| Clone Name | rbags12h18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete cds Length = 1433 Score = 1241 bits (626), Expect = 0.0 Identities = 626/626 (100%) Strand = Plus / Minus Query: 1 tggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccacc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1242 tggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaacccacc 1183 Query: 61 caactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggcctta 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 caactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtggcctta 1123 Query: 121 ggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 ggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcaccaa 1063 Query: 181 gccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 gccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgatgtc 1003 Query: 241 aggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctgg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 aggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctctgg 943 Query: 301 gttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggttccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 gttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggttccc 883 Query: 361 aatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 aatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccatatc 823 Query: 421 agcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcacc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 agcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcacc 763 Query: 481 acgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 acgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctagg 703 Query: 541 tccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtc 643 Query: 601 gaacatcagtgtctcagctacacgct 626 |||||||||||||||||||||||||| Sbjct: 642 gaacatcagtgtctcagctacacgct 617
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene) Length = 1562 Score = 628 bits (317), Expect = e-177 Identities = 461/509 (90%) Strand = Plus / Minus Query: 118 ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 177 ||||||||| | || ||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232 Query: 178 caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 237 |||||||||||| || |||||||| |||||||| | ||||| ||||| ||||||||||| Sbjct: 1231 caagccgtcacgcagaacgaccttaggctcccaccccagaacttccttcgcctttgtgat 1172 Query: 238 gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 297 ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1171 gtctggcttcctctggcgaggatcatcaggagtgttctcggtcatcgtcactgtcacctc 1112 Query: 298 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggtt 357 ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 1111 tgggttgatcaactctttcactttctcagcaagttccagcatggtaaattcacctgggtt 1052 Query: 358 cccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccat 417 || | ||||| ||||||||||||| ||||||||||||||| |||||||||| ||||| Sbjct: 1051 gcccaaattaatcggtccagtgttgtttccattcatcagcttaataagaccatcaaccat 992 Query: 418 atcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttc 477 ||| || |||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 991 atcggcgacgtagcagaagctcctagtctgtgttcctggcttctggacagtcaaggggtc 932 Query: 478 accacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcct 537 |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 931 accacgcacagcctgagcaatgaagttgctaacaacacgcccatcatcaatgttcatcct 872 Query: 538 aggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggta 597 ||| ||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||| Sbjct: 871 aggcccataggtgttgaaaatccgggcaattcggatttcaatgccatgctgcctgtggta 812 Query: 598 gtcgaacatcagtgtctcagctacacgct 626 ||| |||||||| ||||| |||||||||| Sbjct: 811 gtcaaacatcagcgtctctgctacacgct 783 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 3 gtttattggaactcaaattccgtaacgaaa 32 ||||||||||||||||||||||||| |||| Sbjct: 1381 gtttattggaactcaaattccgtaatgaaa 1352
>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1053 Score = 583 bits (294), Expect = e-163 Identities = 432/478 (90%) Strand = Plus / Minus Query: 149 cgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctcc 208 ||||||||||| || || ||||||||||||||||| ||||| || |||| |||||||||| Sbjct: 1022 cgctcccggaaatcatcttccatgagcaccaagccatcacgcagaacgatcttgggctcc 963 Query: 209 cagtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcagga 268 || | | ||| |||||||||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 962 caccccaaaacttcctttgcctttgtaatgtctggcttcctctgacgaggatcatcagga 903 Query: 269 gtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagca 328 |||||||||||||| || || || |||||||||||||||||||||||||| ||||||||| Sbjct: 902 gtgttctcagtcattgtgacggtaacctctgggttgatcaactccttcacattctcagca 843 Query: 329 agttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctcca 388 ||||||||||||||||||||||||||||| || | ||||| |||||||||||||| || Sbjct: 842 agttccagcatggtgaattcacctgggtttcccaaattaattggtccagtgttgtccccg 783 Query: 389 ttcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgt 448 ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 782 ttcatcagcttaataagaccattaaccatgtcagcaacatagcagaagctcctagtttgt 723 Query: 449 gttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttacta 508 |||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||| Sbjct: 722 gttcctggcttctgaacagtcaggggctcgccacgtacggcctgagcaatgaagttacta 663 Query: 509 acaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaata 568 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 acaacacgcccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatt 603 Query: 569 cggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||||||| ||||| ||||||||||| || || ||||||| Sbjct: 602 cggatctcaatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgct 545
>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full insert sequence Length = 1811 Score = 583 bits (294), Expect = e-163 Identities = 456/510 (89%) Strand = Plus / Minus Query: 117 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 176 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483 Query: 177 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 236 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 1482 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1423 Query: 237 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 296 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1422 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 1363 Query: 297 ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggt 356 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1362 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggt 1303 Query: 357 tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 416 | || | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 1302 ttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacca 1243 Query: 417 tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggctt 476 | |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 1242 tgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcaggggct 1183 Query: 477 caccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 536 | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1182 cgccacgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 1123 Query: 537 taggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggt 596 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 1122 taggtccataggtgttgaaaatcctggcaattcggatctcaatgccatgctgcctgtgat 1063 Query: 597 agtcgaacatcagtgtctcagctacacgct 626 |||| ||||||||||| || || ||||||| Sbjct: 1062 agtcaaacatcagtgtttctgcgacacgct 1033
