>ECR1_PYRAE (Q8ZVM8) Probable exosome complex RNA-binding protein 1|
          Length = 235

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
 Frame = -1

Query: 365 DWPPLPTVPDDIEAEVRVPEVDILSLLDVPPGKMGRVIGRKGSSIMAVKE-SCNVEIHIG 189
           ++P + T+ D+     +V +V+  +++++ P K+ RVIG++GS +  + E  C++ +   
Sbjct: 129 EYPIILTLKDE-----KVGKVESGTVVEITPVKVPRVIGKRGSMLNTLMELGCDIVVGQN 183

Query: 188 G-----AKGPPDRVFIIGPVKEV 135
           G      K P D VF+   ++++
Sbjct: 184 GRIWVKCKDPRDEVFLASLIRKI 206

>RRP6_YEAST (Q12149) Exosome complex exonuclease RRP6 (EC 3.1.13.-) (Ribosomal|
           RNA-processing protein 6)
          Length = 733

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 542 WKNRPLSEMMIRAATDDVRFLLNIHEKMMEKL 447
           W+ RPLS+ M   A  D  FLLNI++++  KL
Sbjct: 349 WRIRPLSKPMTAYARADTHFLLNIYDQLRNKL 380

>FUBP2_RAT (Q99PF5) Far upstream element-binding protein 2 (FUSE-binding|
           protein 2) (KH type splicing regulatory protein) (KSRP)
           (MAP2 RNA trans-acting protein 1) (MARTA1)
          Length = 721

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
 Frame = -1

Query: 386 INDNQQADWPPLPTVPDDIEAEVRV----PEVDILSLLDVPPGKMGRVIGRKGSSIMAVK 219
           + D  Q D   L +  D I +++      P   +     VP G +G +IGR G  I  ++
Sbjct: 113 LEDGDQPDSKKLASQGDSIGSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQ 172

Query: 218 E--SCNVEIHIGGAKGPPDRVFIIGPVKEVRKAE 123
           +   C V+I       P   V + G  + V+KA+
Sbjct: 173 QDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 206

>PCBP1_RABIT (O19048) Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)|
          Length = 356

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG S+  ++E     I+I     P   + + GP   + KA A
Sbjct: 24  EVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73

>PCBP1_MOUSE (P60335) Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)|
          Length = 356

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG S+  ++E     I+I     P   + + GP   + KA A
Sbjct: 24  EVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73

>PCBP1_HUMAN (Q15365) Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) (Nucleic|
           acid-binding protein SUB2.3)
          Length = 356

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG S+  ++E     I+I     P   + + GP   + KA A
Sbjct: 24  EVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 73

>PCBP2_MOUSE (Q61990) Poly(rC)-binding protein 2 (Alpha-CP2) (Putative|
           heterogeneous nuclear ribonucleoprotein X) (hnRNP X)
           (CTBP) (CBP)
          Length = 362

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG S+  ++E     I+I     P   + + GP   + KA A
Sbjct: 24  EVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73

>FUBP2_HUMAN (Q92945) Far upstream element-binding protein 2 (FUSE-binding|
           protein 2) (KH type splicing regulatory protein) (KSRP)
           (p75)
          Length = 707

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
 Frame = -1

Query: 386 INDNQQADWPPLPTVPDDIEAEVRV----PEVDILSLLDVPPGKMGRVIGRKGSSIMAVK 219
           + D  Q +   L +  D I +++      P   +     VP G +G +IGR G  I  ++
Sbjct: 112 LEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQ 171

Query: 218 E--SCNVEIHIGGAKGPPDRVFIIGPVKEVRKAE 123
           +   C V+I       P   V + G  + V+KA+
Sbjct: 172 QDSGCKVQISPDSGGLPERSVSLTGAPESVQKAK 205

>ECR1_METTH (O26780) Probable exosome complex RNA-binding protein 1|
          Length = 311

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
 Frame = -1

Query: 290 LLDVPPGKMGRVIGRKGSSIMAVKESCNVEIHIG-----GAKGPPDRVFIIGPVKEVRKA 126
           L+ + P K+ R+IG++GS I  VKE  + +I +G       KG PD   I   V  +   
Sbjct: 143 LVYITPTKVPRLIGKRGSMINMVKEKTHCDIVVGQNGVVWIKGEPDMERIAEKVVLMIDR 202

Query: 125 EAXPEG 108
           EA   G
Sbjct: 203 EAHTSG 208

>EXOSX_HUMAN (Q01780) Exosome component 10 (Polymyositis/scleroderma autoantigen|
           2) (Autoantigen PM/Scl 2) (Polymyositis/scleroderma
           autoantigen 100 kDa) (PM/Scl-100) (P100
           polymyositis-scleroderma overlap syndrome-associated
           autoantigen)
          Length = 885

