| Clone Name | rbags12l15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F07, full insert sequence Length = 1467 Score = 367 bits (185), Expect = 3e-98 Identities = 367/427 (85%), Gaps = 3/427 (0%) Strand = Plus / Minus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 1024 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 965 Query: 240 ttcaggatgtggcagtaattcatctctatgcgaaataatctggttggcacaaccacacca 299 || ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 964 tttaggatgtggcagtaattcacctctatgcgaaataatcttgttggcacaactacacca 905 Query: 300 aatcctgcagaactcctgaacgtttttaggaactcagtaactgaaaatcttctgatatca 359 |||||||||||||||||||| |||| ||| ||||||| || | ||| | |||| |||| Sbjct: 904 aatcctgcagaactcctgaatgtttgtagaaactcagcaagagggaatttcctgagatca 845 Query: 360 cgctctgtgaacttagcatggttcccagctgagacaaatgcatggccatgaatcccaagc 419 ||||||| | || ||| | || |||||||||||||||||||||||||| || || ||| Sbjct: 844 ggctctgttagtttggcaagatttccagctgagacaaatgcatggccatggattcccagc 785 Query: 420 tccctgagtggcttcagaggtagatcaaatgacagatcagcaaaggctgtgactgctatg 479 |||||||| ||||||||||||| |||||||||||||||||||||||||||||| || ||| Sbjct: 784 tccctgagcggcttcagaggtatatcaaatgacagatcagcaaaggctgtgaccgcaatg 725 Query: 480 tcacctcccagtgcatctagctcaggagaaatggaagcagcattttcagaattcttgggg 539 ||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||| ||| Sbjct: 724 tcacctccccgtgcacttagctcaggagaagtggaagcaacattttcagaattctctggg 665 Query: 540 gcacaggtttgtgagtctgtcggtcctagccctcttgacttgaagcccaatagtgatgat 599 | || | |||| |||||||| || ||||||||| |||||| || |||||||||||| Sbjct: 664 gtactgctttgcaagtctgtc---cccagccctcttttcttgaaacctaatagtgatgat 608 Query: 600 ggtccac 606 ||||||| Sbjct: 607 ggtccac 601
>dbj|AK066650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M22, full insert sequence Length = 2818 Score = 367 bits (185), Expect = 3e-98 Identities = 367/427 (85%), Gaps = 3/427 (0%) Strand = Plus / Minus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 2375 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 2316 Query: 240 ttcaggatgtggcagtaattcatctctatgcgaaataatctggttggcacaaccacacca 299 || ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 2315 tttaggatgtggcagtaattcacctctatgcgaaataatcttgttggcacaactacacca 2256 Query: 300 aatcctgcagaactcctgaacgtttttaggaactcagtaactgaaaatcttctgatatca 359 |||||||||||||||||||| |||| ||| ||||||| || | ||| | |||| |||| Sbjct: 2255 aatcctgcagaactcctgaatgtttgtagaaactcagcaagagggaatttcctgagatca 2196 Query: 360 cgctctgtgaacttagcatggttcccagctgagacaaatgcatggccatgaatcccaagc 419 ||||||| | || ||| | || |||||||||||||||||||||||||| || || ||| Sbjct: 2195 ggctctgttagtttggcaagatttccagctgagacaaatgcatggccatggattcccagc 2136 Query: 420 tccctgagtggcttcagaggtagatcaaatgacagatcagcaaaggctgtgactgctatg 479 |||||||| ||||||||||||| |||||||||||||||||||||||||||||| || ||| Sbjct: 2135 tccctgagcggcttcagaggtatatcaaatgacagatcagcaaaggctgtgaccgcaatg 2076 Query: 480 tcacctcccagtgcatctagctcaggagaaatggaagcagcattttcagaattcttgggg 539 ||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||| ||| Sbjct: 2075 tcacctccccgtgcacttagctcaggagaagtggaagcaacattttcagaattctctggg 2016 Query: 540 gcacaggtttgtgagtctgtcggtcctagccctcttgacttgaagcccaatagtgatgat 599 | || | |||| |||||||| || ||||||||| |||||| || |||||||||||| Sbjct: 2015 gtactgctttgcaagtctgtc---cccagccctcttttcttgaaacctaatagtgatgat 1959 Query: 600 ggtccac 606 ||||||| Sbjct: 1958 ggtccac 1952
>dbj|AK067668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K16, full insert sequence Length = 1909 Score = 359 bits (181), Expect = 7e-96 Identities = 366/427 (85%), Gaps = 3/427 (0%) Strand = Plus / Minus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 1677 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 1618 Query: 240 ttcaggatgtggcagtaattcatctctatgcgaaataatctggttggcacaaccacacca 299 || ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 1617 tttaggatgtggcagtaattcacctctatgcgaaataatcttgttggcacaactacacca 1558 Query: 300 aatcctgcagaactcctgaacgtttttaggaactcagtaactgaaaatcttctgatatca 359 |||||||||||||||||||| |||| ||| ||||||| || | ||| | |||| |||| Sbjct: 