>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full insert sequence Length = 1411 Score = 583 bits (294), Expect = e-163 Identities = 456/510 (89%) Strand = Plus / Minus Query: 117 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 176 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094 Query: 177 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 236 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 1093 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1034 Query: 237 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 296 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1033 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 974 Query: 297 ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggt 356 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 973 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggt 914 Query: 357 tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 416 | || | ||||| |||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 913 ttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacca 854 Query: 417 tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggctt 476 | |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct: 853 tgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcaggggct 794 Query: 477 caccacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcc 536 | ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 793 cgccacgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcc 734 Query: 537 taggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggt 596 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 733 taggtccataggtgttgaaaatcctggcaattcggatctcaatgccatgctgcctgtgat 674 Query: 597 agtcgaacatcagtgtctcagctacacgct 626 |||| ||||||||||| || || ||||||| Sbjct: 673 agtcaaacatcagtgtttctgcgacacgct 644
>gb|AY104952.1| Zea mays PCO092342 mRNA sequence Length = 1825 Score = 581 bits (293), Expect = e-162 Identities = 455/509 (89%) Strand = Plus / Minus Query: 118 ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 177 ||||||||||| ||||||||||| |||| ||||||||||| || |||||||||||||| Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476 Query: 178 caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 237 ||||||||| ||||||| |||||||||||| | ||||| ||||||||||| ||||| Sbjct: 1475 caagccgtccttcaggacgatcttgggctcccaccctagaacttcctttgccttggtgat 1416 Query: 238 gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 297 ||| |||||||||||||| || ||||||||||||||||| |||||||||||||| | || Sbjct: 1415 gtccggcttcctctggcggggatcatcaggagtgttctcggtcatcgtcactgttatatc 1356 Query: 298 tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcacctgggtt 357 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1355 tgggttaatcaactccttcacattctcagcaagttccagcatggtgaattcacctgggtt 1296 Query: 358 cccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgaccat 417 ||| | |||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| Sbjct: 1295 ccccaagttaatcggtccagtgttgtttccgttcatcagcctaataagaccatcaaccat 1236 Query: 418 atcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttc 477 ||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1235 atcggcgacatagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttc 1176 Query: 478 accacgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcct 537 ||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1175 gccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatcct 1116 Query: 538 aggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggta 597 || |||||||||||||||||||||||||| ||||| |||||||| ||||||||||| || Sbjct: 1115 tggcccataggtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgata 1056 Query: 598 gtcgaacatcagtgtctcagctacacgct 626 |||||||||||| ||||| |||||||||| Sbjct: 1055 gtcgaacatcagcgtctctgctacacgct 1027 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 3 gtttattggaactcaaattccgtaacgaaa 32 ||||||||||||||||||||||||| |||| Sbjct: 1639 gtttattggaactcaaattccgtaatgaaa 1610
>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence Length = 958 Score = 557 bits (281), Expect = e-155 Identities = 428/477 (89%) Strand = Plus / Minus Query: 150 gctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctccc 209 |||||||||| || ||||||||||||||||||||||| | |||| || |||||||||| Sbjct: 787 gctcccggaaatcatcctccatgagcaccaagccgtcccccaggaagattttgggctccc 728 Query: 210 agtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggag 269 | | | ||| ||||| |||||||||| || ||||||||||| || ||||||||||||| Sbjct: 727 atcccaaaacttccttcccctttgtgatatccggcttcctctgacgggggtcatcaggag 668 Query: 270 tgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagcaa 329 ||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 667 tgttctcggtcattgtcactgtcacatctgggttgatcaactccttcacattctcagcaa 608 Query: 330 gttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctccat 389 ||||||||||||||||||||||||||||||| | |||||| |||||||| |||| ||||| Sbjct: 607 gttccagcatggtgaattcacctgggttccccaagttaatcggtccagtcttgtttccat 548 Query: 390 tcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgtg 449 |||||||||| |||||||||| |||||||| ||||| |||||||| ||||||||||||| Sbjct: 547 tcatcagcttaataagaccatcaaccatatcggcaacatagcagaaactcctagtctgtg 488 Query: 450 ttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagttactaa 509 |||||||| ||||||||||||||| ||||| || | ||||||||||||||||| |||| Sbjct: 487 ttcctggcctctggacagtcaggggctcaccgcgcacagcctgagcaatgaagttgctaa 428 Query: 510 caacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggcaatac 569 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 427 caacacggccatcatcaatgttcatcctaggcccataggtgttgaaaatcctggcaatcc 368 Query: 570 ggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||| |||||||| ||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 367 ggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgct 311 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ttggaactcaaattccgtaacgaaa 32 |||||||||||||||||||| |||| Sbjct: 921 ttggaactcaaattccgtaatgaaa 897
>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full insert sequence Length = 472 Score = 180 bits (91), Expect = 4e-42 Identities = 178/207 (85%) Strand = Plus / Minus Query: 117 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 176 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148 Query: 177 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 236 ||||||| ||||| || |||| | |||||||||| | | |||||||||||||||||| | Sbjct: 147 ccaagccatcacgcagaacgatcctgggctcccaccccaaaacctcctttgcctttgtaa 88 Query: 237 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 296 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 87 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 28 Query: 297 ctgggttgatcaactccttcacgttct 323 |||||||||||||||||||||| |||| Sbjct: 27 ctgggttgatcaactccttcacattct 1
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 117 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 176 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233 Query: 177 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 236 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 9412232 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9412173 Query: 237 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 296 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 9412172 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9412113 Query: 297 ctgggttgatcaact 311 ||||||||||||||| Sbjct: 9412112 ctgggttgatcaact 9412098 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 482 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 541 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9411539 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcctaggt 9411480 Query: 542 ccataggtgttgaaaatcctggcaatacggatctc 576 |||||||||||||||||||||||||| |||||||| Sbjct: 9411479 ccataggtgttgaaaatcctggcaattcggatctc 9411445 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 413 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 472 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9411692 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 9411633 Query: 473 g 473 | Sbjct: 9411632 g 9411632 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacct 352 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9412015 ctccttcacattctcagcaagttccagcatggtgaattcacct 9411973 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 365 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 411 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 9411835 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9411789 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 576 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 ||||||| ||||||||||| ||||| ||||||||||| || || ||||||| Sbjct: 9411358 caatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgct 9411308
