ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12i24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 428 bits (216), Expect = e-117 Identities = 374/427 (87%) Strand = Plus / Minus Query: 182 atcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcct 241 ||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| |||| Sbjct: 9420367 atcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcct 9420308 Query: 242 taatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttgc 301 | |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| | Sbjct: 9420307 tgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgttac 9420248 Query: 302 ttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaagt 361 |||||||||||||||||||||||||||| || || || |||||||||||||||||||||| Sbjct: 9420247 ttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaagt 9420188 Query: 362 ccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggt 421 | ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| | Sbjct: 9420187 cggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccaggat 9420128 Query: 422 tggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaaga 481 ||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| | Sbjct: 9420127 tggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaaa 9420068 Query: 482 gttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctattt 541 | ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| | Sbjct: 9420067 gctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatct 9420008 Query: 542 ttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatnctgactctaagag 601 ||||||||||||| || || ||||| | ||||||||||||||||| ||||||| ||| | Sbjct: 9420007 ttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagcg 9419948 Query: 602 tacagac 608 ||||||| Sbjct: 9419947 tacagac 9419941
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 428 bits (216), Expect = e-117 Identities = 374/427 (87%) Strand = Plus / Minus Query: 182 atcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcct 241 ||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| |||| Sbjct: 117767 atcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcct 117708 Query: 242 taatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttgc 301 | |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| | Sbjct: 117707 tgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgttac 117648 Query: 302 ttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaagt 361 |||||||||||||||||||||||||||| || || || |||||||||||||||||||||| Sbjct: 117647 ttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaagt 117588 Query: 362 ccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggt 421 | ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| | Sbjct: 117587 cggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccaggat 117528 Query: 422 tggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaaga 481 ||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| | Sbjct: 117527 tggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaaa 117468 Query: 482 gttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctattt 541 | ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| | Sbjct: 117467 gctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatct 117408 Query: 542 ttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatnctgactctaagag 601 ||||||||||||| || || ||||| | ||||||||||||||||| ||||||| ||| | Sbjct: 117407 ttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagcg 117348 Query: 602 tacagac 608 ||||||| Sbjct: 117347 tacagac 117341
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 428 bits (216), Expect = e-117 Identities = 374/427 (87%) Strand = Plus / Minus Query: 182 atcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcct 241 ||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| |||| Sbjct: 9418488 atcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcct 9418429 Query: 242 taatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttgc 301 | |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| | Sbjct: 9418428 tgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgttac 9418369 Query: 302 ttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaagt 361 |||||||||||||||||||||||||||| || || || |||||||||||||||||||||| Sbjct: 9418368 ttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaagt 9418309 Query: 362 ccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggt 421 | ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| | Sbjct: 9418308 cggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccaggat 9418249 Query: 422 tggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaaga 481 ||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| | Sbjct: 9418248 tggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaaa 9418189 Query: 482 gttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctattt 541 | ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| | Sbjct: 9418188 gctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatct 9418129 Query: 542 ttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatnctgactctaagag 601 ||||||||||||| || || ||||| | ||||||||||||||||| ||||||| ||| | Sbjct: 9418128 ttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagcg 9418069 Query: 602 tacagac 608 ||||||| Sbjct: 9418068 tacagac 9418062
>dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E05, full insert sequence Length = 2499 Score = 420 bits (212), Expect = e-114 Identities = 373/427 (87%) Strand = Plus / Minus Query: 182 atcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcct 241 ||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| |||| Sbjct: 2187 atcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcct 2128 Query: 242 taatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttgc 301 | |||||||||||||| |||||||| ||||||| ||| || || |||||||||||||| | Sbjct: 2127 tgatggacagtagctcggggaactcggacttcaacttcgatgcatccatttcgttgttac 2068 Query: 302 ttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaagt 361 |||||||||||||||||||||||||||| || || || |||||||||||||||||||||| Sbjct: 2067 ttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaagt 2008 Query: 362 ccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggt 421 | ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| | Sbjct: 2007 cggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccaggat 1948 Query: 422 tggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaaga 481 ||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| | Sbjct: 1947 tggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaaa 1888 Query: 482 gttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctattt 541 | ||||| ||||||||||||||||| || ||| | |||||||||||||| || ||||| | Sbjct: 1887 gctcatccaaaattgtcatactgttggggatgattaccaccttgtcataacgagctatct 1828 Query: 542 ttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatnctgactctaagag 601 ||||||||||||| || || ||||| | ||||||||||||||||| ||||||| ||| | Sbjct: 1827 ttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagcg 1768 Query: 602 tacagac 608 ||||||| Sbjct: 1767 tacagac 1761
>dbj|AK064303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B05, full insert sequence Length = 1892 Score = 420 bits (212), Expect = e-114 Identities = 373/427 (87%) Strand = Plus / Minus Query: 182 atcttcaattagtagaaaccttcctgtttggctcaaagacattcttgatcaaagattcct 241 ||||||| |||| || ||||||||||||||||||||| |||| ||| | |||||| |||| Sbjct: 1578 atcttcagttagcaggaaccttcctgtttggctcaaaaacatacttaaccaaagaatcct 1519 Query: 242 taatggacagtagctcagggaactctgacttcagctttgacgcgtccatttcgttgttgc 301 | |||||||||| ||| |||||||| ||||||| ||| || || |||||||||||||| | Sbjct: 1518 tgatggacagtaactcggggaactcggacttcaacttcgatgcatccatttcgttgttac 1459 Query: 302 ttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttggtccacttgaagt 361 |||||||||||||||||||||||||||| || || || |||||||||||||||||||||| Sbjct: 1458 ttcttggtgcaactataaccttggcctgttcctcaagagtgaagttggtccacttgaagt 1399 Query: 362 ccgggttgatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggt 421 | ||||||| ||||| ||||||||||||||| |||||||| || |||||||||||||| | Sbjct: 1398 cggggttgaggtatttcttgtacatctccaggatctcgttgtggctgacaaccccaggat 1339 Query: 422 tggtgaaattccatatgcccctacaatcccgctttgccatctctacagagataggcaaga 481 ||||||| |||||||||||||| || |||||||| |||||||| | ||||| ||||| | Sbjct: 1338 tggtgaagttccatatgcccctgcagtcccgcttcgccatctcaatggagatgggcaaaa 1279 Query: 482 gttcatctaaaattgtcatactgttaggaatgttcaccaccttgtcatagcgggctattt 541 | ||||| ||||||||||||||||| || ||||| |||||||||||||| || ||||| | Sbjct: 1278 gctcatccaaaattgtcatactgttggggatgtttaccaccttgtcataacgagctatct 1219 Query: 542 ttgtgatgaagttccgaggattgcttaggtctgatgatatgggcatnctgactctaagag 601 ||||||||||||| || || ||||| | ||||||||||||||||| ||||||| ||| | Sbjct: 1218 ttgtgatgaagttacgggggttgctcaaatctgatgatatgggcatcctgactcgaagcg 1159 Query: 602 tacagac 608 ||||||| Sbjct: 1158 tacagac 1152
>gb|BT018879.1| Zea mays clone EL01T0203E01.d mRNA sequence Length = 2108 Score = 391 bits (197), Expect = e-105 Identities = 361/416 (86%) Strand = Plus / Minus Query: 198 aaccttcctgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctc 257 |||||||||||| ||||||||||| | |||||||||||| ||||| |||||||| |||| Sbjct: 1923 aaccttcctgttgggctcaaagacgtacttgatcaaagaatccttgatggacagcagctg 1864 Query: 258 agggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactat 317 ||||||||| | |||||| || |||| |||||| |||||||||||||| || || ||||| Sbjct: 1863 agggaactcggccttcagtttcgacgtgtccatctcgttgttgcttctaggcgcgactat 1804 Query: 318 aaccttggcctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattc 377 ||||||||||| |||||||| ||||| |||||||||||||| || || |||||||||| Sbjct: 1803 caccttggcctgttcttcgagtgtgaaattggtccacttgaaatcaggattgatgtattt 1744 Query: 378 cttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaattccatat 437 |||||||||||| ||||||||||| || || ||| | |||||||||||||| |||||||| Sbjct: 1743 cttgtacatctctagaatctcgttgtggcttacagcgccagggttggtgaagttccatat 1684 Query: 438 gcccctacaatcccgctttgccatctctacagagataggcaagagttcatctaaaattgt 497 |||||| || ||||| || |||||||| | |||||||||| || ||||| || ||||| Sbjct: 1683 gcccctgcagtcccgtttcgccatctcaatggagataggcagaagctcatccaagattgt 1624 Query: 498 catactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccg 557 ||| ||||| |||||||||||||||||||| || || ||||| |||||||||||||| || Sbjct: 1623 catgctgttgggaatgttcaccaccttgtcgtaacgagctatctttgtgatgaagttacg 1564 Query: 558 aggattgcttaggtctgatgatatgggcatnctgactctaagagtacagacattat 613 ||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 1563 agggttgcttagatctgatgatataggcatcctgaccctaagagtacagacattat 1508
