ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193577.1| Oryza sativa (japonica cultivar-group), predic... 660 0.0
2dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 660 0.0
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 274 4e-70
4dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic D... 274 4e-70
5gb|BT017548.1| Zea mays clone EL01N0423H02.c mRNA sequence 167 6e-38
6ref|XM_741410.1| Aspergillus fumigatus Af293 hypothetical protei... 46 0.15
7gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Can... 44 0.60
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
9dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
10dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
11dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 44 0.60
12gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence 42 2.4
13gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Can... 42 2.4
14gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Can... 42 2.4
15gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease ... 42 2.4
16ref|XM_632648.1| Dictyostelium discoideum myosin II heavy chain ... 40 9.3
17gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.3
18gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 9.3
19gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosom... 40 9.3
20gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome... 40 9.3
21gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, com... 40 9.3
22ref|XM_446615.1| Candida glabrata CBS138, CAGL0G05830g partial mRNA 40 9.3
23gb|AC128669.4| Mus musculus BAC clone RP24-115D21 from chromosom... 40 9.3
24emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in... 40 9.3
25emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 i... 40 9.3
26ref|XM_724330.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.3
27gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, comple... 40 9.3
28emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in ... 40 9.3
29emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 40 9.3
30emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on ch... 40 9.3
31emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119... 40 9.3
32emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 9.3
33emb|AL161982.1|HSM802585 Homo sapiens genomic DNA; cDNA DKFZp761... 40 9.3
34emb|CR388146.9| Zebrafish DNA sequence from clone DKEY-205F14 in... 40 9.3
35emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in... 40 9.3
36emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, co... 40 9.3
37ref|XM_698012.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 9.3
38emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on ch... 40 9.3
39emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20,... 40 9.3
40emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in ... 40 9.3
41emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22,... 40 9.3
42emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on ch... 40 9.3
43ref|NM_067199.1| Caenorhabditis elegans Y75B8A.28 (Y75B8A.28) mR... 40 9.3
44emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in ... 40 9.3
45gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete ... 40 9.3
46emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 i... 40 9.3
47emb|AL928917.9| Zebrafish DNA sequence from clone CH211-103D12 i... 40 9.3
48emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 i... 40 9.3
49emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, compl... 40 9.3
50emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in... 40 9.3
51emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in... 40 9.3
52gb|U22443.1|EFU22443 Ellobius fuscocapillus sex-determining prot... 40 9.3
53gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, comple... 40 9.3 
>ref|NM_193577.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  660 bits (333), Expect = 0.0
 Identities = 507/565 (89%)
 Strand = Plus / Minus

                                                                        
Query: 118  atagcctccgcctttctgacttccttcactggtccaatgatgaataccctatctggaggc 177
            |||||||| || ||||||||||||| |||||||||||||||||||||||| |||||||| 
Sbjct: 1181 atagcctcagcttttctgacttcctgcactggtccaatgatgaataccctgtctggaggt 1122

                                                                        
Query: 178  ccctttgcaccaccgatatggatttcaacattgcaagattctttcacggccattattgac 237
            |||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||| 
Sbjct: 1121 ccctttgcaccaccaatatggatttcaacattgcaagatgctttcacttccattattgat 1062

                                                                        
Query: 238  gatccttttctgccaataacgcgtcccatttttccaggaggcacatctaagagcgaaagg 297
            |||||||||||||||||||| || |||||||| |||||||||||||| ||||  || |||
Sbjct: 1061 gatccttttctgccaataacacgccccattttgccaggaggcacatccaagactgacagg 1002

                                                                        
Query: 298  atatccacttcaggaacacggacttcagcttcaatgtcatcagggacagttggaagaggt 357
            |||||||| |||||||||   || |||| |||||| ||||||||||||||||||||||||
Sbjct: 1001 atatccacctcaggaacataaacatcaggttcaatttcatcagggacagttggaagaggt 942

                                                                        
Query: 358  ggccaatctgcctgctggttgtcatttatgcaaaagcacctgcagtatagctcacttcgt 417
            |||||||| || | || ||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 941  ggccaatccgcatacttgttgtcatttatgcaaaagcacctgcagtatagctcactgcga 882

                                                                        
Query: 418  actgccagacgccatgaggatactttgcttaacttctccatcattttctcatgtatattg 477
            |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 881  actgacagacgccataaagatactttgcttaacttctccatcattttctcatgtatactg 822