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 117 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 176 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633 Query: 177 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 236 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 109632 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 109573 Query: 237 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 296 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 109572 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 109513 Query: 297 ctgggttgatcaact 311 ||||||||||||||| Sbjct: 109512 ctgggttgatcaact 109498 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 482 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 541 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 108939 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcctaggt 108880 Query: 542 ccataggtgttgaaaatcctggcaatacggatctc 576 |||||||||||||||||||||||||| |||||||| Sbjct: 108879 ccataggtgttgaaaatcctggcaattcggatctc 108845 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 413 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 472 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 109092 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 109033 Query: 473 g 473 | Sbjct: 109032 g 109032 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacct 352 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109415 ctccttcacattctcagcaagttccagcatggtgaattcacct 109373 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 365 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 411 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 109235 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 109189 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 576 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 ||||||| ||||||||||| ||||| ||||||||||| || || ||||||| Sbjct: 108758 caatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgct 108708
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 117 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 176 ||||||||| | ||||||||||||| | ||||||||||| || || |||||||||| Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354 Query: 177 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 236 ||||||| ||||| || |||| |||||||||||| | | ||| |||||||||||||| | Sbjct: 9410353 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9410294 Query: 237 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 296 |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 9410293 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9410234 Query: 297 ctgggttgatcaact 311 ||||||||||||||| Sbjct: 9410233 ctgggttgatcaact 9410219 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 482 cgtatggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggt 541 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9409660 cgtacggcctgagcaatgaagttactaacaacacgcccatcatcaatgttcatcctaggt 9409601 Query: 542 ccataggtgttgaaaatcctggcaatacggatctc 576 |||||||||||||||||||||||||| |||||||| Sbjct: 9409600 ccataggtgttgaaaatcctggcaattcggatctc 9409566 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 413 accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtcagg 472 ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 9409813 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtcagg 9409754 Query: 473 g 473 | Sbjct: 9409753 g 9409753 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacct 352 ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9410136 ctccttcacattctcagcaagttccagcatggtgaattcacct 9410094 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 365 ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 411 ||||| |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 9409956 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9409910 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 576 caatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 ||||||| ||||||||||| ||||| ||||||||||| || || ||||||| Sbjct: 9409479 caatgccatgctgcctgtgatagtcaaacatcagtgtttctgcgacacgct 9409429
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence Length = 1281 Score = 151 bits (76), Expect = 3e-33 Identities = 229/280 (81%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 867 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 808 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 807 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 748 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || |||||||| | || |||||||||||||| || |||||||| ||||||||| Sbjct: 747 gtcaatgcctcaccacggagtgcttgagcaatgaagttgcttacaacacgtccatcatca 688 Query: 527 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 586 |||||||| | || ||||| |||||||| || |||||||| ||||| ||||| || ||| Sbjct: 687 atgttcatgcgtggaccataagtgttgaagattctggcaatgcggatttcaattccatgc 628 Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 627 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 588 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 987 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 937
>gb|AY619950.1| Nicotiana tabacum UDP-glucuronate decarboxylase 1 mRNA, complete cds Length = 1279 Score = 129 bits (65), Expect = 1e-26 Identities = 248/309 (80%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 369 ||||||||| ||||| || ||||| | ||| |||||||||||||| || ||||||||||| Sbjct: 878 ctccttcacattctccgcgagttcaatcatcgtgaattcacctggatttccaatgttaat 819 Query: 370 gggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgta 429 ||||||||||| ||||| | ||| ||| ||||| |||| ||||| |||| || || Sbjct: 818 tggtccagtgttatctccctccataagccgaataaggccatcaaccatgtcagagacata 759 Query: 430 gcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggc 489 || ||||| | || |||||||||||| ||||||||||| |||||| |||| || || Sbjct: 758 acaaaagctgcgtgtttgtgttcctggcaactggacagtcaacgcttcatcacgaattgc 699 Query: 490 ctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggt 549 || ||||||||||| || |||||||| ||||||||||| ||||| | ||| ||||| || Sbjct: 698 ttgggcaatgaagttgctgacaacacgaccatcatcaatattcattcgaggaccataagt 639 Query: 550 gttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcag 609 ||||| || || ||||| ||||| ||||| || || || ||||| || || ||||||| Sbjct: 638 attgaagattctagcaattcggatttcaattccatgttgtctgtgataatcaaacatcaa 579 Query: 610 tgtctcagc 618 |||||||| Sbjct: 578 agtctcagc 570 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 224 tttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgtt 273 ||||||||||||||||| || || ||||| ||||| ||||| |||||||| Sbjct: 964 tttgcctttgtgatgtccggttttctctgccgaggatcatctggagtgtt 915
