>gb|AY062186.1| Oryza sativa chromatin-remodeling factor CHD3 (PKL) mRNA, complete
            cds
          Length = 4443

 Score =  117 bits (59), Expect = 5e-23
 Identities = 241/301 (80%), Gaps = 3/301 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  tcaaactgatggaggctgttggctagactcgcggaagctgccttgtcaccgcagaacgaa 381
            ||||||| ||||||||| ||||||| ||  | ||||||||||||||||||| |   ||| 
Sbjct: 3842 tcaaacttatggaggctattggctaaaccggaggaagctgccttgtcaccgaaatgcgag 3783

                                                                        
Query: 382  ttgagtgcacgtgcaccgctgtcttcaagcacaccacacatcttgttgtaaagatgggaa 441
            ||||||||| |  || | ||||||||||| |||   ||||||||||||||||||||||||
Sbjct: 3782 ttgagtgcaggaacagcactgtcttcaaggacaaagcacatcttgttgtaaagatgggaa 3723

                                                                        
Query: 442  aggtgtgcctggtcagttgagccatcagaagccacttctttggcagagattggtacaaga 501
            |  |||| ||| ||||||| ||| ||||  ||||||||||||   || || ||| |||| 
Sbjct: 3722 acttgtgactgatcagttgtgccttcaggcgccacttctttg---gaaataggttcaagg 3666

                                                                        
Query: 502  gggggaagttctctcaacacttcactgatatctggaacagctgggctatgtcccatagga 561
               || | |||||||| || |||||||   |||||||| || || ||||| ||   ||||
Sbjct: 3665 acaggcaattctctcagcatttcactgtagtctggaacggccggtctatgaccaccagga 3606

                                                                        
Query: 562  acattttgttcagtaagatcatcaggaacaggagttttcgtttttatcacagcatattca 621
            | || ||||||||  ||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 3605 aaatcttgttcagcgagatcatcaggaacaggggtttttgttttaatcacagcgtattca 3546

             
Query: 622  a 622
            |
Sbjct: 3545 a 3545



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 115  cctacacattaaccatcgatttccattttgtcctccggctttacagt 161
            |||||| |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 4091 cctacaaattaactatcgatttccattttgtcctccgccttaacagt 4045

>dbj|AK065390.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023A02, full
            insert sequence
          Length = 1605

 Score =  109 bits (55), Expect = 1e-20
 Identities = 240/301 (79%), Gaps = 3/301 (0%)
 Strand = Plus / Minus

                                                                        
Query: 322  tcaaactgatggaggctgttggctagactcgcggaagctgccttgtcaccgcagaacgaa 381
            ||||||| ||||||||| ||||||| ||  | ||||||||||||||||||| |   ||| 
Sbjct: 1086 tcaaacttatggaggctattggctaaaccggaggaagctgccttgtcaccgaaatgcgag 1027

                                                                        
Query: 382  ttgagtgcacgtgcaccgctgtcttcaagcacaccacacatcttgttgtaaagatgggaa 441
            ||||||||| |  || | ||||||||||| |||   |||||||||||||||||||| |||
Sbjct: 1026 ttgagtgcaggaacagcactgtcttcaaggacaaagcacatcttgttgtaaagatgtgaa 967

                                                                        
Query: 442  aggtgtgcctggtcagttgagccatcagaagccacttctttggcagagattggtacaaga 501
            |  |||| ||| ||||||| ||| ||||  ||||||||||||   || || ||| |||| 
Sbjct: 966  acttgtgactgatcagttgtgccttcaggcgccacttctttg---gaaataggttcaagg 910

                                                                        
Query: 502  gggggaagttctctcaacacttcactgatatctggaacagctgggctatgtcccatagga 561
               || | |||||||| || |||||||   |||||||| || || ||||| ||   ||||
Sbjct: 909  acaggcaattctctcagcatttcactgtagtctggaacggccggtctatgaccaccagga 850

                                                                        
Query: 562  acattttgttcagtaagatcatcaggaacaggagttttcgtttttatcacagcatattca 621
            | || ||||||||  ||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 849  aaatcttgttcagcgagatcatcaggaacaggggtttttgttttaatcacagcgtattca 790

             
Query: 622  a 622
            |
Sbjct: 789  a 789



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 115  cctacacattaaccatcgatttccattttgtcctccggctttacagt 161
            |||||| |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 1335 cctacaaattaactatcgatttccattttgtcctccgccttaacagt 1289

>gb|AY062188.1|AY062187S2 Oryza sativa (indica cultivar-group) chromatin-remodeling factor
           CHD3 (PKL) gene, exon 27 and complete cds
          Length = 1007

