| Clone Name | rbags12i01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7, complete sequence Length = 147943 Score = 42.1 bits (21), Expect = 0.17 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 atacattacatctacattaca 42 ||||||||||||||||||||| Sbjct: 31606 atacattacatctacattaca 31626
>ref|XM_535858.2| PREDICTED: Canis familiaris similar to spermatogenesis associated 16 (LOC478689), mRNA Length = 2024 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aactactgctgcaccaacg 68 ||||||||||||||||||| Sbjct: 1878 aactactgctgcaccaacg 1896
>emb|AL353052.4| Human DNA sequence from clone RP5-865N13 on chromosome 1 Contains two novel genes, complete sequence Length = 120045 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 acatctacattacaaaaga 47 ||||||||||||||||||| Sbjct: 57145 acatctacattacaaaaga 57127
>emb|BX666059.13| Zebrafish DNA sequence from clone DKEYP-108D9 in linkage group 15, complete sequence Length = 121448 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 atacattacatctacatta 40 ||||||||||||||||||| Sbjct: 63992 atacattacatctacatta 63974
>gb|AC121337.7| Homo sapiens 12 BAC RP11-96H19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110110 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 acatctacattacaaaaga 47 ||||||||||||||||||| Sbjct: 26454 acatctacattacaaaaga 26472
>emb|BX649484.12| Zebrafish DNA sequence from clone CH211-197H24 in linkage group 16, complete sequence Length = 196058 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 tacattacatctacattac 41 ||||||||||||||||||| Sbjct: 167612 tacattacatctacattac 167594
>gb|AC097359.2| Homo sapiens chromosome 3 clone RP11-259K5, complete sequence Length = 187127 Score = 38.2 bits (19), Expect = 2.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 ccatacattacatctacattaca 42 ||||||||||||| ||||||||| Sbjct: 165254 ccatacattacatgtacattaca 165232
>gb|AE009788.1|AE009788 Pyrobaculum aerophilum strain IM2 section 43 of 201 of the complete genome Length = 14715 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 cattacatctacattacaa 43 ||||||||||||||||||| Sbjct: 7543 cattacatctacattacaa 7561
>emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in linkage group 16, complete sequence Length = 192992 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 atacattacatctacatta 40 ||||||||||||||||||| Sbjct: 46197 atacattacatctacatta 46215
>gb|AC136290.2| Homo sapiens chromosome 3 clone CTD-2104B13, complete sequence Length = 136961 Score = 38.2 bits (19), Expect = 2.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 20 ccatacattacatctacattaca 42 ||||||||||||| ||||||||| Sbjct: 83936 ccatacattacatgtacattaca 83958
>emb|AL954684.9| Mouse DNA sequence from clone RP24-352O9 on chromosome 2, complete sequence Length = 170478 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 tacatctacattacaaaag 46 ||||||||||||||||||| Sbjct: 50219 tacatctacattacaaaag 50201
>dbj|AP006190.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-145L6, complete sequence Length = 176082 Score = 38.2 bits (19), Expect = 2.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 ccatacattacatctacattaca 42 ||||||||||||| ||||||||| Sbjct: 134672 ccatacattacatgtacattaca 134650
>dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308, anti-oncogene region, section 1/5 Length = 200000 Score = 38.2 bits (19), Expect = 2.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 ccatacattacatctacattaca 42 ||||||||||||| ||||||||| Sbjct: 21045 ccatacattacatgtacattaca 21023 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 347,458 Number of Sequences: 3902068 Number of extensions: 347458 Number of successful extensions: 19249 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 19231 Number of HSP's gapped (non-prelim): 18 length of query: 68 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 47 effective length of database: 17,151,101,840 effective search space: 806101786480 effective search space used: 806101786480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)