>gb|BT018012.1| Zea mays clone EL01N0528B06.c mRNA sequence Length = 1008 Score = 391 bits (197), Expect = e-105 Identities = 361/416 (86%) Strand = Plus / Minus Query: 198 aaccttcctgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctc 257 |||||||||||| ||||||||||| | |||||||||||| ||||| |||||||| |||| Sbjct: 609 aaccttcctgttgggctcaaagacgtacttgatcaaagaatccttgatggacagcagctg 550 Query: 258 agggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactat 317 ||||||||| | |||||| || |||| |||||| |||||||||||||| || || ||||| Sbjct: 549 agggaactcggccttcagtttcgacgtgtccatctcgttgttgcttctaggcgcgactat 490 Query: 318 aaccttggcctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattc 377 ||||||||||| |||||||| ||||| |||||||||||||| || || |||||||||| Sbjct: 489 caccttggcctgttcttcgagtgtgaaattggtccacttgaaatcaggattgatgtattt 430 Query: 378 cttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaattccatat 437 |||||||||||| ||||||||||| || || ||| | |||||||||||||| |||||||| Sbjct: 429 cttgtacatctctagaatctcgttgtggcttacagcgccagggttggtgaagttccatat 370 Query: 438 gcccctacaatcccgctttgccatctctacagagataggcaagagttcatctaaaattgt 497 |||||| || ||||| || |||||||| | |||||||||| || ||||| || ||||| Sbjct: 369 gcccctgcagtcccgtttcgccatctcaatggagataggcagaagctcatccaagattgt 310 Query: 498 catactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccg 557 ||| ||||| |||||||||||||||||||| || || ||||| |||||||||||||| || Sbjct: 309 catgctgttgggaatgttcaccaccttgtcgtaacgagctatctttgtgatgaagttacg 250 Query: 558 aggattgcttaggtctgatgatatgggcatnctgactctaagagtacagacattat 613 ||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 249 agggttgcttagatctgatgatataggcatcctgaccctaagagtacagacattat 194
>gb|AY103981.1| Zea mays PCO118173 mRNA sequence Length = 1418 Score = 375 bits (189), Expect = e-100 Identities = 359/416 (86%) Strand = Plus / Minus Query: 198 aaccttcctgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctc 257 |||||||||||| ||||||||||||| ||||||||||| ||||| ||||||| || | Sbjct: 1189 aaccttcctgttaggctcaaagacatatttgatcaaagaatccttgatggacatcagttg 1130 Query: 258 agggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactat 317 || |||||| | ||||| || ||||| ||||| || ||||||||||| ||||| ||||| Sbjct: 1129 agagaactcggccttcaatttcgacgcatccatctcattgttgcttctaggtgcgactat 1070 Query: 318 aaccttggcctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattc 377 ||||||| ||||||||||| ||||||||||||||||| || || || |||||||||| Sbjct: 1069 gaccttggattgctcttcgagtgtgaagttggtccacttaaaatcaggattgatgtattt 1010 Query: 378 cttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaattccatat 437 ||||||||||||||||||||| || || |||||||| |||||||||||||| |||||||| Sbjct: 1009 cttgtacatctccagaatctcattgtggctgacaacgccagggttggtgaagttccatat 950 Query: 438 gcccctacaatcccgctttgccatctctacagagataggcaagagttcatctaaaattgt 497 |||||| || ||||| ||||||||||| | ||||| |||| || ||||| |||||||| Sbjct: 949 gcccctgcagtcccgttttgccatctcaatggagatgggcagaagctcatccaaaattgt 890 Query: 498 catactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccg 557 ||| ||||| |||||||||||||||||||| || || ||||| |||||||||||||| || Sbjct: 889 catgctgttgggaatgttcaccaccttgtcgtaacgagctatctttgtgatgaagttacg 830 Query: 558 aggattgcttaggtctgatgatatgggcatnctgactctaagagtacagacattat 613 ||||||| |||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 829 aggattgtttagatctgatgatataggcatcctgaccctaagagtacagacattat 774
>gb|AY108467.1| Zea mays PCO142331 mRNA sequence Length = 1381 Score = 161 bits (81), Expect = 3e-36 Identities = 312/389 (80%) Strand = Plus / Minus Query: 199 accttcctgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctca 258 ||||| ||||| ||||||||||| | ||||||||| || ||||| || ||||| ||||| Sbjct: 1164 acctttctgttgggctcaaagacgtacttgatcaacgagtccttgatcgacagcagctcg 1105 Query: 259 gggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactata 318 |||||||| ||||||||| | |||||||| ||||||||||||| || ||||| || Sbjct: 1104 gggaactcgttcttcagcttggttgcgtccatctcgttgttgcttcgcggagcaacgatg 1045 Query: 319 accttggcctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattcc 378 ||||| |||||||| ||||| |||||||| |||||||||||| |||| |||||| | | Sbjct: 1044 accttcgcctgctcctcgagggtgaagtttgtccacttgaagctagggtcgatgtactgc 985 Query: 379 ttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaattccatatg 438 ||||||||||| || |||||||| || ||||| || || ||||||||||| || | ||| Sbjct: 984 ttgtacatctctaggatctcgttgtggctgacgacgccggggttggtgaagttatagatg 925 Query: 439 cccctacaatcccgctttgccatctctacagagataggcaagagttcatctaaaattgtc 498 |||| | || ||| |||||||| || ||||| |||| |||||| || || || ||| Sbjct: 924 ccccgcaggttcctcttcgccatctccactgagatgggcaggagttcgtccaatatcgtc 865 Query: 499 atactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccga 558 || ||||| || |||||||||||||||| || ||| || ||||| | ||||||||| Sbjct: 864 atgctgttggggatgttcaccaccttgttgtaacggctgatctttgtcacgaagttccgc 805 Query: 559 ggattgcttaggtctgatgatatgggcat 587 || ||||| ||||| || ||||| ||||| Sbjct: 804 gggttgctgaggtcagaggatatcggcat 776
>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence Length = 75970 Score = 135 bits (68), Expect = 2e-28 Identities = 304/383 (79%) Strand = Plus / Minus Query: 214 tcaaagacattcttgatcaaagattccttaatggacagtagctcagggaactctgacttc 273 |||||||||| |||||| || || || || || | ||| | |||||||||||| |||| Sbjct: 28799 tcaaagacatacttgattaatgactctttgattggcagcaactcagggaactcgttcttc 28740 Query: 274 agctttgacgcgtccatttcgttgttgcttcttggtgcaactataaccttggcctgctct 333 ||||| ||||| ||||| || |||||||| | || |||||||| |||||||| ||||| Sbjct: 28739 agcttggacgcatccatctcattgttgctccggggggcaactatcaccttggcttgctcc 28680 Query: 334 tcgagcgtgaagttggtccacttgaagtccgggttgatgtattccttgtacatctccaga 393 || || ||||| ||| | ||||||||||| ||||| | |||||||||||||| | Sbjct: 28679 tctaggtcaaagttaacccatgtaaagtccgggttaatgtagttcttgtacatctccaaa 28620 Query: 394 atctcgttatgactgacaaccccagggttggtgaaattccatatgcccctacaatcccgc 453 ||||| ||||| || ||||| |||||||| ||||| ||||||||||| || | | || | Sbjct: 28619 atctcattatggctcacaacaccagggtttgtgaagttccatatgcctctcaagttcctc 28560 Query: 454 tttgccatctctacagagataggcaagagttcatctaaaattgtcatactgttaggaatg 513 ||||||||||| | || ||||| | ||||| || | || ||||| ||||| |||||| Sbjct: 28559 tttgccatctcaattgaaataggtagaagttcgtccaggatagtcatgctgtttggaatg 28500 Query: 514 ttcaccaccttgtcatagcgggctatttttgtgatgaagttccgaggattgcttaggtct 573 ||||||||||| | |||||| | || ||||| |||||||| || || ||| |||||||| Sbjct: 28499 ttcaccaccttattatagcgagaaatctttgtaatgaagttgcgtgggttgtttaggtct 28440 Query: 574 gatgatatgggcatnctgactct 596 |||||||| ||||| || ||||| Sbjct: 28439 gatgatattggcattctaactct 28417
