like lectin 8 precursor (Siglec-8) (Sialoadhesin family member-2) (SAF-2), transcript variant 3 (LOC504258), mRNA Length = 2914 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatc 531 |||||||||||||||||||| Sbjct: 1864 tcctcttcctctgcttcatc 1883
>ref|XM_580346.2| PREDICTED: Bos taurus similar to Sialic acid binding Ig-like lectin 8 precursor (Siglec-8) (Sialoadhesin family member-2) (SAF-2), transcript variant 1 (LOC504258), mRNA Length = 2182 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatc 531 |||||||||||||||||||| Sbjct: 1132 tcctcttcctctgcttcatc 1151
>ref|XM_460784.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F10637g) partial mRNA Length = 699 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 ||||||||||| ||||| ||| |||||||||| Sbjct: 677 tcttcatcatcatcttcttcttcttcatcctc 646
>gb|BC076432.1| Danio rerio orthodenticle homolog 1 like, mRNA (cDNA clone MGC:100760 IMAGE:7138889), complete cds Length = 1660 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 |||||||||||||| ||||| |||||||||| Sbjct: 670 tcttcatcatcctcatcctcgtcttcatcctc 701
>gb|AC149223.2| Mus musculus BAC clone RP23-203K1 from chromosome 18, complete sequence Length = 202991 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tagatctgtatttcattttt 184 |||||||||||||||||||| Sbjct: 107222 tagatctgtatttcattttt 107241
>gb|AC183665.2| Pan troglodytes BAC clone CH251-655J2 from chromosome unknown, complete sequence Length = 194692 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tggcttttgggttttggttt 76 |||||||||||||||||||| Sbjct: 170336 tggcttttgggttttggttt 170355
>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete sequence Length = 180482 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tgtatttcatttttcctgta 190 |||||||||||||||||||| Sbjct: 175441 tgtatttcatttttcctgta 175422
>gb|BC009046.1| Homo sapiens neurogenic differentiation 1, mRNA (cDNA clone MGC:9038 IMAGE:3873419), complete cds Length = 1798 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 499 ttgatcttcatcatcctcttcctctgcttcatcctc 534 |||||| ||||| |||||||||||| |||| ||||| Sbjct: 305 ttgatcgtcatcctcctcttcctcttcttcctcctc 270
>gb|AC068459.9| Mus musculus chromosome 12, clone RP23-158M23, complete sequence Length = 198494 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 ||||| || |||||||||||| |||||||||| Sbjct: 6067 tcttcttcttcctcttcctcttcttcatcctc 6098
>ref|NM_011416.2| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (Smarca2), transcript variant 1, mRNA Length = 5831 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcat 530 ||||||||||| ||||||||| |||||| Sbjct: 4666 tcttcatcatcttcttcctcttcttcat 4639
>ref|NM_026003.2| Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (Smarca2), transcript variant 2, mRNA Length = 1964 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcat 530 ||||||||||| ||||||||| |||||| Sbjct: 815 tcttcatcatcttcttcctcttcttcat 788
>gb|AC161122.3| Pan troglodytes BAC clone CH251-727J16 from chromosome 7, complete sequence Length = 211581 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tggcttttgggttttggttt 76 |||||||||||||||||||| Sbjct: 17877 tggcttttgggttttggttt 17896
>ref|NM_001001182.2| Mus musculus bromodomain adjacent to zinc finger domain, 2B (Baz2b), mRNA Length = 8012 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||||||||| ||| |||| || ||||| Sbjct: 2059 atcttcatcatcctcttcatcttcttcctcatcatc 2024
>gb|AC140251.2| Mus musculus BAC clone RP24-289C19 from chromosome 12, complete sequence Length = 177652 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 caaaacatgtgcacatgcag 405 |||||||||||||||||||| Sbjct: 139750 caaaacatgtgcacatgcag 139769
>ref|XM_711279.1| Candida albicans SC5314 putative SET3 histone deacetylase complex component Snt1p (CaO19_12706), mRNA Length = 3039 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 ||||| || ||||||||| ||||||||||||| Sbjct: 1019 tcatcttcttcttcctcttcttcatcctcatc 988
>ref|XM_711278.1| Candida albicans SC5314 hypothetical protein (CaO19_12705), mRNA Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 ||||| || ||||||||| ||||||||||||| Sbjct: 202 tcatcttcttcttcctcttcttcatcctcatc 233
