ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12i09 |
|---|---|
| Clone Library Name | barley_pub |
>PSA6_ORYSA (Q9LSU3) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S| proteasome alpha subunit A) (20S proteasome subunit alpha-1) Length = 246 Score = 134 bits (338), Expect = 4e-32 Identities = 68/74 (91%), Positives = 72/74 (97%) Frame = -2 Query: 382 QEAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTT 203 QEAINF EKKMKD PQF+Y+ETVQIAISALQSVLQEDFKATEIEVGVVRK+DRVFR+LTT Sbjct: 173 QEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTT 232 Query: 202 EEIDQHLTAISERD 161 EEIDQHLTAISERD Sbjct: 233 EEIDQHLTAISERD 246
>PSA6B_ARATH (O81147) Proteasome subunit alpha type 6-B (EC 3.4.25.1)| (Proteasome subunit alpha type 1) (20S proteasome alpha subunit A-2) Length = 246 Score = 123 bits (308), Expect = 1e-28 Identities = 62/74 (83%), Positives = 67/74 (90%) Frame = -2 Query: 382 QEAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTT 203 QEA+NF EKKMK+ P FTYDETVQ AISALQSVLQEDFKATEIEVGVVR +D +FRSL T Sbjct: 173 QEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRT 232 Query: 202 EEIDQHLTAISERD 161 EEID+HLTAISERD Sbjct: 233 EEIDEHLTAISERD 246
>PSA6_TOBAC (Q9XG77) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S| proteasome alpha subunit A) (20S proteasome subunit alpha-1) Length = 246 Score = 121 bits (304), Expect = 4e-28 Identities = 61/74 (82%), Positives = 68/74 (91%) Frame = -2 Query: 382 QEAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTT 203 QEAINF EKKMK+ P F+Y+ETVQ AISALQSVLQEDFKA+EIEVGVV+KED +FR LTT Sbjct: 173 QEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTT 232 Query: 202 EEIDQHLTAISERD 161 EEID+HLTAISERD Sbjct: 233 EEIDEHLTAISERD 246
>PSA6_SOYBN (O48551) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S| proteasome alpha subunit A) (20S proteasome subunit alpha-1) (Proteasome iota subunit) Length = 246 Score = 120 bits (300), Expect = 1e-27 Identities = 61/74 (82%), Positives = 67/74 (90%) Frame = -2 Query: 382 QEAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTT 203 QEAINF EKKMK+ P FTY+ETVQ AISALQSVLQEDFKATEIEVGVVRK++ FR LTT Sbjct: 173 QEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTT 232 Query: 202 EEIDQHLTAISERD 161 +EID+HLTAISERD Sbjct: 233 DEIDEHLTAISERD 246
>PSA6A_ARATH (O81146) Proteasome subunit alpha type 6-A (EC 3.4.25.1)| (Proteasome subunit alpha type 1) (20S proteasome alpha subunit A-1) (Proteasome component 1) Length = 246 Score = 119 bits (299), Expect = 1e-27 Identities = 60/74 (81%), Positives = 67/74 (90%) Frame = -2 Query: 382 QEAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTT 203 QEA+NF EKKMK+ P FT+DETVQ AISALQSVLQEDFKATEIEVGVVR E+ FR+LTT Sbjct: 173 QEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTT 232 Query: 202 EEIDQHLTAISERD 161 EEI++HLTAISERD Sbjct: 233 EEIEEHLTAISERD 246
>PSA6_RAT (P60901) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome| iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) Length = 246 Score = 74.3 bits (181), Expect = 7e-14 Identities = 38/73 (52%), Positives = 52/73 (71%) Frame = -2 Query: 379 EAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTE 200 E+ +F EKK+K +T+++TV+ AI+ L +VL DFK +EIEVGVV E+ FR LT Sbjct: 174 ESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEA 233 Query: 199 EIDQHLTAISERD 161 EID HL A++ERD Sbjct: 234 EIDAHLVALAERD 246