                                                                        
Query: 478  agaaggaagcgcacatcatctgttgctgctcgtatcatcatttcagacaagggcctattt 537
            ||||||||||| ||||||||||| |||||||| |||||||||||||| || |||||||  
Sbjct: 821  agaaggaagcggacatcatctgtggctgctcgaatcatcatttcagataaaggcctatgc 762

                                                                        
Query: 538  ttccagaaatttgggtcctgccttagaagggtacggacttcttccttttcaggatatggc 597
             |||| || || |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 761  gtccaaaagttagggtcctgccttagaagggtacggacttcttccttttcaggatatgcc 702

                                                                        
Query: 598  attccacaatagcgaggatcagcaagaaggctcacgaaggatatgtaaacatcatatgct 657
            ||||||||||| || ||||||||||| ||||| || || ||||||||  |||| ||| ||
Sbjct: 701  attccacaatatcggggatcagcaaggaggctgacaaaagatatgtactcatcgtatcct 642

                                     
Query: 658  ctctttttaccttcctgctcttcta 682
            |||||||| ||||||||||| ||||
Sbjct: 641  ctctttttcccttcctgctcctcta 617
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>dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full
            insert sequence
          Length = 1245

 Score =  660 bits (333), Expect = 0.0
 Identities = 507/565 (89%)
 Strand = Plus / Minus

                                                                        
Query: 118  atagcctccgcctttctgacttccttcactggtccaatgatgaataccctatctggaggc 177
            |||||||| || ||||||||||||| |||||||||||||||||||||||| |||||||| 
Sbjct: 1052 atagcctcagcttttctgacttcctgcactggtccaatgatgaataccctgtctggaggt 993

                                                                        
Query: 178  ccctttgcaccaccgatatggatttcaacattgcaagattctttcacggccattattgac 237
            |||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||| 
Sbjct: 992  ccctttgcaccaccaatatggatttcaacattgcaagatgctttcacttccattattgat 933

                                                                        
Query: 238  gatccttttctgccaataacgcgtcccatttttccaggaggcacatctaagagcgaaagg 297
            |||||||||||||||||||| || |||||||| |||||||||||||| ||||  || |||
Sbjct: 932  gatccttttctgccaataacacgccccattttgccaggaggcacatccaagactgacagg 873

                                                                        
Query: 298  atatccacttcaggaacacggacttcagcttcaatgtcatcagggacagttggaagaggt 357
            |||||||| |||||||||   || |||| |||||| ||||||||||||||||||||||||
Sbjct: 872  atatccacctcaggaacataaacatcaggttcaatttcatcagggacagttggaagaggt 813

                                                                        
Query: 358  ggccaatctgcctgctggttgtcatttatgcaaaagcacctgcagtatagctcacttcgt 417
            |||||||| || | || ||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 812  ggccaatccgcatacttgttgtcatttatgcaaaagcacctgcagtatagctcactgcga 753

                                                                        
Query: 418  actgccagacgccatgaggatactttgcttaacttctccatcattttctcatgtatattg 477
            |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 752  actgacagacgccataaagatactttgcttaacttctccatcattttctcatgtatactg 693

                                                                        
Query: 478  agaaggaagcgcacatcatctgttgctgctcgtatcatcatttcagacaagggcctattt 537
            ||||||||||| ||||||||||| |||||||| |||||||||||||| || |||||||  
Sbjct: 692  agaaggaagcggacatcatctgtggctgctcgaatcatcatttcagataaaggcctatgc 633

                                                                        
Query: 538  ttccagaaatttgggtcctgccttagaagggtacggacttcttccttttcaggatatggc 597
             |||| || || |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 632  gtccaaaagttagggtcctgccttagaagggtacggacttcttccttttcaggatatgcc 573

                                                                        
Query: 598  attccacaatagcgaggatcagcaagaaggctcacgaaggatatgtaaacatcatatgct 657
            ||||||||||| || ||||||||||| ||||| || || ||||||||  |||| ||| ||
Sbjct: 572  attccacaatatcggggatcagcaaggaggctgacaaaagatatgtactcatcgtatcct 513

                                     
Query: 658  ctctttttaccttcctgctcttcta 682
            |||||||| ||||||||||| ||||
Sbjct: 512  ctctttttcccttcctgctcctcta 488



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 14   gtaccacatgcatttctgtat 34
            |||||||||||||||||||||
Sbjct: 1176 gtaccacatgcatttctgtat 1156
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  274 bits (138), Expect = 4e-70
 Identities = 183/198 (92%)
 Strand = Plus / Plus