>gb|AY922315.1| Populus tomentosa UDP-glucuronic acid decarboxylase 3 (UXS3) mRNA, complete cds Length = 1129 Score = 121 bits (61), Expect = 3e-24 Identities = 253/317 (79%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 369 ||||||||| |||||||||| || |||||| ||||| |||||||| |||||||| || Sbjct: 893 ctccttcactgtctcagcaagctcggtcatggtaaattcccctgggtttccaatgttgat 834 Query: 370 gggtccagtgttgtctccattcatcagcttcataagaccattgaccatatcagcaacgta 429 ||||||||||| ||||| | ||| || ||||| |||| ||||| |||| ||||| Sbjct: 833 tggtccagtgttctctccttccatgaggcgaataaggccatcaaccatgtcagagacgta 774 Query: 430 gcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatggc 489 |||||| || | ||| || ||||| ||||| || || |||| | ||||||||| | || Sbjct: 773 gcagaaactgcgagtttgagttccaggcttttgaactgtcaatggttcaccacgaagtgc 714 Query: 490 ctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggt 549 |||||||||||||| || |||||||| ||||||||||| ||||| | |||||||| || Sbjct: 713 ttgagcaatgaagttgctcacaacacgcccatcatcaatattcatacgcggtccatatgt 654 Query: 550 gttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcag 609 ||||||||| || ||||| || | || || || || ||||| || ||||| ||||||| Sbjct: 653 gttgaaaattctagcaatgcgaaattctatcccatgttgcctatgatagtcaaacatcaa 594 Query: 610 tgtctcagctacacgct 626 ||||||||| ||||||| Sbjct: 593 tgtctcagccacacgct 577 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 222 cctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctc 276 ||||||||||||| |||||||| |||||||| || || ||||||||||| ||||| Sbjct: 981 cctttgcctttgtaatgtcaggtttcctctgtcgtggatcatcaggagtattctc 927
>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.1 mRNA, complete cds Length = 1374 Score = 119 bits (60), Expect = 1e-23 Identities = 225/280 (80%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 931 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 872 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 871 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 812 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 811 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 752 Query: 527 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 586 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 751 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 692 Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 691 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 652 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript variant AT3G46440.2 mRNA, complete cds Length = 1464 Score = 119 bits (60), Expect = 1e-23 Identities = 225/280 (80%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 1021 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 962 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 961 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 902 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 901 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 842 Query: 527 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 586 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 841 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 782 Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 781 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 742 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1141 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1091
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases (At3g46440) mRNA, complete cds Length = 1057 Score = 119 bits (60), Expect = 1e-23 Identities = 225/280 (80%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 806 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 747 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 746 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 687 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 686 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 627 Query: 527 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 586 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 626 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 567 Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 566 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 527 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 926 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 876
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase (At3g46440) mRNA, complete cds Length = 1356 Score = 119 bits (60), Expect = 1e-23 Identities = 225/280 (80%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 931 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 872 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 871 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 812 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 811 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 752 Query: 527 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 586 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 751 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 692 Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 691 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 652 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1211 Score = 111 bits (56), Expect = 3e-21 Identities = 224/280 (80%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 830 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 771 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||| ||||| ||||| ||||| ||| Sbjct: 770 ccatcaaccatgtcagatacataacagaaactgcgagtgtgtgtccctggtttctgaaca 711 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || ||||| || | || || ||||||||||| || ||||||||||||||||| Sbjct: 710 gtcaatgcctcaccccggagtgcttgtgcaatgaagttgcttacaacacggccatcatcg 651 Query: 527 atgttcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtgc 586 |||||||| | || ||||| |||||||| || || ||||| ||||| ||||| || || Sbjct: 650 atgttcatgcgtggaccataagtgttgaagattctagcaatgcggatttcaattccatgt 591 Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 590 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 551 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 950 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 900
>gb|AY963839.1| Cucumis sativus putative nucleotide sugar epimerase mRNA, partial cds Length = 416 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| |||||| ||||||||||| || |||||||| ||||| || |||||||| Sbjct: 384 gcctgagcaaggaagttgctaacaacacgaccgtcatcaatattcattctcggtccatat 325 Query: 548 gtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatc 607 |||||||||||||| ||||| | |||||||| || ||||||||||| || || |||||| Sbjct: 324 gtgttgaaaatcctagcaattcttatctcaatcccatgctgcctgtgataatcaaacatc 265 Query: 608 a 608 | Sbjct: 264 a 264
>gb|AY429442.1| Gossypium barbadense fiber dTDP-glucose 4-6-dehydratase mRNA, partial cds Length = 872 Score = 103 bits (52), Expect = 7e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 ||||||||||| || || |||||||| ||||||||||||||||||| || ||||| ||| Sbjct: 180 tgagcaatgaaattgcttacaacacgcccatcatcaatgttcatccgtggcccatatgtg 121 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 610 ||||| || || ||||| |||||||| || || |||||||| ||||| || ||||| || Sbjct: 120 ttgaagattctagcaatgcggatctctatcccatgctgcctatggtaatcaaacattagg 61 Query: 611 gtctcagctacacgct 626 |||||||| ||||||| Sbjct: 60 gtctcagccacacgct 45 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgttaatgggtccagtgt 380 |||| ||||| || |||||||| ||||||||||| ||||| || || || || ||||||| Sbjct: 350 tctcggcaagctcaagcatggtaaattcacctggattcccgatattgattggaccagtgt 291 Query: 381 t 381 | Sbjct: 290 t 290
>gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete sequence Length = 1418 Score = 103 bits (52), Expect = 7e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 811 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 752 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 610 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 751 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatcaag 692 Query: 611 gtctcagctacacgct 626 || || |||||||||| Sbjct: 691 gtttcggctacacgct 676 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 366 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 981 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 936
>ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE); catalytic AT5G59290 (UXS3) mRNA, complete cds Length = 1459 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 811 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 752 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 608 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 751 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 694 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 366 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 981 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 936
>gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1029 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 665 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 606 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 608 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 605 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 548 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 366 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 835 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 790
>gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds Length = 1364 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 755 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 696 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 608 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 695 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 638 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 366 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 925 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 880
>emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 737 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 678 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 608 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 677 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 620 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 366 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 907 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 862
>gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS3) mRNA, complete cds Length = 1029 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 665 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 606 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatca 608 ||||| || || ||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 605 ttgaagattctagcaatgcggatttcaatgccatgttgtctgtggtagtcaaacatca 548 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 321 tctcagcaagttccagcatggtgaattcacctgggttcccaatgtt 366 ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 835 tctcagccagttccaccattgtgaactcacctgggttaccgatgtt 790
>ref|NM_128436.3| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.1 mRNA, complete cds Length = 1394 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 446 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 505 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 797 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 738 Query: 506 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 565 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 737 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 678 Query: 566 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacg 624 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 677 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacg 619
>ref|NM_201826.1| Arabidopsis thaliana NAD binding / catalytic AT2G28760 transcript variant AT2G28760.2 mRNA, complete cds Length = 1389 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 446 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 505 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 792 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 733 Query: 506 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 565 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 732 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 673 Query: 566 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacg 624 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 672 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacg 614
>gb|AY128899.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1234 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 446 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 505 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 713 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 654 Query: 506 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 565 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 653 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 594 Query: 566 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacg 624 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 593 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacg 535
>gb|AY099703.1| Arabidopsis thaliana putative nucleotide-sugar dehydratase (At2g28760) mRNA, complete cds Length = 1393 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 446 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 505 |||||||| || ||||| |||||||| ||||| || | | ||||||||||||||||| Sbjct: 797 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagttg 738 Query: 506 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 565 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 737 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 678 Query: 566 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacg 624 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 677 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacg 619
>emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4-6-dehydratase Length = 1356 Score = 89.7 bits (45), Expect = 1e-14 Identities = 159/197 (80%) Strand = Plus / Minus Query: 428 tagcagaagctcctagtctgtgttcctggcttctggacagtcagggcttcaccacgtatg 487 |||||||| || | ||| ||||||||||| |||||||||| || ||||||||| | Sbjct: 795 tagcagaaactgcgagtttgtgttcctggagattggacagtcaaggattcaccacgcagt 736 Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 || |||||||||||||| || |||||||| ||||||||||| ||||| | |||||||| Sbjct: 735 gcttgagcaatgaagttgctgacaacacgtccatcatcaatattcatgcgtggtccatat 676 Query: 548 gtgttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatc 607 ||||| || || || |||| ||| || || || ||||||||||| || || || |||||| Sbjct: 675 gtgttaaagattcttgcaacacgtatttctattccgtgctgcctatgataatcaaacatc 616 Query: 608 agtgtctcagctacacg 624 | |||||||| ||||| Sbjct: 615 aaagtctcagccacacg 599 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaa 362 ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 913 ctccttcactgtctcagcaagttcaagcattgtgaattcacctgggtttccaa 861
>emb|BX818916.1|CNS0A9UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 446 tgtgttcctggcttctggacagtcagggcttcaccacgtatggcctgagcaatgaagtta 505 |||||||| || ||||| |||||||| ||||| || | | |||||||||||||||| Sbjct: 776 tgtgttcccggtttctgaacagtcagagcttctcccctgagagcctgagcaatgaagtgg 717 Query: 506 ctaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatcctggca 565 || ||||| || ||||||||||||||||| | ||| ||||| |||||||| ||||| || Sbjct: 716 ctcacaacgcgaccatcatcaatgttcatacgaggaccatatgtgttgaatatcctcgct 657 Query: 566 atacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctcagctacacg 624 || || |||||||| || || ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 656 atgcgtatctcaatcccatgttgcctatggtaatcaaacataagagtctcggcaacacg 598
>gb|U82433.1|PAU82433 Prunus armeniaca thymidine diphospho-glucose 4-6-dehydratase homolog mRNA, partial cds Length = 1012 Score = 83.8 bits (42), Expect = 6e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 497 atgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaa 556 ||||| ||||| |||||||| ||||||||||| ||||| | |||||| || ||||||||| Sbjct: 426 atgaaattactgacaacacgaccatcatcaatattcatgcgaggtccgtaagtgttgaaa 367 Query: 557 atcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagtgtctca 616 ||||| ||||| | ||||| || || ||||||||||| || || ||||||| ||| ||| Sbjct: 366 atcctagcaatccttatctctatcccatgctgcctgtgataatcaaacatcaatgtttca 307 Query: 617 gc 618 || Sbjct: 306 gc 305 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 221 tcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 ||||| || ||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 702 tccttcgcttttgtgatgtcaggcttcctctggcgaggatcatccggcgtgttctca 646 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaatgttaat 369 ||||||||| ||||| ||||| || | ||| || ||||||||||| || |||||||| || Sbjct: 613 ctccttcacattctcggcaagctcgatcattgtaaattcacctggatttccaatgttgat 554 Query: 370 gggtccagtgttgtctcc 387 ||||||||||||||||| Sbjct: 553 cggtccagtgttgtctcc 536
