ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12k01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KGUA_THEMA (Q9X215) Guanylate kinase (EC 2.7.4.8) (GMP kinase) 33 0.48
2KGUA_CLOTE (Q895Q5) Guanylate kinase (EC 2.7.4.8) (GMP kinase) 31 2.4
3KGUA_NITEU (Q82SQ3) Guanylate kinase (EC 2.7.4.8) (GMP kinase) 30 5.3

>KGUA_THEMA (Q9X215) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 207

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 524 FDYVVVNXEGKXEDAVXQVESIIDAEKAKVQKRNVQI 414
           FDY+VVN     EDAV  V SI+ +E+AKV +   +I
Sbjct: 160 FDYIVVNEN--LEDAVEMVVSIVRSERAKVTRNQDKI 194



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>KGUA_CLOTE (Q895Q5) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 208

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 524 FDYVVVNXEGKXEDAVXQVESIIDAEKAKVQK 429
           ++Y VVN   K  DAV +++SII AEK +V +
Sbjct: 160 YNYAVVND--KVHDAVEKIQSIISAEKCRVDR 189



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>KGUA_NITEU (Q82SQ3) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 201

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -3

Query: 524 FDYVVVNXEGKXEDAVXQVESIIDAEKAKVQKRNVQ 417
           FDYVVVN E   E A   V SI+ AE+ K  ++ V+
Sbjct: 159 FDYVVVNHE--LETAARDVASIVQAERLKTIRQLVR 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,663,842
Number of Sequences: 219361
Number of extensions: 987736
Number of successful extensions: 1450
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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