ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12l09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106592.1| Zea mays PCO063726 mRNA sequence 58 4e-05
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.14
3gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cance... 46 0.14
4gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.14
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
6dbj|AK058992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
7gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome 44 0.56
8dbj|AK047629.1| Mus musculus adult male corpus striatum cDNA, RI... 44 0.56
9gb|AC113964.18| Mus musculus chromosome 16, clone RP23-31O16, co... 44 0.56
10gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, comp... 42 2.2
11gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chrom... 42 2.2
12gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, comp... 42 2.2
13gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromo... 42 2.2
14gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Can... 42 2.2
15gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete ... 42 2.2
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
17gb|AC012445.6| Homo sapiens BAC clone RP11-86A21 from 2, complet... 42 2.2
18dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 2.2
19dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
20gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Can... 42 2.2
21gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
22gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom... 40 8.8
23ref|NM_021431.2| Mus musculus nudix (nucleoside diphosphate link... 40 8.8
24gb|AY152853.1| Mus musculus diphosphoinositol polyphosphate phos... 40 8.8
25emb|AL450064.4| Human DNA sequence from clone RP11-134K4 on chro... 40 8.8
26emb|AL358612.9| Human DNA sequence from clone RP11-435M3 on chro... 40 8.8
27emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chro... 40 8.8
28emb|CR749434.1| Homo sapiens mRNA; cDNA DKFZp781F1053 (from clon... 40 8.8
29gb|AC093816.3| Homo sapiens BAC clone RP11-364P2 from 4, complet... 40 8.8
30gb|AC023122.9| Homo sapiens BAC clone RP11-297L21 from 3, comple... 40 8.8
31dbj|AK036077.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.8
32emb|BX465866.13| Mouse DNA sequence from clone RP23-128L16 on ch... 40 8.8
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
34gb|AC087370.26| Homo sapiens chromosome 8, clone RP11-533K17, co... 40 8.8
35gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.8
36gb|AC117709.16| Mus musculus chromosome 8, clone RP23-475N7, com... 40 8.8
37gb|BC071274.1| Mus musculus nudix (nucleoside diphosphate linked... 40 8.8
38emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in... 40 8.8
39emb|CR956421.19| Pig DNA sequence from clone PigE-225A14 on chro... 40 8.8
40dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.8
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
42dbj|AB041576.1| Mus musculus brain cDNA, clone MNCb-1696 40 8.8
43dbj|AP004582.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.8 
>gb|AY106592.1| Zea mays PCO063726 mRNA sequence
          Length = 752

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 466 aattagcaaaactgagctgcatttgttgt 494
           |||||||||||||||||||||||||||||
Sbjct: 224 aattagcaaaactgagctgcatttgttgt 196
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 361     taatccagatatgttccttgtggcctgtagcatgtccctacaa 403
               ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 9377104 taatccagatatgttccttgtgatatgtagcatggtcctacaa 9377062



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 139     gatgaaatttccaagaatgcccacaa 164
               |||||||||||||||||||| |||||
Sbjct: 9377332 gatgaaatttccaagaatgctcacaa 9377307



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 617     acatgttttcattggcaccatgac 640
               |||||||||||||| |||||||||
Sbjct: 9318223 acatgttttcattgccaccatgac 9318246
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>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160421

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 555   caagagcagctgacaataatgga 577
             |||||||||||||||||||||||
Sbjct: 40207 caagagcagctgacaataatgga 40229
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 361   taatccagatatgttccttgtggcctgtagcatgtccctacaa 403
             ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 74504 taatccagatatgttccttgtgatatgtagcatggtcctacaa 74462



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 139   gatgaaatttccaagaatgcccacaa 164
             |||||||||||||||||||| |||||
Sbjct: 74732 gatgaaatttccaagaatgctcacaa 74707



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 617   acatgttttcattggcaccatgac 640
             |||||||||||||| |||||||||
Sbjct: 15623 acatgttttcattgccaccatgac 15646
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 361     taatccagatatgttccttgtggcctgtagcatgtccctacaa 403
               ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 9375225 taatccagatatgttccttgtgatatgtagcatggtcctacaa 9375183



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 139     gatgaaatttccaagaatgcccacaa 164
               |||||||||||||||||||| |||||
Sbjct: 9375453 gatgaaatttccaagaatgctcacaa 9375428



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 617     acatgttttcattggcaccatgac 640
               |||||||||||||| |||||||||
Sbjct: 9316056 acatgttttcattgccaccatgac 9316079
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>dbj|AK058992.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F09, full
           insert sequence
          Length = 1002