                                                                            
Query: 338      cagggacagttggaagaggtggccaatctgcctgctggttgtcatttatgcaaaagcacc 397
                |||||||||||||||||||||||||||| || | || |||||||||||||||||||||||
Sbjct: 21696812 cagggacagttggaagaggtggccaatccgcatacttgttgtcatttatgcaaaagcacc 21696871

                                                                            
Query: 398      tgcagtatagctcacttcgtactgccagacgccatgaggatactttgcttaacttctcca 457
                |||||||||||||||| || |||| |||||||||| | ||||||||||||||||||||||
Sbjct: 21696872 tgcagtatagctcactgcgaactgacagacgccataaagatactttgcttaacttctcca 21696931

                                                                            
Query: 458      tcattttctcatgtatattgagaaggaagcgcacatcatctgttgctgctcgtatcatca 517
                ||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 21696932 tcattttctcatgtatactgagaaggaagcggacatcatctgtggctgctcgaatcatca 21696991

                                  
Query: 518      tttcagacaagggcctat 535
                ||||||| || |||||||
Sbjct: 21696992 tttcagataaaggcctat 21697009



 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                            
Query: 208      ttgcaagattctttcacggccattattgacgatccttttctgccaataacgcgtcccatt 267
                ||||||||| |||||||  |||||||||| |||||||||||||||||||| || ||||||
Sbjct: 21696325 ttgcaagatgctttcacttccattattgatgatccttttctgccaataacacgccccatt 21696384

                                                                
Query: 268      tttccaggaggcacatctaagagcgaaaggatatccacttcaggaaca 315
                || |||||||||||||| ||||  || ||||||||||| |||||||||
Sbjct: 21696385 ttgccaggaggcacatccaagactgacaggatatccacctcaggaaca 21696432



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 48/49 (97%)
 Strand = Plus / Plus

                                                                 
Query: 554      cctgccttagaagggtacggacttcttccttttcaggatatggcattcc 602
                |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 21697201 cctgccttagaagggtacggacttcttccttttcaggatatgccattcc 21697249



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                    
Query: 162      taccctatctggaggcccctttgcaccaccgatatggatttcaacattgcaa 213
                |||||| |||||||| |||||||||||||| ||||||||||||||| |||||
Sbjct: 21696183 taccctgtctggaggtccctttgcaccaccaatatggatttcaacactgcaa 21696234



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                                
Query: 118      atagcctccgcctttctgacttccttcactggtccaatgatgaatacc 165
                |||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 21695305 atagcctcagcttttctgacttcctgcactggtccaatgatgaatacc 21695352



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                            
Query: 601      ccacaatagcgaggatcagcaagaaggctcacgaaggatatgtaaacatcatatgctctc 660
                |||||||| || ||||||||||| ||||| || || ||||||||  |||| ||| |||||
Sbjct: 21698131 ccacaatatcggggatcagcaaggaggctgacaaaagatatgtactcatcgtatcctctc 21698190

                                      
Query: 661      tttttaccttcctgctcttcta 682
                ||||| ||||||||||| ||||
Sbjct: 21698191 tttttcccttcctgctcctcta 21698212



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 14       gtaccacatgcatttctgtat 34
                |||||||||||||||||||||
Sbjct: 21695181 gtaccacatgcatttctgtat 21695201
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>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score =  274 bits (138), Expect = 4e-70
 Identities = 183/198 (92%)
 Strand = Plus / Plus

                                                                         
Query: 338   cagggacagttggaagaggtggccaatctgcctgctggttgtcatttatgcaaaagcacc 397
             |||||||||||||||||||||||||||| || | || |||||||||||||||||||||||
Sbjct: 48863 cagggacagttggaagaggtggccaatccgcatacttgttgtcatttatgcaaaagcacc 48922

                                                                         
Query: 398   tgcagtatagctcacttcgtactgccagacgccatgaggatactttgcttaacttctcca 457
             |||||||||||||||| || |||| |||||||||| | ||||||||||||||||||||||
Sbjct: 48923 tgcagtatagctcactgcgaactgacagacgccataaagatactttgcttaacttctcca 48982

                                                                         
Query: 458   tcattttctcatgtatattgagaaggaagcgcacatcatctgttgctgctcgtatcatca 517
             ||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 48983 tcattttctcatgtatactgagaaggaagcggacatcatctgtggctgctcgaatcatca 49042

                               
Query: 518   tttcagacaagggcctat 535
             ||||||| || |||||||
Sbjct: 49043 tttcagataaaggcctat 49060



