ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12i02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F22, full insert sequence Length = 1996 Score = 379 bits (191), Expect = e-102 Identities = 399/467 (85%), Gaps = 1/467 (0%) Strand = Plus / Minus Query: 176 tcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtc 235 ||||||||| |||||||||||||||||||| || || || |||||||| || ||||| || Sbjct: 1733 tcactcgtatgggttcctgaagttcttgaggagttctggaatgtcgtatccaagcatatc 1674 Query: 236 gtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcc 295 ||||||||||| | |||||||||||| | ||||| |||||||| ||||| ||||| || Sbjct: 1673 atccaccgcctgcaccatcttgggcttgattttctcaaacttgtcaatgctatacccacc 1614 Query: 296 caatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttccct 355 || | |||||||| |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 1613 caggacatctctgaaatgctccacataagggaaatctccagctggaagatgttgttccct 1554 Query: 356 ttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagcttt 415 ||| |||||||| ||||| | ||||||||||||||| ||| ||| || ||||| ||||| Sbjct: 1553 ttggacctttgcgaactcattctccaaattgtctataagtcgctgctgagctttggcttt 1494 Query: 416 ccccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggc 475 |||||||||| |||||| | ||||| | ||| |||||||||| ||||| |||||||| Sbjct: 1493 gcccatcatcgcaggcatctccttcttcaaatgaccaattatatgggcatgaatcttggc 1434 Query: 476 agctctagcacgtttgacgaattcattgatcctgcgatcacaagctttctttggtatatc 535 ||||| |||||||| || ||||||||||| | || |||||||||||||| |||||||| Sbjct: 1433 tgctcttgcacgtttaacaaattcattgattcgacggtcacaagctttcttcggtatatc 1374 Query: 536 ttttagatcagaaagggagatcatcctgctctttctcaaatagttcctttccaatcgggc 595 ||| |||||||||| | |||||||| |||||| |||||||||||||||||||||| || | Sbjct: 1373 tttcagatcagaaa-gtagatcatcttgctctctctcaaatagttcctttccaattggac 1315 Query: 596 caacagctgattcctttactggtttatcattgaatgatccaatataa 642 ||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 1314 caacagctgattcatttactggtttgtcattaaatgatccaatataa 1268
>dbj|AK073124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033008E09, full insert sequence Length = 1873 Score = 367 bits (185), Expect = 3e-98 Identities = 399/469 (85%), Gaps = 1/469 (0%) Strand = Plus / Minus Query: 174 gctcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatg 233 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1726 gctcactcgtaagggttcctgaagttcttgaggagctccgggatgtcgtacgcgagcatg 1667 Query: 234 tcgtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccg 293 |||||||| ||||| | || ||||||||||| |||||||||| |||||||| ||||||| Sbjct: 1666 tcgtccacggcctgcaccagcttgggcttcatcttctcgaacctgtcgatgttgtaccca 1607 Query: 294 cccaatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttcc 353 ||||| | || |||||||||| |||| |||||| ||||| || || ||||| | ||| Sbjct: 1606 cccaacacctccttgaagtgctcaacgtcagggaagtctccggctggaagatggtactcc 1547 Query: 354 ctttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagct 413 ||||| |||||||||||||| || ||| |||||||||||| |||||| || |||||| Sbjct: 1546 ctttggacctttgcaaactcatcacccaggttgtctatgagtcgctgttgagccttagct 1487 Query: 414 ttccccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttg 473 ||||||||||| | |||||| | ||||||||||| |||||||| |||||||| ||||| Sbjct: 1486 ttccccatcattgcaggcatctccttctttagatggccaattatgtaagcatgaatctta 1427 Query: 474 gcagctctagcacgtttgacgaattcattgatcctgcgatcacaagctttctttggtata 533 ||||||||||||||||| || || || |||| || |||||||| || ||||| ||||| Sbjct: 1426 gcagctctagcacgtttaacaaactcgttgacccgacgatcacaggccttcttgggtatg 1367 Query: 534 tcttttagatcagaaagggagatcatcctgctctttctcaaatagttcctttccaatcgg 593 ||||| |||||| | | |||||||||| |||||||||||||| | ||||||||||| || Sbjct: 1366 tctttcagatcacaga-ggagatcatcttgctctttctcaaacaagtcctttccaattgg 1308 Query: 594 gccaacagctgattcctttactggtttatcattgaatgatccaatataa 642 |||||||||||||| || |||||||| ||||||||||| || |||||| Sbjct: 1307 tccaacagctgattcattcactggtttgtcattgaatgacccgatataa 1259
>gb|AY111043.1| Zea mays CL11409_1 mRNA sequence Length = 1044 Score = 266 bits (134), Expect = 8e-68 Identities = 384/466 (82%), Gaps = 1/466 (0%) Strand = Plus / Plus Query: 176 tcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtc 235 ||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 311 tcactcgtacgggttccgcaagttcttgaggagctccgggatgtcgtgagcgagcatgtc 370 Query: 236 gtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcc 295 |||||||||||| | |||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 371 gtccaccgcctgcaccatcttcggcttcagcttctcgaacttgtcgatgctgtacccgcc 430 Query: 296 caatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttccct 355 || | | |||||||||| |||| ||||| ||||| ||||||||||| | |||||| Sbjct: 431 cagcacctgcttgaagtgctcgacgtcggggaagtctccggcggggagatggtattccct 490 Query: 356 ttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagcttt 415 || |||||||||||||| || || || |||||||||||| ||| || || || ||||| Sbjct: 491 ctgcacctttgcaaactcctcgtctaagttgtctatgagtcgctgctgagccttggcttt 550 Query: 416 ccccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggc 475 |||||||| | |||||| | ||||| ||||| |||||||| |||||||| |||||||| Sbjct: 551 tcccatcattgcaggcatctccttcttcagatggccaattatgtaagcatggatcttggc 610 Query: 476 agctctagcacgtttgacgaattcattgatcctgcgatcacaagctttctttggtatatc 535 ||||| ||||| || || || ||||||| || ||||||||||| ||||| || || || Sbjct: 611 agctcgggcacgcttaacaaactcattgacccgtcgatcacaagccttcttaggaatgtc 670 Query: 536 ttttagatcagaaagggagatcatcctgctctttctcaaatagttcctttccaatcgggc 595 || || ||| | | |||| ||||| ||||| ||||||| | || |||||||| || | Sbjct: 671 cttcaggtcacaga-ggaggtcatcttgctccctctcaaacaagtcttttccaattggcc 729 Query: 596 caacagctgattcctttactggtttatcattgaatgatccaatata 641 |||||||||| || || ||||| |||||||| |||||||| ||||| Sbjct: 730 caacagctgaatcattcactggcttatcattaaatgatccgatata 775