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 361 taatccagatatgttccttgtggcctgtagcatgtccctacaa 403
           ||||||||||||||||||||||   |||||||||  |||||||
Sbjct: 992 taatccagatatgttccttgtgatatgtagcatggtcctacaa 950
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>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome
          Length = 1471282

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 248    tattgagcaggctggctacaaacctt 273
              ||||||| ||||||||||||||||||
Sbjct: 718305 tattgagaaggctggctacaaacctt 718280
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>dbj|AK047629.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030003K05
           product:unclassifiable, full insert sequence
          Length = 2095

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 583 taactactacatgaacatctat 604
           ||||||||||||||||||||||
Sbjct: 297 taactactacatgaacatctat 318
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>gb|AC113964.18| Mus musculus chromosome 16, clone RP23-31O16, complete sequence
          Length = 213851

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 583   taactactacatgaacatctat 604
             ||||||||||||||||||||||
Sbjct: 67069 taactactacatgaacatctat 67090
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>gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, complete sequence
          Length = 190776

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 594   tgaacatctatcacacacctt 614
             |||||||||||||||||||||
Sbjct: 24342 tgaacatctatcacacacctt 24322
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>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete
            sequence
          Length = 166684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 594  tgaacatctatcacacacctt 614
            |||||||||||||||||||||
Sbjct: 9288 tgaacatctatcacacacctt 9308
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>gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, complete sequence
          Length = 130280

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 594   tgaacatctatcacacacctt 614
             |||||||||||||||||||||
Sbjct: 37081 tgaacatctatcacacacctt 37061
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>gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromosome 7, complete
             sequence
          Length = 160056

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 594   tgaacatctatcacacacctt 614
             |||||||||||||||||||||
Sbjct: 48133 tgaacatctatcacacacctt 48113
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>gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 147486

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 137    tggatgaaatttccaagaatgccca 161
              |||||||||||| ||||||||||||
Sbjct: 103390 tggatgaaattttcaagaatgccca 103366
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>gb|AC011731.8|AC011731 Homo sapiens, clone RP11-17J14, complete sequence
          Length = 157183

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 394   gtccctacaattccacagctg 414
             |||||||||||||||||||||
Sbjct: 77479 gtccctacaattccacagctg 77499
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 64       aaatgctaataaaacaatata 84
                |||||||||||||||||||||
Sbjct: 18602704 aaatgctaataaaacaatata 18602684
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>gb|AC012445.6| Homo sapiens BAC clone RP11-86A21 from 2, complete sequence
          Length = 203428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    ttcaaatgctaataaaacaat 81
             |||||||||||||||||||||
Sbjct: 42650 ttcaaatgctaataaaacaat 42630
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 127     actccttccttggatgaaatt 147
               |||||||||||||||||||||
Sbjct: 2876474 actccttccttggatgaaatt 2876454
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>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0516D04
          Length = 140491

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    aaatgctaataaaacaatata 84
             |||||||||||||||||||||
Sbjct: 25977 aaatgctaataaaacaatata 25957
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>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207169

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 137    tggatgaaatttccaagaatgccca 161
              |||||||||||| ||||||||||||
Sbjct: 170184 tggatgaaattttcaagaatgccca 170208
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>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032M21 map C83B, complete sequence
          Length = 48636

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   aaagataatacacaatgtat 324
             ||||||||||||||||||||
Sbjct: 15319 aaagataatacacaatgtat 15300
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>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10
              map R2918, complete sequence
          Length = 149132

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    aaagataatacacaatgtat 324
              ||||||||||||||||||||
Sbjct: 132976 aaagataatacacaatgtat 132957
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>ref|NM_021431.2| Mus musculus nudix (nucleoside diphosphate linked moiety X)-type
            motif 11 (Nudt11), mRNA
          Length = 2649

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 596  aacatctatcacacaccttcaaca 619
            ||||||||||||||| ||||||||
Sbjct: 2553 aacatctatcacacagcttcaaca 2530
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>gb|AY152853.1| Mus musculus diphosphoinositol polyphosphate phosphohydrolase type 3
            (Nudt11) mRNA, complete cds
          Length = 2390

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 596  aacatctatcacacaccttcaaca 619
            ||||||||||||||| ||||||||
Sbjct: 2298 aacatctatcacacagcttcaaca 2275
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>emb|AL450064.4| Human DNA sequence from clone RP11-134K4 on chromosome 13, complete
             sequence
          Length = 61008

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   tccttccttggatgaaatttccaa 152
             ||||||||| ||||||||||||||
Sbjct: 11994 tccttcctttgatgaaatttccaa 11971
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>emb|AL358612.9| Human DNA sequence from clone RP11-435M3 on chromosome 10 Contains the
             5' end of the MYO3A gene for myosin IIIA, a novel gene and
             a CpG island, complete sequence
          Length = 174021

