>ref|XM_466811.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2403

 Score =  137 bits (69), Expect = 4e-29
 Identities = 149/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                        
Query: 295  ttatttcctncggtctgcactaattgtaaggcgctcaaatgtccttagagtgggatcatc 354
            ||||||||| | ||| ||||| |||| |||||| ||||| ||||| | ||||||||||||
Sbjct: 1908 ttatttccttctgtcagcactgattgaaaggcgttcaaaggtcctcaaagtgggatcatc 1849

                                                                        
Query: 355  atggatatttcttgcagttttcgacagcgacgaggacctggcctcnagtccagttgattg 414
            ||||| ||||||||||||||| |  ||   ||||||||||| ||| ||||| ||||| ||
Sbjct: 1848 atggacatttcttgcagttttggtaag---cgaggacctggtctcaagtcctgttgactg 1792

                                                                    
Query: 415  gtgaagcctntgagtggttgatggacgactgctgccactactggttgggattaggt 470
            ||||||||| ||  | |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1791 gtgaagcctctgcatagttgatgggcgactgctgccactgctggttggaattaggt 1736

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 4e-29
 Identities = 149/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                            
Query: 295      ttatttcctncggtctgcactaattgtaaggcgctcaaatgtccttagagtgggatcatc 354
                ||||||||| | ||| ||||| |||| |||||| ||||| ||||| | ||||||||||||
Sbjct: 24791648 ttatttccttctgtcagcactgattgaaaggcgttcaaaggtcctcaaagtgggatcatc 24791589

                                                                            
Query: 355      atggatatttcttgcagttttcgacagcgacgaggacctggcctcnagtccagttgattg 414
                ||||| ||||||||||||||| |  ||   ||||||||||| ||| ||||| ||||| ||
Sbjct: 24791588 atggacatttcttgcagttttggtaag---cgaggacctggtctcaagtcctgttgactg 24791532

                                                                        
Query: 415      gtgaagcctntgagtggttgatggacgactgctgccactactggttgggattaggt 470
                ||||||||| ||  | |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 24791531 gtgaagcctctgcatagttgatgggcgactgctgccactgctggttggaattaggt 24791476



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 284      tcttcaaacttttatttcct 303
                ||||||||||||||||||||
Sbjct: 23984369 tcttcaaacttttatttcct 23984350

>emb|AJ487966.1|OSA487966 Oryza sativa (japonica cultivar-group) partial mRNA for putative
            casein kinase I
          Length = 1939

 Score =  137 bits (69), Expect = 4e-29
 Identities = 149/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                        
Query: 295  ttatttcctncggtctgcactaattgtaaggcgctcaaatgtccttagagtgggatcatc 354
            ||||||||| | ||| ||||| |||| |||||| ||||| ||||| | ||||||||||||
Sbjct: 1392 ttatttccttctgtcagcactgattgaaaggcgttcaaaggtcctcaaagtgggatcatc 1333

                                                                        
Query: 355  atggatatttcttgcagttttcgacagcgacgaggacctggcctcnagtccagttgattg 414
            ||||| ||||||||||||||| |  ||   ||||||||||| ||| ||||| ||||| ||
Sbjct: 1332 atggacatttcttgcagttttggtaag---cgaggacctggtctcaagtcctgttgactg 1276

                                                                    
Query: 415  gtgaagcctntgagtggttgatggacgactgctgccactactggttgggattaggt 470
            ||||||||| ||  | |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1275 gtgaagcctctgcatagttgatgggcgactgctgccactgctggttggaattaggt 1220

>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score =  137 bits (69), Expect = 4e-29
 Identities = 149/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                         
Query: 295   ttatttcctncggtctgcactaattgtaaggcgctcaaatgtccttagagtgggatcatc 354
             ||||||||| | ||| ||||| |||| |||||| ||||| ||||| | ||||||||||||
Sbjct: 91296 ttatttccttctgtcagcactgattgaaaggcgttcaaaggtcctcaaagtgggatcatc 91237

                                                                         
Query: 355   atggatatttcttgcagttttcgacagcgacgaggacctggcctcnagtccagttgattg 414
             ||||| ||||||||||||||| |  ||   ||||||||||| ||| ||||| ||||| ||
Sbjct: 91236 atggacatttcttgcagttttggtaag---cgaggacctggtctcaagtcctgttgactg 91180

                                                                     
Query: 415   gtgaagcctntgagtggttgatggacgactgctgccactactggttgggattaggt 470
             ||||||||| ||  | |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 91179 gtgaagcctctgcatagttgatgggcgactgctgccactgctggttggaattaggt 91124

>dbj|AK101388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036G08, full
            insert sequence
          Length = 2403