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||||||||||||||| || ||||| || ||||||||||||||||| | ||| ||||| Sbjct: 8484 gcctgagcaatgaagttgctcacaacgcgaccatcatcaatgttcatacgaggaccatat 8543 Query: 548 gtgttgaaaatcct 561 |||||||| ||||| Sbjct: 8544 gtgttgaatatcct 8557
>gb|AY922314.1| Populus tomentosa UDP-glucuronic acid decarboxylase 2 (UXS2) mRNA, complete cds Length = 1466 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| || ||||||||||||||||||||||| ||| ||| | ||||||||| Sbjct: 1038 gcctgagcaacaaaattactaacaacacggccatcatctatgcacattcgaggtccataa 979 Query: 548 gtgttgaaaatcctggcaat 567 || |||||||| |||||||| Sbjct: 978 gtattgaaaattctggcaat 959 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 325 agcaagttccagcatggtgaattcacctgg 354 |||||| || |||||||||||||||||||| Sbjct: 1201 agcaagctcgagcatggtgaattcacctgg 1172
>gb|AY619952.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 3 mRNA, complete cds Length = 1756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Minus Query: 487 ggcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccata 546 ||||||||||| ||||| ||||||||||| |||||||| ||| ||| | ||||||||| Sbjct: 1097 ggcctgagcaacaaagttgctaacaacacgaccatcatcgatgcacatacgaggtccata 1038 Query: 547 ggtgttgaaaatcct 561 ||||||||| ||||| Sbjct: 1037 ggtgttgaagatcct 1023
>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17 Length = 75803 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| |||||||| | ||| ||||| ||| Sbjct: 55725 tgagcaatgaagttgctcacaacacgcccatcatcgatgttcattcgaggaccatatgtg 55784 Query: 551 ttgaaaatcctggcaatacggat 573 ||||| || || ||||| ||||| Sbjct: 55785 ttgaagattctagcaatgcggat 55807
>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 65.9 bits (33), Expect = 1e-07 Identities = 220/281 (78%), Gaps = 1/281 (0%) Strand = Plus / Minus Query: 347 tcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataaga 406 ||||||||||| || ||||| ||||| ||||||| ||||| | ||| || |||||| Sbjct: 756 tcacctgggttaccgatgttgatgggaccagtgtcatctccttccatgaggcgcataagt 697 Query: 407 ccattgaccatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggaca 466 |||| ||||| |||| || || ||||| || | ||||||||| ||||| ||||| ||| Sbjct: 696 ccatcaaccatgtcagatacataacagaaactgcgagtctgtgtccctggtttctgaaca 637 Query: 467 gtcagggcttcaccacgtatggcctgagcaatgaagttactaacaacacggccatcatca 526 |||| || ||||| | | || || ||||||||||| || |||||| |||||||||| Sbjct: 636 gtcaatgcctcacccccgagtgcttgtgcaatgaagttgcttacaacaaggccatcatct 577 Query: 527 atgt-tcatcctaggtccataggtgttgaaaatcctggcaatacggatctcaatgccgtg 585 || | |||| || || ||||| |||||||| || || |||| || |||||||| || | Sbjct: 576 atttctcatgcttggaccataagtgttgaagattctatcaatgcgcatctcaatcccatt 517 Query: 586 ctgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||| || || ||||||| ||||||||| ||||||| Sbjct: 516 ttgcctgtgttattcaaacatcaatgtctcagcaacacgct 476 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 876 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 826
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2); catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2) mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 873 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 872 gtgttgaagatcctagcaat 853 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 873 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 872 gtgttgaagatcctagcaat 853 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 494 gcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttg 553 ||||||||||| || ||||||||||||||||| |||||||| | || ||||| |||||| Sbjct: 76086 gcaatgaagttgcttacaacacggccatcatcgatgttcatgcgtggaccataagtgttg 76145 Query: 554 aaaatcctggcaatacggat 573 || || || ||||| ||||| Sbjct: 76146 aagattctagcaatgcggat 76165 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 587 tgcctgtggtagtcgaacatcagtgtctcagctacacgct 626 |||||||||||||| ||||||| |||||||| ||||||| Sbjct: 76287 tgcctgtggtagtcaaacatcaaggtctcagcaacacgct 76326 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 277 |||||||||||||| ||||||||||| | || ||||| || ||||||||| Sbjct: 75554 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 75604
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1663 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 1085 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 1026 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 1025 gtgttgaagatcctagcaat 1006 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds Length = 1701 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 1085 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 1026 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 1025 gtgttgaagatcctagcaat 1006 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
>emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 923 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 303 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 244 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 243 gtgttgaagatcctagcaat 224 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 564 gcctttgtgatgtcaggctttctcttgtgagggtc 530
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 932 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 873 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 872 gtgttgaagatcctagcaat 853 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases Length = 1660 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 ||||| |||| |||||||||||||||||| |||||||| || ||| || || |||||| Sbjct: 1071 gcctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatag 1012 Query: 548 gtgttgaaaatcctggcaat 567 |||||||| ||||| ||||| Sbjct: 1011 gtgttgaagatcctagcaat 992 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 1332 gcctttgtgatgtcaggctttctcttgtgagggtc 1298
>gb|AY106346.1| Zea mays PCO069392 mRNA sequence Length = 1708 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||||||| |||||||||||||| |||||| ||| | ||| ||||| Sbjct: 1005 gcctgagcaacgaagttactgacaacacggccatcgtcaatgcacatgcgagggccatat 946 Query: 548 gtgttgaa 555 |||||||| Sbjct: 945 gtgttgaa 938
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 |||| |||| |||||||||||||||||| |||||||| || ||| || || ||||||| Sbjct: 87133 cctgtgcaacgaagttactaacaacacgcccatcatctatacacattcttggaccatagg 87074 Query: 549 tgttgaaaatcctggcaat 567 ||||||| ||||| ||||| Sbjct: 87073 tgttgaagatcctagcaat 87055 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 88182 gcctttgtgatgtcaggctttctcttgtgagggtc 88148
>dbj|AK061857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G06, full insert sequence Length = 1057 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 339 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 280 Query: 548 gtgttgaaaatcc 560 ||||| ||||||| Sbjct: 279 gtgttaaaaatcc 267
>gb|AF251077.1|AF251077 Oryza sativa dTDP-glucose 4-6-dehydratase-like protein mRNA, partial cds Length = 773 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 334 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 275 Query: 548 gtgttgaaaatcc 560 ||||| ||||||| Sbjct: 274 gtgttaaaaatcc 262
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1336 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 937 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 878 Query: 548 gtgttgaaaatcc 560 ||||| ||||||| Sbjct: 877 gtgttaaaaatcc 865
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full insert sequence Length = 1820 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| Sbjct: 1064 gcctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatat 1005 Query: 548 gtgttgaaaatcc 560 ||||| ||||||| Sbjct: 1004 gtgttaaaaatcc 992
>dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate carboxy-lyase, complete cds Length = 1406 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 310 ctccttcacgttctcagcaagttccagcatggtgaattcacctgggttcccaa 362 ||||||||| ||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct: 973 ctccttcactgtctcagcaagttcaagcatagtgaattcacccgggtttccaa 921 Score = 52.0 bits (26), Expect = 0.002 Identities = 107/134 (79%) Strand = Plus / Minus Query: 491 tgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccataggtg 550 |||||||||||||| || |||||||| |||||||| || ||||| | || ||||| ||| Sbjct: 792 tgagcaatgaagttgctgacaacacgtccatcatcgatattcatgcgcggcccatatgtg 733 Query: 551 ttgaaaatcctggcaatacggatctcaatgccgtgctgcctgtggtagtcgaacatcagt 610 ||||| || || |||| ||| || || || || ||||| || || || || ||||||| Sbjct: 732 ttgaagattcttgcaacacgtatttctattccatgctgtctatgataatcaaacatcaaa 673 Query: 611 gtctcagctacacg 624 |||||||| ||||| Sbjct: 672 gtctcagcgacacg 659
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 ||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| | Sbjct: 11891009 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 11891068 Query: 549 tgttgaaaatcc 560 |||| ||||||| Sbjct: 11891069 tgttaaaaatcc 11891080 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 326 gcaagttccagcatggtgaattcacctgggtt 357 |||||||||| |||||||||||| |||||||| Sbjct: 35893238 gcaagttccaacatggtgaattctcctgggtt 35893207
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 ||||||||| ||||| || ||||||||||||||||||||| ||| | ||| ||||| | Sbjct: 103294 cctgagcaacaaagttgctgacaacacggccatcatcaatgcacatgcgaggaccatatg 103353 Query: 549 tgttgaaaatcc 560 |||| ||||||| Sbjct: 103354 tgttaaaaatcc 103365
>gb|AY105704.1| Zea mays PCO089743 mRNA sequence Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||| ||||| ||||||||||| ||||||||| ||| | ||| ||||| Sbjct: 225 gcctgagcaacgaaattactgacaacacggccgtcatcaatgcacatgcgaggaccatat 166 Query: 548 gtgttgaaaatcctggcaat 567 ||||| || |||| |||||| Sbjct: 165 gtgttaaagatccgggcaat 146
>ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); catalytic AT3G53520 (UXS1) transcript variant AT3G53520.2 mRNA, complete cds Length = 1531 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 896 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 838
>ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); catalytic AT3G53520 (UXS1) transcript variant AT3G53520.1 mRNA, complete cds Length = 1529 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 896 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 838
>gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein (F4P12.220) mRNA, complete cds Length = 1666 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1030 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 972
>emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1608 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1020 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 962
>emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1648 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1074 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 1016
>emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 1017 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 959
>gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein (At3g53520) mRNA, complete cds Length = 1492 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 923 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 865
>gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS1) mRNA, complete cds Length = 1302 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 923 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 865
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaat 558 ||||||||||||||||| |||||||||| | ||| || || ||||| ||||||||||| Sbjct: 83848 aagttactaacaacacgcccatcatcaaggcacattctgggcccatatgtgttgaaaat 83790
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 |||| |||| |||||| || |||||||| ||||||||||| ||| || || ||||||| Sbjct: 18942 cctgcgcaacgaagttgctgacaacacgtccatcatcaatacacattcttggaccatagg 18883 Query: 549 tgttgaaaatcctggcaat 567 ||||||| ||||| ||||| Sbjct: 18882 tgttgaagatcctagcaat 18864 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatc 264 |||||||| ||||||||||| |||| | |||||||||| Sbjct: 19871 gcctttgtaatgtcaggctttctcttgtgagggtcatc 19834
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 |||| |||| |||||| || |||||||| ||||||||||| ||| || || ||||||| Sbjct: 105120 cctgcgcaacgaagttgctgacaacacgtccatcatcaatacacattcttggaccatagg 105061 Query: 549 tgttgaaaatcctggcaat 567 ||||||| ||||| ||||| Sbjct: 105060 tgttgaagatcctagcaat 105042 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtcatc 264 |||||||| ||||||||||| |||| | |||||||||| Sbjct: 106049 gcctttgtaatgtcaggctttctcttgtgagggtcatc 106012
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence Length = 108802 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 489 cctgagcaatgaagttactaacaacacggccatcatc 525 ||||||||| |||||||||||| ||||| |||||||| Sbjct: 42476 cctgagcaacgaagttactaacgacacgtccatcatc 42512 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 326 gcaagttccagcatggtgaattcacc 351 ||||||||||||||||| |||||||| Sbjct: 40939 gcaagttccagcatggtaaattcacc 40964
>ref|XM_785356.1| PREDICTED: Strongylocentrotus purpuratus similar to UDP-glucuronate decarboxylase 1 (LOC585531), mRNA Length = 1169 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 538 aggtccataggtgttgaaaatcctggcaa 566 ||||||| ||||||||||||||||||||| Sbjct: 141 aggtccaaaggtgttgaaaatcctggcaa 113
>ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 326 gcaagttccagcatggtgaattcacctgggtt 357 |||||||||| |||||||||||| |||||||| Sbjct: 980 gcaagttccaacatggtgaattctcctgggtt 949
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 326 gcaagttccagcatggtgaattcacctgggtt 357 |||||||||| |||||||||||| |||||||| Sbjct: 157696 gcaagttccaacatggtgaattctcctgggtt 157665
>dbj|AB182636.1| Oryza sativa (japonica cultivar-group) UXS-5 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1555 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| Sbjct: 1033 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 974 Query: 548 gtgttgaa 555 |||||||| Sbjct: 973 gtgttgaa 966
>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1404 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 326 gcaagttccagcatggtgaattcacctgggtt 357 |||||||||| |||||||||||| |||||||| Sbjct: 1040 gcaagttccaacatggtgaattctcctgggtt 1009
>dbj|AK122156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145O13, full insert sequence Length = 1734 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatag 547 |||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| Sbjct: 1107 gcctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatat 1048 Query: 548 gtgttgaa 555 |||||||| Sbjct: 1047 gtgttgaa 1040
>dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H12, full insert sequence Length = 805 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 326 gcaagttccagcatggtgaattcacctgggtt 357 |||||||||| |||||||||||| |||||||| Sbjct: 281 gcaagttccaacatggtgaattctcctgggtt 250
>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full insert sequence Length = 2387 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 326 gcaagttccagcatggtgaattcacctgggtt 357 |||||||||| |||||||||||| |||||||| Sbjct: 1858 gcaagttccaacatggtgaattctcctgggtt 1827
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 966 gcctttgtgatgtcaggctttctcttgtgagggtc 1000
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Plus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 ||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| | Sbjct: 144435 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 144494 Query: 549 tgttgaa 555 ||||||| Sbjct: 144495 tgttgaa 144501