>PSA6_MOUSE (Q9QUM9) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome| iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) Length = 246 Score = 74.3 bits (181), Expect = 7e-14 Identities = 38/73 (52%), Positives = 52/73 (71%) Frame = -2 Query: 379 EAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTE 200 E+ +F EKK+K +T+++TV+ AI+ L +VL DFK +EIEVGVV E+ FR LT Sbjct: 174 ESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEA 233 Query: 199 EIDQHLTAISERD 161 EID HL A++ERD Sbjct: 234 EIDAHLVALAERD 246
>PSA6_HUMAN (P60900) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome| iota chain) (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (27 kDa prosomal protein) (PROS-27) (p27K) Length = 246 Score = 74.3 bits (181), Expect = 7e-14 Identities = 38/73 (52%), Positives = 52/73 (71%) Frame = -2 Query: 379 EAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTE 200 E+ +F EKK+K +T+++TV+ AI+ L +VL DFK +EIEVGVV E+ FR LT Sbjct: 174 ESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEA 233 Query: 199 EIDQHLTAISERD 161 EID HL A++ERD Sbjct: 234 EIDAHLVALAERD 246
>PSA6_DROME (Q9XZJ4) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S| proteasome subunit alpha-1) Length = 244 Score = 67.8 bits (164), Expect = 6e-12 Identities = 36/73 (49%), Positives = 48/73 (65%) Frame = -2 Query: 379 EAINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTE 200 EA ++ EKK K P + ++ +Q+AIS L SVL DFK IE+GVV K D FR L Sbjct: 174 EANSYLEKKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDER 231 Query: 199 EIDQHLTAISERD 161 EI++HLT I+E+D Sbjct: 232 EIEEHLTKIAEKD 244
>PSA6_SCHPO (O94517) Probable proteasome subunit alpha type 6 (EC 3.4.25.1)| Length = 244 Score = 62.8 bits (151), Expect = 2e-10 Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = -2 Query: 379 EAINFXEKKMK-DXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTT 203 E IN+ EK+ K D +TV+ I AL S L DFK+TE+++GVV ++D+ FR L+ Sbjct: 172 ETINWLEKRFKKDGIPSNLTDTVETGIQALMSSLSTDFKSTELQIGVV-EDDKPFRVLSV 230 Query: 202 EEIDQHLTAISERD 161 EEI+ HL +I+E+D Sbjct: 231 EEIEAHLQSIAEKD 244
>PSA6_CAEEL (O17586) Proteasome subunit alpha type 6 (EC 3.4.25.1) (Proteasome| subunit alpha 1) Length = 246 Score = 59.3 bits (142), Expect = 2e-09 Identities = 28/72 (38%), Positives = 47/72 (65%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEE 197 A +F EKK+K + T E +++AI ALQ+ L D ++ ++EV VV K++ F LT+++ Sbjct: 175 ATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQ 234 Query: 196 IDQHLTAISERD 161 ++ HL I+ RD Sbjct: 235 VEHHLNQIANRD 246
>PSA1_TRYBB (Q9GU37) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20SPA1)| Length = 266 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = -2 Query: 379 EAINFXEKKMKDXPQFTYD--ETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLT 206 EA F EKK K+ P T E IA++ALQS L E +A+ +EVG +D F ++ Sbjct: 175 EACAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVS 234 Query: 205 TEEIDQHLTAISE 167 E+ + LT +++ Sbjct: 235 DREVKKWLTPLAK 247
>PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 244 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -2 Query: 340 PQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQHLTAIS 170 P T DE + I+++ L+ V++E +T +EV + KE R F T EE++QH+ I+ Sbjct: 189 PDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKE-REFYMFTKEEVEQHIKNIA 244