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 115 cctacacattaaccatcgatttccattttgtcctccggctttacagt 161
           |||||| |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 56  cctacaaattaactatcgatttccattttgtcctccgccttaacagt 10

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                           
Query: 423     cttgttgtaaagatgggaaaggtgtgcctggtcagttgagccatcagaagccacttcttt 482
               ||||||||||||||||||||  |||| ||| ||||||| ||| ||||  |||||||||||
Sbjct: 4178854 cttgttgtaaagatgggaaacttgtgactgatcagttgtgccttcaggcgccacttcttt 4178913

                  
Query: 483     ggc 485
               |||
Sbjct: 4178914 ggc 4178916



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                              
Query: 115     cctacacattaaccatcgatttccattttgtcctccggctttacagt 161
               |||||| |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 4178383 cctacaaattaactatcgatttccattttgtcctccgccttaacagt 4178429



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                  
Query: 322     tcaaactgatggaggctgttggctagactcgcggaagctgccttgtcaccg 372
               ||||||| ||||||||| ||||||| ||  | |||||||||||||||||||
Sbjct: 4178632 tcaaacttatggaggctattggctaaaccggaggaagctgccttgtcaccg 4178682



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 558     aggaacattttgttcagtaagatcatcaggaacaggagttttcgtttt 605
               ||||| || ||||||||  ||||||||||||||||| ||||| |||||
Sbjct: 4180431 aggaaaatcttgttcagcgagatcatcaggaacaggggtttttgtttt 4180478

>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0554A06
          Length = 165311

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 423   cttgttgtaaagatgggaaaggtgtgcctggtcagttgagccatcagaagccacttcttt 482
             ||||||||||||||||||||  |||| ||| ||||||| ||| ||||  |||||||||||
Sbjct: 24075 cttgttgtaaagatgggaaacttgtgactgatcagttgtgccttcaggcgccacttcttt 24134

                
Query: 483   ggc 485
             |||
Sbjct: 24135 ggc 24137



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 115   cctacacattaaccatcgatttccattttgtcctccggctttacagt 161
             |||||| |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 23604 cctacaaattaactatcgatttccattttgtcctccgccttaacagt 23650



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 322   tcaaactgatggaggctgttggctagactcgcggaagctgccttgtcaccg 372
             ||||||| ||||||||| ||||||| ||  | |||||||||||||||||||
Sbjct: 23853 tcaaacttatggaggctattggctaaaccggaggaagctgccttgtcaccg 23903



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 558   aggaacattttgttcagtaagatcatcaggaacaggagttttcgtttt 605
             ||||| || ||||||||  ||||||||||||||||| ||||| |||||
Sbjct: 25652 aggaaaatcttgttcagcgagatcatcaggaacaggggtttttgtttt 25699

>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0036B04
          Length = 136159

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                          
Query: 423    cttgttgtaaagatgggaaaggtgtgcctggtcagttgagccatcagaagccacttcttt 482
              ||||||||||||||||||||  |||| ||| ||||||| ||| ||||  |||||||||||
Sbjct: 112113 cttgttgtaaagatgggaaacttgtgactgatcagttgtgccttcaggcgccacttcttt 112172

                 
Query: 483    ggc 485
              |||
Sbjct: 112173 ggc 112175



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 115    cctacacattaaccatcgatttccattttgtcctccggctttacagt 161
              |||||| |||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 111642 cctacaaattaactatcgatttccattttgtcctccgccttaacagt 111688



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 322    tcaaactgatggaggctgttggctagactcgcggaagctgccttgtcaccg 372
              ||||||| ||||||||| ||||||| ||  | |||||||||||||||||||
Sbjct: 111891 tcaaacttatggaggctattggctaaaccggaggaagctgccttgtcaccg 111941



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 558    aggaacattttgttcagtaagatcatcaggaacaggagttttcgtttt 605
              ||||| || ||||||||  ||||||||||||||||| ||||| |||||
Sbjct: 113690 aggaaaatcttgttcagcgagatcatcaggaacaggggtttttgtttt 113737

>gb|AY104705.1| Zea mays PCO106433 mRNA sequence
          Length = 668

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 394 gcaccgctgtcttcaagcacaccacacatcttgttgtaaagatgggaaaggtgtgcctgg 453
           ||||| || ||||||||||| ||||||||||| ||||| ||||||| ||  |||  ||| 
Sbjct: 189 gcaccactctcttcaagcactccacacatcttattgtagagatggggaacttgtaactga 130