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Plus Query: 489 cctgagcaatgaagttactaacaacacggccatcatcaatgttcatcctaggtccatagg 548 ||||||||| ||||| || ||||||||||||||||| ||| ||| | ||| ||||| | Sbjct: 17200300 cctgagcaacaaagttgctgacaacacggccatcatcgatgcacatgcgagggccatatg 17200359 Query: 549 tgttgaa 555 ||||||| Sbjct: 17200360 tgttgaa 17200366
>emb|BX822583.1|CNS0A63N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB50ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 451 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttcctctggcgagggtc 261 |||||||||||||||||||| |||| | ||||||| Sbjct: 92 gcctttgtgatgtcaggctttctcttgtgagggtc 58
>ref|NM_130333.1| Arabidopsis thaliana UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic AT2G47650 (UXS4) mRNA, complete cds Length = 1529 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 335 agcatggtgaattcacctgggttcccaatgttaa 368 ||||||||||||||||| ||||| |||| ||||| Sbjct: 1184 agcatggtgaattcaccggggttaccaaggttaa 1151
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 341 gtgaattcacctgggttcccaatgttaatgggtccagt 378 |||||||||| ||||| || ||||||||||||||||| Sbjct: 325162 gtgaattcactggggttgccgatgttaatgggtccagt 325125
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 335 agcatggtgaattcacctgggttcccaatgttaa 368 ||||||||||||||||| ||||| |||| ||||| Sbjct: 6513 agcatggtgaattcaccggggttaccaaggttaa 6546
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 335 agcatggtgaattcacctgggttcccaatgttaa 368 ||||||||||||||||| ||||| |||| ||||| Sbjct: 9563 agcatggtgaattcaccggggttaccaaggttaa 9530
>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA, complete cds Length = 1380 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 488 gcctgagcaatgaagttactaacaacacggccatcatcaatg 529 |||||||||| ||||| || |||||||||||||| |||||| Sbjct: 815 gcctgagcaacaaagttgctgacaacacggccatcgtcaatg 774 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 agttccagcatggtgaattcacctgggtt 357 ||||||||||||||||| ||||| ||||| Sbjct: 974 agttccagcatggtgaactcaccggggtt 946
>gb|BT022016.1| Arabidopsis thaliana At2g47650 gene, complete cds Length = 1480 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 335 agcatggtgaattcacctgggttcccaatgttaa 368 ||||||||||||||||| ||||| |||| ||||| Sbjct: 1103 agcatggtgaattcaccggggttaccaaggttaa 1070
>gb|AY619951.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 2 mRNA, complete cds Length = 1519 Score = 44.1 bits (22), Expect = 0.55 Identities = 91/114 (79%) Strand = Plus / Minus Query: 337 catggtgaattcacctgggttcccaatgttaatgggtccagtgttgtctccattcatcag 396 |||||| ||||||||||| || |||||||| || || || ||||| || || | ||| || Sbjct: 1031 catggtaaattcacctggatttccaatgttgattggccctgtgttttccccttccattag 972 Query: 397 cttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgtgt 450 | ||||| ||||| |||||||||| ||| || ||||| || | ||||||||| Sbjct: 971 ccgaataagcccattaaccatatcagaaacataacagaaactgcgagtctgtgt 918
>ref|XM_476928.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 gccatcatcaatgttcatcctaggt 541 |||||||||| |||||||||||||| Sbjct: 424 gccatcatcagtgttcatcctaggt 400
>gb|AC149635.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence Length = 96718 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 500 aagttactaacaacacggccatcatcaatgttcatcctaggtccataggtgttgaaaatc 559 ||||| ||||||||||| || |||||||| |||||| || ||||| |||||||| ||| Sbjct: 82081 aagttgctaacaacacgaccgtcatcaatacacatccttggcccataagtgttgaagatc 82022 Query: 560 c 560 | Sbjct: 82021 c 82021
>gb|AY023547.1| Oryza sativa microsatellite MRG5872 containing (TGG)X8, closest to marker RZ272, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 gccatcatcaatgttcatcctaggt 541 |||||||||| |||||||||||||| Sbjct: 92 gccatcatcagtgttcatcctaggt 68
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gcctttgtgatgtcaggcttc 247 ||||||||||||||||||||| Sbjct: 163613 gcctttgtgatgtcaggcttc 163593
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 517 gccatcatcaatgttcatcctaggt 541 |||||||||| |||||||||||||| Sbjct: 4692642 gccatcatcagtgttcatcctaggt 4692666
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 517 gccatcatcaatgttcatcctaggt 541 |||||||||| |||||||||||||| Sbjct: 10552 gccatcatcagtgttcatcctaggt 10576
>dbj|AK103069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P16, full insert sequence Length = 1393 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 gccatcatcaatgttcatcctaggt 541 |||||||||| |||||||||||||| Sbjct: 424 gccatcatcagtgttcatcctaggt 400
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 517 gccatcatcaatgttcatcctaggt 541 |||||||||| |||||||||||||| Sbjct: 100015 gccatcatcagtgttcatcctaggt 100039
>gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome 8, complete sequence Length = 180801 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gatcaactccttcacgttct 323 |||||||||||||||||||| Sbjct: 157934 gatcaactccttcacgttct 157915
>emb|AL136135.19| Human DNA sequence from clone RP11-301C18 on chromosome 6 Contains the 5'end of a gene for a novel protein (2410004N11RIK), the gene for a novel protein, the 5' end of a gene for a novel protein and a CpG island, complete sequence Length = 46699 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 tggcttctggacagtcagggcttc 477 ||||||||||| |||||||||||| Sbjct: 13241 tggcttctggagagtcagggcttc 13218
>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence Length = 167258 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 agcttcataagaccattgac 414 |||||||||||||||||||| Sbjct: 166392 agcttcataagaccattgac 166411
>gb|AC091643.6| Homo sapiens chromosome 18, clone RP11-727B4, complete sequence Length = 169944 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 agcttcataagaccattgac 414 |||||||||||||||||||| Sbjct: 68254 agcttcataagaccattgac 68273
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence Length = 193884 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ttggccttcttgggcactgc 144 |||||||||||||||||||| Sbjct: 153079 ttggccttcttgggcactgc 153098
>gb|AC079176.15| Homo sapiens X BAC RP11-325D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 ggacagtcagggcttcacca 481 |||||||||||||||||||| Sbjct: 163567 ggacagtcagggcttcacca 163548
>dbj|AB167397.1| Oryza sativa (japonica cultivar-group) UXS-1 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 490 ctgagcaatgaagttactaacaacacggccatcatc 525 |||||| | |||||| ||||||||||| |||||||| Sbjct: 883 ctgagcgacgaagttgctaacaacacgcccatcatc 848
>dbj|AK071034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I12, full insert sequence Length = 1604 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 490 ctgagcaatgaagttactaacaacacggccatcatc 525 |||||| | |||||| ||||||||||| |||||||| Sbjct: 978 ctgagcgacgaagttgctaacaacacgcccatcatc 943
>gb|AY108129.1| Zea mays PCO069672 mRNA sequence Length = 984 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ttgggctcccagtcaagaac 219 |||||||||||||||||||| Sbjct: 623 ttgggctcccagtcaagaac 604
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete sequence Length = 231197 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tatgagtatgctctggcaaa 84 |||||||||||||||||||| Sbjct: 208325 tatgagtatgctctggcaaa 208306
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 agttccagcatggtgaattc 348 |||||||||||||||||||| Sbjct: 372396 agttccagcatggtgaattc 372377
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete sequence Length = 159617 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ttggccttcttgggcactgc 144 |||||||||||||||||||| Sbjct: 53068 ttggccttcttgggcactgc 53049
>gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, complete cds Length = 3574 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gtctccattcatcagcttca 401 |||||||||||||||||||| Sbjct: 3434 gtctccattcatcagcttca 3415 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,512,369 Number of Sequences: 3902068 Number of extensions: 4512369 Number of successful extensions: 98601 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 98191 Number of HSP's gapped (non-prelim): 395 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)