>gb|AY110908.1| Zea mays CL37059_1 mRNA sequence Length = 1228 Score = 242 bits (122), Expect = 1e-60 Identities = 201/226 (88%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 417 cccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggca 476 |||||||| | |||||| | ||||||||||| || |||||||||||||| ||||||||| Sbjct: 516 cccatcattgtaggcatctccttctttagatgacctattatataagcatggatcttggca 575 Query: 477 gctctagcacgtttgacgaattcattgatcctgcgatcacaagctttctttggtatatct 536 |||||||||||||| || ||||||||||||| ||| ||||| |||||||| || |||||| Sbjct: 576 gctctagcacgtttaacaaattcattgatccggcggtcacaggctttcttggggatatct 635 Query: 537 tttagatcagaaagggagatcatcctgctctttctcaaatagttcctttccaatcgggcc 596 || |||||||||| | |||||||| |||||| ||||||||||||||||||||| || || Sbjct: 636 ttgagatcagaaa-gaagatcatcttgctctctctcaaatagttcctttccaagtggacc 694 Query: 597 aacagctgattcctttactggtttatcattgaatgatccaatataa 642 |||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 695 aacagctgattcatttactggtttgtcattgaatgatccaatataa 740 Score = 139 bits (70), Expect = 1e-29 Identities = 181/218 (83%) Strand = Plus / Plus Query: 176 tcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtc 235 ||||||||| ||||| |||||||||||||| || || || ||||| || || ||||| || Sbjct: 275 tcactcgtatgggtttctgaagttcttgagaagttcaggaatgtcatatccaagcatatc 334 Query: 236 gtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcc 295 ||||| ||||| ||||||||||||||||||||||| |||||||| | |||||| |||| Sbjct: 335 atccacggcctgtatcatcttgggcttcaccttctcaaacttgtcaaagctgtaaccgct 394 Query: 296 caatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttccct 355 ||| | ||| ||||||||||||| ||||| |||||||| | || ||||| | ||||| Sbjct: 395 caagacctctttgaagtgctccacataaggaaaatctcccgacggaagatggtattcccg 454 Query: 356 ttgtacctttgcaaactcgtcctccaaattgtctatga 393 ||| |||||||||||||| || || ||||||||||| Sbjct: 455 ttgcacctttgcaaactcatcaggcagattgtctatga 492
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 178 bits (90), Expect = 1e-41 Identities = 165/190 (86%) Strand = Plus / Plus Query: 174 gctcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatg 233 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 3166762 gctcactcgtaagggttcctgaagttcttgaggagctccgggatgtcgtacgcgagcatg 3166821 Query: 234 tcgtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccg 293 |||||||| ||||| | || ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 3166822 tcgtccacggcctgcaccagcttgggcttcatcttctcgaacttgtcgatgttgtaccca 3166881 Query: 294 cccaatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttcc 353 ||||| | || |||||||||| |||| |||||| ||||| || || ||||| | ||| Sbjct: 3166882 cccaacacctccttgaagtgctcaacgtcagggaagtctccggctggaagatggtactcc 3166941 Query: 354 ctttgtacct 363 ||||| |||| Sbjct: 3166942 ctttggacct 3166951 Score = 121 bits (61), Expect = 3e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 358 gtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttcc 417 |||||||||||||||| || ||| |||||||||||| |||||| || |||||||||| Sbjct: 3167111 gtacctttgcaaactcatcacccaggttgtctatgagtcgctgttgagccttagctttcc 3167170 Query: 418 ccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggcag 477 ||||||| | |||||| | ||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 3167171 ccatcattgcaggcatctccttctttagatggccaattatgtaagcatgaatcttagcag 3167230 Query: 478 ctctagcacgttt 490 ||||||||||||| Sbjct: 3167231 ctctagcacgttt 3167243 Score = 101 bits (51), Expect = 3e-18 Identities = 106/123 (86%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 510 cgatcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctcttt 569 |||||||| || ||||| ||||| ||||| |||||| | ||| |||||||| |||||||| Sbjct: 3167347 cgatcacaggccttcttgggtatgtctttcagatcacagagg-agatcatcttgctcttt 3167405 Query: 570 ctcaaatagttcctttccaatcgggccaacagctgattcctttactggtttatcattgaa 629 |||||| | ||||||||||| || |||||||||||||| || |||||||| |||||||| Sbjct: 3167406 ctcaaacaagtcctttccaattggtccaacagctgattcattcactggtttgtcattgaa 3167465 Query: 630 tga 632 ||| Sbjct: 3167466 tga 3167468
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 178 bits (90), Expect = 1e-41 Identities = 165/190 (86%) Strand = Plus / Plus Query: 174 gctcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatg 233 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 94916 gctcactcgtaagggttcctgaagttcttgaggagctccgggatgtcgtacgcgagcatg 94975 Query: 234 tcgtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccg 293 |||||||| ||||| | || ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 94976 tcgtccacggcctgcaccagcttgggcttcatcttctcgaacttgtcgatgttgtaccca 95035 Query: 294 cccaatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttcc 353 ||||| | || |||||||||| |||| |||||| ||||| || || ||||| | ||| Sbjct: 95036 cccaacacctccttgaagtgctcaacgtcagggaagtctccggctggaagatggtactcc 95095 Query: 354 ctttgtacct 363 ||||| |||| Sbjct: 95096 ctttggacct 95105 Score = 121 bits (61), Expect = 3e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 358 gtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttcc 417 |||||||||||||||| || ||| |||||||||||| |||||| || |||||||||| Sbjct: 95265 gtacctttgcaaactcatcacccaggttgtctatgagtcgctgttgagccttagctttcc 95324 Query: 418 ccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggcag 477 ||||||| | |||||| | ||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 95325 ccatcattgcaggcatctccttctttagatggccaattatgtaagcatgaatcttagcag 95384 Query: 478 ctctagcacgttt 490 ||||||||||||| Sbjct: 95385 ctctagcacgttt 95397 Score = 101 bits (51), Expect = 3e-18 Identities = 106/123 (86%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 510 cgatcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctcttt 569 |||||||| || ||||| ||||| ||||| |||||| | ||| |||||||| |||||||| Sbjct: 95501 cgatcacaggccttcttgggtatgtctttcagatcacagagg-agatcatcttgctcttt 95559 Query: 570 ctcaaatagttcctttccaatcgggccaacagctgattcctttactggtttatcattgaa 629 |||||| | ||||||||||| || |||||||||||||| || |||||||| |||||||| Sbjct: 95560 ctcaaacaagtcctttccaattggtccaacagctgattcattcactggtttgtcattgaa 95619 Query: 630 tga 632 ||| Sbjct: 95620 tga 95622