 Score =  137 bits (69), Expect = 4e-29
 Identities = 149/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                        
Query: 295  ttatttcctncggtctgcactaattgtaaggcgctcaaatgtccttagagtgggatcatc 354
            ||||||||| | ||| ||||| |||| |||||| ||||| ||||| | ||||||||||||
Sbjct: 1908 ttatttccttctgtcagcactgattgaaaggcgttcaaaggtcctcaaagtgggatcatc 1849

                                                                        
Query: 355  atggatatttcttgcagttttcgacagcgacgaggacctggcctcnagtccagttgattg 414
            ||||| ||||||||||||||| |  ||   ||||||||||| ||| ||||| ||||| ||
Sbjct: 1848 atggacatttcttgcagttttggtaag---cgaggacctggtctcaagtcctgttgactg 1792

                                                                    
Query: 415  gtgaagcctntgagtggttgatggacgactgctgccactactggttgggattaggt 470
            ||||||||| ||  | |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 1791 gtgaagcctctgcatagttgatgggcgactgctgccactgctggttggaattaggt 1736

>gb|AY112029.1| Zea mays CL14517_1 mRNA sequence
          Length = 679

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 383 gacgaggacctggcctcnagtccagttgattggtgaagcctntgagtggttgatggacga 442
           ||||||| |||| |||| ||||||||||| ||||||||||| ||| ||||||||||||| 
Sbjct: 441 gacgaggtcctgccctcaagtccagttgactggtgaagcctttgattggttgatggacgg 500

                  
Query: 443 ctgctgc 449
           |||||||
Sbjct: 501 ctgctgc 507

>gb|AY108823.1| Zea mays PCO086435 mRNA sequence
          Length = 588

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 391 cctggcctcnagtccagttgattggtgaagcctntgagtggttgatggacgactgctgc 449
           |||| |||| ||||||||||| ||||||||||| ||| |||| |||||||| |||||||
Sbjct: 173 cctgccctcaagtccagttgagtggtgaagcctttgattggtcgatggacggctgctgc 115

>emb|BX664627.16| Zebrafish DNA sequence from clone DKEYP-55D11 in linkage group 6,
             complete sequence
          Length = 206408

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 81    ttttctttagccattcaaaagta 103
             |||||||||||||||||||||||
Sbjct: 78106 ttttctttagccattcaaaagta 78084

>emb|BX649406.10| Zebrafish DNA sequence from clone CH211-203N20 in linkage group 4
             Contains two CpG islands, complete sequence
          Length = 141237

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 81    ttttctttagccattcaaaagt 102
             ||||||||||||||||||||||
Sbjct: 56049 ttttctttagccattcaaaagt 56028

>emb|Z83856.2|HSN113A11 Human DNA sequence from clone LL22NC03-113A11 on chromosome 22
            Contains the 3' end of the DEPDC5 gene for DEP domain
            containing 5, complete sequence
          Length = 22634

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 280  ttactcttcaaacttttattt 300
            |||||||||||||||||||||
Sbjct: 2238 ttactcttcaaacttttattt 2258

>gb|AC156581.4| Pan troglodytes BAC clone CH251-372H22 from chromosome unknown,
            complete sequence
          Length = 188418

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 280  ttactcttcaaacttttattt 300
            |||||||||||||||||||||
Sbjct: 1320 ttactcttcaaacttttattt 1300

>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence
          Length = 195530

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   atcttgctgaccagtgagca 222
             ||||||||||||||||||||
Sbjct: 78621 atcttgctgaccagtgagca 78640

>emb|CR385066.13| Zebrafish DNA sequence from clone DKEY-220L23 in linkage group 3,
              complete sequence
          Length = 238822

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     ttttctttagccattcaaaa 100
              ||||||||||||||||||||
Sbjct: 190826 ttttctttagccattcaaaa 190807

>gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosome 5, complete sequence
          Length = 197131

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    gaaagaatccaagtgcccac 254
              ||||||||||||||||||||
Sbjct: 131744 gaaagaatccaagtgcccac 131725

>ref|XM_862890.1| PREDICTED: Canis familiaris similar to G patch domain containing 1,
           transcript variant 3 (LOC476495), mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 376 cgacagcgacgaggacctgg 395
           ||||||||||||||||||||
Sbjct: 32  cgacagcgacgaggacctgg 51

>ref|XM_848771.1| PREDICTED: Canis familiaris similar to G patch domain containing 1,
           transcript variant 2 (LOC476495), mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 376 cgacagcgacgaggacctgg 395
           ||||||||||||||||||||
Sbjct: 32  cgacagcgacgaggacctgg 51

>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the
              gene for a novel protein (FLJ31208), three novel genes, a
              novel pseudogene and three CpG islands, complete sequence
          Length = 178850

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     acgttttctttagccattca 97
              ||||||||||||||||||||
Sbjct: 177816 acgttttctttagccattca 177835