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/68 (32%), Positives = 41/68 (60%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEE 197 A+ E+K KD + +E +++AI AL +++ A IEV ++ +D+ FR L+ EE Sbjct: 173 AMAIFEEKYKD--DMSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREE 229 Query: 196 IDQHLTAI 173 I+++L + Sbjct: 230 IEKYLNEV 237
>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 40.4 bits (93), Expect = 0.001 Identities = 24/65 (36%), Positives = 38/65 (58%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEE 197 A+ E K +D T DE +++AI AL +++ A IEV V+ +D+ FR L+ EE Sbjct: 173 AMAIFEDKYRD--DMTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEE 229 Query: 196 IDQHL 182 I++ L Sbjct: 230 IEKFL 234
>PSMA_ARCFU (O29760) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/68 (26%), Positives = 39/68 (57%) Frame = -2 Query: 367 FXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQ 188 F EK+ +D ++D+ + + + A+ ++ + IEVG V+ +DR F+ ++ EE+ Sbjct: 174 FFEKEYRD--DLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKP 231 Query: 187 HLTAISER 164 ++ +ER Sbjct: 232 YVERANER 239
>PSMA_METAC (Q8TPX5) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 247 Score = 39.3 bits (90), Expect = 0.002 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = -2 Query: 325 DETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQHLTAISER 164 D + + + AL + F A +EVGVV ED+ FR L EE++ ++ I E+ Sbjct: 186 DAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>PSMA_METMA (Q8PTU1) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 249 Score = 38.9 bits (89), Expect = 0.003 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = -2 Query: 325 DETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQHLTAISER 164 D + + + AL + F A +EVGVV ED+ FR L EE++ ++ I E+ Sbjct: 188 DAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>PSA7A_ARATH (P30186) Proteasome subunit alpha type 7-A (EC 3.4.25.1)| (Proteasome subunit alpha type 4) (20S proteasome alpha subunit D-1) (TAS-G64) (Proteasome component 6A) Length = 250 Score = 35.8 bits (81), Expect = 0.026 Identities = 24/59 (40%), Positives = 33/59 (55%) Frame = -2 Query: 367 FXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEID 191 F EK K+ ETV++AI AL V++ K IEV V+ +E+ V + L EEID Sbjct: 173 FLEKNYKESAG---QETVKLAIRALLEVVESGGK--NIEVAVMTREEGVLKQLEEEEID 226
>PSMA_METTE (Q59565) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 247 Score = 35.8 bits (81), Expect = 0.026 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -2 Query: 325 DETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQHLTAISER 164 + + + + AL + F A +EVGVV +D+ FR L EE+ ++ I E+ Sbjct: 186 EAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>PSA2B_ARATH (Q8L4A7) Proteasome subunit alpha type 2-B (EC 3.4.25.1) (20S| proteasome alpha subunit B-2) Length = 235 Score = 35.0 bits (79), Expect = 0.044 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEE 197 A F EK+ + + D+ + AI L+ + + + IE+G + D+VFR LT E Sbjct: 170 AKTFLEKRYTEDMEL--DDAIHTAILTLKEGFEGEISSKNIEIGKIGT-DKVFRVLTPAE 226 Query: 196 IDQHLTAI 173 ID +L + Sbjct: 227 IDDYLAEV 234