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 178 bits (90), Expect = 1e-41 Identities = 165/190 (86%) Strand = Plus / Plus Query: 174 gctcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatg 233 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 38949 gctcactcgtaagggttcctgaagttcttgaggagctccgggatgtcgtacgcgagcatg 39008 Query: 234 tcgtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccg 293 |||||||| ||||| | || ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 39009 tcgtccacggcctgcaccagcttgggcttcatcttctcgaacttgtcgatgttgtaccca 39068 Query: 294 cccaatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttcc 353 ||||| | || |||||||||| |||| |||||| ||||| || || ||||| | ||| Sbjct: 39069 cccaacacctccttgaagtgctcaacgtcagggaagtctccggctggaagatggtactcc 39128 Query: 354 ctttgtacct 363 ||||| |||| Sbjct: 39129 ctttggacct 39138 Score = 121 bits (61), Expect = 3e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 358 gtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttcc 417 |||||||||||||||| || ||| |||||||||||| |||||| || |||||||||| Sbjct: 39298 gtacctttgcaaactcatcacccaggttgtctatgagtcgctgttgagccttagctttcc 39357 Query: 418 ccatcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggcag 477 ||||||| | |||||| | ||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 39358 ccatcattgcaggcatctccttctttagatggccaattatgtaagcatgaatcttagcag 39417 Query: 478 ctctagcacgttt 490 ||||||||||||| Sbjct: 39418 ctctagcacgttt 39430 Score = 101 bits (51), Expect = 3e-18 Identities = 106/123 (86%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 510 cgatcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctcttt 569 |||||||| || ||||| ||||| ||||| |||||| | ||| |||||||| |||||||| Sbjct: 39534 cgatcacaggccttcttgggtatgtctttcagatcacagagg-agatcatcttgctcttt 39592 Query: 570 ctcaaatagttcctttccaatcgggccaacagctgattcctttactggtttatcattgaa 629 |||||| | ||||||||||| || |||||||||||||| || |||||||| |||||||| Sbjct: 39593 ctcaaacaagtcctttccaattggtccaacagctgattcattcactggtttgtcattgaa 39652 Query: 630 tga 632 ||| Sbjct: 39653 tga 39655
>dbj|AK058991.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F08, full insert sequence Length = 290 Score = 168 bits (85), Expect = 1e-38 Identities = 115/125 (92%) Strand = Plus / Minus Query: 174 gctcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatg 233 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 143 gctcactcgtaagggttcctgaagttcttgaggagctccgggatgtcgtacgcgagcatg 84 Query: 234 tcgtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccg 293 |||||||| ||||| | || ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 83 tcgtccacggcctgcaccagcttgggcttcatcttctcgaacttgtcgatgttgtaccca 24 Query: 294 cccaa 298 ||||| Sbjct: 23 cccaa 19
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 147 bits (74), Expect = 5e-32 Identities = 111/122 (90%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 513 tcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctctttctc 572 |||||||||||||| ||||||||||| ||||||||||| |||||||| |||||| |||| Sbjct: 28309159 tcacaagctttcttcggtatatctttcagatcagaaagt-agatcatcttgctctctctc 28309101 Query: 573 aaatagttcctttccaatcgggccaacagctgattcctttactggtttatcattgaatga 632 |||||||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| Sbjct: 28309100 aaatagttcctttccaattggaccaacagctgattcatttactggtttgtcattaaatga 28309041 Query: 633 tc 634 || Sbjct: 28309040 tc 28309039 Score = 143 bits (72), Expect = 8e-31 Identities = 159/188 (84%) Strand = Plus / Minus Query: 176 tcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtc 235 ||||||||| |||||||||||||||||||| || || || |||||||| || ||||| || Sbjct: 28310034 tcactcgtatgggttcctgaagttcttgaggagttctggaatgtcgtatccaagcatatc 28309975 Query: 236 gtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcc 295 ||||||||||| | |||||||||||| | ||||| |||||||| ||||| ||||| || Sbjct: 28309974 atccaccgcctgcaccatcttgggcttgattttctcaaacttgtcaatgctatacccacc 28309915 Query: 296 caatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttccct 355 || | |||||||| |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 28309914 caggacatctctgaaatgctccacataagggaaatctccagctggaagatgttgttccct 28309855 Query: 356 ttgtacct 363 ||| |||| Sbjct: 28309854 ttggacct 28309847 Score = 103 bits (52), Expect = 7e-19 Identities = 124/148 (83%) Strand = Plus / Minus Query: 359 tacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttccc 418 ||||||||| ||||| | ||||||||||||||| ||| ||| || ||||| ||||| || Sbjct: 28309393 tacctttgcgaactcattctccaaattgtctataagtcgctgctgagctttggctttgcc 28309334 Query: 419 catcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggcagc 478 |||||||| |||||| | ||||| | ||| |||||||||| ||||| |||||||| || Sbjct: 28309333 catcatcgcaggcatctccttcttcaaatgaccaattatatgggcatgaatcttggctgc 28309274 Query: 479 tctagcacgtttgacgaattcattgatc 506 ||| |||||||| || |||||||||||| Sbjct: 28309273 tcttgcacgtttaacaaattcattgatc 28309246
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 147 bits (74), Expect = 5e-32 Identities = 111/122 (90%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 513 tcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctctttctc 572 |||||||||||||| ||||||||||| ||||||||||| |||||||| |||||| |||| Sbjct: 21737 tcacaagctttcttcggtatatctttcagatcagaaagt-agatcatcttgctctctctc 21679 Query: 573 aaatagttcctttccaatcgggccaacagctgattcctttactggtttatcattgaatga 632 |||||||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| Sbjct: 21678 aaatagttcctttccaattggaccaacagctgattcatttactggtttgtcattaaatga 21619 Query: 633 tc 634 || Sbjct: 21618 tc 21617 Score = 143 bits (72), Expect = 8e-31 Identities = 159/188 (84%) Strand = Plus / Minus Query: 176 tcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtc 235 ||||||||| |||||||||||||||||||| || || || |||||||| || ||||| || Sbjct: 22612 tcactcgtatgggttcctgaagttcttgaggagttctggaatgtcgtatccaagcatatc 22553 Query: 236 gtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcc 295 ||||||||||| | |||||||||||| | ||||| |||||||| ||||| ||||| || Sbjct: 22552 atccaccgcctgcaccatcttgggcttgattttctcaaacttgtcaatgctatacccacc 22493 Query: 296 caatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttccct 355 || | |||||||| |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 22492 caggacatctctgaaatgctccacataagggaaatctccagctggaagatgttgttccct 22433 Query: 356 ttgtacct 363 ||| |||| Sbjct: 22432 ttggacct 22425 Score = 103 bits (52), Expect = 7e-19 Identities = 124/148 (83%) Strand = Plus / Minus Query: 359 tacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttccc 418 ||||||||| ||||| | ||||||||||||||| ||| ||| || ||||| ||||| || Sbjct: 21971 tacctttgcgaactcattctccaaattgtctataagtcgctgctgagctttggctttgcc 21912 Query: 419 catcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggcagc 478 |||||||| |||||| | ||||| | ||| |||||||||| ||||| |||||||| || Sbjct: 21911 catcatcgcaggcatctccttcttcaaatgaccaattatatgggcatgaatcttggctgc 21852 Query: 479 tctagcacgtttgacgaattcattgatc 506 ||| |||||||| || |||||||||||| Sbjct: 21851 tcttgcacgtttaacaaattcattgatc 21824
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 147 bits (74), Expect = 5e-32 Identities = 111/122 (90%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 513 tcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctctttctc 572 |||||||||||||| ||||||||||| ||||||||||| |||||||| |||||| |||| Sbjct: 107188 tcacaagctttcttcggtatatctttcagatcagaaagt-agatcatcttgctctctctc 107130 Query: 573 aaatagttcctttccaatcgggccaacagctgattcctttactggtttatcattgaatga 632 |||||||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| Sbjct: 107129 aaatagttcctttccaattggaccaacagctgattcatttactggtttgtcattaaatga 107070 Query: 633 tc 634 || Sbjct: 107069 tc 107068 Score = 143 bits (72), Expect = 8e-31 Identities = 159/188 (84%) Strand = Plus / Minus Query: 176 tcactcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtc 235 ||||||||| |||||||||||||||||||| || || || |||||||| || ||||| || Sbjct: 108063 tcactcgtatgggttcctgaagttcttgaggagttctggaatgtcgtatccaagcatatc 108004 Query: 236 gtccaccgcctggatcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcc 295 ||||||||||| | |||||||||||| | ||||| |||||||| ||||| ||||| || Sbjct: 108003 atccaccgcctgcaccatcttgggcttgattttctcaaacttgtcaatgctatacccacc 107944 Query: 296 caatgcttctctgaagtgctccacgtaagggaaatctcctgcggggagatgatgttccct 355 || | |||||||| |||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 107943 caggacatctctgaaatgctccacataagggaaatctccagctggaagatgttgttccct 107884 Query: 356 ttgtacct 363 ||| |||| Sbjct: 107883 ttggacct 107876 Score = 103 bits (52), Expect = 7e-19 Identities = 124/148 (83%) Strand = Plus / Minus Query: 359 tacctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttccc 418 ||||||||| ||||| | ||||||||||||||| ||| ||| || ||||| ||||| || Sbjct: 107422 tacctttgcgaactcattctccaaattgtctataagtcgctgctgagctttggctttgcc 107363 Query: 419 catcatcgaaggcatttgattctttagatgcccaattatataagcatgtatcttggcagc 478 |||||||| |||||| | ||||| | ||| |||||||||| ||||| |||||||| || Sbjct: 107362 catcatcgcaggcatctccttcttcaaatgaccaattatatgggcatgaatcttggctgc 107303 Query: 479 tctagcacgtttgacgaattcattgatc 506 ||| |||||||| || |||||||||||| Sbjct: 107302 tcttgcacgtttaacaaattcattgatc 107275
>ref|XM_474282.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1629 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 180 tcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtcc 239 ||||| |||||||||||| ||||||| || || |||||||||||| ||||||||||||| Sbjct: 1625 tcgtaggggttcctgaagctcttgaggagatcggggatgtcgtaggcgagcatgtcgtcg 1566 Query: 240 accgcctggatcatcttgggcttcaccttctcgaacttgtcga 282 || |||| | || ||||||||||| | ||||||||||||||| Sbjct: 1565 acgccctgcaccagcttgggcttcagcctctcgaacttgtcga 1523
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 180 tcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtcc 239 ||||| |||||||||||| ||||||| || || |||||||||||| ||||||||||||| Sbjct: 87067 tcgtaggggttcctgaagctcttgaggagatcggggatgtcgtaggcgagcatgtcgtcg 87008 Query: 240 accgcctggatcatcttgggcttcaccttctcgaacttgtcga 282 || |||| | || ||||||||||| | ||||||||||||||| Sbjct: 87007 acgccctgcaccagcttgggcttcagcctctcgaacttgtcga 86965
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 180 tcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtcc 239 ||||| |||||||||||| ||||||| || || |||||||||||| ||||||||||||| Sbjct: 34175685 tcgtaggggttcctgaagctcttgaggagatcggggatgtcgtaggcgagcatgtcgtcg 34175626 Query: 240 accgcctggatcatcttgggcttcaccttctcgaacttgtcga 282 || |||| | || ||||||||||| | ||||||||||||||| Sbjct: 34175625 acgccctgcaccagcttgggcttcagcctctcgaacttgtcga 34175583
>dbj|AK071148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081M19, full insert sequence Length = 2000 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 180 tcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtcc 239 ||||| |||||||||||| ||||||| || || |||||||||||| ||||||||||||| Sbjct: 1739 tcgtaggggttcctgaagctcttgaggagatcggggatgtcgtaggcgagcatgtcgtcg 1680 Query: 240 accgcctggatcatcttgggcttcaccttctcgaacttgtcga 282 || |||| | || ||||||||||| | ||||||||||||||| Sbjct: 1679 acgccctgcaccagcttgggcttcagcctctcgaacttgtcga 1637
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 180 tcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtcc 239 ||||| |||||||||||| ||||||| || || |||||||||||| ||||||||||||| Sbjct: 91997 tcgtaggggttcctgaagctcttgaggagatcggggatgtcgtaggcgagcatgtcgtcg 91938 Query: 240 accgcctggatcatcttgggcttcaccttctcgaacttgtcga 282 || |||| | || ||||||||||| | ||||||||||||||| Sbjct: 91937 acgccctgcaccagcttgggcttcagcctctcgaacttgtcga 91895
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 180 tcgtaagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtcc 239 ||||| |||||||||||| ||||||| || || |||||||||||| ||||||||||||| Sbjct: 26367 tcgtaggggttcctgaagctcttgaggagatcggggatgtcgtaggcgagcatgtcgtcg 26308 Query: 240 accgcctggatcatcttgggcttcaccttctcgaacttgtcga 282 || |||| | || ||||||||||| | ||||||||||||||| Sbjct: 26307 acgccctgcaccagcttgggcttcagcctctcgaacttgtcga 26265