                                                                       
Query: 454 tcagttgagccatcagaagccacttctttggcagagattggtacaagagggggaagttct 513
            ||| || ||| |||||| ||| ||| |||| ||| |||||  |||||  ||| | ||| 
Sbjct: 129 ccagctgtgccctcagaaaccaattcattggtagaaattggctcaagattgggcaattcc 70

                                    
Query: 514 ctcaacacttcactgatatctggaa 538
           | ||||| |||||||||||||||||
Sbjct: 69  cgcaacagttcactgatatctggaa 45

>gb|AC129926.4| Homo sapiens chromosome 17, clone RP11-663N22, complete sequence
          Length = 208551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 596   ttttcgtttttatcacagcatattc 620
             |||||||||||||||||| ||||||
Sbjct: 69196 ttttcgtttttatcacagaatattc 69220



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 599   tcgtttttatcacagcatattcaa 622
             ||||||||||||||| ||||||||
Sbjct: 95179 tcgtttttatcacaggatattcaa 95202

>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12
          Length = 349080

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 554   ccataggaacattttgttcagtaag 578
             |||||||| ||||||||||||||||
Sbjct: 68924 ccataggatcattttgttcagtaag 68900

>gb|AC087297.13| Homo sapiens chromosome 17, clone RP11-362P24, complete sequence
          Length = 179026

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 596   ttttcgtttttatcacagcatattc 620
             |||||||||||||||||| ||||||
Sbjct: 54305 ttttcgtttttatcacagaatattc 54329



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 599   tcgtttttatcacagcatattcaa 622
             ||||||||||||||| ||||||||
Sbjct: 80289 tcgtttttatcacaggatattcaa 80312

>gb|AC091189.4| Homo sapiens chromosome 8, clone RP11-606D13, complete sequence
          Length = 174458

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 601   gtttttatcacagcatattca 621
             |||||||||||||||||||||
Sbjct: 74989 gtttttatcacagcatattca 74969

>gb|AC105226.4| Homo sapiens chromosome 8, clone RP11-970F14, complete sequence
          Length = 107318

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 601   gtttttatcacagcatattca 621
             |||||||||||||||||||||
Sbjct: 80742 gtttttatcacagcatattca 80722

>gb|AC116553.2| Homo sapiens chromosome 16 clone RP11-43P5, complete sequence
          Length = 173692

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 601    gtttttatcacagcatattca 621
              |||||||||||||||||||||
Sbjct: 167999 gtttttatcacagcatattca 167979

>gb|AC019041.8| Homo sapiens BAC clone RP11-4K20 from 2, complete sequence
          Length = 183358

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 606    tatcacagcatattcaatgtc 626
              |||||||||||||||||||||
Sbjct: 134413 tatcacagcatattcaatgtc 134393

>gb|AC106785.3| Homo sapiens chromosome 16 clone RP11-352B15, complete sequence
          Length = 177461

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 601   gtttttatcacagcatattca 621
             |||||||||||||||||||||
Sbjct: 92732 gtttttatcacagcatattca 92752

>ref|XM_523395.1| PREDICTED: Pan troglodytes similar to RGD, leucine-rich repeat,
            tropomodulin and proline-rich containing protein
            (LOC468003), mRNA
          Length = 4032

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 332  ggaggctgttggctagactcgcgg 355
            ||||||||||||||| ||||||||
Sbjct: 1525 ggaggctgttggctacactcgcgg 1502

>ref|XM_519928.1| PREDICTED: Pan troglodytes similar to mitochondrial ribosomal
           protein L13 (LOC464359), mRNA
          Length = 853

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 633 tttttctagaatatggtatctctt 656
           |||| |||||||||||||||||||
Sbjct: 101 ttttgctagaatatggtatctctt 124

>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication
             protein, glycoprotein, DNA replication protein, FLICE
             inhibitory protein and v-cyclin genes, complete cds, and
             tegument protein gene, partial cds
          Length = 133661

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tttgggggtagcagcgccgt 277
             ||||||||||||||||||||
Sbjct: 56028 tttgggggtagcagcgccgt 56047

>gb|AE001389.2| Plasmodium falciparum 3D7 chromosome 2 section 26 of 73 of the
            complete sequence
          Length = 10129

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 576  aagatcatcaggaacaggag 595
            ||||||||||||||||||||
Sbjct: 3674 aagatcatcaggaacaggag 3655

>gb|BC009190.2| Homo sapiens mitochondrial ribosomal protein L13, mRNA (cDNA clone
           MGC:15170 IMAGE:3956315), complete cds
          Length = 860