>ref|NM_106505.3| Arabidopsis thaliana ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); transferase, transferring glycosyl groups AT1G78580 (ATTPS1) mRNA, complete cds Length = 4635 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Plus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 3236 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 3295 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 3296 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 3355 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 3356 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 3415 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 3416 accacacctgggtttgtgaagttcca 3441
>ref|NM_106504.2| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.1 mRNA, complete cds Length = 2744 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2151 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2092 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2091 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2032 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2031 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1972 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 1971 accacacctgggtttgtgaagttcca 1946
>ref|NM_001036220.1| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.2 mRNA, complete cds Length = 2912 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2285 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2226 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2225 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2166 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2165 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 2106 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 2105 accacacctgggtttgtgaagttcca 2080
>gb|BT014616.1| Lycopersicon esculentum clone 134102R, mRNA sequence Length = 2345 Score = 83.8 bits (42), Expect = 6e-13 Identities = 297/382 (77%) Strand = Plus / Minus Query: 206 tgtttggctcaaagacattcttgatcaaagattccttaatggacagtagctcagggaact 265 ||||||| ||||| || | |||||||| || || ||||| || || | ||| ||||||| Sbjct: 2123 tgtttggttcaaaaacgtacttgatcagcgactctttaattgatagcaactcggggaact 2064 Query: 266 ctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgcaactataaccttgg 325 || ||||| |||||| || ||||| || ||||| || | | |||||| || ||||||| Sbjct: 2063 ctttcttcaactttgatgcatccatctcattgttactgcgagctgcaacgattaccttgg 2004 Query: 326 cctgctcttcgagcgtgaagttggtccacttgaagtccgggttgatgtattccttgtaca 385 |||||||||| | ||||||||||| | | || | || | ||| |||| |||||||| Sbjct: 2003 cctgctcttccaccgtgaagttggcataagtaaatgctggatcgatatatttcttgtaca 1944 Query: 386 tctccagaatctcgttatgactgacaaccccagggttggtgaaattccatatgcccctac 445 | |||| ||||| ||||| || ||||| || ||||| ||||||||||||||||| || Sbjct: 1943 tttccaatatctcattatggctcacaacacccgggtttgtgaaattccatatgcctctga 1884 Query: 446 aatcccgctttgccatctctacagagataggcaagagttcatctaaaattgtcatactgt 505 || |||||||||||||| | || ||||| | || ||||| || || |||||||||| Sbjct: 1883 gattacgctttgccatctcaattgaaataggaagaagctcatccaatatggtcatactgt 1824 Query: 506 taggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttccgaggattgc 565 ||||||| || |||||||| | ||||||| || || || ||||| || ||||| |||| Sbjct: 1823 taggaatattgaccaccttattatagcggctgatcttggtaatgaaattgcgagggttgc 1764 Query: 566 ttaggtctgatgatatgggcat 587 | || ||||| ||||| ||||| Sbjct: 1763 tgagatctgaagatattggcat 1742
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Plus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 38575 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 38634 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 38635 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 38694 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 38695 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 38754 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 38755 accacacctgggtttgtgaagttcca 38780
>gb|AY081471.1| Arabidopsis thaliana similar to dTDP-D-glucose 4,6-dehydratase (At1g78570) mRNA, complete cds Length = 2126 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 1976 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 1917 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 1916 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 1857 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 1856 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1797 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 1796 accacacctgggtttgtgaagttcca 1771
>gb|AY042833.1| Arabidopsis thaliana Similar to dTDP-D-glucose 4,6-dehydratase (T30F21.10) mRNA, complete cds Length = 2347 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2151 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2092 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2091 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2032 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2031 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1972 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 1971 accacacctgggtttgtgaagttcca 1946
>emb|BX815784.1|CNS0AAK8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2309 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 229 atcaaagattccttaatggacagtagctcagggaactctgacttcagctttgacgcgtcc 288 |||| ||| ||||| || || |||||||||||||||||| ||| ||||| || || ||| Sbjct: 2152 atcagagactccttgatagagagtagctcagggaactctttcttgagcttggaagcatcc 2093 Query: 289 atttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaagttg 348 || ||||||||||||||||| || || || || || || ||||| || | |||||||| Sbjct: 2092 atctcgttgttgcttcttggagccacaatgactttagcttgctcctctaatgtgaagttt 2033 Query: 349 gtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatgactg 408 | ||| ||||| || ||||||||||| || |||||||||| || |||||||| || || Sbjct: 2032 gcccatttgaattcagggttgatgtagtctctgtacatctctaggatctcgttgtggctc 1973 Query: 409 acaaccccagggttggtgaaattcca 434 || || || ||||| ||||| ||||| Sbjct: 1972 accacacctgggtttgtgaagttcca 1947