>ref|XM_711217.1| Candida albicans SC5314 putative SET3 histone deacetylase complex component Snt1p (CaO19_5241), mRNA Length = 3006 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 ||||| || ||||||||| ||||||||||||| Sbjct: 1007 tcatcttcttcttcctcttcttcatcctcatc 976
>ref|XM_711216.1| Candida albicans SC5314 hypothetical protein (CaO19_5240), mRNA Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 506 tcatcatcctcttcctctgcttcatcctcatc 537 ||||| || ||||||||| ||||||||||||| Sbjct: 202 tcatcttcttcttcctcttcttcatcctcatc 233
>ref|NM_020871.2| Homo sapiens leucine-rich repeats and calponin homology (CH) domain containing 2 (LRCH2), mRNA Length = 4943 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgc 525 |||||||||||||||||||| Sbjct: 1428 tcatcatcctcttcctctgc 1409
>ref|NM_131215.2| Danio rerio orthodenticle homolog 1 like (otx1l), mRNA Length = 1660 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 |||||||||||||| ||||| |||||||||| Sbjct: 670 tcttcatcatcctcatcctcgtcttcatcctc 701
>ref|XM_846383.1| PREDICTED: Canis familiaris similar to leucine-rich repeats and calponin homology (CH) domain containing 2, transcript variant 2 (LOC492078), mRNA Length = 4939 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgc 525 |||||||||||||||||||| Sbjct: 1422 tcatcatcctcttcctctgc 1403
>ref|XM_549199.2| PREDICTED: Canis familiaris similar to leucine-rich repeats and calponin homology (CH) domain containing 2, transcript variant 1 (LOC492078), mRNA Length = 4937 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 tcatcatcctcttcctctgc 525 |||||||||||||||||||| Sbjct: 1422 tcatcatcctcttcctctgc 1403
>gb|AC115684.2| Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence Length = 82139 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgcttcatcctcatc 537 |||||||||||| ||||| ||| ||||||| ||||| Sbjct: 10661 atcttcatcatcttcttcttcttcttcatcttcatc 10626
>gb|AC140980.3| Mus musculus BAC clone RP24-255K12 from chromosome 18, complete sequence Length = 186798 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 tagatctgtatttcattttt 184 |||||||||||||||||||| Sbjct: 8691 tagatctgtatttcattttt 8710
>ref|XM_746550.1| Aspergillus fumigatus Af293 tubulin-specific chaperone (Afu4g11870) partial mRNA Length = 1890 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 gcttcatcctcatcactatc 543 |||||||||||||||||||| Sbjct: 1721 gcttcatcctcatcactatc 1702
>ref|XM_387113.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06937.1) partial mRNA Length = 441 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 tcctcttcctctgcttcatcctca 535 |||||||||||| ||||||||||| Sbjct: 122 tcctcttcctcttcttcatcctca 99
>ref|XM_388548.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08372.1) partial mRNA Length = 2472 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgc 525 |||||||||||| ||||||||||| Sbjct: 276 atcttcatcatcatcttcctctgc 253
>ref|XM_569110.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01040) partial mRNA Length = 4247 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgc 525 ||||||||||||| |||||||||| Sbjct: 3325 atcttcatcatccacttcctctgc 3302
>gb|AY363102.1|AY363102S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 1 and 2 Length = 309506 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 atcttcatcatcctcttcct 521 |||||||||||||||||||| Sbjct: 181596 atcttcatcatcctcttcct 181615
>ref|XM_447071.1| Candida glabrata CBS138, CAGL0H06347g partial mRNA Length = 1779 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 511 atcctcttcctctgcttcatcctcatca 538 ||||||||| ||| |||||||||||||| Sbjct: 999 atcctcttcgtcttcttcatcctcatca 972
>ref|XM_531902.2| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 1 (LOC474675), mRNA Length = 2468 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1325 tcttcatcatcctcttcctc 1306
>ref|XM_856003.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 13 (LOC474675), mRNA Length = 2470 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1336 tcttcatcatcctcttcctc 1317