>PSA2A_ARATH (O23708) Proteasome subunit alpha type 2-A (EC 3.4.25.1) (20S| proteasome alpha subunit B) (Proteasome component 3) Length = 235 Score = 35.0 bits (79), Expect = 0.044 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEE 197 A F EK+ + + D+ + AI L+ + + + IE+G + D+VFR LT E Sbjct: 170 AKTFLEKRYTEDMEL--DDAIHTAILTLKEGFEGEISSKNIEIGKIGA-DKVFRVLTPAE 226 Query: 196 IDQHLTAI 173 ID +L + Sbjct: 227 IDDYLAEV 234
>PSA2_ORYSA (Q9LSU2) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit B) (20S proteasome subunit alpha-2) Length = 235 Score = 32.3 bits (72), Expect = 0.28 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEE 197 A F EK+ + + D+ + AI L+ + A IE+G++R DR F+ L+ E Sbjct: 170 AKTFLEKRYTEDMEL--DDAIHTAILTLKEGYEGQISANNIEIGIIR-SDREFKVLSPAE 226 Query: 196 IDQHLTAI 173 I L + Sbjct: 227 IKDFLEEV 234
>PSA7B_ARATH (O24616) Proteasome subunit alpha type 7-B (EC 3.4.25.1)| (Proteasome subunit alpha type 4) (20S proteasome alpha subunit D-2) (Proteasome component 6B) (Proteasome component 6C) Length = 250 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = -2 Query: 367 FXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEID 191 F EK K+ + ET+++AI AL V++ K IEV V+ +E+ R L EID Sbjct: 173 FLEKNYKES---SGQETIKLAIRALLEVVESGGK--NIEVAVMTREETGLRQLEEAEID 226
>PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 31.6 bits (70), Expect = 0.48 Identities = 16/51 (31%), Positives = 31/51 (60%) Frame = -2 Query: 325 DETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQHLTAI 173 D+ +++AI AL L+E A IEV + +++ ++ L EE++++L I Sbjct: 188 DDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 30.8 bits (68), Expect = 0.83 Identities = 15/51 (29%), Positives = 31/51 (60%) Frame = -2 Query: 325 DETVQIAISALQSVLQEDFKATEIEVGVVRKEDRVFRSLTTEEIDQHLTAI 173 D+ +++AI AL L+E A IEV + +++ ++ L EE+++++ I Sbjct: 188 DDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
>PSMA_SULAC (Q4JB24) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 242 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = -2 Query: 376 AINFXEKKMKDXPQFTYDETVQIAISALQSVLQ--EDFKATEIEVGVVRKEDRVFRSLTT 203 A + EK K+ T+ +A+ AL + L+ E + +E+G + F+ LTT Sbjct: 175 ATEYLEKNYKE--DLDIQSTILLALRALMATLKPGEKLNYSSVEIGYADVDSGTFKKLTT 232 Query: 202 EE 197 EE Sbjct: 233 EE 234
>SYA_MYCPA (P61705) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 900 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +3 Query: 27 HXYMAAVVGPSSLLHMQMIH*MFLGWP*NKITVYGCIDSYSHIAQSRSLMA 179 H + +A +GP ++L + G ++ Y +DS+ H+A+ R+LMA Sbjct: 687 HVHNSAQIGPVTILGESSV-----GSGVRRVEAYVGLDSFRHLAKERALMA 732
>PCNT_MOUSE (P48725) Pericentrin| Length = 1920 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -2 Query: 367 FXEKKMKDXPQFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKED 227 + EKK+KD + TY E + + LQ ++ ++TEI V E+ Sbjct: 402 YFEKKLKDAEK-TYQEDLTVFQQRLQEAREDSLESTEISSSCVLPEE 447
>SYA_MYCLE (Q9CCT0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 908 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +3 Query: 27 HXYMAAVVGPSSLLHMQMIH*MFLGWP*NKITVYGCIDSYSHIAQSRSLMA 179 H + A +GP ++L I G ++ Y +DS+ H+A+ R+LMA Sbjct: 695 HVHNTAQIGPVTILGESSI-----GSGVRRVEAYVGLDSFRHLAKERALMA 740