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 542 WKNRPLSEMMIRAATDDVRFLLNIHEKM 459
           W+ RPL E M+  A DD  +LL I++KM
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKM 451

>PCBP2_HUMAN (Q15366) Poly(rC)-binding protein 2 (Alpha-CP2) (hnRNP-E2)|
          Length = 365

 Score = 33.1 bits (74), Expect = 0.81
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG S+  ++E     I+I     P   + + GP   + KA A
Sbjct: 24  EVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73

>PCBP3_MOUSE (P57722) Poly(rC)-binding protein 3 (Alpha-CP3)|
          Length = 339

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG ++  ++E     I+I     P   V I GP   + KA A
Sbjct: 24  EVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73

>PCBP3_HUMAN (P57721) Poly(rC)-binding protein 3 (Alpha-CP3)|
          Length = 339

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 269 KMGRVIGRKGSSIMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAEA 120
           ++G +IG+KG ++  ++E     I+I     P   V I GP   + KA A
Sbjct: 24  EVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73

>EXOSX_MOUSE (P56960) Exosome component 10 (Polymyositis/scleroderma autoantigen|
           2 homolog) (Autoantigen PM/Scl 2 homolog)
          Length = 887

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 542 WKNRPLSEMMIRAATDDVRFLLNIHEKMMEKL 447
           W+ RPL E M+  A DD  +LL I+++M  +L
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDRMRLEL 455

>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1055

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
 Frame = +1

Query: 46  KXRGSSSIYHKSPFSKIPAFGPSGIASAFLTS-FTGPMMNTLSGGPFAPPIWISTLQD-- 216
           K  GSSS++ +SP  K  + G +  A A  +  F GP   +L G  F PP+     +   
Sbjct: 383 KDSGSSSVFAESPGGKTRSAGSASTAGAPPSELFPGPGERSLVG--FGPPVPAKDTETRE 440

Query: 217 ----------SFTAIIDDPFLPITRPIFPGGTSKSERISTSGTRTSASMSSGTVGRGGQS 366
                     S T ++    L  + P  P     SE+I  S     A++ S   G GG+S
Sbjct: 441 RMEAMEKQIASLTGLVQSALLRGSEPETP-----SEKIEGS---NGAAIPSAPCGSGGRS 492

Query: 367 A 369
           +
Sbjct: 493 S 493

>HFA1_YEAST (P32874) Protein HFA1|
          Length = 2273

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
 Frame = -1

Query: 590  PEKEEVRTLLRQDPNFWKNRPLSEMMIRAATDDVRFLLNIHEKMME-KLSKVSSWRLAVR 414
            P K+ ++T    D  F  NR L  +   A + + +F+L+I++   E  + K+SS  L + 
Sbjct: 679  PPKDFLKTKFPVDFIFDNNRYLFNV---AQSSEEQFILSINKSQCEVNVQKLSSDCLLIS 735

Query: 413  SELYCRCFCINDNQQADWPPLPTVPDDIEAEVRVPEVDILSLLDVPPGKMGRVIGRKGSS 234
             +  C      D+ +     + +    +EAE+   +V     +   PGK+ + + R G  
Sbjct: 736  VDGKCHTVYWKDDIRGTRLSIDSNTIFLEAELNPTQV-----ISPTPGKLVKYLVRSGDH 790

Query: 233  IMAVKESCNVEI 198
            + A ++   +EI
Sbjct: 791  VFAGQQYAEIEI 802

>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
 Frame = +1

Query: 76   KSPFSKIPAFG--PSGIASAFLTSFTGPMMNTLSGGPFAPPIWISTLQDSFTAIIDDPF- 246
            KSP S    FG  P    S F  + T P   T +  P APP  +       +A I +P  
Sbjct: 1379 KSPVSSANIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFA-----SAAISNPSP 1433

Query: 247  --LPITRPIFPGGTSKSERISTS--GTRTSASMSSGTVGRGGQSA 369
               P TR    GG    + +  S  G    A  S G++  GG ++
Sbjct: 1434 FGSPTTRAPASGGNIFGQAVKPSVFGQPAQAGDSGGSIFGGGSAS 1478

>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1197

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
 Frame = +1

Query: 46  KXRGSSSIYHKSPFSKIPAFGPSGIASAFLTSFTGPMMNTLSGGPFAPPIWISTLQD--- 216
           K  GSSS++ +SP  K  + G S   +     F GP   +L G  F PP+     +    
Sbjct: 545 KDSGSSSVFAESPGGKARSTGASTAGAPPSELFPGPGERSLVG--FGPPVPAKDTETRER 602