 Score =  119 bits (60), Expect = 1e-23
 Identities = 96/108 (88%)
 Strand = Plus / Plus

                                                                         
Query: 208   ttgcaagattctttcacggccattattgacgatccttttctgccaataacgcgtcccatt 267
             ||||||||| |||||||  |||||||||| |||||||||||||||||||| || ||||||
Sbjct: 48376 ttgcaagatgctttcacttccattattgatgatccttttctgccaataacacgccccatt 48435

                                                             
Query: 268   tttccaggaggcacatctaagagcgaaaggatatccacttcaggaaca 315
             || |||||||||||||| ||||  || ||||||||||| |||||||||
Sbjct: 48436 ttgccaggaggcacatccaagactgacaggatatccacctcaggaaca 48483



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 48/49 (97%)
 Strand = Plus / Plus

                                                              
Query: 554   cctgccttagaagggtacggacttcttccttttcaggatatggcattcc 602
             |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 49252 cctgccttagaagggtacggacttcttccttttcaggatatgccattcc 49300



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                 
Query: 162   taccctatctggaggcccctttgcaccaccgatatggatttcaacattgcaa 213
             |||||| |||||||| |||||||||||||| ||||||||||||||| |||||
Sbjct: 48234 taccctgtctggaggtccctttgcaccaccaatatggatttcaacactgcaa 48285



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 118   atagcctccgcctttctgacttccttcactggtccaatgatgaatacc 165
             |||||||| || ||||||||||||| ||||||||||||||||||||||
Sbjct: 47356 atagcctcagcttttctgacttcctgcactggtccaatgatgaatacc 47403



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                         
Query: 601   ccacaatagcgaggatcagcaagaaggctcacgaaggatatgtaaacatcatatgctctc 660
             |||||||| || ||||||||||| ||||| || || ||||||||  |||| ||| |||||
Sbjct: 50182 ccacaatatcggggatcagcaaggaggctgacaaaagatatgtactcatcgtatcctctc 50241

                                   
Query: 661   tttttaccttcctgctcttcta 682
             ||||| ||||||||||| ||||
Sbjct: 50242 tttttcccttcctgctcctcta 50263



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    gtaccacatgcatttctgtat 34
             |||||||||||||||||||||
Sbjct: 47232 gtaccacatgcatttctgtat 47252
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>gb|BT017548.1| Zea mays clone EL01N0423H02.c mRNA sequence
          Length = 428

 Score =  167 bits (84), Expect = 6e-38
 Identities = 160/184 (86%), Gaps = 1/184 (0%)
 Strand = Plus / Minus

                                                                       
Query: 86  tctctaaaattccagcattcggcccctcaggnatagcctccgcctttctgacttccttca 145
           |||||| || |||||||||||||| || | | || ||||| || || |||||||| ||||
Sbjct: 193 tctctagaactccagcattcggcctctgaag-atggcctcggctttcctgacttcattca 135

                                                                       
Query: 146 ctggtccaatgatgaataccctatctggaggcccctttgcaccaccgatatggatttcaa 205
           ||| |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 134 ctgatccaatgatgaaaaccctatctggaggccccttagcaccaccaatatggatttcaa 75

                                                                       
Query: 206 cattgcaagattctttcacggccattattgacgatccttttctgccaataacgcgtccca 265
           | |||||||||||||||||  ||||||| |  || || |||||||||||||| |||||||
Sbjct: 74  cgttgcaagattctttcacaaccattatagttgacccctttctgccaataactcgtccca 15

               
Query: 266 tttt 269
           ||||
Sbjct: 14  tttt 11
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>ref|XM_741410.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g03170)
           partial mRNA
          Length = 564

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 241 ccttttctgccaataacgcgtcc 263
           |||||||||||||||||||||||
Sbjct: 139 ccttttctgccaataacgcgtcc 161
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>gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 167257

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 460   attttctcatgtatattgagaa 481
             ||||||||||||||||||||||
Sbjct: 59256 attttctcatgtatattgagaa 59235
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 578      cttccttttcaggatatggcat 599
                ||||||||||||||||||||||
Sbjct: 13045049 cttccttttcaggatatggcat 13045028
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>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 578   cttccttttcaggatatggcat 599
             ||||||||||||||||||||||
Sbjct: 83850 cttccttttcaggatatggcat 83829
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>dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B02, full
           insert sequence
          Length = 1138

