| Clone Name | rbags12i02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | EHD4_HUMAN (Q9H223) EH-domain-containing protein 4 (Hepatocellul... | 114 | 2e-25 | 2 | EHD4_MOUSE (Q9EQP2) EH-domain-containing protein 4 (mPAST2) | 113 | 4e-25 | 3 | EHD1_MOUSE (Q9WVK4) EH-domain-containing protein 1 (mPAST1) | 112 | 1e-24 | 4 | EHD3_HUMAN (Q9NZN3) EH-domain-containing protein 3 | 112 | 1e-24 | 5 | EHD2_HUMAN (Q9NZN4) EH-domain-containing protein 2 | 111 | 2e-24 | 6 | EHD1_HUMAN (Q9H4M9) EH-domain-containing protein 1 (Testilin) (h... | 111 | 2e-24 | 7 | EHD3_MOUSE (Q9QXY6) EH-domain-containing protein 3 | 111 | 2e-24 | 8 | SKPL_PSEAE (Q9HXY5) Skp-like protein precursor | 31 | 3.5 |
|---|
>EHD4_HUMAN (Q9H223) EH-domain-containing protein 4 (Hepatocellular| carcinoma-associated protein 10/11) Length = 541 Score = 114 bits (285), Expect = 2e-25 Identities = 52/114 (45%), Positives = 80/114 (70%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+KA R++N+ +KRAR AK+HAYII +LK +MPS+ GK +++LI L + + Sbjct: 284 DIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSVFGKENKKRELISRLPEIYI 343 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELL 203 ++QRE+ + AGDFP V+ +E L Y KF +KPK+I+AVD+ML I L+ Sbjct: 344 QLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSNKISPLM 397
>EHD4_MOUSE (Q9EQP2) EH-domain-containing protein 4 (mPAST2)| Length = 541 Score = 113 bits (283), Expect = 4e-25 Identities = 52/114 (45%), Positives = 80/114 (70%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+KA R++N+ +KRAR AK+HAYII +LK +MP+M GK +++LI L + + Sbjct: 284 DIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPNMFGKENKKRELIYRLPEIYV 343 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELL 203 ++QRE+ + AGDFP V+ +E L Y KF +KPK+I+AVD+ML I L+ Sbjct: 344 QLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLTNKISSLM 397
>EHD1_MOUSE (Q9WVK4) EH-domain-containing protein 1 (mPAST1)| Length = 534 Score = 112 bits (279), Expect = 1e-24 Identities = 48/114 (42%), Positives = 78/114 (68%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+ A R++N+ +KRAR AK+HAYII LK +MP++ GK +++L++NL + + Sbjct: 281 DIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQ 340 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELL 203 K++REH + +GDFP + +E L KF+ +KPK++ VDDML DI L+ Sbjct: 341 KIEREHQISSGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
>EHD3_HUMAN (Q9NZN3) EH-domain-containing protein 3| Length = 546 Score = 112 bits (279), Expect = 1e-24 Identities = 46/114 (40%), Positives = 80/114 (70%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+ A R++N+ +KRAR AK+HAYII LK +MPS+ GK +++L++NL + + Sbjct: 281 DIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDNKKKELVNNLAEIYG 340 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELL 203 +++REH + GDFP ++ ++ L KF+ +K K+++ VDDML +DI +L+ Sbjct: 341 RIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLM 394
>EHD2_HUMAN (Q9NZN4) EH-domain-containing protein 2| Length = 543 Score = 111 bits (277), Expect = 2e-24 Identities = 51/118 (43%), Positives = 80/118 (67%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+ A R++N+ VKRAR ++HAYII +LK +MPS+ GK +++LI L FA Sbjct: 281 DIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKEMPSVFGKENKKKQLILKLPVIFA 340 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELLKNFR 191 K+Q EHH+ GDFP + +E L + KF +KPK+++A+D+ML +DI +L+ R Sbjct: 341 KIQLEHHISPGDFPDCQKMQELLMAHDFTKFHSLKPKLLEALDEMLTHDIAKLMPLLR 398
>EHD1_HUMAN (Q9H4M9) EH-domain-containing protein 1 (Testilin) (hPAST1)| Length = 534 Score = 111 bits (277), Expect = 2e-24 Identities = 48/114 (42%), Positives = 77/114 (67%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+ A R++N+ +KRAR AK+HAYII LK +MP++ GK +++L++NL + + Sbjct: 281 DIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQ 340 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELL 203 K++REH + GDFP + +E L KF+ +KPK++ VDDML DI L+ Sbjct: 341 KIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
>EHD3_MOUSE (Q9QXY6) EH-domain-containing protein 3| Length = 535 Score = 111 bits (277), Expect = 2e-24 Identities = 46/114 (40%), Positives = 80/114 (70%) Frame = -3 Query: 544 DLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKNQMPSMMGKAKAQQKLIDNLEDEFA 365 D++ +P+ A R++N+ +KRAR AK+HAYII LK +MPS+ GK +++L++NL + + Sbjct: 281 DIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDTKKKELVNNLAEIYG 340 Query: 364 KVQREHHLPAGDFPYVEHFREALGGYSIDKFEKVKPKMIQAVDDMLGYDIPELL 203 +++REH + GDFP ++ ++ L KF+ +K K+++ VDDML +DI +L+ Sbjct: 341 RIEREHQISPGDFPNLKKMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLM 394
>SKPL_PSEAE (Q9HXY5) Skp-like protein precursor| Length = 168 Score = 30.8 bits (68), Expect = 3.5 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 9/84 (10%) Frame = -3 Query: 439 NQMPSMMGKAKA-QQKLIDN----LEDEFAKVQREHHLPAGDFPYV-EHFREALGGYSID 278 N++ ++ AKA Q KL+ N + + K + + A DF + + E+ D Sbjct: 57 NKLKNLERDAKALQDKLVSNGSKMSQGDREKAELDFKQKARDFQFQSKELNESKAAADRD 116 Query: 277 KFEKVKPKMIQAVDDML---GYDI 215 +K+KPK+ QAV++ + GYD+ Sbjct: 117 MLKKLKPKLDQAVEETIKKGGYDM 140 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,057,953 Number of Sequences: 219361 Number of extensions: 1914248 Number of successful extensions: 5759 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5530 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5757 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)