Query: 217 ---------SFTAIIDDPFLPITRPIFPGGTSKSERISTSGTRTSASMSSGTVGRGGQSA 369
                    S T ++    L  + P  P     SE+I   G+  +A+ S+   G G +S+
Sbjct: 603 MEAMEKQIASLTGLVQSALLRGSEPETP-----SEKI--EGSNGAATPSAPVCGSGSRSS 655

>AKAP1_MOUSE (O08715) A kinase anchor protein 1, mitochondrial precursor|
           (Protein kinase A-anchoring protein 1) (PRKA1)
           (Dual-specificity A-kinase-anchoring protein 1)
           (D-AKAP-1) (Spermatid A-kinase anchor protein) (S-AKAP)
          Length = 857

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -1

Query: 350 PTVPDDIEAEVRVPEVDILSL-LDVPPGKMGRVIGRKGSSIMAVKESCNVEIHI 192
           P  P  ++A     +VD++   ++VP   +GR+IG++G  +  +K++   +I+I
Sbjct: 544 PDSPQSVQAGSNPKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYI 597

>ECR1_METKA (Q8TYC0) Probable exosome complex RNA-binding protein 1|
          Length = 239

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -1

Query: 329 EAEVRVPEVDILSLLDVPPGKMGRVIGRKGSSIMAVKESCNVEIHIG 189
           +A  R+  +    ++++ P K+ RVIGRKGS I  +K     +I +G
Sbjct: 142 DAPTRLGRLQGGQVVEIDPVKVPRVIGRKGSMIKMLKRVLGCDIVVG 188

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 23/78 (29%), Positives = 34/78 (43%)
 Frame = +1

Query: 136  TSFTGPMMNTLSGGPFAPPIWISTLQDSFTAIIDDPFLPITRPIFPGGTSKSERISTSGT 315
            T FT    ++  G    PP+WIST     T         +T    P GT+ + R+ T+ T
Sbjct: 4540 TGFTATPSSS-PGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIP-GTTHTARVLTTTT 4597

Query: 316  RTSASMSSGTVGRGGQSA 369
             T A+ S  T     Q++
Sbjct: 4598 TTVATGSMATPSSSTQTS 4615

>ECR1_ARCFU (O29758) Probable exosome complex RNA-binding protein 1|
          Length = 223

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -1

Query: 290 LLDVPPGKMGRVIGRKGSSIMAVKESCNVEIHIG 189
           ++ + P ++ RVIG+KGS I  +K   +V+I +G
Sbjct: 139 IVAINPARVPRVIGKKGSMIKLLKSELDVQIVVG 172

>AKAP1_RAT (O88884) A kinase anchor protein 1, mitochondrial precursor|
           (Protein kinase A-anchoring protein 1) (PRKA1) (A-kinase
           anchor protein 121 kDa) (AKAP 121) (Dual specificity
           A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid
           A-kinase anchor protei
          Length = 854

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -1

Query: 350 PTVPDDIEAEVRVPEVDILSL-LDVPPGKMGRVIGRKGSSIMAVKESCNVEIHI 192
           P  P  ++A     +VD++   ++VP   +GR+IG++G  +  +K++   +I+I
Sbjct: 541 PDSPQTVQAGSNPKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYI 594

>ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2|
          Length = 769

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 281 VPPGKMGRVIGRKGSSIMAVKE--SCNVEIHIGGAKGPPDRVFIIGPVKEVRKAE 123
           VP G +G +IGR G  I  +++   C V+I       P   V + G  + V+KA+
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAK 269

>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1250

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 13/121 (10%)
 Frame = +1

Query: 46  KXRGSSSIYHKSPFSKIPAFGPSGIASAFLTS-FTGPMMNTLSGGPFAPPIWISTLQD-- 216
           K  GSSS++ +SP  K  + G +  A A  +  F GP   +L G  F PP+     +   
Sbjct: 577 KDSGSSSVFAESPGGKARSTGSASTAGAPPSELFPGPGERSLVG--FGPPVPAKDTETRE 634

Query: 217 ----------SFTAIIDDPFLPITRPIFPGGTSKSERISTSGTRTSASMSSGTVGRGGQS 366
                     S T ++    L  + P  P     SE++   G+  +A+ S+   G G +S
Sbjct: 635 RMEAMEKQIASLTGLVQSALLRGSEPETP-----SEKV--EGSNGAATPSAPVCGSGSKS 687

Query: 367 A 369
           +
Sbjct: 688 S 688

>Y1756_CLOAB (Q97I96) UPF0109 protein CAC1756|
          Length = 75

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 341 PDDIEAEVRVPEVDILSLLDVPPGKMGRVIGRKGSSIMAVK 219
           PD+++      E  I+  L V P  MG+VIG++G    A++
Sbjct: 16  PDEVQVSEVTGEQSIILELKVAPEDMGKVIGKQGRIAKAIR 56