1557 aatcctgcagaactcctgaatgtttgtagaaactcagcaagagggaatttcctgagatca 1498 Query: 360 cgctctgtgaacttagcatggttcccagctgagacaaatgcatggccatgaatcccaagc 419 ||||||| | || ||| | || |||||||||||||||||||||||||| || || ||| Sbjct: 1497 ggctctgttagtttggcaagatttccagctgagacaaatgcatggccatggattcccagc 1438 Query: 420 tccctgagtggcttcagaggtagatcaaatgacagatcagcaaaggctgtgactgctatg 479 |||||||| ||||||||||||| |||||||||||||||||||||||||||||| || ||| Sbjct: 1437 tccctgagaggcttcagaggtatatcaaatgacagatcagcaaaggctgtgaccgcaatg 1378 Query: 480 tcacctcccagtgcatctagctcaggagaaatggaagcagcattttcagaattcttgggg 539 ||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||| ||| Sbjct: 1377 tcacctccccgtgcacttagctcaggagaagtggaagcaacattttcagaattctctggg 1318 Query: 540 gcacaggtttgtgagtctgtcggtcctagccctcttgacttgaagcccaatagtgatgat 599 | || | || | |||||||| || ||||||||| |||||| || |||||||||||| Sbjct: 1317 gtactgcttcgcaagtctgtc---cccagccctcttttcttgaaacctaatagtgatgat 1261 Query: 600 ggtccac 606 ||||||| Sbjct: 1260 ggtccac 1254
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 297 bits (150), Expect = 2e-77 Identities = 296/344 (86%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 286642 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 286701 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 286702 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 286761 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 286762 tccagctgagacaaatgcatggccatggattcccagctccctgagcggcttcagaggtat 286821 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 286822 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 286881 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | |||| |||||||| Sbjct: 286882 aggagaagtggaagcaacattttcagaattctctggggtactgctttgcaagtctgtc-- 286939 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 286940 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 286982 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 286477 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 286536 Query: 240 ttcaggatgtggcagtaattca 261 || ||||||||||||||||||| Sbjct: 286537 tttaggatgtggcagtaattca 286558
>dbj|AK072111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119I16, full insert sequence Length = 4188 Score = 297 bits (150), Expect = 2e-77 Identities = 296/344 (86%), Gaps = 3/344 (0%) Strand = Plus / Minus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 4099 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 4040 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 4039 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 3980 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 3979 tccagctgagacaaatgcatggccatggattcccagctccctgagcggcttcagaggtat 3920 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 3919 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 3860 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | |||| |||||||| Sbjct: 3859 aggagaagtggaagcaacattttcagaattctctggggtactgctttgcaagtctgtc-- 3802 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 3801 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 3759
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 297 bits (150), Expect = 2e-77 Identities = 296/344 (86%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 286642 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 286701 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 286702 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 286761 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 286762 tccagctgagacaaatgcatggccatggattcccagctccctgagcggcttcagaggtat 286821 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 286822 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 286881 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | |||| |||||||| Sbjct: 286882 aggagaagtggaagcaacattttcagaattctctggggtactgctttgcaagtctgtc-- 286939 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 286940 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 286982 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 286477 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 286536 Query: 240 ttcaggatgtggcagtaattca 261 || ||||||||||||||||||| Sbjct: 286537 tttaggatgtggcagtaattca 286558