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 578 cttccttttcaggatatggcat 599
           ||||||||||||||||||||||
Sbjct: 30  cttccttttcaggatatggcat 51
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>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete
             sequences
          Length = 153078

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 17    ccacatgcatttctgtattcct 38
             ||||||||||||||||||||||
Sbjct: 24785 ccacatgcatttctgtattcct 24764
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>gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence
          Length = 1244

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 245 ttctgccaataacgcgtcccatttt 269
           ||||||||||||| |||||||||||
Sbjct: 889 ttctgccaataacacgtcccatttt 865
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>gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186864

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    gaggtggccaatctgcctgct 373
              |||||||||||||||||||||
Sbjct: 135064 gaggtggccaatctgcctgct 135044
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>gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 131209

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    atgtcatcagggacagttgga 351
              |||||||||||||||||||||
Sbjct: 113158 atgtcatcagggacagttgga 113138
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>gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease domain-containing
           protein-like mRNA, complete cds
          Length = 1249

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 245 ttctgccaataacgcgtcccatttt 269
           ||||||||||||| |||||||||||
Sbjct: 867 ttctgccaataacacgtcccatttt 843
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>ref|XM_632648.1| Dictyostelium discoideum myosin II heavy chain (DDB0191444), partial
            mRNA
          Length = 6351

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ctgttgctgctcgtatcatc 516
            ||||||||||||||||||||
Sbjct: 2366 ctgttgctgctcgtatcatc 2385
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    tcacggccattattgacgat 240
              ||||||||||||||||||||
Sbjct: 939367 tcacggccattattgacgat 939386
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     atggatttcaacattgcaag 214
               ||||||||||||||||||||
Sbjct: 4500152 atggatttcaacattgcaag 4500171
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>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence
          Length = 176237

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 458   tcattttctcatgtatattgagaa 481
             ||||||||||||||| ||||||||
Sbjct: 27965 tcattttctcatgtaaattgagaa 27942
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>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete
            sequence
          Length = 207537

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 657  tctctttttaccttcctgct 676
            ||||||||||||||||||||
Sbjct: 3990 tctctttttaccttcctgct 4009
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>gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, complete sequence
          Length = 229184

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 458    tcattttctcatgtatattgagaa 481
              ||||||||||||||| ||||||||
Sbjct: 186070 tcattttctcatgtaaattgagaa 186047
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>ref|XM_446615.1| Candida glabrata CBS138, CAGL0G05830g partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 450  cttctccatcattttctcat 469
            ||||||||||||||||||||
Sbjct: 1905 cttctccatcattttctcat 1886
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>gb|AC128669.4| Mus musculus BAC clone RP24-115D21 from chromosome 17, complete sequence
          Length = 169571

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 657    tctctttttaccttcctgct 676
              ||||||||||||||||||||
Sbjct: 146774 tctctttttaccttcctgct 146793
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>emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in linkage group 14,
              complete sequence
          Length = 182719

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 119686 caaaagtcctttctctaaaa 119705
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>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
            complete sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   caaaagtcctttctctaaaa 94
            ||||||||||||||||||||
Sbjct: 1964 caaaagtcctttctctaaaa 1983
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>ref|XM_724330.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00166)
           partial mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 649 tcatatgctctctttttacc 668
           ||||||||||||||||||||
Sbjct: 70  tcatatgctctctttttacc 51
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>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    ctttgcttaacttctccatc 459
              ||||||||||||||||||||
Sbjct: 117696 ctttgcttaacttctccatc 117715
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>emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in linkage group 3,
             complete sequence
          Length = 111124

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tgcaccaccgatatggattt 202
             ||||||||||||||||||||
Sbjct: 15731 tgcaccaccgatatggattt 15712
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>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ctttctctaaaattccagca 102
              ||||||||||||||||||||
Sbjct: 112313 ctttctctaaaattccagca 112294
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>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a CpG
              island, complete sequence
          Length = 170970

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 19     acatgcatttctgtattccttgtgttca 46
              |||| |||||||||||||| ||||||||
Sbjct: 139743 acattcatttctgtattccctgtgttca 139716
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>emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119I23 on chromosome 10, complete
             sequence
          Length = 98818

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   caacattgcaagattctttc 222
             ||||||||||||||||||||
Sbjct: 23506 caacattgcaagattctttc 23487
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    cttctccatcattttctcat 469
              ||||||||||||||||||||
Sbjct: 562570 cttctccatcattttctcat 562589
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>emb|AL161982.1|HSM802585 Homo sapiens genomic DNA; cDNA DKFZp761J1224 (from clone
            DKFZp761J1224)
          Length = 5412

