ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12l21 |
|---|---|
| Clone Library Name | barley_pub |
>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)| Length = 412 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 11/104 (10%) Frame = +3 Query: 15 QNKQEAGF-----YLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFT------FY 161 +N++E G ++ F G + R A+ D + Y EN ++ + Sbjct: 40 ENEEEEGISHFLEHMAFKGTKTRTAQQIAEEFDSIGGYFNAYTGHENTVYYARVLSENCH 99 Query: 162 SFIQVLVLVLDNSHLM*E*PRKELCVSVNSLHPSHHLDNPDILV 293 + +L ++ NS E KE + + + +HH DNPD L+ Sbjct: 100 KALNILADIIQNSIFADEEIAKEYQIIMQEI--AHHHDNPDDLI 141
>FZD7_XENLA (Q9PUK8) Frizzled 7 precursor (Frizzled-7) (Fz-7) (Xfz7)| Length = 549 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +2 Query: 248 LLASVSPSGQPGHTRRNXXCPFPWLCPPSSLRLCTHCSFRQ 370 L + PS Q H + P C P S+ LCT ++ Q Sbjct: 12 LFLQLCPSAQQYHGEKGISVPDHGFCQPISIPLCTDIAYNQ 52
>HS90A_MOUSE (P07901) Heat shock protein HSP 90-alpha (HSP 86) (Tumor-specific| transplantation 86 kDa antigen) (TSTA) Length = 732 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +3 Query: 15 QNKQEAGFYLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTF 158 QN+++ L +Y S S ++ VSL+ YC + EN +H F Sbjct: 454 QNRKKLSELLRYYT--------SASGDEMVSLKDYCTRMKENQKHIYF 493
>HS90A_CRIGR (P46633) Heat shock protein HSP 90-alpha (HSP 86)| Length = 732 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +3 Query: 15 QNKQEAGFYLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTF 158 QN+++ L +Y S S ++ VSL+ YC + EN +H F Sbjct: 454 QNRKKLSELLRYYT--------SASGDEMVSLKDYCTRMKENQKHIYF 493
>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)| Length = 412 Score = 28.5 bits (62), Expect = 4.0 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 11/104 (10%) Frame = +3 Query: 15 QNKQEAGF-----YLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTFY------ 161 +N +E G ++ F G + R A+ D + Y EN ++ Sbjct: 40 ENAEEDGISHFLEHMAFKGTKTRTAKQIAEAFDAIGGHFNAYTGHENTVYYARVLSENCD 99 Query: 162 SFIQVLVLVLDNSHLM*E*PRKELCVSVNSLHPSHHLDNPDILV 293 + +L ++ NS E KE V + + +HH DNPD LV Sbjct: 100 KALNILADIIQNSIFSDEEIAKEYQVIMQEI--AHHQDNPDDLV 141
>DHCR7_MIMIV (Q5UQI4) Probable 7-dehydrocholesterol reductase (EC 1.3.1.21)| (7-DHC reductase) (Sterol delta-7-reductase) Length = 447 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +1 Query: 55 AYKLVMQGIALAMKMRSHCGHI--ATRRQKTTGTSHFIVLYRC*YWSLIIHTSCEND 219 A KL+ G+ + ++ G I +T G SHFI + C Y ++++ T C D Sbjct: 363 ASKLIYSGLWGVSRHMNYTGDIILSTAYCLACGFSHFIPYFYCVYMTILLVTRCLRD 419
>SYC_BLOFL (Q7VRB4) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 474 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +3 Query: 39 YLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTFYSFIQVLVLVLD 194 YL YG Q +Y R+ T +D++ R+ K E H IQ + L LD Sbjct: 53 YLKHYGYQVKYVRNITDIDDKIIQRA--IKNNETTDHLA-SRMIQEMYLDLD 101
>FZD7_HUMAN (O75084) Frizzled 7 precursor (Frizzled-7) (Fz-7) (hFz7) (FzE3)| Length = 574 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/38 (31%), Positives = 16/38 (42%) Frame = +2 Query: 257 SVSPSGQPGHTRRNXXCPFPWLCPPSSLRLCTHCSFRQ 370 S QP H + P C P S+ LCT ++ Q Sbjct: 27 SAGAGAQPYHGEKGISVPDHGFCQPISIPLCTDIAYNQ 64
>HS90A_PIG (O02705) Heat shock protein HSP 90-alpha (HSP 86)| Length = 732 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +3 Query: 15 QNKQEAGFYLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTF 158 QN+++ L +Y S S ++ VSL+ YC + EN +H + Sbjct: 454 QNRKKLSELLRYYT--------SASGDEMVSLKDYCTRMKENQKHIYY 493
>HS90A_HORSE (Q9GKX7) Heat shock protein HSP 90-alpha (HSP 86) (Fragment)| Length = 719 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +3 Query: 15 QNKQEAGFYLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTF 158 QN+++ L +Y S S ++ VSL+ YC + EN +H + Sbjct: 444 QNRKKLSELLRYYT--------SASGDEMVSLKDYCTRMKENQKHIYY 483
>HS90A_HUMAN (P07900) Heat shock protein HSP 90-alpha (HSP 86) (NY-REN-38| antigen) Length = 731 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +3 Query: 15 QNKQEAGFYLPFYGVQARYARHSTSHEDEVSLRSYCYKKTENNRHFTF 158 QN+++ L +Y S S ++ VSL+ YC + EN +H + Sbjct: 453 QNRKKLSELLRYYT--------SASGDEMVSLKDYCTRMKENQKHIYY 492
>CCD93_XENTR (Q640U7) Coiled-coil domain-containing protein 93| Length = 610 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 3 KQLVQNKQEAGFYLPFYGVQARYARHSTSHEDEVSLR 113 K+ ++ +QE G Y+ Y V + HS + + LR Sbjct: 120 KRAIETRQEMGDYIRSYSVSQFHKEHSLPEDQDFELR 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,689,079 Number of Sequences: 219361 Number of extensions: 985286 Number of successful extensions: 1911 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1891 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1910 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