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 297 bits (150), Expect = 2e-77 Identities = 296/344 (86%), Gaps = 3/344 (0%) Strand = Plus / Minus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 18351 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 18292 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 18291 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 18232 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 18231 tccagctgagacaaatgcatggccatggattcccagctccctgagcggcttcagaggtat 18172 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 18171 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 18112 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | |||| |||||||| Sbjct: 18111 aggagaagtggaagcaacattttcagaattctctggggtactgctttgcaagtctgtc-- 18054 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 18053 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 18011 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 18516 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 18457 Query: 240 ttcaggatgtggcagtaattca 261 || ||||||||||||||||||| Sbjct: 18456 tttaggatgtggcagtaattca 18435
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 289 bits (146), Expect = 5e-75 Identities = 295/344 (85%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 301636 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 301695 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 301696 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 301755 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 301756 tccagctgagacaaatgcatggccatggattcccagctccctgagaggcttcagaggtat 301815 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 301816 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 301875 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | || | |||||||| Sbjct: 301876 aggagaagtggaagcaacattttcagaattctctggggtactgcttcgcaagtctgtc-- 301933 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 301934 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 301976 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 301471 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 301530 Query: 240 ttcaggatgtggcagtaattca 261 || ||||||||||||||||||| Sbjct: 301531 tttaggatgtggcagtaattca 301552
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 289 bits (146), Expect = 5e-75 Identities = 295/344 (85%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 301636 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 301695 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 301696 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 301755 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 301756 tccagctgagacaaatgcatggccatggattcccagctccctgagaggcttcagaggtat 301815 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 301816 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 301875 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | || | |||||||| Sbjct: 301876 aggagaagtggaagcaacattttcagaattctctggggtactgcttcgcaagtctgtc-- 301933 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 301934 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 301976 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 301471 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 301530 Query: 240 ttcaggatgtggcagtaattca 261 || ||||||||||||||||||| Sbjct: 301531 tttaggatgtggcagtaattca 301552