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    tcaaatgctaataaaacaat 81
             ||||||||||||||||||||
Sbjct: 63200 tcaaatgctaataaaacaat 63181
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>emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chromosome 4, complete
             sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   agctgccaacttccaactagcaga 433
             |||||||||||| |||||||||||
Sbjct: 27046 agctgccaacttacaactagcaga 27069
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>emb|CR749434.1| Homo sapiens mRNA; cDNA DKFZp781F1053 (from clone DKFZp781F1053)
          Length = 5011

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 609  caccttcaacatgttttcat 628
            ||||||||||||||||||||
Sbjct: 1170 caccttcaacatgttttcat 1189
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>gb|AC093816.3| Homo sapiens BAC clone RP11-364P2 from 4, complete sequence
          Length = 170227

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     aacatggacaaatcctacaaacac 118
              |||||||||||||| |||||||||
Sbjct: 122497 aacatggacaaatcttacaaacac 122520
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>gb|AC023122.9| Homo sapiens BAC clone RP11-297L21 from 3, complete sequence
          Length = 178642

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     taataaaacaatatagtacc 89
              ||||||||||||||||||||
Sbjct: 124627 taataaaacaatatagtacc 124646
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>dbj|AK036077.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630032L23 product:nudix
            (nucleoside diphosphate linked moiety X)-type motif 10,
            full insert sequence
          Length = 2067

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 596  aacatctatcacacaccttcaaca 619
            ||||||||||||||| ||||||||
Sbjct: 1884 aacatctatcacacagcttcaaca 1861
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>emb|BX465866.13| Mouse DNA sequence from clone RP23-128L16 on chromosome X, complete
             sequence
          Length = 62496

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 596   aacatctatcacacaccttcaaca 619
             ||||||||||||||| ||||||||
Sbjct: 38913 aacatctatcacacagcttcaaca 38890
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     aaagataatacacaatgtat 324
               ||||||||||||||||||||
Sbjct: 2480879 aaagataatacacaatgtat 2480860
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>gb|AC087370.26| Homo sapiens chromosome 8, clone RP11-533K17, complete sequence
          Length = 53432

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 609   caccttcaacatgttttcat 628
             ||||||||||||||||||||
Sbjct: 14678 caccttcaacatgttttcat 14659
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>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 617   acatgttttcattggcaccatgac 640
             |||||||||||||| |||||||||
Sbjct: 38030 acatgttttcattgccaccatgac 38007
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>gb|AC117709.16| Mus musculus chromosome 8, clone RP23-475N7, complete sequence
          Length = 187186

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ccagagtattgcacagatgg 242
             ||||||||||||||||||||
Sbjct: 53954 ccagagtattgcacagatgg 53973
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>gb|BC071274.1| Mus musculus nudix (nucleoside diphosphate linked moiety X)-type
            motif 11, mRNA (cDNA clone MGC:78376 IMAGE:6331160),
            complete cds
          Length = 2453

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 596  aacatctatcacacaccttcaaca 619
            ||||||||||||||| ||||||||
Sbjct: 2357 aacatctatcacacagcttcaaca 2334
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>emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in linkage group 12,
             complete sequence
          Length = 140422

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   gataatacacaatgtattcc 327
             ||||||||||||||||||||
Sbjct: 94351 gataatacacaatgtattcc 94370
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>emb|CR956421.19| Pig DNA sequence from clone PigE-225A14 on chromosome 6, complete
              sequence
          Length = 127959

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     tgcactcgccttccagcaatttct 52
              ||||||||||||||||||| ||||
Sbjct: 117556 tgcactcgccttccagcaaattct 117579
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>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10
          Length = 155723

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    caccttcaacatgttttcat 628
              ||||||||||||||||||||
Sbjct: 152091 caccttcaacatgttttcat 152072
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     aaagataatacacaatgtat 324
               ||||||||||||||||||||
Sbjct: 2489953 aaagataatacacaatgtat 2489934
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>dbj|AB041576.1| Mus musculus brain cDNA, clone MNCb-1696
          Length = 2399

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 596  aacatctatcacacaccttcaaca 619
            ||||||||||||||| ||||||||
Sbjct: 2298 aacatctatcacacagcttcaaca 2275
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>dbj|AP004582.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB925E9
          Length = 93034

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   caccttcaacatgttttcat 628
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Sbjct: 45666 caccttcaacatgttttcat 45685


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,785,200
Number of Sequences: 3902068
Number of extensions: 5785200
Number of successful extensions: 106432
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106122
Number of HSP's gapped (non-prelim): 310
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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