>ref|NM_112920.2| Arabidopsis thaliana calcium ion binding AT3G20290 transcript variant AT3G20290.1 mRNA, complete cds Length = 1990 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 345 tgatgttccctttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgg 404 ||||| || |||||||||||| |||||||||| ||||| || ||||| ||||||||||| Sbjct: 1599 tgatgctctctttgtacctttccaaactcgtcttccaagttatctatcagtttctgttga 1540 Query: 405 gctttagctttccccatcatcgaaggcatttgattctttagatgcccaattatataagca 464 ||||| ||||||||||| |||| ||||| | ||||| | ||| | || || || ||| Sbjct: 1539 gctttggctttccccattatcgctggcatctccttcttcaaatggctgatgatgtacgca 1480 Query: 465 tgtatcttggcagctctagcacgtttgacgaattcattgatcctgcgatcacaagctttc 524 |||||||| || ||||| || ||||| || || ||||| || | ||||||||||||||| Sbjct: 1479 tgtatctttgctgctcttgcccgtttcacaaactcatttattcgacgatcacaagctttc 1420 Query: 525 tt 526 || Sbjct: 1419 tt 1418
>ref|NM_001035654.1| Arabidopsis thaliana calcium ion binding AT3G20290 transcript variant AT3G20290.2 mRNA, complete cds Length = 2006 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 345 tgatgttccctttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgg 404 ||||| || |||||||||||| |||||||||| ||||| || ||||| ||||||||||| Sbjct: 1597 tgatgctctctttgtacctttccaaactcgtcttccaagttatctatcagtttctgttga 1538 Query: 405 gctttagctttccccatcatcgaaggcatttgattctttagatgcccaattatataagca 464 ||||| ||||||||||| |||| ||||| | ||||| | ||| | || || || ||| Sbjct: 1537 gctttggctttccccattatcgctggcatctccttcttcaaatggctgatgatgtacgca 1478 Query: 465 tgtatcttggcagctctagcacgtttgacgaattcattgatcctgcgatcacaagctttc 524 |||||||| || ||||| || ||||| || || ||||| || | ||||||||||||||| Sbjct: 1477 tgtatctttgctgctcttgcccgtttcacaaactcatttattcgacgatcacaagctttc 1418 Query: 525 tt 526 || Sbjct: 1417 tt 1416
>gb|AY034911.1| Arabidopsis thaliana unknown protein (At3g20290) mRNA, complete cds Length = 1946 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 345 tgatgttccctttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgg 404 ||||| || |||||||||||| |||||||||| ||||| || ||||| ||||||||||| Sbjct: 1599 tgatgctctctttgtacctttccaaactcgtcttccaagttatctatcagtttctgttga 1540 Query: 405 gctttagctttccccatcatcgaaggcatttgattctttagatgcccaattatataagca 464 ||||| ||||||||||| |||| ||||| | ||||| | ||| | || || || ||| Sbjct: 1539 gctttggctttccccattatcgctggcatctccttcttcaaatggctgatgatgtacgca 1480 Query: 465 tgtatcttggcagctctagcacgtttgacgaattcattgatcctgcgatcacaagctttc 524 |||||||| || ||||| || ||||| || || ||||| || | ||||||||||||||| Sbjct: 1479 tgtatctttgctgctcttgcccgtttcacaaactcatttattcgacgatcacaagctttc 1420 Query: 525 tt 526 || Sbjct: 1419 tt 1418
>gb|BT004414.1| Arabidopsis thaliana clone U09910 unknown protein (At3g20290) mRNA, complete cds Length = 1669 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 345 tgatgttccctttgtacctttgcaaactcgtcctccaaattgtctatgagtttctgttgg 404 ||||| || |||||||||||| |||||||||| ||||| || ||||| ||||||||||| Sbjct: 1469 tgatgctctctttgtacctttccaaactcgtcttccaagttatctatcagtttctgttga 1410 Query: 405 gctttagctttccccatcatcgaaggcatttgattctttagatgcccaattatataagca 464 ||||| ||||||||||| |||| ||||| | ||||| | ||| | || || || ||| Sbjct: 1409 gctttggctttccccattatcgctggcatctccttcttcaaatggctgatgatgtacgca 1350 Query: 465 tgtatcttggcagctctagcacgtttgacgaattcattgatcctgcgatcacaagctttc 524 |||||||| || ||||| || ||||| || || ||||| || | ||||||||||||||| Sbjct: 1349 tgtatctttgctgctcttgcccgtttcacaaactcatttattcgacgatcacaagctttc 1290 Query: 525 tt 526 || Sbjct: 1289 tt 1288
>dbj|AB024036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC12 Length = 87799 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 360 acctttgcaaactcgtcctccaaattgtctatgagtttctgttgggctttagctttcccc 419 |||||| |||||||||| ||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct: 12312 acctttccaaactcgtcttccaagttatctatcagtttctgttgagctttggctttcccc 12371 Query: 420 atcatcg 426 || |||| Sbjct: 12372 attatcg 12378
>emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d20, COMPLETE SEQUENCE Length = 131814 Score = 58.0 bits (29), Expect = 4e-05 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 510 cgatcacaagctttctttggtatatcttttagatcagaaagggagatcatcctgctcttt 569 ||||||||||| ||||||||||||||| ||||| |||| | || || ||||| ||||| Sbjct: 60787 cgatcacaagccgcctttggtatatctttaagatctgaaa-gaaggtcttcctgttcttt 60729 Query: 570 ctcaaatagttcctttccaat 590 ||||| |||||||||||||| Sbjct: 60728 ttcaaacagttcctttccaat 60708 Score = 48.1 bits (24), Expect = 0.036 Identities = 102/128 (79%) Strand = Plus / Minus Query: 379 ccaaattgtctatgagtttctgttgggctttagctttccccatcatcgaaggcatttgat 438 ||||||| || || ||||| || || ||||||||||| |||||||| | |||||| | | Sbjct: 61251 ccaaattatcaattagtttttgctgagctttagcttttcccatcattgcaggcatctcct 61192 Query: 439 tctttagatgcccaattatataagcatgtatcttggcagctctagcacgtttgacgaatt 498 | || ||||| | || || ||||||||||||||||| || | || ||||| || |||| Sbjct: 61191 ttttaagatgactgataatgtaagcatgtatcttggctgcccgggctcgttttacaaatt 61132 Query: 499 cattgatc 506 |||||||| Sbjct: 61131 cattgatc 61124
>ref|NM_116790.2| Arabidopsis thaliana calcium ion binding AT4G05520 transcript variant AT4G05520.1 mRNA, complete cds Length = 1741 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaacagctgattccttt 612 ||||||| |||||||||||||| ||||| || |||||||| ||||| || ||| ||| Sbjct: 1269 agatcattttgctctttctcaaagagttctttcccaatcggtccaactgcaacttcgttt 1210 Query: 613 actggtttatcattgaatgatccaatata 641 | ||||| |||||||| || |||||||| Sbjct: 1209 atgggtttgtcattgaaggacccaatata 1181
>ref|NM_202788.1| Arabidopsis thaliana calcium ion binding AT4G05520 transcript variant AT4G05520.2 mRNA, complete cds Length = 1805 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaacagctgattccttt 612 ||||||| |||||||||||||| ||||| || |||||||| ||||| || ||| ||| Sbjct: 1330 agatcattttgctctttctcaaagagttctttcccaatcggtccaactgcaacttcgttt 1271 Query: 613 actggtttatcattgaatgatccaatata 641 | ||||| |||||||| || |||||||| Sbjct: 1270 atgggtttgtcattgaaggacccaatata 1242