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 289 bits (146), Expect = 5e-75 Identities = 295/344 (85%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 263 ctctatgcgaaataatctggttggcacaaccacaccaaatcctgcagaactcctgaacgt 322 |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 34687 ctctatgcgaaataatcttgttggcacaactacaccaaatcctgcagaactcctgaatgt 34746 Query: 323 ttttaggaactcagtaactgaaaatcttctgatatcacgctctgtgaacttagcatggtt 382 || ||| ||||||| || | ||| | |||| |||| ||||||| | || ||| | || Sbjct: 34747 ttgtagaaactcagcaagagggaatttcctgagatcaggctctgttagtttggcaagatt 34806 Query: 383 cccagctgagacaaatgcatggccatgaatcccaagctccctgagtggcttcagaggtag 442 |||||||||||||||||||||||||| || || ||||||||||| ||||||||||||| Sbjct: 34807 tccagctgagacaaatgcatggccatggattcccagctccctgagaggcttcagaggtat 34866 Query: 443 atcaaatgacagatcagcaaaggctgtgactgctatgtcacctcccagtgcatctagctc 502 |||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| Sbjct: 34867 atcaaatgacagatcagcaaaggctgtgaccgcaatgtcacctccccgtgcacttagctc 34926 Query: 503 aggagaaatggaagcagcattttcagaattcttgggggcacaggtttgtgagtctgtcgg 562 ||||||| |||||||| ||||||||||||||| |||| || | || | |||||||| Sbjct: 34927 aggagaagtggaagcaacattttcagaattctctggggtactgcttcgcaagtctgtc-- 34984 Query: 563 tcctagccctcttgacttgaagcccaatagtgatgatggtccac 606 || ||||||||| |||||| || ||||||||||||||||||| Sbjct: 34985 -cccagccctcttttcttgaaacctaatagtgatgatggtccac 35027 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 180 aattagggcgaagagaagttaaactgtatgcctgtcttcgccttgtcatgatcaaactgt 239 |||||||||||||| ||||| |||||||| || | |||| | ||||| |||||||||| Sbjct: 34522 aattagggcgaagaaaagttcaactgtatccccgccttcccgaggtcataatcaaactgt 34581 Query: 240 ttcaggatgtggcagtaattca 261 || ||||||||||||||||||| Sbjct: 34582 tttaggatgtggcagtaattca 34603
>emb|BX005121.8| Zebrafish DNA sequence from clone DKEY-5E16 in linkage group 20, complete sequence Length = 211231 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 ||||||||||||||||||||||||| Sbjct: 146157 aaattaatacaaatattcatcttca 146133
>emb|BX000470.24| Zebrafish DNA sequence from clone DKEY-16N16 in linkage group 1, complete sequence Length = 237809 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 135 aaaattaatacaaatattcatcttcata 162 ||||||||||||||||||||| |||||| Sbjct: 197852 aaaattaatacaaatattcattttcata 197879
>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence Length = 165319 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatctt 158 ||||||||||||||||||||||| Sbjct: 20374 aaattaatacaaatattcatctt 20352
>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence Length = 237945 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 501 tcaggagaaatggaagcagcatttt 525 |||||||||||| |||||||||||| Sbjct: 38422 tcaggagaaatgaaagcagcatttt 38398
>emb|BX936329.9| Zebrafish DNA sequence from clone CH211-1F1 in linkage group 3, complete sequence Length = 76179 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 aaattaatacaaatattcatcttca 160 |||| |||||||||||||||||||| Sbjct: 41196 aaatgaatacaaatattcatcttca 41220
>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15, complete sequence Length = 166308 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 |||||||||||||||||||| |||| Sbjct: 34877 aaattaatacaaatattcattttca 34853
>emb|AL365510.32| Human DNA sequence from clone RP11-429H9 on chromosome 10 Contains the 3' end of a variant of a novel gene (FLJ33990), a phosphatidylinositol-4-phosphate 5-kinase, type I alpha (PIP5K1A) pseudogene, the proteasome (prosome macropain) 26S subunit non-ATPase 4 pseudogene 2 (PSMD4P2), the 5' end of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516), the 3' end of a novel transcript and two CpG islands, complete sequence Length = 180189 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 tggcttcagaggtagatcaaa 448 ||||||||||||||||||||| Sbjct: 2590 tggcttcagaggtagatcaaa 2610
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 ggaaaaaagaagaatgacaag 119 ||||||||||||||||||||| Sbjct: 2123841 ggaaaaaagaagaatgacaag 2123821
>emb|BX323869.7| Zebrafish DNA sequence from clone CH211-206K18 in linkage group 4 Contains the gene for a novel protein similar to vertebrate minichromosome maintenance deficient 10 (S.cerevisiae) (MCM10), the gene for a novel protein (zgc:86930), the gene for a novel protein (zgc:73119), the 5' end of the gene for a novel protein similar to vertebrate PCTAIRE protein kinase 2 (PCTK2), the gene for a novel protein similar to vertebrate phytanoyl-CoA hydroxylase (Refsum disease) (PHYH) and a CpG island, complete sequence Length = 160964 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 |||| |||||||||||||||||||| Sbjct: 32158 aaatcaatacaaatattcatcttca 32134
