>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score =  398 bits (201), Expect = e-108
 Identities = 230/242 (95%), Gaps = 1/242 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aggccttgtatntaaagtntctaatantncaatactttcaagtgaacgacaaaggtgtna 60
            ||||||||||| |||||| ||||||| | |||| |||||||||||||||||||||||| |
Sbjct: 1302 aggccttgtatataaagtttctaataatacaat-ctttcaagtgaacgacaaaggtgtaa 1244

                                                                        
Query: 61   ttggnttattggaactcaaattccgtnncgaancacagcancgaatattgacgaacccac 120
            |||| |||||||||||||||||||||  |||| ||||||| |||||||||||||||||||
Sbjct: 1243 ttggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccac 1184

                                                                        
Query: 121  ccaactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggcctt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 ccaactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggcctt 1124

                                                                        
Query: 181  aggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcacca 240
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 aggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcacca 1064

              
Query: 241  ag 242
            ||
Sbjct: 1063 ag 1062

>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 179  ttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 238
            ||||||||| | || ||||||||| ||||  |||||||||||||| ||||||||||||||
Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232

                
Query: 239  caag 242
            ||||
Sbjct: 1231 caag 1228



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 35   ctttcaagtgaacgacaaaggtgtnattggnttattggaactcaaattccgt 86
            ||||||| |||||||||| | |||  |  | |||||||||||||||||||||
Sbjct: 1410 ctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccgt 1359

>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 179  ttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 238
            |||||||||||  ||||||||||| ||||  ||||||||||| || ||||||||||||||
Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476

                
Query: 239  caag 242
            ||||
Sbjct: 1475 caag 1472



 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 66   ttattggaactcaaattccgt 86
            |||||||||||||||||||||
Sbjct: 1637 ttattggaactcaaattccgt 1617

>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence
          Length = 958

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 211 gctcccggaagtcgtcctccatgagcaccaag 242
           |||||||||| || ||||||||||||||||||
Sbjct: 787 gctcccggaaatcatcctccatgagcaccaag 756

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 178     cttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 237
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233

                    
Query: 238     ccaag 242
               |||||
Sbjct: 9412232 ccaag 9412228

>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 178    cttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 237
              ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633

                   
Query: 238    ccaag 242
              |||||
Sbjct: 109632 ccaag 109628

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 178     cttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 237
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354

                    
Query: 238     ccaag 242
               |||||
Sbjct: 9410353 ccaag 9410349

>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
            insert sequence
          Length = 1811

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 178  cttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 237
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483

                 
Query: 238  ccaag 242
            |||||
Sbjct: 1482 ccaag 1478

>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full
           insert sequence
          Length = 472

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 178 cttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 237
           ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148

                
Query: 238 ccaag 242
           |||||
Sbjct: 147 ccaag 143

>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
            insert sequence
          Length = 1411

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 178  cttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 237
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094

                 
Query: 238  ccaag 242
            |||||
Sbjct: 1093 ccaag 1089

>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic
            acid decarboxylase, complete cds
          Length = 1053

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 179  ttaggccttggncttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 238
            |||||||| |  |||||||||||||   |  ||||||||||| || || |||||||||||
Sbjct: 1053 ttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagcac 994

                
Query: 239  caag 242
            ||||
Sbjct: 993  caag 990

>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
              sequence
          Length = 231197

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    tatgagtatgctctggcaaa 145
              ||||||||||||||||||||
Sbjct: 208325 tatgagtatgctctggcaaa 208306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 902,167
Number of Sequences: 3902068
Number of extensions: 902167
Number of successful extensions: 13353
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13318
Number of HSP's gapped (non-prelim): 28
length of query: 242
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 220
effective length of database: 17,147,199,772
effective search space: 3772383949840
effective search space used: 3772383949840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)