>ref|NM_104228.3| Arabidopsis thaliana MUM4 (MUCILAGE-MODIFIED 4); catalytic AT1G53500 (MUM4) mRNA, complete cds Length = 2526 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 2222 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 2163 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 2162 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 2103 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 2102 ctcaccacccctgggttggtgaaattccatatgcc 2068
>gb|AY328518.1| Arabidopsis thaliana putative UDP-L-rhamnose synthase MUM4 (MUM4) mRNA, complete cds Length = 2479 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 2223 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 2164 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 2163 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 2104 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 2103 ctcaccacccctgggttggtgaaattccatatgcc 2069
>emb|AJ565874.1|ATH565874 Arabidopsis thaliana mRNA for putative NDP-rhamnose synthase (rhm2 gene) Length = 2004 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 1913 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 1854 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 1853 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 1794 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 1793 ctcaccacccctgggttggtgaaattccatatgcc 1759
>gb|AY048277.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1739 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 1483 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 1424 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 1423 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 1364 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 1363 ctcaccacccctgggttggtgaaattccatatgcc 1329
>emb|BX817582.1|CNS0AEDB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 227 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 168 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 167 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 108 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 107 ctcaccacccctgggttggtgaaattccatatgcc 73
>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete sequence Length = 111936 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 104937 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 104878 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 104877 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 104818 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 104817 ctcaccacccctgggttggtgaaattccatatgcc 104783
>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 99960 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 63843 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 63784 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 63783 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 63724 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 63723 ctcaccacccctgggttggtgaaattccatatgcc 63689
>gb|BT002264.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1497 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||||||||||||||||| | ||||| || ||||| || || ||||| | |||||| Sbjct: 1406 tccatttcgttgttgcttcgagcagcaacaatgacctttgcttgttcttccactgtgaag 1347 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| || || | || | |||||| | |||||||||||||| |||||||| || Sbjct: 1346 ttggaccatttaaaacctggctcgatgtaattcttgtacatctccaatatctcgttgtgg 1287 Query: 406 ctgacaaccccagggttggtgaaattccatatgcc 440 || || ||||| ||||||||||||||||||||||| Sbjct: 1286 ctcaccacccctgggttggtgaaattccatatgcc 1252
>gb|AF359121.1| Pinus sylvestris isolate plus tree E635C putative dTDP-glucose 4,6-dehydratase gene, partial cds Length = 212 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 369 gatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaa 428 |||||| ||| ||||||||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 90 gatgtagtccctgtacatctccaggatctcgttgtggctaacaaccccagggttcgtgaa 31 Query: 429 attcca 434 |||||| Sbjct: 30 attcca 25
>ref|NM_112340.2| Arabidopsis thaliana RHM3; catalytic AT3G14790 (RHM3) mRNA, complete cds Length = 2332 Score = 73.8 bits (37), Expect = 6e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 2057 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 1998 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 1997 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 1938 Query: 406 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 465 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 1937 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 1878 Query: 466 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 525 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 1877 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 1818 Query: 526 t 526 | Sbjct: 1817 t 1817
>gb|AY142060.1| Arabidopsis thaliana At3g14790/T21E2_4 mRNA, complete cds Length = 1995 Score = 73.8 bits (37), Expect = 6e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 1904 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 1845 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 1844 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 1785 Query: 406 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 465 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 1784 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 1725 Query: 466 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 525 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 1724 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 1665 Query: 526 t 526 | Sbjct: 1664 t 1664
