| Clone Name | rbags12k05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ref|XM_445211.1| Candida glabrata CBS138, CAGL0C00671g partial mRNA | 40 | 3.1 | 2 | emb|CR380949.1| Candida glabrata strain CBS138 chromosome C comp... | 40 | 3.1 | 3 | gb|AC006438.4| Arabidopsis thaliana chromosome 2 clone F19G14 ma... | 40 | 3.1 | 4 | gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, comple... | 40 | 3.1 |
|---|
>ref|XM_445211.1| Candida glabrata CBS138, CAGL0C00671g partial mRNA Length = 2505 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cacacgcacccgcaggagca 238 |||||||||||||||||||| Sbjct: 2161 cacacgcacccgcaggagca 2180
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence Length = 558804 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cacacgcacccgcaggagca 238 |||||||||||||||||||| Sbjct: 71556 cacacgcacccgcaggagca 71575
>gb|AC006438.4| Arabidopsis thaliana chromosome 2 clone F19G14 map mi398, complete sequence Length = 91106 Score = 40.1 bits (20), Expect = 3.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 aaaatagcagagagaangaagct 115 |||||||||||||||| |||||| Sbjct: 79251 aaaatagcagagagaaggaagct 79229
>gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, complete sequence Length = 208571 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaagacagctaccaaaatag 99 |||||||||||||||||||| Sbjct: 180999 aaagacagctaccaaaatag 181018 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,050,283 Number of Sequences: 3902068 Number of extensions: 1050283 Number of successful extensions: 16115 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 16109 Number of HSP's gapped (non-prelim): 6 length of query: 239 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 217 effective length of database: 17,147,199,772 effective search space: 3720942350524 effective search space used: 3720942350524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)