>emb|AL359763.9| Human DNA sequence from clone RP11-169O17 on chromosome 13 Contains
           a cytochrome c pseudogene, a novel gene, the ADPRTL1
           gene for ADP-ribosyltransferase (NAD+; poly (ADP-ribose)
           polymerase)-like protein 1 , part of a TPTE and PTEN
           homologous inositol lipid phosphatase (TPIP) pseudogene
           and four CpG islands, complete sequence
          Length = 190765

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  acgttttctttagccattca 97
           ||||||||||||||||||||
Sbjct: 966 acgttttctttagccattca 985

>gb|AC124785.7| Rattus norvegicus 4 BAC CH230-141I8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 61619

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tttactcttcaaacttttat 298
             ||||||||||||||||||||
Sbjct: 56275 tttactcttcaaacttttat 56256

>emb|BX511069.14| Zebrafish DNA sequence from clone CH211-207I1 in linkage group 20
             Contains the 3' end of the gene for a novel protein
             similar to vertebrate dishevelled associated activator of
             morphogenesis 1 (DAAM1) and three novel genes, complete
             sequence
          Length = 89721

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    ttttctttagccattcaaaa 100
             ||||||||||||||||||||
Sbjct: 75401 ttttctttagccattcaaaa 75420

>gb|AC087516.12| Homo sapiens chromosome 15, clone RP11-475A13, complete sequence
          Length = 187299

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   atggatatttcttgcagttt 374
             ||||||||||||||||||||
Sbjct: 56867 atggatatttcttgcagttt 56848

>gb|AC040977.10| Homo sapiens chromosome 17, clone RP11-589P10, complete sequence
          Length = 174741

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    acgttttctttagccattca 97
             ||||||||||||||||||||
Sbjct: 55267 acgttttctttagccattca 55248

>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence
          Length = 169770

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    acgttttctttagccattca 97
             ||||||||||||||||||||
Sbjct: 48698 acgttttctttagccattca 48717

>gb|AC092546.4| Homo sapiens BAC clone RP11-801O14 from 4, complete sequence
          Length = 118981

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 237   aagaatccaagtgcccacactcat 260
             ||||||||||||| ||||||||||
Sbjct: 19094 aagaatccaagtggccacactcat 19117

>emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 in linkage group 17,
             complete sequence
          Length = 153573

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   cactactggttgggattagg 469
             ||||||||||||||||||||
Sbjct: 43181 cactactggttgggattagg 43162

>emb|BX537292.5| Zebrafish DNA sequence from clone CH211-213E17 in linkage group 10,
             complete sequence
          Length = 189446

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    ttttctttagccattcaaaagtaa 104
             |||||||| |||||||||||||||
Sbjct: 83934 ttttctttggccattcaaaagtaa 83957

>gb|AC106886.3| Homo sapiens chromosome 16 clone RP11-2C24, complete sequence
          Length = 207950

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   gaaagaatccaagtgcccac 254
             ||||||||||||||||||||
Sbjct: 95824 gaaagaatccaagtgcccac 95805

>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1476_F05
          Length = 125426

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   tcttcaaacttttatttcct 303
             ||||||||||||||||||||
Sbjct: 19407 tcttcaaacttttatttcct 19388

>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0496E03
          Length = 138622

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    tcttcaaacttttatttcct 303
              ||||||||||||||||||||
Sbjct: 118333 tcttcaaacttttatttcct 118314

>emb|AL390334.4|CNS06C7N Human chromosome 14 DNA sequence BAC R-664B22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170011

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gttttctttagccattcaaa 99
             ||||||||||||||||||||
Sbjct: 71421 gttttctttagccattcaaa 71402

>emb|BX510957.15| Zebrafish DNA sequence from clone DKEY-69C1 in linkage group 20, complete
              sequence
          Length = 149635

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    ctaattgtaaggcgctcaaa 333
              ||||||||||||||||||||
Sbjct: 134355 ctaattgtaaggcgctcaaa 134374

>emb|CR854904.9| Zebrafish DNA sequence from clone CH211-214F6 in linkage group 10,
             complete sequence
          Length = 116150

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    ttttctttagccattcaaaagtaa 104
             |||||||| |||||||||||||||
Sbjct: 46791 ttttctttggccattcaaaagtaa 46768

>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
             sequence
          Length = 194140

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   gctcaaatgtccttagagtg 346
             ||||||||||||||||||||
Sbjct: 35891 gctcaaatgtccttagagtg 35872

>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
             complete sequence
          Length = 92741

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   ttttactcttcaaacttttatttc 301
             |||||| |||||||||||||||||
Sbjct: 19339 ttttacccttcaaacttttatttc 19316


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,848,030
Number of Sequences: 3902068
Number of extensions: 3848030
Number of successful extensions: 70055
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69972
Number of HSP's gapped (non-prelim): 83
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)