>ref|XM_855979.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 12 (LOC474675), mRNA Length = 2468 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1325 tcttcatcatcctcttcctc 1306
>ref|XM_855950.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 11 (LOC474675), mRNA Length = 2101 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1325 tcttcatcatcctcttcctc 1306
>ref|XM_855922.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 10 (LOC474675), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1325 tcttcatcatcctcttcctc 1306
>ref|XM_855835.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 7 (LOC474675), mRNA Length = 2426 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1337 tcttcatcatcctcttcctc 1318
>ref|XM_855803.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 6 (LOC474675), mRNA Length = 2399 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1319 tcttcatcatcctcttcctc 1300
>ref|XM_855743.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 4 (LOC474675), mRNA Length = 2489 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1346 tcttcatcatcctcttcctc 1327
>ref|XM_855710.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 3 (LOC474675), mRNA Length = 2477 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1334 tcttcatcatcctcttcctc 1315
>ref|XM_855681.1| PREDICTED: Canis familiaris similar to Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin motor 3A), transcript variant 2 (LOC474675), mRNA Length = 2378 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctc 522 |||||||||||||||||||| Sbjct: 1235 tcttcatcatcctcttcctc 1216
>gb|BC049436.1| Danio rerio M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein), mRNA (cDNA clone IMAGE:5612080), containing frame-shift errors Length = 2238 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 atcttcatcatcctcttcctctgc 525 ||||||||||||||| |||||||| Sbjct: 491 atcttcatcatcctcctcctctgc 468
>ref|XM_859533.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 6 (LCR-F1), mRNA Length = 2894 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctca 535 ||||||||||||||||| |||||| Sbjct: 2037 tcctcttcctctgcttcttcctca 2060
>ref|XM_859516.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 5 (LCR-F1), mRNA Length = 2861 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctca 535 ||||||||||||||||| |||||| Sbjct: 2004 tcctcttcctctgcttcttcctca 2027
>ref|XM_537663.2| PREDICTED: Canis familiaris bZIP protein, transcript variant 1 (LCR-F1), mRNA Length = 2658 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctca 535 ||||||||||||||||| |||||| Sbjct: 1801 tcctcttcctctgcttcttcctca 1824
>ref|XM_859481.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 4 (LCR-F1), mRNA Length = 2696 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctca 535 ||||||||||||||||| |||||| Sbjct: 1839 tcctcttcctctgcttcttcctca 1862
>ref|XM_846772.1| PREDICTED: Canis familiaris bZIP protein, transcript variant 3 (LCR-F1), mRNA Length = 2984 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 tcctcttcctctgcttcatcctca 535 ||||||||||||||||| |||||| Sbjct: 2127 tcctcttcctctgcttcttcctca 2150
>ref|XM_812058.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511487.170) partial mRNA Length = 1254 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 504 cttcatcatcctcttcctctgcttcatc 531 |||||||||| ||||| ||||||||||| Sbjct: 691 cttcatcatcttcttcttctgcttcatc 664
>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence Length = 184359 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 503 tcttcatcatcctcttcctctgcttcatcctc 534 ||||| ||||||||||||||| |||| ||||| Sbjct: 114988 tcttcttcatcctcttcctcttcttcctcctc 114957 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,460,614 Number of Sequences: 3902068 Number of extensions: 6460614 Number of successful extensions: 145567 Number of sequences better than 10.0: 385 Number of HSP's better than 10.0 without gapping: 385 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144490 Number of HSP's gapped (non-prelim): 1064 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