>emb|BX294129.10| Zebrafish DNA sequence from clone DKEYP-34H12 in linkage group 13, complete sequence Length = 156627 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 |||| |||||||||||||||||||| Sbjct: 35566 aaatgaatacaaatattcatcttca 35542
>emb|BX322530.5| Zebrafish DNA sequence from clone DKEY-19N13 in linkage group 16, complete sequence Length = 159319 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 |||||||||||||||||||| |||| Sbjct: 124573 aaattaatacaaatattcattttca 124549
>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15, complete sequence Length = 164720 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 aaattaatacaaatattcatcttca 160 |||||||||||||||||||| |||| Sbjct: 117834 aaattaatacaaatattcattttca 117858
>gb|AC152954.1| Mus musculus 6 BAC RP23-296N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203474 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 501 tcaggagaaatggaagcagcatttt 525 |||||||||||| |||||||||||| Sbjct: 11616 tcaggagaaatgaaagcagcatttt 11640
>gb|AC112697.4| Homo sapiens BAC clone RP11-562O10 from 2, complete sequence Length = 94769 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cccagctgagacaaatgcatg 403 ||||||||||||||||||||| Sbjct: 40295 cccagctgagacaaatgcatg 40275
>gb|AC105105.10| Homo sapiens chromosome 18, clone RP11-1151B14, complete sequence Length = 147826 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 tcaggagaaatggaagcagca 521 ||||||||||||||||||||| Sbjct: 54135 tcaggagaaatggaagcagca 54115
>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence Length = 212729 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tcatcttcatagaaaggtgtc 172 ||||||||||||||||||||| Sbjct: 43389 tcatcttcatagaaaggtgtc 43409
>ref|XM_236197.3| PREDICTED: Rattus norvegicus epithelial V-like antigen (predicted) (Eva_predicted), mRNA Length = 1784 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 498 agctcaggagaaatggaagca 518 ||||||||||||||||||||| Sbjct: 184 agctcaggagaaatggaagca 164
>emb|BX322536.4| Zebrafish DNA sequence from clone DKEY-174K12 in linkage group 5, complete sequence Length = 93492 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 |||||||||||||||||||| |||| Sbjct: 32405 aaattaatacaaatattcattttca 32381
>gb|AC102313.8| Mus musculus chromosome 1, clone RP24-435B20, complete sequence Length = 143900 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 tctgtgaacttagcatggttc 383 ||||||||||||||||||||| Sbjct: 7459 tctgtgaacttagcatggttc 7479
>gb|AC138585.14| Mus musculus chromosome 3, clone RP23-174P13, complete sequence Length = 209896 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 gagaaatggaagcagcatttt 525 ||||||||||||||||||||| Sbjct: 84263 gagaaatggaagcagcatttt 84243
>gb|AC110192.14| Mus musculus chromosome 7, clone RP23-227K15, complete sequence Length = 181287 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gacaagtggggtcatattaag 134 ||||||||||||||||||||| Sbjct: 100651 gacaagtggggtcatattaag 100631
>emb|BX000472.8| Zebrafish DNA sequence from clone DKEY-77H17, complete sequence Length = 172174 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcatcttca 160 |||||||||||||||||||| |||| Sbjct: 168338 aaattaatacaaatattcattttca 168314
>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete sequence Length = 190178 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 taagaaaattaatacaaatat 151 ||||||||||||||||||||| Sbjct: 10014 taagaaaattaatacaaatat 9994
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence Length = 183664 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 tctgtgaacttagcatggttc 383 ||||||||||||||||||||| Sbjct: 95042 tctgtgaacttagcatggttc 95062
>gb|AC159431.1| Trypanosoma brucei chromosome 8 clone RPCI93-28F14, complete sequence Length = 132418 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 agaaaggtgtcgcaaaagaa 181 |||||||||||||||||||| Sbjct: 108304 agaaaggtgtcgcaaaagaa 108323