>gb|AY078958.1| Arabidopsis thaliana AT3g14790/T21E2_4 mRNA, complete cds Length = 2332 Score = 73.8 bits (37), Expect = 6e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 2057 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 1998 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 1997 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 1938 Query: 406 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 465 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 1937 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 1878 Query: 466 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 525 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 1877 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 1818 Query: 526 t 526 | Sbjct: 1817 t 1817
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 73.8 bits (37), Expect = 6e-10 Identities = 190/241 (78%) Strand = Plus / Minus Query: 286 tccatttcgttgttgcttcttggtgcaactataaccttggcctgctcttcgagcgtgaag 345 ||||| ||||||||||| | ||| ||||| || ||||| ||||| ||||| | ||||| Sbjct: 10282 tccatctcgttgttgctccgtggagcaacaatgaccttagcctgttcttccaaattgaag 10223 Query: 346 ttggtccacttgaagtccgggttgatgtattccttgtacatctccagaatctcgttatga 405 |||| ||| ||||| || || | |||||| |||||||||||| | |||||||| || Sbjct: 10222 ttggaccatttgaaatcaggctcgatgtaactcttgtacatctctaatatctcgttgtgg 10163 Query: 406 ctgacaaccccagggttggtgaaattccatatgcccctacaatcccgctttgccatctct 465 || || || || || |||||||| |||||||| ||||| | || ||| |||||||| Sbjct: 10162 ctcaccactcctggattggtgaagttccatattccccttaggttcctcttcgccatctcg 10103 Query: 466 acagagataggcaagagttcatctaaaattgtcatactgttaggaatgttcaccaccttg 525 | ||||| || ||||||||||||| || ||||| ||||| |||||||||||||| ||| Sbjct: 10102 atcgagattggtaagagttcatctagtatggtcatgctgtttggaatgttcaccactttg 10043 Query: 526 t 526 | Sbjct: 10042 t 10042
>gb|AF359122.1| Pinus sylvestris isolate plus tree E1101 putative dTDP-glucose 4,6-dehydratase gene, partial cds Length = 212 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 369 gatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaa 428 |||||| ||| ||||||||||||| ||||| || || || |||||||||||||| ||||| Sbjct: 90 gatgtagtccctgtacatctccaggatctcattgtggctaacaaccccagggttcgtgaa 31 Query: 429 attcca 434 |||||| Sbjct: 30 attcca 25
>gb|AF051236.1|AF051236 Picea mariana hypothetical protein (Sb50) mRNA, partial cds Length = 1139 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 369 gatgtattccttgtacatctccagaatctcgttatgactgacaaccccagggttggtgaa 428 |||||| ||| ||||||||||||| |||||||| || || || ||||||||||| ||||| Sbjct: 635 gatgtagtccctgtacatctccaggatctcgttgtggctaaccaccccagggttcgtgaa 576 Query: 429 attcca 434 |||||| Sbjct: 575 attcca 570 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Minus Query: 511 atgttcaccaccttgtcatagcgggctatttttgtgatgaagttccgagg 560 ||||| || |||||||||||||||| || || ||||||||||| ||||| Sbjct: 493 atgttgacgaccttgtcatagcgggagatcttggtgatgaagttgcgagg 444
>emb|AJ718258.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-23-450, cultivar Bright Yellow 2 Length = 373 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 253 agctcagggaactctgacttcagctttgacgcgtccatttcgttgttgcttcttggtgca 312 ||||||||||||||| ||||| |||||| || ||||| |||||||| || | | |||| Sbjct: 110 agctcagggaactctttcttcaactttgatgcatccatctcgttgttactgcgagctgca 51 Query: 313 actataaccttggcctgctcttcgagcgtgaagttgg 349 || || ||||||||||||||||| | |||||||||| Sbjct: 50 acaattaccttggcctgctcttccaatgtgaagttgg 14
>ref|XM_806362.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503925.40) partial mRNA Length = 954 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 496 gtcatactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttc 555 ||||||||||| || |||||||||||||| || ||| || ||||| |||||||||||| Sbjct: 605 gtcatactgttcgggatgttcaccaccttctcgtagttagcaattttggtgatgaagttc 546
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 517 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattg 564 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 27730906 accactttatcataccgggcgattttagtgatgaagttgcgaggattg 27730859 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 ttgcttcttggtgcaactataaccttggcctgctc 332 |||||||| ||||||||||| |||||||| ||||| Sbjct: 27731125 ttgcttctcggtgcaactatgaccttggcttgctc 27731091
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 517 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattg 564 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 16239 accactttatcataccgggcgattttagtgatgaagttgcgaggattg 16192 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 ttgcttcttggtgcaactataaccttggcctgctc 332 |||||||| ||||||||||| |||||||| ||||| Sbjct: 16458 ttgcttctcggtgcaactatgaccttggcttgctc 16424
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 517 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattg 564 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 116772 accactttatcataccgggcgattttagtgatgaagttgcgaggattg 116725 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 ttgcttcttggtgcaactataaccttggcctgctc 332 |||||||| ||||||||||| |||||||| ||||| Sbjct: 116991 ttgcttctcggtgcaactatgaccttggcttgctc 116957
>dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H09, full insert sequence Length = 1447 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 517 accaccttgtcatagcgggctatttttgtgatgaagttccgaggattg 564 ||||| || ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 719 accactttatcataccgggcgattttagtgatgaagttgcgaggattg 672 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 298 ttgcttcttggtgcaactataaccttggcctgctc 332 |||||||| ||||||||||| |||||||| ||||| Sbjct: 938 ttgcttctcggtgcaactatgaccttggcttgctc 904
>gb|AC183836.2| Pan troglodytes BAC clone CH251-131N24 from chromosome 8, complete sequence Length = 172056 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 85 tgcctgctgctataccacaatagaatt 111 |||||||||||| |||||||||||||| Sbjct: 44503 tgcctgctgctagaccacaatagaatt 44529
>gb|AC144698.1| Homo sapiens chromosome 8, clone XXfos-85140A10, complete sequence Length = 42427 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 85 tgcctgctgctataccacaatagaatt 111 |||||||||||| |||||||||||||| Sbjct: 11562 tgcctgctgctagaccacaatagaatt 11588
>gb|AC010785.8| Homo sapiens, clone RP11-6O24, complete sequence Length = 146665 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 85 tgcctgctgctataccacaatagaatt 111 |||||||||||| |||||||||||||| Sbjct: 119126 tgcctgctgctagaccacaatagaatt 119100
>ref|NM_003012.3| Homo sapiens secreted frizzled-related protein 1 (SFRP1), mRNA Length = 4465 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 atatattagctaattagaaata 154 |||||||||||||||||||||| Sbjct: 3144 atatattagctaattagaaata 3165
>gb|BC036503.1| Homo sapiens secreted frizzled-related protein 1, mRNA (cDNA clone MGC:43294 IMAGE:5265277), complete cds Length = 4482 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 atatattagctaattagaaata 154 |||||||||||||||||||||| Sbjct: 3160 atatattagctaattagaaata 3181
>gb|AC103846.2| Homo sapiens chromosome 8, clone RP11-645H17, complete sequence Length = 171133 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 atatattagctaattagaaata 154 |||||||||||||||||||||| Sbjct: 39586 atatattagctaattagaaata 39607
>dbj|AK127331.1| Homo sapiens cDNA FLJ45402 fis, clone BRHIP3029409, moderately similar to Homo sapiens secreted frizzled-related protein 1 (SFRP1) Length = 3872 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 atatattagctaattagaaata 154 |||||||||||||||||||||| Sbjct: 2566 atatattagctaattagaaata 2587
>gb|AC104393.6| Homo sapiens chromosome 8, clone CTD-3080F16, complete sequence Length = 188270 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 atatattagctaattagaaata 154 |||||||||||||||||||||| Sbjct: 47463 atatattagctaattagaaata 47484
>gb|AF056087.1|AF056087 Homo sapiens secreted frizzled related protein mRNA, complete cds Length = 4469 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 atatattagctaattagaaata 154 |||||||||||||||||||||| Sbjct: 3137 atatattagctaattagaaata 3158
>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a, complete sequence Length = 54726 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 205 ctgtttggctcaaagacattcttgat 230 |||||||| ||||||||||||||||| Sbjct: 7579 ctgtttgggtcaaagacattcttgat 7604
>gb|AC153799.1| Mus musculus BAC RP23-145M15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207598 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaatngtaaatatgtatgcctgct 92 |||| ||||||||||||||||||| Sbjct: 186647 aaattgtaaatatgtatgcctgct 186670
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatatattagctaattagaaa 152 ||||||||||||||||||||| Sbjct: 110344 aatatattagctaattagaaa 110324
>gb|AC131694.4| Mus musculus BAC clone RP23-393L24 from chromosome 6, complete sequence Length = 187925 Score = 42.1 bits (21), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaatngtaaatatgtatgcctgct 92 |||| ||||||||||||||||||| Sbjct: 37378 aaattgtaaatatgtatgcctgct 37401
>gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, complete sequence Length = 195404 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 caacatatccaccactacatagtaa 28 |||||| |||||||||||||||||| Sbjct: 157099 caacatttccaccactacatagtaa 157075
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatatattagctaattagaaa 152 ||||||||||||||||||||| Sbjct: 3232627 aatatattagctaattagaaa 3232607
>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198481 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcaaagacattcttgatcaaa 234 ||||||||||||||||||||| Sbjct: 152235 tcaaagacattcttgatcaaa 152255
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatatattagctaattagaaa 152 ||||||||||||||||||||| Sbjct: 26451 aatatattagctaattagaaa 26431
>ref|NM_104978.3| Arabidopsis thaliana NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE) AT1G63000 (NRS/ER) mRNA, complete cds Length = 1265 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 380 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 431 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 826 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 775
>ref|XM_640708.1| Dictyostelium discoideum hypothetical protein (DDB0216852), partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cttcttggtgcaactataac 320 |||||||||||||||||||| Sbjct: 53 cttcttggtgcaactataac 34
>ref|XM_628843.1| Dictyostelium discoideum hypothetical protein (DDB0215060), partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cttcttggtgcaactataac 320 |||||||||||||||||||| Sbjct: 53 cttcttggtgcaactataac 34
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cgttgttgcttcttggtgca 312 |||||||||||||||||||| Sbjct: 60791 cgttgttgcttcttggtgca 60810
>gb|AC010848.14| Drosophila melanogaster clone BACR20N11, complete sequence Length = 175978 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 taatgcgtaacaaaaaatngtaa 77 |||||||||||||||||| |||| Sbjct: 35175 taatgcgtaacaaaaaatcgtaa 35197 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 55 taatgcgtaacaaaaaatngtaa 77 |||||||||||||||||| |||| Sbjct: 10190 taatgcgtaacaaaaaatcgtaa 10168
>gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete sequence Length = 166908 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 taatgcgtaacaaaaaatngtaa 77 |||||||||||||||||| |||| Sbjct: 150545 taatgcgtaacaaaaaatcgtaa 150567 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 55 taatgcgtaacaaaaaatngtaa 77 |||||||||||||||||| |||| Sbjct: 125560 taatgcgtaacaaaaaatcgtaa 125538
>gb|AY513232.1| Arabidopsis thaliana 3,5-epimerase/4-reductase (NRS/ER) mRNA, complete cds Length = 906 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 380 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 431 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 709 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 658
>ref|XM_803926.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510349.10) partial mRNA Length = 954 Score = 40.1 bits (20), Expect = 8.4 Identities = 50/60 (83%) Strand = Plus / Minus Query: 496 gtcatactgttaggaatgttcaccaccttgtcatagcgggctatttttgtgatgaagttc 555 ||||||||||| || || |||||||||| || ||| ||| ||||| |||||||||||| Sbjct: 605 gtcatactgttcgggatactcaccaccttctcgtagttggcaattttggtgatgaagttc 546
>gb|AC102933.6| Mus musculus chromosome 8, clone RP24-211I18, complete sequence Length = 172489 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tataccacaatagaattggc 114 |||||||||||||||||||| Sbjct: 30512 tataccacaatagaattggc 30493
>emb|BX842568.3| Human DNA sequence from clone RP11-31H15 on chromosome X Contains the gene for a novel protein, a transmembrane 4 superfamily member 10 (TM4SF10) pseudogene, a transcription factor Dp-1 (TFDP1) pseudogene, a novel pseudogene and two ferritin, heavy polypeptide-like 17 (FTHL17) pseudogenes, complete sequence Length = 161540 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 gcctgctgctataccacaatagaa 109 |||||||||||||||||| ||||| Sbjct: 112278 gcctgctgctataccacagtagaa 112301
>ref|NM_001017247.2| Xenopus tropicalis kinesin 2 60/70kDa (kns2), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctataccacaatagaattgg 113 |||||||||||||||||||| Sbjct: 1642 ctataccacaatagaattgg 1623
>emb|AL732490.10| Mouse DNA sequence from clone RP23-17C2 on chromosome 11 Contains part of a novel gene, the Phb gene for prohibitin and the 3' end of a novel gene, complete sequence Length = 84919 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 ccgctttgccatctctacag 469 |||||||||||||||||||| Sbjct: 42988 ccgctttgccatctctacag 43007
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ttccttgtacatctccagaa 394 |||||||||||||||||||| Sbjct: 2650294 ttccttgtacatctccagaa 2650313
>gb|AF332445.1| Arabidopsis thaliana clone C00141 (e) unknown protein (At1g63000) mRNA, complete cds Length = 906 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 380 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 431 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 709 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 658
>gb|AF387005.1|AF387005 Arabidopsis thaliana Unknown protein (F16P17.17) mRNA, complete cds Length = 1230 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 380 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 431 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 786 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 735
>emb|BX815284.1|CNS0AAH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS49ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1224 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 380 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 431 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 826 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 775
>gb|AC087879.8| Homo sapiens 12q BAC RP11-166B14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 atattagctaattagaaata 154 |||||||||||||||||||| Sbjct: 103070 atattagctaattagaaata 103089
>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 98412 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Minus Query: 380 tgtacatctccagaatctcgttatgactgacaaccccagggttggtgaaatt 431 |||||||||||| |||||||| || || ||||| || ||||| |||||||| Sbjct: 70029 tgtacatctccaagatctcgttgtggctcacaacacccgggttagtgaaatt 69978
>dbj|AB020755.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZN1 Length = 81672 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttgatcaaagattccttaat 245 |||||||||||||||||||| Sbjct: 72157 ttgatcaaagattccttaat 72176
>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the complete sequence Length = 283558 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 taatgcgtaacaaaaaatngtaa 77 |||||||||||||||||| |||| Sbjct: 246777 taatgcgtaacaaaaaatcgtaa 246799 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 55 taatgcgtaacaaaaaatngtaa 77 |||||||||||||||||| |||| Sbjct: 221792 taatgcgtaacaaaaaatcgtaa 221770
>emb|CR760139.2| Xenopus tropicalis finished cDNA, clone TNeu076h23 Length = 1846 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctataccacaatagaattgg 113 |||||||||||||||||||| Sbjct: 1642 ctataccacaatagaattgg 1623
>emb|AL929059.5| Mouse DNA sequence from clone RP23-437L13 on chromosome 2, complete sequence Length = 107108 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gttgttgcttcttggtgcaa 313 |||||||||||||||||||| Sbjct: 41238 gttgttgcttcttggtgcaa 41257 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,765,902 Number of Sequences: 3902068 Number of extensions: 4765902 Number of successful extensions: 79908 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79672 Number of HSP's gapped (non-prelim): 223 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