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 633 tttttctagaatatggtatctctt 656
           |||| |||||||||||||||||||
Sbjct: 83  ttttgctagaatatggtatctctt 106

>ref|NM_014078.4| Homo sapiens mitochondrial ribosomal protein L13 (MRPL13), nuclear
           gene encoding mitochondrial protein, mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 633 tttttctagaatatggtatctctt 656
           |||| |||||||||||||||||||
Sbjct: 352 ttttgctagaatatggtatctctt 375

>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome
          Length = 137969

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tttgggggtagcagcgccgt 277
             ||||||||||||||||||||
Sbjct: 55828 tttgggggtagcagcgccgt 55847

>emb|Z69384.1|CET11G6 Caenorhabditis elegans Cosmid T11G6, complete sequence
          Length = 29461

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   tcctcacatactttctcaaa 326
             ||||||||||||||||||||
Sbjct: 12995 tcctcacatactttctcaaa 12976

>emb|AL845465.2| Mouse DNA sequence from clone RP23-119B10 on chromosome 11, complete
             sequence
          Length = 37402

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   cgctgtcttcaagcacacca 417
             ||||||||||||||||||||
Sbjct: 18304 cgctgtcttcaagcacacca 18323

>gb|BC021744.2| Homo sapiens mitochondrial ribosomal protein L13, mRNA (cDNA clone
           MGC:33899 IMAGE:5260243), complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 633 tttttctagaatatggtatctctt 656
           |||| |||||||||||||||||||
Sbjct: 331 ttttgctagaatatggtatctctt 354

>gb|AC107877.4| Homo sapiens chromosome 8, clone RP11-74P9, complete sequence
          Length = 181925

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 633    tttttctagaatatggtatctctt 656
              |||| |||||||||||||||||||
Sbjct: 102787 ttttgctagaatatggtatctctt 102764

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 408      aagcacaccacacatcttgt 427
                ||||||||||||||||||||
Sbjct: 19082689 aagcacaccacacatcttgt 19082670

>gb|AC020589.4| Homo sapiens BAC clone RP11-143G24 from 4, complete sequence
          Length = 147185

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    tcttgttgtaaagatgggaa 441
              ||||||||||||||||||||
Sbjct: 101862 tcttgttgtaaagatgggaa 101881

>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1051_A08
          Length = 137583

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    aagcacaccacacatcttgt 427
              ||||||||||||||||||||
Sbjct: 107476 aagcacaccacacatcttgt 107457

>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0086F04
          Length = 163579

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 408  aagcacaccacacatcttgt 427
            ||||||||||||||||||||
Sbjct: 5054 aagcacaccacacatcttgt 5035

>gb|AF112214.1|AF112214 Homo sapiens ribosomal protein L13 mRNA, complete cds
          Length = 862

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 633 tttttctagaatatggtatctctt 656
           |||| |||||||||||||||||||
Sbjct: 81  ttttgctagaatatggtatctctt 104

>emb|AL928958.15| Mouse DNA sequence from clone RP23-344N23 on chromosome 2, complete
             sequence
          Length = 163351

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   tcttcaagcacaccacacat 422
             ||||||||||||||||||||
Sbjct: 22444 tcttcaagcacaccacacat 22463

>dbj|AP005364.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970D8, complete
              sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 633    tttttctagaatatggtatctctt 656
              |||| |||||||||||||||||||
Sbjct: 124382 ttttgctagaatatggtatctctt 124359

>gb|U75698.1|KSU75698 Kaposi's sarcoma-associated herpesvirus long unique region, 80 putative
             ORF's and kaposin gene, complete cds
          Length = 137508

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tttgggggtagcagcgccgt 277
             ||||||||||||||||||||
Sbjct: 55729 tttgggggtagcagcgccgt 55748

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    tctcaacacttcactgatatctgg 536
              |||||||||||||||||| |||||
Sbjct: 600016 tctcaacacttcactgatttctgg 600039

>emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3,
             complete sequence
          Length = 170964

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 595   gttttcgtttttatcacagcatat 618
             |||| |||||||||||||||||||
Sbjct: 60270 gtttacgtttttatcacagcatat 60293

>dbj|AB049640.1| Homo sapiens MRPL13 mRNA for mitochondrial ribosomal protein L13
           (L13mt), complete cds
          Length = 839

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 633 tttttctagaatatggtatctctt 656
           |||| |||||||||||||||||||
Sbjct: 78  ttttgctagaatatggtatctctt 101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,053,161
Number of Sequences: 3902068
Number of extensions: 5053161
Number of successful extensions: 92805
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92571
Number of HSP's gapped (non-prelim): 232
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)