>emb|BX826880.1|CNS0A3BO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaacagctgattccttt 612 ||||||| |||||||||||||| ||||| || |||||||| ||||| || ||| ||| Sbjct: 1381 agatcattttgctctttctcaaagagttctttcccaatcggtccaactgcaacttcgttt 1322 Query: 613 actggtttatcattgaatgatccaatata 641 | ||||| |||||||| || |||||||| Sbjct: 1321 atgggtttgtcattgaaggacccaatata 1293
>emb|BX827410.1|CNS0A2T0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1742 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaacagctgattccttt 612 ||||||| |||||||||||||| ||||| || |||||||| ||||| || ||| ||| Sbjct: 1270 agatcattttgctctttctcaaagagttctttcccaatcggtccaactgcaacttcgttt 1211 Query: 613 actggtttatcattgaatgatccaatata 641 | ||||| |||||||| || |||||||| Sbjct: 1210 atgggtttgtcattgaaggacccaatata 1182
>emb|BX827790.1|CNS0A2BY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1803 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaacagctgattccttt 612 ||||||| |||||||||||||| ||||| || |||||||| ||||| || ||| ||| Sbjct: 1328 agatcattttgctctttctcaaagagttctttcccaatcggtccaactgcaacttcgttt 1269 Query: 613 actggtttatcattgaatgatccaatata 641 | ||||| |||||||| || |||||||| Sbjct: 1268 atgggtttgtcattgaaggacccaatata 1240
>dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39G20, TM0353a, complete sequence Length = 78736 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Minus Query: 459 taagcatgtatcttggcagctctagcacgtttgacgaattcattgatc 506 ||||||||||||||||| |||| || ||||| || |||||||||||| Sbjct: 39945 taagcatgtatcttggctgctcgggctcgttttacaaattcattgatc 39898 Score = 48.1 bits (24), Expect = 0.036 Identities = 84/104 (80%) Strand = Plus / Minus Query: 183 taagggttcctgaagttcttgagcagctccgggatgtcgtagccgagcatgtcgtccacc 242 ||||| || ||||||||||| |||||||| || || || || || |||||||| || || Sbjct: 26722 taaggatttctgaagttctttagcagctcaggtatttcatatccaagcatgtcatctacg 26663 Query: 243 gcctggatcatcttgggcttcaccttctcgaacttgtcgatgct 286 || || ||||| |||||||| | ||||| || ||||||||||| Sbjct: 26662 gcttgaatcattttgggctttagtttctcaaatttgtcgatgct 26619
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaac 599 ||||||| |||||||||||||| ||||| || |||||||| ||||| Sbjct: 145530 agatcattttgctctttctcaaagagttctttcccaatcggtccaac 145484
>gb|AF147263.1|T1J24 Arabidopsis thaliana BAC T1J24 Length = 122529 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 553 agatcatcctgctctttctcaaatagttcctttccaatcgggccaac 599 ||||||| |||||||||||||| ||||| || |||||||| ||||| Sbjct: 90339 agatcattttgctctttctcaaagagttctttcccaatcggtccaac 90385
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 agctttctttggtatatctttt 539 |||||||||||||||||||||| Sbjct: 133601 agctttctttggtatatctttt 133622
>dbj|AP002469.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-266E8, complete sequence Length = 158977 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 598 acagctgattcctttactggtt 619 |||||||||||||||||||||| Sbjct: 82881 acagctgattcctttactggtt 82860
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 518 agctttctttggtatatctttt 539 |||||||||||||||||||||| Sbjct: 51286 agctttctttggtatatctttt 51307
>ref|XM_510639.1| PREDICTED: Pan troglodytes similar to EH-domain containing protein 4 (FKSG7 protein) (Hepatocellular carcinoma-associated protein 10/11) (LOC453708), mRNA Length = 1167 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 518 agcatgttgtccactgcctcgatcagcttgggcttca 482
>gb|BC083175.1| Rattus norvegicus EH-domain containing 4, mRNA (cDNA clone MGC:91469 IMAGE:7105816), complete cds Length = 3457 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1169 agcatgttgtccacagcctcgatcagcttgggcttca 1133
>gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome 18, complete sequence Length = 239075 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 ttgagccattgcttctggctcttat 54 ||||||||| ||||||||||||||| Sbjct: 42031 ttgagccatggcttctggctcttat 42007
>gb|BC012272.1| Mus musculus EH-domain containing 4, mRNA (cDNA clone MGC:19417 IMAGE:3485836), complete cds Length = 3351 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1199 agcatgttgtccacagcctcgatcagcttgggcttca 1163
>gb|BC051823.1| Homo sapiens EH-domain containing 4, mRNA (cDNA clone MGC:60080 IMAGE:4944876), complete cds Length = 2901 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1220 agcatgttgtccactgcctcgatcagcttgggcttca 1184
>ref|NM_133838.2| Mus musculus EH-domain containing 4 (Ehd4), mRNA Length = 3452 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1306 agcatgttgtccacagcctcgatcagcttgggcttca 1270
>ref|NM_139265.2| Homo sapiens EH-domain containing 4 (EHD4), mRNA Length = 2941 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1216 agcatgttgtccactgcctcgatcagcttgggcttca 1180
>ref|XM_845924.1| PREDICTED: Canis familiaris similar to EH-domain containing protein 4 (Hepatocellular carcinoma-associated protein 10/11) (LOC608795), mRNA Length = 1669 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| ||| ||||||| ||||| ||||||||||| Sbjct: 1209 agcatgttgtctaccgcctcgatcagcttgggcttca 1173
>gb|BC077716.1| Homo sapiens cDNA clone IMAGE:5020413, containing frame-shift errors Length = 2882 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1198 agcatgttgtccactgcctcgatcagcttgggcttca 1162
>emb|AL354707.17| Human DNA sequence from clone RP11-390F4 on chromosome 9 Contains the 5' end of a ring finger protein 2 (RNF2) pseudogene, the 3' end of a novel gene, a 60S ribosomal protein L35a (RPL35A) pseudogene, three novel genes, a gene similar to small nuclear ribonucleoprotein polypeptide E (SNRPE), the 5' end of the JMJD2C gene for jumonji domain containing 2C, a chromosome 20 open reading frame 45 (C20orf45) pseudogene and six CpG islands, complete sequence Length = 170970 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 452 aattatataagcatgtatctt 472 ||||||||||||||||||||| Sbjct: 148262 aattatataagcatgtatctt 148282
>emb|CR378675.1| Photobacterium profundum SS9 chromosome 2; segment 1/7 Length = 349544 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 gtttatcattgaatgatccaa 637 ||||||||||||||||||||| Sbjct: 196984 gtttatcattgaatgatccaa 197004