>LAP4_HUMAN (Q14160) LAP4 protein (Scribble homolog protein) (hScrib)|
          Length = 1630

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
 Frame = -1

Query: 389  CINDNQQADWPPLPTVPDDIEAEVR--------VPEVDILSLLDVPPGKMGRVIGRKGSS 234
            C    QQ   PP P  PD++ A V+        VP           P   G     +  S
Sbjct: 1297 CSPSGQQ---PPSPPSPDELPANVKQAYRAFAAVPTSHPPEDAPAQPPTPGPAASPEQLS 1353

Query: 233  IMAVKESCNVEIHIGGAKGPPDRVFIIGPVKEVRKAE 123
                ++   +E+ +  A+GPP RV ++G   ++RK +
Sbjct: 1354 FRERQKYFELEVRVPQAEGPPKRVSLVG-ADDLRKMQ 1389

>Y1711_CLOPE (Q8XJP5) UPF0109 protein CPE1711|
          Length = 75

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 341 PDDIEAEVRVPEVDILSLLDVPPGKMGRVIGRKGSSIMAVK 219
           P+D+     + E  I+  L V P  MG+VIG++G    A++
Sbjct: 16  PEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKAIR 56

>SCNAA_CHICK (Q92075) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 637

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -1

Query: 407 LYCRCFCINDNQQADW-PPLPTVPDDIEAEVRVPEVDILSLLDVPPG 270
           LY  C+  NDN  + W   LP + + +   VR  + D + LL    G
Sbjct: 288 LYGNCYTFNDNSSSLWTSSLPGINNGLSLVVRTEQNDFIPLLSTVTG 334

>SPHS_SYNP7 (P39664) Sensor protein sphS (EC 2.7.13.3)|
          Length = 413

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
 Frame = -1

Query: 590 PEKEEVRTLLRQDPNFWKNRPLSEMMIRA------ATDDVRFLLNI--HEKMMEKLSKVS 435
           P+ E++ T LR      ++ P+S +++ A      A    R LL +   +     L  V 
Sbjct: 40  PQLEQITTDLRDRDRLLEDLPVSFLLLDADNLVLEANRSARVLLALPPEDYCRPLLEVVR 99

Query: 434 SWRLAVRSELYCRCFCINDNQQADWPPLPTVPDDIEAEVRVPEVDILSLLDVPPGKMGRV 255
           S+ L     L  RC   N  Q   W   P  PD ++   + P       + +  G++G +
Sbjct: 100 SYEL---DRLVARCRAANAPQTDRWTLTPVNPDPLQVVPQTPRPVQGQAIPLSNGQIGVL 156

Query: 254 I 252
           I
Sbjct: 157 I 157

>GRIP2_HUMAN (Q9C0E4) Glutamate receptor-interacting protein 2 (GRIP2 protein)|
          Length = 1043

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +1

Query: 163 TLSGGPFAPPIWISTLQDSFTAIIDDPFLPITRPIFPGGTSKSERISTSGTRTSASMSSG 342
           +LS  PF+ P    TL  +F+          ++P+ P  T    R      ++S S++S 
Sbjct: 386 SLSSTPFSSP----TLNHAFSCNNPSTLPRGSQPMSPRTTMGRRRQRRREHKSSLSLASS 441

Query: 343 TVGRGGQ 363
           TVG GGQ
Sbjct: 442 TVGPGGQ 448

>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3) (Protein G3)
          Length = 1132

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
 Frame = +1

Query: 175 GPFAPPIWISTLQDSFTA--------IIDDPFLPITRPIFPGGTSKSERISTSGTRTSAS 330
           GP  PP    TL              +I  P  P  RP  PGG   S  +  +G  T+AS
Sbjct: 477 GPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGTLQGAGLGTNAS 536

Query: 331 MSSGTVGRGGQ 363
           ++    G  GQ
Sbjct: 537 LAQMVSGLVGQ 547

>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2498

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
 Frame = +1

Query: 187  PPIWISTLQDSFTAIIDDPFLPITRPIF-PGGTSKSERISTSGTRTSASMSSGTVGRGGQ 363
            PP+         T++ D   LP+TRP   P     S + S + +   + ++ G++ +G  
Sbjct: 1062 PPVLQPAPHQVITSLSDSARLPVTRPTRPPPPLIPSSKTSATSSDKPSFITGGSISQGTP 1121

Query: 364  SACWLSFMQKHLQYS--------SLRTARRHEDT 441
                 S  Q + Q +        SL   R+HE T
Sbjct: 1122 GTYLASLSQPYSQETLKPSVGSISLGLPRQHEST 1155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,622,697
Number of Sequences: 219361
Number of extensions: 2231385
Number of successful extensions: 6405
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6402
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)