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  caacattgcaagattctttc 222
            ||||||||||||||||||||
Sbjct: 2048 caacattgcaagattctttc 2029
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>emb|CR388146.9| Zebrafish DNA sequence from clone DKEY-205F14 in linkage group 5,
             complete sequence
          Length = 19924

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    caaaagtcctttctctaaaa 94
             ||||||||||||||||||||
Sbjct: 19888 caaaagtcctttctctaaaa 19907
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>emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in linkage group 18,
              complete sequence
          Length = 164140

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 136757 caaaagtcctttctctaaaa 136776
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>emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, complete sequence
          Length = 160830

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caaaagtcctttctctaaaa 94
             ||||||||||||||||||||
Sbjct: 17818 caaaagtcctttctctaaaa 17799
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>ref|XM_698012.1| PREDICTED: Danio rerio hypothetical protein LOC555615 (LOC555615),
           mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 450 cttctccatcattttctcatgtat 473
           ||||||||||||| ||||||||||
Sbjct: 795 cttctccatcattgtctcatgtat 772
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>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete
             sequence
          Length = 157571

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caaaagtcctttctctaaaa 94
             ||||||||||||||||||||
Sbjct: 90135 caaaagtcctttctctaaaa 90116
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>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence
          Length = 198777

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   caaaagtcctttctctaaaa 94
            ||||||||||||||||||||
Sbjct: 9459 caaaagtcctttctctaaaa 9478
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>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17,
              complete sequence
          Length = 247607

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 151546 caaaagtcctttctctaaaa 151527
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>emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22, complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 182384 caaaagtcctttctctaaaa 182403
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>emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on chromosome 4, complete
             sequence
          Length = 192031

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   ggacagttggaagaggtggc 360
             ||||||||||||||||||||
Sbjct: 53883 ggacagttggaagaggtggc 53864
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>ref|NM_067199.1| Caenorhabditis elegans Y75B8A.28 (Y75B8A.28) mRNA, complete cds
          Length = 1092

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 583 ttttcaggatatggcattccacaa 606
           ||||||||||||| ||||||||||
Sbjct: 412 ttttcaggatatgccattccacaa 435
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>emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in linkage group 14, complete
              sequence
          Length = 265520

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 103155 caaaagtcctttctctaaaa 103136
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>gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete sequence
          Length = 136822

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    ttcagcttcaatgtcatcag 340
              ||||||||||||||||||||
Sbjct: 133796 ttcagcttcaatgtcatcag 133815
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>emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 in linkage group 18,
              complete sequence
          Length = 131062

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 117386 caaaagtcctttctctaaaa 117405
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>emb|AL928917.9| Zebrafish DNA sequence from clone CH211-103D12 in linkage group 1,
             complete sequence
          Length = 176961

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 450   cttctccatcattttctcatgtat 473
             ||||||||||||| ||||||||||
Sbjct: 83334 cttctccatcattgtctcatgtat 83311
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>emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 in linkage group 4,
             complete sequence
          Length = 125275

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caaaagtcctttctctaaaa 94
             ||||||||||||||||||||
Sbjct: 21736 caaaagtcctttctctaaaa 21717
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>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence
          Length = 298406

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 583    ttttcaggatatggcattccacaa 606
              ||||||||||||| ||||||||||
Sbjct: 251790 ttttcaggatatgccattccacaa 251813
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>emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in linkage group 4, complete
              sequence
          Length = 263674

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     caaaagtcctttctctaaaa 94
              ||||||||||||||||||||
Sbjct: 154217 caaaagtcctttctctaaaa 154236
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>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14,
             complete sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caaaagtcctttctctaaaa 94
             ||||||||||||||||||||
Sbjct: 14342 caaaagtcctttctctaaaa 14323
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>gb|U22443.1|EFU22443 Ellobius fuscocapillus sex-determining protein (Sry) gene, partial
           cds
          Length = 153

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 ccatttttccaggaggcaca 282
           ||||||||||||||||||||
Sbjct: 121 ccatttttccaggaggcaca 140
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>gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, complete cds
          Length = 6681

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 497  ctgttgctgctcgtatcatc 516
            ||||||||||||||||||||
Sbjct: 2435 ctgttgctgctcgtatcatc 2454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,499,805
Number of Sequences: 3902068
Number of extensions: 6499805
Number of successful extensions: 127267
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127007
Number of HSP's gapped (non-prelim): 259
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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