>gb|BC007480.1| Mus musculus EH-domain containing 4, mRNA (cDNA clone MGC:7570 IMAGE:3493227), complete cds Length = 3452 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1306 agcatgttgtccacagcctcgatcagcttgggcttca 1270
>gb|AY531967.1| Cordyceps bassiana isolate Sc2533 translation elongation factor 1 alpha gene, partial cds Length = 1696 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 accttctcgaacttgtcgatg 284 ||||||||||||||||||||| Sbjct: 277 accttctcgaacttgtcgatg 257
>gb|AY094093.1| Rattus norvegicus pincher mRNA, complete cds Length = 3438 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1187 agcatgttgtccacagcctcgatcagcttgggcttca 1151
>dbj|AK147186.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920195M13 product:EH-domain containing 4, full insert sequence Length = 3650 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1218 agcatgttgtccacagcctcgatcagcttgggcttca 1182
>dbj|AK149760.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530015G05 product:EH-domain containing 4, full insert sequence Length = 2439 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1209 agcatgttgtccacagcctcgatcagcttgggcttca 1173
>dbj|AK159235.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420011E07 product:EH-domain containing 4, full insert sequence Length = 3357 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1227 agcatgttgtccacagcctcgatcagcttgggcttca 1191
>gb|AF454953.1|AF454953 Homo sapiens EH domain-containing protein-4 mRNA, complete cds Length = 2890 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1216 agcatgttgtccactgcctcgatcagcttgggcttca 1180
>dbj|AK159597.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025G01 product:EH-domain containing 4, full insert sequence Length = 2450 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1226 agcatgttgtccacagcctcgatcagcttgggcttca 1190
>dbj|AK166101.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730038N20 product:EH-domain containing 4, full insert sequence Length = 1965 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1277 agcatgttgtccacagcctcgatcagcttgggcttca 1241
>dbj|AK169343.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920188H22 product:EH-domain containing 4, full insert sequence Length = 2624 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1277 agcatgttgtccacagcctcgatcagcttgggcttca 1241
>gb|AF307137.1|AF307137 Homo sapiens EH domain-containing protein FKSG7 (FKSG7) mRNA, complete cds Length = 1985 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1217 agcatgttgtccactgcctcgatcagcttgggcttca 1181
>gb|AF323924.1|AF323924 Homo sapiens hepatocellular carcinoma-associated protein HCA11 mRNA, complete cds Length = 2065 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1225 agcatgttgtccactgcctcgatcagcttgggcttca 1189
>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete sequence Length = 176708 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 25570 agcatgttgtccactgcctcgatcagcttgggcttca 25606
>gb|AF173639.1|AF173639 Mus musculus EH domain containing protein MPAST2 (Past2) mRNA, complete cds Length = 3339 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1182 agcatgttgtccacagcctcgatcagcttgggcttca 1146
>ref|NM_139324.1| Rattus norvegicus EH-domain containing 4 (Ehd4), mRNA Length = 3438 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1187 agcatgttgtccacagcctcgatcagcttgggcttca 1151
>gb|AF527754.1| Takifugu rubripes hypothetical protein gene, partial cds; and twist neighbor (Twistnb), nephew of atonal 3 (Nato3), twist, sorting nexin 13 (Snx13), biotinidase precursor (Btd), and hypothetical protein genes, complete cds Length = 59563 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 555 atcatcctgctctttctcaaa 575 ||||||||||||||||||||| Sbjct: 17702 atcatcctgctctttctcaaa 17682
>dbj|AK218620.1| Mus musculus cDNA, clone:Y2G0145M08, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000028755, based on BLAT search Length = 391 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 314 agcatgttgtccacagcctcgatcagcttgggcttca 278
>gb|AF181265.1|AF181265 Homo sapiens EH domain containing 4 (EHD4) mRNA, partial cds Length = 2505 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 989 agcatgttgtccactgcctcgatcagcttgggcttca 953
>dbj|AK024902.1| Homo sapiens cDNA: FLJ21249 fis, clone COL01244, highly similar to AF181265 Homo sapiens EH domain containing 4 (EHD4) mRNA Length = 2104 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 419 agcatgttgtccactgcctcgatcagcttgggcttca 383
>gb|BC006287.2| Homo sapiens EH-domain containing 4, mRNA (cDNA clone MGC:10536 IMAGE:3958645), complete cds Length = 2941 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1216 agcatgttgtccactgcctcgatcagcttgggcttca 1180
>dbj|AB239916.1| Mus musculus ehd4 mRNA for EH-domain containing 4-KJR, partial cds Length = 1645 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1177 agcatgttgtccacagcctcgatcagcttgggcttca 1141
>dbj|AB239915.1| Mus musculus ehd4 mRNA for EH-domain containing 4, partial cds Length = 1645 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 1177 agcatgttgtccacagcctcgatcagcttgggcttca 1141
>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete sequence Length = 194045 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 228 agcatgtcgtccaccgcctggatcatcttgggcttca 264 ||||||| |||||| |||| ||||| ||||||||||| Sbjct: 96423 agcatgttgtccacagcctcgatcagcttgggcttca 96387
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 caccgcctggatcatcttgg 258 |||||||||||||||||||| Sbjct: 591779 caccgcctggatcatcttgg 591760
>ref|NM_001030894.1| Gallus gallus TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa (TAF12), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tctgttgggctttagctttc 416 |||||||||||||||||||| Sbjct: 156 tctgttgggctttagctttc 137
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 tgctctttctcaaatagttccttt 585 |||||||| ||||||||||||||| Sbjct: 186404 tgctctttttcaaatagttccttt 186427
>gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete sequence Length = 186585 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gcatttgattctttagatgc 449 |||||||||||||||||||| Sbjct: 124409 gcatttgattctttagatgc 124428
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 tgctctttctcaaatagttccttt 585 |||||||| ||||||||||||||| Sbjct: 84264 tgctctttttcaaatagttccttt 84287
>gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosome 9, complete sequence Length = 192991 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ctttggtatatcttttagat 543 |||||||||||||||||||| Sbjct: 117321 ctttggtatatcttttagat 117340
>gb|AC121236.18| Medicago truncatula clone mth2-12m19, complete sequence Length = 124839 Score = 40.1 bits (20), Expect = 8.8 Identities = 56/68 (82%) Strand = Plus / Minus Query: 249 atcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcccaatgcttctctg 308 |||||||| ||||||| ||||| || ||||| ||||| || || | ||| |||||||| Sbjct: 43218 atcatctttggcttcagtttctcaaatttgtcaatgctataaccactcaaaacttctctg 43159 Query: 309 aagtgctc 316 |||||||| Sbjct: 43158 aagtgctc 43151
>gb|AC151964.12| Medicago truncatula clone mth2-47g17, complete sequence Length = 117929 Score = 40.1 bits (20), Expect = 8.8 Identities = 56/68 (82%) Strand = Plus / Minus Query: 249 atcatcttgggcttcaccttctcgaacttgtcgatgctgtacccgcccaatgcttctctg 308 |||||||| ||||||| ||||| || ||||| ||||| || || | ||| |||||||| Sbjct: 6284 atcatctttggcttcagtttctcaaatttgtcaatgctataaccactcaaaacttctctg 6225 Query: 309 aagtgctc 316 |||||||| Sbjct: 6224 aagtgctc 6217
>emb|AL645862.14| Mouse DNA sequence from clone RP23-223A11 on chromosome 11, complete sequence Length = 176011 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 tcttattcatacagttacacaaca 72 ||||||||||||||| |||||||| Sbjct: 28861 tcttattcatacagtgacacaaca 28838
>emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 in linkage group 18, complete sequence Length = 95339 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 tatatcttttagatcagaaa 549 |||||||||||||||||||| Sbjct: 89443 tatatcttttagatcagaaa 89462
>emb|AJ719961.1| Gallus gallus mRNA for hypothetical protein, clone 8m22 Length = 1086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tctgttgggctttagctttc 416 |||||||||||||||||||| Sbjct: 156 tctgttgggctttagctttc 137
>emb|BX321921.11| Zebrafish DNA sequence from clone DKEYP-114B5 in linkage group 16, complete sequence Length = 134141 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tacacaacaatgggtacaaa 83 |||||||||||||||||||| Sbjct: 130048 tacacaacaatgggtacaaa 130029
>gb|AF346833.1|AF346833 Mentha x piperita menthofuran synthase mRNA, complete cds Length = 1773 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gggatgtcgtagccgagcat 232 |||||||||||||||||||| Sbjct: 1145 gggatgtcgtagccgagcat 1126
>emb|CR389031.1| Gallus gallus finished cDNA, clone ChEST823l17 Length = 946 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tctgttgggctttagctttc 416 |||||||||||||||||||| Sbjct: 136 tctgttgggctttagctttc 117
>gb|AC105036.14| Homo sapiens chromosome 15, clone CTD-2323K18, complete sequence Length = 144333 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 tgagccattgcttctggctcttattcat 58 ||||||||||| ||||||||||||||| Sbjct: 129041 tgagccattgcacctggctcttattcat 129014
>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147895 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tccaaattgtctatgagttt 397 |||||||||||||||||||| Sbjct: 111553 tccaaattgtctatgagttt 111534
>emb|BX930954.1| Gallus gallus finished cDNA, clone ChEST62h17 Length = 1149 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tctgttgggctttagctttc 416 |||||||||||||||||||| Sbjct: 232 tctgttgggctttagctttc 213
>emb|BX932588.1| Gallus gallus finished cDNA, clone ChEST596n22 Length = 1056 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tctgttgggctttagctttc 416 |||||||||||||||||||| Sbjct: 139 tctgttgggctttagctttc 120
>emb|BX930386.1| Gallus gallus finished cDNA, clone ChEST630a22 Length = 1033 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tctgttgggctttagctttc 416 |||||||||||||||||||| Sbjct: 138 tctgttgggctttagctttc 119
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 caccgcctggatcatcttgg 258 |||||||||||||||||||| Sbjct: 1085189 caccgcctggatcatcttgg 1085170
>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18, complete sequence Length = 130348 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tatatcttttagatcagaaa 549 |||||||||||||||||||| Sbjct: 101156 tatatcttttagatcagaaa 101137
>emb|AL772272.14| Mouse DNA sequence from clone RP23-369I8 on chromosome 4, complete sequence Length = 129858 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 559 tcctgctctttctcaaatagttcc 582 ||||| |||||||||||||||||| Sbjct: 113573 tcctgatctttctcaaatagttcc 113596
>gb|AC165416.12| Mus musculus chromosome 3, clone RP23-86I19, complete sequence Length = 130155 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gcttctctgaagtgctccac 319 |||||||||||||||||||| Sbjct: 5319 gcttctctgaagtgctccac 5338
>gb|AC151309.2| Xenopus tropicalis clone CH216-97A24, complete sequence Length = 103750 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 ttagatgcccaattatataagcat 465 ||||||||||||||||||| |||| Sbjct: 47713 ttagatgcccaattatatatgcat 47690
>gb|L49409.1|USMPRO Ustilago maydis sid1 DNA promoter Length = 3000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gtagccgagcatgtcgtcca 240 |||||||||||||||||||| Sbjct: 50 gtagccgagcatgtcgtcca 69
>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 562 tgctctttctcaaatagttccttt 585 |||||||| ||||||||||||||| Sbjct: 68640 tgctctttttcaaatagttccttt 68663 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,965,124 Number of Sequences: 3902068 Number of extensions: 4965124 Number of successful extensions: 99861 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99479 Number of HSP's gapped (non-prelim): 372 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