>gb|AC119406.6| Trypanosoma brucei chromosome 8 clone RPCI93-28L1, complete sequence Length = 134874 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 agaaaggtgtcgcaaaagaa 181 |||||||||||||||||||| Sbjct: 2546 agaaaggtgtcgcaaaagaa 2565
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 agaaaggtgtcgcaaaagaa 181 |||||||||||||||||||| Sbjct: 929553 agaaaggtgtcgcaaaagaa 929572
>ref|XM_819268.1| Trypanosoma brucei TREU927 clone RPCI93-28F14 coronin (Tb927.8.3100) partial mRNA Length = 1572 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 agaaaggtgtcgcaaaagaa 181 |||||||||||||||||||| Sbjct: 539 agaaaggtgtcgcaaaagaa 558
>ref|XM_749019.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g15120) partial mRNA Length = 372 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 tagcatggttcccagctgagacaa 396 ||||||||||||| |||||||||| Sbjct: 177 tagcatggttcccggctgagacaa 154
>gb|AC127278.4| Mus musculus BAC clone RP24-224D24 from chromosome 18, complete sequence Length = 149172 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 aaaaaagaagaatgacaagtgggg 124 ||||| |||||||||||||||||| Sbjct: 33741 aaaaatgaagaatgacaagtgggg 33718
>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence Length = 124972 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 attaagaaaattaatacaaatatt 152 ||||| |||||||||||||||||| Sbjct: 83507 attaaaaaaattaatacaaatatt 83530
>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence Length = 127295 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 attaagaaaattaatacaaatatt 152 ||||| |||||||||||||||||| Sbjct: 42974 attaaaaaaattaatacaaatatt 42951
>emb|AL356278.8| Human DNA sequence from clone RP11-515J24 on chromosome 6, complete sequence Length = 182510 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 acaaatgcatggccatgaat 412 |||||||||||||||||||| Sbjct: 112799 acaaatgcatggccatgaat 112818
>gb|AC144764.4| Homo sapiens 3 BAC RP11-557B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 202771 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gaagtttctaagagaggctc 87 |||||||||||||||||||| Sbjct: 25413 gaagtttctaagagaggctc 25432
>emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0042I07, complete sequence Length = 129198 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tattaagaaaattaatacaa 147 |||||||||||||||||||| Sbjct: 94568 tattaagaaaattaatacaa 94587
>gb|AC091912.3| Homo sapiens chromosome 5 clone RP11-215I16, complete sequence Length = 149270 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 ttaaactgtatgcctgtcttcgccttgt 225 ||||||||||||||| |||| ||||||| Sbjct: 5319 ttaaactgtatgcctctctttgccttgt 5292
>gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, complete sequence Length = 166125 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 attaagaaaattaatacaaatatt 152 ||||| |||||||||||||||||| Sbjct: 3670 attaataaaattaatacaaatatt 3647
>gb|AC022360.23| Homo sapiens 8 BAC RP11-58O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171991 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tggggtcatattaagaaaattaat 143 |||||||||||||| ||||||||| Sbjct: 26618 tggggtcatattaaaaaaattaat 26641
>gb|AC090365.7| Homo sapiens chromosome 18, clone RP11-885L22, complete sequence Length = 125792 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 attaagaaaattaatacaaatatt 152 ||||| |||||||||||||||||| Sbjct: 103502 attaataaaattaatacaaatatt 103479
>emb|CR391153.1| Gallus gallus finished cDNA, clone ChEST200o11 Length = 973 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcaggatgtggcagtaattc 260 |||||||||||||||||||| Sbjct: 342 tcaggatgtggcagtaattc 323
>gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosome 12, complete sequence Length = 211156 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 agaaatggaagcagcatttt 525 |||||||||||||||||||| Sbjct: 133127 agaaatggaagcagcatttt 133146
>emb|BX548256.7| Zebrafish DNA sequence from clone DKEYP-75B4 in linkage group 1, complete sequence Length = 181272 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 aattaatacaaatattcatcttca 160 ||||||||||||||||||| |||| Sbjct: 78220 aattaatacaaatattcattttca 78197