>ZNF70_HUMAN (Q9UC06) Zinc finger protein 70 (Zinc finger protein N27C7-1)| Length = 446 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Frame = -1 Query: 239 EERRPCLPVTHDRGD*SAPNSH*RARLSYVTVAVNAPINCYFV--SWPAKKHSVNHLHV* 66 EE PC DRGD S PN+ R T P C ++ H + HL + Sbjct: 110 EEPSPCDCAETDRGD-SGPNAPHR------TPQPAKPYACRECGKAFSQSSHLLRHLVIH 162 Query: 65 QGRRAYHCC 39 G + Y CC Sbjct: 163 TGEKPYECC 171
>DYH9_HUMAN (Q9NYC9) Ciliary dynein heavy chain 9 (Axonemal beta dynein heavy| chain 9) Length = 4486 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +3 Query: 126 YGCIDSYSHIA-QSRSLMAVRC*SISSVVSDRKTRSSFLTTPTSIS 260 +GC D ++ I+ + S++AV+ SI + D+K SFL S++ Sbjct: 1918 WGCFDEFNRISVEVLSVVAVQVKSIQDAIRDKKQWFSFLGEEISLN 1963
>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067| Length = 494 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -1 Query: 323 RNCSDCDFCIAICSAGRFQGY 261 R C DC CIA+C A ++ Y Sbjct: 135 RGCIDCLSCIAMCPARKYSNY 155
>RPC1_PLAFA (P27625) DNA-directed RNA polymerase III largest subunit (EC| 2.7.7.6) Length = 2339 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -2 Query: 379 EAINFXEKKMKDXPQFTYDETVQIAISALQSVLQED 272 E I + EKKM+ P T +ET++I + ++ L+ D Sbjct: 838 EIILYNEKKMQIQPGCTLEETLEIKVKSILDDLRND 873
>MLO7_ARATH (O22752) MLO-like protein 7 (AtMlo7)| Length = 542 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = -3 Query: 123 LLFCFMASQETFSESFA---CVARKTGLPLLPCXSAD 22 ++ F++ TF E + CV RK L +LPC S D Sbjct: 86 MILGFISLLLTFGEPYILKICVPRKAALSMLPCLSED 122
>ENV_SRV1 (P04027) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Coat protein GP20] Length = 587 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/57 (24%), Positives = 25/57 (43%) Frame = +3 Query: 132 CIDSYSHIAQSRSLMAVRC*SISSVVSDRKTRSSFLTTPTSISVALKSSCRTDCNAE 302 C Y + SL V C + ++ + ++TPT+ S SC + CN++ Sbjct: 44 CAGGYVSSPPTNSLTTVSCSTYTAYSVTNSLKWQCVSTPTTASPTHIGSCPSQCNSQ 100
>SYA_MYCTU (O07438) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 904 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +3 Query: 27 HXYMAAVVGPSSLLHMQMIH*MFLGWP*NKITVYGCIDSYSHIAQSRSLMA 179 H A +GP ++L I G ++ Y +DS+ H+A+ R+LMA Sbjct: 691 HVSNTAQIGPVTILGESSI-----GSGVRRVEAYVGLDSFRHLAKERALMA 736
>SYA_MYCBO (Q7TYB1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 904 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +3 Query: 27 HXYMAAVVGPSSLLHMQMIH*MFLGWP*NKITVYGCIDSYSHIAQSRSLMA 179 H A +GP ++L I G ++ Y +DS+ H+A+ R+LMA Sbjct: 691 HVSNTAQIGPVTILGESSI-----GSGVRRVEAYVGLDSFRHLAKERALMA 736
>CARB_PYRFU (Q8U085) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1056 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 41 SSGRPVFLATHANDSLNVSWLAMKQN 118 S+G L TH D+L SWL++K N Sbjct: 894 STGEVAALGTHYEDALLKSWLSVKPN 919
>VEGFC_MOUSE (P97953) Vascular endothelial growth factor C precursor (VEGF-C)| (Vascular endothelial growth factor-related protein) (VRP) (Flt4 ligand) (Flt4-L) Length = 415 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/38 (26%), Positives = 18/38 (47%) Frame = -3 Query: 147 CSCQCTHKLLFCFMASQETFSESFACVARKTGLPLLPC 34 C+C+CT CF+ ++ ++ +C R L C Sbjct: 354 CACECTENTQKCFLKGKKFHHQTCSCYRRPCANRLKHC 391 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,628,582 Number of Sequences: 219361 Number of extensions: 863150 Number of successful extensions: 2282 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2223 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2280 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