>gb|AC021020.3|AC021020 Homo sapiens BAC clone RP11-557B13 from 3, complete sequence Length = 202771 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gaagtttctaagagaggctc 87 |||||||||||||||||||| Sbjct: 177359 gaagtttctaagagaggctc 177340
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tattaagaaaattaatacaa 147 |||||||||||||||||||| Sbjct: 18004288 tattaagaaaattaatacaa 18004307
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 tattaagaaaattaatacaaatat 151 |||||| ||||||||||||||||| Sbjct: 3319137 tattaaaaaaattaatacaaatat 3319114
>gb|AC126182.2| Homo sapiens 3 BAC RP11-359H3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196944 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 agaaaattaatacaaatatt 152 |||||||||||||||||||| Sbjct: 54150 agaaaattaatacaaatatt 54169
>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence Length = 212749 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 atgatcaaactgtttcagga 246 |||||||||||||||||||| Sbjct: 104872 atgatcaaactgtttcagga 104891
>emb|BX005166.14| Zebrafish DNA sequence from clone CH211-137K18 in linkage group 3, complete sequence Length = 178013 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 atattaagaaaattaatacaaata 150 ||||||| |||||||||||||||| Sbjct: 36081 atattaataaaattaatacaaata 36058
>gb|AC009289.8|AC009289 Homo sapiens, clone RP11-44J3, complete sequence Length = 146010 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 agaaaattaatacaaatatt 152 |||||||||||||||||||| Sbjct: 109116 agaaaattaatacaaatatt 109135
>emb|BX005406.8| Zebrafish DNA sequence from clone CH211-169P10 in linkage group 8, complete sequence Length = 132872 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 431 cttcagaggtagatcaaatgacag 454 |||||||||||| ||||||||||| Sbjct: 55496 cttcagaggtagttcaaatgacag 55519
>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome Length = 860631 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 tattaagaaaattaatacaaatat 151 |||||| ||||||||||||||||| Sbjct: 750898 tattaaaaaaattaatacaaatat 750921
>dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16L22 Length = 79109 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 tcatcatcacctactgtttg 66 |||||||||||||||||||| Sbjct: 7593 tcatcatcacctactgtttg 7612
>emb|AL954331.8| Zebrafish DNA sequence from clone CH211-79E4 in linkage group 7, complete sequence Length = 193627 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 aaattaatacaaatattcat 155 |||||||||||||||||||| Sbjct: 29087 aaattaatacaaatattcat 29106
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 tattaagaaaattaatacaaatat 151 |||||| ||||||||||||||||| Sbjct: 128830 tattaaaaaaattaatacaaatat 128807
>dbj|AP002370.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-160H12, complete sequence Length = 174697 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aggatgtggcagtaattcat 262 |||||||||||||||||||| Sbjct: 72120 aggatgtggcagtaattcat 72101
>dbj|AP000773.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-97P20, complete sequences Length = 170434 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aggatgtggcagtaattcat 262 |||||||||||||||||||| Sbjct: 166927 aggatgtggcagtaattcat 166908
>emb|AL928930.9| Mouse DNA sequence from clone RP23-386P7 on chromosome 2, complete sequence Length = 155721 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tctagctcaggagaaatgga 514 |||||||||||||||||||| Sbjct: 46039 tctagctcaggagaaatgga 46020
>emb|CR396594.10| Zebrafish DNA sequence from clone CH211-158B12 in linkage group 3, complete sequence Length = 48245 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 aaattaatacaaatattcat 155 |||||||||||||||||||| Sbjct: 42937 aaattaatacaaatattcat 42918 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,415,149 Number of Sequences: 3902068 Number of extensions: 6415149 Number of successful extensions: 129428 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128977 Number of HSP's gapped (non-prelim): 436 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)